retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2, snap_masked-scaffold272_size230267-processed-gene-1.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000006807 (supercontig:LSalAtl2s:LSalAtl2s382:146876:192943:-1 gene:EMLSAG00000006807 transcript:EMLSAT00000006807 description:"maker-LSalAtl2s382-augustus-gene-2.10") HSP 1 Score: 58.151 bits (139), Expect = 4.859e-9 Identity = 46/177 (25.99%), Postives = 86/177 (48.59%), Query Frame = 0 Query: 91 DNLAFYLISLAYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPIT-LWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSVVQNKRSPFSGSSALLICVGMVGLSFLLAGP-LFATATLEPLVNFESNPMVA------DILICRQEW 259 D LI L L V + G+ GN LV +AV + M++ N FI LAM+D+ +P T +W++ + W FG ++C++V+ Q + + +S + + IA DRY ++ + + + A + + +S ++ P + + P + E P +A D+ C+ +W Sbjct: 59 DKFETVLICLIAL-VFICGIIGNALVFIAVTTTKSMQSVTNIFIVNLAMADMLVMIFCVPPTVIWDVTN-TWIFGS---LMCRIVLYIQDISVSVSVLTLTFIAYDRYYAICRPLQFSSRKTKAAVXIAAIWTISAIIGIPNAISLEAVTPFDDEEQFPCLARDEIFFDLSSCKPKW 230
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000012081 (supercontig:LSalAtl2s:LSalAtl2s863:198955:217784:-1 gene:EMLSAG00000012081 transcript:EMLSAT00000012081 description:"maker-LSalAtl2s863-augustus-gene-1.25") HSP 1 Score: 56.225 bits (134), Expect = 1.790e-8 Identity = 68/340 (20.00%), Postives = 138/340 (40.59%), Query Frame = 0 Query: 100 LAYLTVILIGVSGNILVILAVVS-KAKMRNTHNFFITTLAMSDLFFCCISLPITLWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSVV--QNKRSPFSGSSALLICVGMVGLSFLLAGPLFATATLEPLVNFESNPMVADILICRQEWSSRTVRVAYKVGTCFFQFFLPIGFVMYTNMCIVLRL------------------SHRPPSQHRN--------------------------------LNERRKRTNQIIVSVTVVFFLSWLPLNTFRLLSEFGPAQL-HPLLGGREELTFGILNLLGATNACVNPLLYGYFNENFRNE 385 + Y+ I++GV N+ +L ++ K RN N F+ +LA++DL ++ P+ EL HY P C++ ++V+ S + + + ++R+ +V RS + +++ + + GLS +L P+ T ++ V + +N + + C S + A+ + F +P ++ ++ L + + S H N + +RK+ ++++ V V+FFL W P ++ + L +P + L F LL +ACVNP++Y ++ FR+ Sbjct: 64 VTYIICIILGVFWNLFTLLVMIKGDRKSRNATNLFLISLAVADLLLVTVAAPM---ELVHYFAPQFGSGGSGCKIAEYSRVLSAVASILNLLSVTLERFIVIVFPMRSRSLCTMTNSRRVLGAVWGLSLILTLPVLYTKSVYD-VYYANNVTIVKVTYCNDYDDS--LGFAFSIYQLVVVFIVPGNIILICYSFVIRELWKSTKRMASMTNHNSYTANRKRSSAHENSVYINQHHDDGGIGNDNKRSRHFHGNHRKREDVGAQRKQVIKMLICVVVLFFLCWGPRFIMEIIIKSKTQNLFYPSIYWIRVLLF----LLPFVHACVNPIIYIIMSKTFRSS 393
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000001649 (supercontig:LSalAtl2s:LSalAtl2s128:1686660:1689308:-1 gene:EMLSAG00000001649 transcript:EMLSAT00000001649 description:"maker-LSalAtl2s128-augustus-gene-16.10") HSP 1 Score: 54.6842 bits (130), Expect = 5.100e-8 Identity = 65/231 (28.14%), Postives = 102/231 (44.16%), Query Frame = 0 Query: 77 EEFQENIEGPASEDDNLAFYLISLAYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPITL---WELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSVVQNKRS-PFSGSSALLICVGMV-GLSFLLAGPLFATATLEPLVN--FESNPMVADILICRQEWSSRTVRV--AYKVGTCFFQFFLPIG--FVMYTNMCIVLRLS 296 EEF + GP + + I+ YL + + GV GN+ V +V M N+++ +L++SDL + LP L W+ Y W FG VLC+ + + S + I + +RY ++ S SG L + ++ +SFL A P FA T ++ F S + D C S+ + Y++ T F F P+G V+Y M I LR S Sbjct: 45 EEFLGQVLGPKNVGLRVLI-PITCMYLILFISGVLGNLAVCFVIVKNKSMHTPTNYYLFSLSISDLLILILGLPNDLTIYWQ--QYPWLFGE---VLCKGRSFVSEMTSYSSVLTIVAFSSERYLAICHPIYSHTMSGFKRTLRILCIIWTISFLFAIP-FALFTKVNYIDRPFHSGNYINDSAFCALLDSNVYPKSYPIYEISTFLF-FIYPMGSLAVLYLRMGIALRQS 267
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000000790 (supercontig:LSalAtl2s:LSalAtl2s112:613738:614100:-1 gene:EMLSAG00000000790 transcript:EMLSAT00000000790 description:"augustus_masked-LSalAtl2s112-processed-gene-5.2") HSP 1 Score: 50.447 bits (119), Expect = 6.488e-8 Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0 Query: 84 EGPASEDDNLAFYLISLAYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPITL--WELFHYRWPFG 164 E A E + + ++ + + V L+G+ GN+LV++ V +MRNT N I LA++D+ F +P T + L H WPFG Sbjct: 36 ESWADEMEKVISIVVPIFFSIVALVGLFGNLLVVMVVTFNKQMRNTTNLLILNLAVADILFIVFCVPFTATGYALPH-DWPFG 117
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000009433 (supercontig:LSalAtl2s:LSalAtl2s601:31744:33432:-1 gene:EMLSAG00000009433 transcript:EMLSAT00000009433 description:"augustus_masked-LSalAtl2s601-processed-gene-1.0") HSP 1 Score: 53.9138 bits (128), Expect = 1.068e-7 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0 Query: 112 GNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPIT-LWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSVVQNKRSP--FSGSSALLICVGMVGLSFLLAGP 230 GN++VI AV K+R N FI +LA +DL I LP + ++E+FH W FG + C + + V S + + I++DRY +V P S A L+ +G LSF++ P Sbjct: 44 GNMMVIAAVHMTQKLRGATNLFIVSLAWADLMLGIIVLPTSAMYEVFHI-WIFG---VHWCAIWLAVDVWMCTASILHLVVISLDRYIAVTHPVTYPNIMSSKRAKLLILGAWVLSFVICFP 161
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011964 (supercontig:LSalAtl2s:LSalAtl2s84:1368584:1370834:1 gene:EMLSAG00000011964 transcript:EMLSAT00000011964 description:"maker-LSalAtl2s84-augustus-gene-13.5") HSP 1 Score: 52.7582 bits (125), Expect = 2.711e-7 Identity = 41/136 (30.15%), Postives = 72/136 (52.94%), Query Frame = 0 Query: 97 LISLAYLTVILIGVSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPI-TLWELFHYRWPFGRDTL--VLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSV--VQNKRSPFSGSSALLICVGMVGLSFLL 227 LI++ I+I GN+LV+++ V + ++R NFFI +LA++D+ +S+P T++ L Y WP D L +LC L + +S + I +DR+ SV R+ +G+ + + V + +S LL Sbjct: 142 LIAIFLAICIVITTFGNLLVLVSFVVERQIRQPPNFFIASLAITDVLIGTVSMPFYTIYVLVGY-WP---DELGPMLCDLWLSVDYTVCLVSQFTVLSITIDRFCSVKFATQYRTWRTGNKIMAVVVTIWVVSALL 273
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003021 (supercontig:LSalAtl2s:LSalAtl2s171:196627:197691:1 gene:EMLSAG00000003021 transcript:EMLSAT00000003021 description:"augustus_masked-LSalAtl2s171-processed-gene-2.0") HSP 1 Score: 50.8322 bits (120), Expect = 6.979e-7 Identity = 40/141 (28.37%), Postives = 69/141 (48.94%), Query Frame = 0 Query: 101 AYLTVILIG-----VSGNILVILAVVSKAKMRNTHNFFITTLAMSDLFFCCISLPIT-LWELFHYRWPFGRDTLVLCQLVVCAQVVPLFMSSMAIGGIAMDRYRSVVQNKRSPF--SGSSALLICVGMVGLSFLLAGPLFA 233 YL ILI V GN L+I++V+ K + N+FIT+LA++D + +P + +E RW FG D C + V+ S + + I++DRY ++ P+ +G A ++ V + S +++ P A Sbjct: 30 GYLFAILISFGVATVLGNSLIIVSVLKKRSLHTATNYFITSLAIADFLVGLVVMPFSATYEAMDQRWIFGPD---WCDIWHSMDVLASTASILNLCVISLDRYWAITDPMTYPYKMTGKRAAILIVLVWVCSSVISFPAIA 167
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000000789 (supercontig:LSalAtl2s:LSalAtl2s112:585535:586017:-1 gene:EMLSAG00000000789 transcript:EMLSAT00000000789 description:"maker-LSalAtl2s112-augustus-gene-5.9") HSP 1 Score: 47.7506 bits (112), Expect = 7.947e-7 Identity = 27/85 (31.76%), Postives = 46/85 (54.12%), Query Frame = 0 Query: 319 SVTVVFFLSWLPLNTFRLLSEFGPAQLHPLLGGREELTFGIL-NLLGATNACVNPLLYGYFNENFRNEYKYIYRAMPWQRPSAAQ 402 +V ++F LSWLP++ LL + P+ +TF I+ ++L +N+CVNP+LY + +E FR + + + RPS Sbjct: 30 AVVLIFTLSWLPIHIILLLRSLNLYESTPM-----NMTFQIIAHILAYSNSCVNPILYAFLSEPFRRGFWAVITCI---RPSGPH 106
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|5921810|sp|O55057.1|PDE6D_MOUSE (RecName: Full=Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=GMP-PDE delta) HSP 1 Score: 242.276 bits (617), Expect = 1.760e-75 Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDA++GKILWQG ED+S+P EHEARVPKKILKC+AVSRE+NFSS E MEKFRLEQKV ++G+CLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VL GNV+IET+FFDDDL VSTSKVRLFYV Sbjct: 16 KLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSKVRLFYV 150
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|9087171|sp|Q9XT54.1|PDE6D_CANFA (RecName: Full=Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=GMP-PDE delta) HSP 1 Score: 241.506 bits (615), Expect = 3.847e-75 Identity = 111/135 (82.22%), Postives = 125/135 (92.59%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDA++GKILWQG ED+S+P EHEARVPKKILKC+AVSRE+NFSS E MEKFRLEQKV ++G+CLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VL GNV+IET+FFDDDL VSTS+VRLFYV Sbjct: 16 KLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV 150
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|3182973|sp|Q95142.1|PDE6D_BOVIN (RecName: Full=Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=GMP-PDE delta) HSP 1 Score: 241.121 bits (614), Expect = 4.752e-75 Identity = 111/135 (82.22%), Postives = 125/135 (92.59%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDA++GKILWQG ED+S+P EHEARVPKKILKC+AVSRE+NFSS E MEKFRLEQKV ++G+CLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VL GNV+IET+FFDDDL VSTS+VRLFYV Sbjct: 16 KLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSAEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV 150
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|5921809|sp|O43924.1|PDE6D_HUMAN (RecName: Full=Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=GMP-PDE delta; AltName: Full=Protein p17) HSP 1 Score: 241.121 bits (614), Expect = 5.063e-75 Identity = 111/135 (82.22%), Postives = 125/135 (92.59%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDA++GKILWQG ED+S+P EHEARVPKKILKC+AVSRE+NFSS E MEKFRLEQKV ++G+CLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VL GNV+IET+FFDDDL VSTS+VRLFYV Sbjct: 16 KLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV 150
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|74801467|sp|Q7PZ66.1|PDE6D_ANOGA (RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta) HSP 1 Score: 204.142 bits (518), Expect = 5.581e-61 Identity = 96/148 (64.86%), Postives = 118/148 (79.73%), Query Frame = 0 Query: 547 KKLFNGGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 +K+ NG ++NWM LRDAD+GKI+WQ N+D S P+ EHEA+VP KIL RAVSREINFS+VE ME FRL+QKVL++GR +EEW F+ G+V PN+TNTWQS IEAAPESQMMPA+VLNGNV IET F+D D +S S VRL+Y+ Sbjct: 10 EKILNG------FQINWMILRDADTGKIIWQENKDFSCPDVEHEAKVPVKILSLRAVSREINFSTVEAMENFRLDQKVLFKGRIMEEWFFEMGWVSPNTTNTWQSTIEAAPESQMMPAKVLNGNVTIETSFYDGDTLISKSVVRLYYI 151
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|223635545|sp|B0WS18.1|PDE6D_CULQU (RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta) HSP 1 Score: 202.986 bits (515), Expect = 1.514e-60 Identity = 94/139 (67.63%), Postives = 114/139 (82.01%), Query Frame = 0 Query: 556 KSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 + ++NW+ LRDAD+GKILWQ N+D S P+ EHEARVP KIL RAVSREINFS+VE ME FRL+QKVL++GR +EEW F+ G+V PN+TNTWQS IEAAPESQMMPA+VLNGNV IET FFD + +S S VRL+Y+ Sbjct: 13 REGFQINWLILRDADTGKILWQENKDFSCPDVEHEARVPIKILDLRAVSREINFSTVEAMENFRLDQKVLFKGRIMEEWFFEMGWVSPNTTNTWQSTIEAAPESQMMPAKVLNGNVTIETSFFDGETLISKSVVRLYYI 151
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|3183464|sp|Q18268.1|PDL1_CAEEL (RecName: Full=Phosphodiesterase delta-like protein) HSP 1 Score: 202.216 bits (513), Expect = 2.919e-60 Identity = 91/134 (67.91%), Postives = 113/134 (84.33%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFY 693 K+NWMNLRDA++GK+LWQ ED++ P+ EH+A VPK +LKCR VSREINF+S +EKFRLEQ+V +G +EEW FDFGFVIP+STNTWQ++IEAAPESQM P VL+GNVV+ET F+D DL VSTS+VRL+Y Sbjct: 25 KLNWMNLRDAETGKVLWQSTEDMADPKREHKAHVPKNLLKCRTVSREINFTSSVKIEKFRLEQRVYLKGTIIEEWYFDFGFVIPDSTNTWQNMIEAAPESQMFPPSVLSGNVVVETLFYDGDLLVSTSRVRLYY 158
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|223635547|sp|B3N7D5.1|PDE6D_DROER (RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta) HSP 1 Score: 201.06 bits (510), Expect = 6.093e-60 Identity = 91/143 (63.64%), Postives = 116/143 (81.12%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G + ++N+M LRDADSGKI+WQ N+D S P+ EHEARVP KIL+ RAVSREINFS++E ME FRL+QKVL++GR +EEW F+ GFV N+TNTWQS IEAAPESQMMPA+VLNGNV I+T F+D++ ++ S VRL+Y+ Sbjct: 9 GDRIQKGFQINYMILRDADSGKIIWQENKDFSAPDQEHEARVPVKILEMRAVSREINFSTIESMENFRLDQKVLFKGRIMEEWFFEMGFVGANTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNETLITKSVVRLYYI 151
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|223635549|sp|B4KG03.1|PDE6D_DROMO (RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta) HSP 1 Score: 200.675 bits (509), Expect = 8.407e-60 Identity = 89/143 (62.24%), Postives = 116/143 (81.12%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G + ++N+M LRDAD+GK++WQ N+D S P+ EHEARVP KIL RAVSREINFS++E ME FRL+QKVL++GR +EEW F+ GFV N+TNTWQS IEAAPESQMMPA+VLNGNV I+T F+D+++ ++ S VRL+Y+ Sbjct: 9 GDKIQKGFQINYMILRDADTGKVIWQENKDFSAPDVEHEARVPVKILDMRAVSREINFSTIESMENFRLDQKVLFKGRIMEEWFFEMGFVGANTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNEILITKSVVRLYYI 151
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Match: gi|74869766|sp|Q9VLJ0.1|PDE6D_DROME (RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=DmPrBP >gi|223635552|sp|B4Q785.1|PDE6D_DROSI RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta >gi|223635555|sp|B4NXG9.1|PDE6D_DROYA RecName: Full=Probable cGMP 3',5'-cyclic phosphodiesterase subunit delta) HSP 1 Score: 200.675 bits (509), Expect = 8.495e-60 Identity = 91/143 (63.64%), Postives = 115/143 (80.42%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G + ++N+M LRDADSGKI+WQ N+D S P+ EHEARVP KIL RAVSREINFS++E ME FRL+QKVL++GR +EEW F+ GFV N+TNTWQS IEAAPESQMMPA+VLNGNV I+T F+D++ ++ S VRL+Y+ Sbjct: 9 GDRIQKGFQINYMILRDADSGKIIWQENKDFSAPDQEHEARVPVKILDMRAVSREINFSTIESMENFRLDQKVLFKGRIMEEWFFEMGFVGANTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNETLITKSVVRLYYI 151
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|340724402|ref|XP_003400571.1| (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1 [Bombus terrestris] >gi|1366062318|ref|XP_024223813.1| retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1 [Bombus impatiens]) HSP 1 Score: 253.832 bits (647), Expect = 1.884e-77 Identity = 117/135 (86.67%), Postives = 130/135 (96.30%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 +VNWMNLRDAD+GKILWQGNED+S+PE EHEARVPK+ILKCRA+SREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLI+AAPESQMMPA +LNGNVVIET+FFDDDL VSTSKVRLFYV Sbjct: 13 QVNWMNLRDADNGKILWQGNEDLSVPEVEHEARVPKRILKCRAISREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIQAAPESQMMPANILNGNVVIETKFFDDDLLVSTSKVRLFYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|1126600946|ref|XP_019699949.1| (PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X2 [Harpegnathos saltator]) HSP 1 Score: 253.447 bits (646), Expect = 1.936e-77 Identity = 117/138 (84.78%), Postives = 131/138 (94.93%), Query Frame = 0 Query: 557 SNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 S + VNWMNLRDAD+GKILWQGNED+S+P+ EHEARVPKKIL+CRA+SREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLI+AAPESQMMPA VLNGNVVIET+FFDDDL VSTS+VRLFYV Sbjct: 2 STLNVNWMNLRDADNGKILWQGNEDLSVPDMEHEARVPKKILRCRAISREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIQAAPESQMMPANVLNGNVVIETKFFDDDLLVSTSRVRLFYV 139
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|751203378|ref|XP_011175205.1| (PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1 [Solenopsis invicta] >gi|769851328|ref|XP_011637099.1| PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Pogonomyrmex barbatus] >gi|826408557|ref|XP_012526651.1| PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Monomorium pharaonis]) HSP 1 Score: 253.832 bits (647), Expect = 1.966e-77 Identity = 119/143 (83.22%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G +VNWMNLRDADSGKILWQGNED+S+P+ EHEARVPKKIL+CRAVSREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLI+AAPESQMMPA VLNGNVVIET+FFDDDL VSTS+VRLFYV Sbjct: 5 GEDILKGFQVNWMNLRDADSGKILWQGNEDLSVPDVEHEARVPKKILRCRAVSREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIQAAPESQMMPANVLNGNVVIETKFFDDDLLVSTSRVRLFYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|926630282|ref|XP_013780825.1| (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X3 [Limulus polyphemus] >gi|1238865451|ref|XP_022248715.1| retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1 [Limulus polyphemus]) HSP 1 Score: 253.447 bits (646), Expect = 2.770e-77 Identity = 119/135 (88.15%), Postives = 128/135 (94.81%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDAD+GK+LWQG ED+S P+ EHEARVPKKILKCRAVSREINFSSVE MEKFRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VLNGNVVIET+FFDDDL VSTSKVRLFYV Sbjct: 15 KLNWMNLRDADTGKVLWQGTEDLSKPDVEHEARVPKKILKCRAVSREINFSSVETMEKFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPANVLNGNVVIETKFFDDDLLVSTSKVRLFYV 149
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|1069694616|ref|XP_018306798.1| (PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Trachymyrmex zeteki] >gi|1070186566|ref|XP_018350797.1| PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Trachymyrmex septentrionalis] >gi|1070202943|ref|XP_018370310.1| PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Trachymyrmex cornetzi] >gi|1070596898|ref|XP_018395652.1| PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Cyphomyrmex costatus]) HSP 1 Score: 253.447 bits (646), Expect = 2.819e-77 Identity = 118/143 (82.52%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G +VNWMNLRDADSGKILWQGNED+S+P+ EHEARVPKKIL+CRAVSREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLI+AAPESQMMPA +LNGNVVIET+FFDDDL VSTS+VRLFYV Sbjct: 5 GEDILKGFQVNWMNLRDADSGKILWQGNEDLSVPDVEHEARVPKKILRCRAVSREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIQAAPESQMMPANILNGNVVIETKFFDDDLLVSTSRVRLFYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|1009526541|ref|XP_015912772.1| (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Parasteatoda tepidariorum]) HSP 1 Score: 253.062 bits (645), Expect = 3.448e-77 Identity = 117/135 (86.67%), Postives = 129/135 (95.56%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 K+NWMNLRDADSGK+LWQG+ED+S P+ EHEARVPKKILKCRAVSREINFSS+EPMEKFRLEQ+VL++GRCLEEW FDFGFVIPNSTNTWQSLIEAAPESQMMPA VLNGNV+IET+F+D DL VSTSKVRLFYV Sbjct: 13 KLNWMNLRDADSGKVLWQGSEDLSKPDVEHEARVPKKILKCRAVSREINFSSIEPMEKFRLEQRVLFKGRCLEEWFFDFGFVIPNSTNTWQSLIEAAPESQMMPANVLNGNVIIETKFYDGDLLVSTSKVRLFYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|817065225|ref|XP_012254394.1| (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Athalia rosae]) HSP 1 Score: 253.062 bits (645), Expect = 3.522e-77 Identity = 118/143 (82.52%), Postives = 132/143 (92.31%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G +VNWMNLRDADSGKILWQGNED+S+PE EHEARVPKKIL+CRAVSREINFSSVEPME+FRLEQKVL++GRCLEEW F+FGFVIP+STNTWQSLIEAAPESQMMPA VLNGN+VIET+FFDDDL +STS+VRLFY+ Sbjct: 5 GEEILKGFQVNWMNLRDADSGKILWQGNEDLSVPEVEHEARVPKKILRCRAVSREINFSSVEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPSSTNTWQSLIEAAPESQMMPANVLNGNLVIETKFFDDDLLLSTSRVRLFYI 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|1339040891|ref|XP_023708891.1| (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1 [Cryptotermes secundus]) HSP 1 Score: 253.062 bits (645), Expect = 3.833e-77 Identity = 119/143 (83.22%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G +VNWMNLRDAD+GKILWQ NED+S+PE EHEARVPKK+LKCRAVSREINFSSVEPMEKFRLEQK+L++GRCLEEW F+FGFVIPNSTNTWQSLIEAAPESQMMPA VLNGNVVIET+FFDDDL VSTS+VRL+YV Sbjct: 5 GEDILKGFQVNWMNLRDADTGKILWQLNEDLSVPEIEHEARVPKKVLKCRAVSREINFSSVEPMEKFRLEQKILFKGRCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPANVLNGNVVIETKFFDDDLLVSTSRVRLYYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|746869159|ref|XP_011065728.1| (PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Acromyrmex echinatior] >gi|332017815|gb|EGI58476.1| Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Acromyrmex echinatior]) HSP 1 Score: 253.062 bits (645), Expect = 4.308e-77 Identity = 118/143 (82.52%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 552 GGTFKSNVKVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 G +VNWMNLRDADSGKILWQGNED+S+P+ EHEARVPKKIL+CRAVSREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQSLI+AAPESQMMPA +LNGNVVIET+FFDDDL VSTS+VRLFYV Sbjct: 5 GEDILKGFQVNWMNLRDADSGKILWQGNEDLSVPDIEHEARVPKKILRCRAVSREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSLIQAAPESQMMPANILNGNVVIETKFFDDDLLVSTSRVRLFYV 147
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Match: gi|1059863936|ref|XP_017798738.1| (PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [Habropoda laboriosa]) HSP 1 Score: 252.677 bits (644), Expect = 5.269e-77 Identity = 118/135 (87.41%), Postives = 129/135 (95.56%), Query Frame = 0 Query: 560 KVNWMNLRDADSGKILWQGNEDVSMPEAEHEARVPKKILKCRAVSREINFSSVEPMEKFRLEQKVLYRGRCLEEWNFDFGFVIPNSTNTWQSLIEAAPESQMMPARVLNGNVVIETRFFDDDLEVSTSKVRLFYV 694 +VNWM LRDADSGKILWQGNED+S+PE EHEARVPKKILKCRAVSREINFSS EPME+FRLEQKVL++GRCLEEW F+FGFVIPNSTNTWQS+I+AAPESQMMPA +LNGNVVIET+FFDDDL VSTSKVRLFYV Sbjct: 13 QVNWMILRDADSGKILWQGNEDLSVPEVEHEARVPKKILKCRAVSREINFSSAEPMERFRLEQKVLFKGRCLEEWFFEFGFVIPNSTNTWQSVIQAAPESQMMPANILNGNVVIETKFFDDDLLVSTSKVRLFYV 147 The following BLAST results are available for this feature:
BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold272_size230267:219582..229790- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold272_size230267-processed-gene-1.9 ID=snap_masked-scaffold272_size230267-processed-gene-1.9|Name=retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=10209bp|location=Sequence derived from alignment at scaffold272_size230267:219582..229790- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'retinal rod rhodopsin-sensitive cgmp 3 -cyclic phosphodiesterase subunit delta isoform x2' has the following synonyms
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