abc transporter, snap_masked-scaffold2803_size12270-processed-gene-0.3 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	snap_masked-scaffold2803_size12270-processed-gene-0.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 249.595 bits (636), Expect = 1.682e-74
Identity = 183/587 (31.18%), Postives = 294/587 (50.09%), Query Frame = 0

Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQIL------ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDAN-GTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAG-SIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            Y   +   +I A  S+I    F+I   +L+G  ++VV +  +  V S   E  H   L       L+++ F  +A +S+    Y+     L + + A +R + +  +  Q + FF+E  TG++V+ L+ DV + +      +  G     Q    ++++    + +SP +       +P +I G  Y       L    + +V   ++  +  I  I T++ F  E  E E   +E     D N         F       + +  L T   GG+   +  L  G     +   Q +   +T ++       + MAS  RI   ++    I   G       +  G V F  + F Y  R   A ++DFS+ +P   T+ALVG +G GK+T+  LL RFY    G S+++DG++I DL  S LRG AIG+++QEP LF  S+ +NI YG P A+   +  AA+ A   +F+   P G  T +GERG+ +SGGQ+QR+A+ARALLK+P +L+LDEATSA+D E+E  +Q +L +L+KGRT ++IAHRLST+ +A+ I V+  G + E G H   L  KG  +S+ + Q
Sbjct:   95 YITPHFHYLICAVCSAIAVAYFNIKIPLLLGDIVNVVSSYISETVLS---EMRHDNFLREMKEPTLSMIKF--YAAQSICTIAYIYSLACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSM----YMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTH-AALKRKGGIYSRLIEQ 671

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 219.935 bits (559), Expect = 4.945e-62
Identity = 133/356 (37.36%), Postives = 199/356 (55.90%), Query Frame = 0

Query:  211 TIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTL-NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANG----TVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            T+K F +E  E ++  +    Y  A+ +    S + +   + A+ +  L   ++   K + NG L VG   ++  L  +L  PL  L        +++   + +  L+ T   I     AT  +  N     +++F  V F Y          S  V  G T+A+VG +GSGKSTL++LL RFY  Q GSIK+   +IN++ L  LR  I  V Q+  LF  +I  NI YG+   S E +   A+ AE    I   PQG  T VGERG+ LSGG++QR+A+ARA LKD  +++ DEATS++D+ TE  I ++L+R+  G+T I+IAHRLSTVVHA+ I V++NGK++E+G H+ LL
Sbjct:  232 TVKYFNNEAYECQQYDKSLLKYETASLKTTE-SLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 201.83 bits (512), Expect = 2.539e-56
Identity = 107/237 (45.15%), Postives = 154/237 (64.98%), Query Frame = 0

Query:  331 RASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            +A    G ++F  V F Y  R     +   S E   G TLALVG +G GKST+I+L+ RFY    G + +DG DI  L    LR  IG V QEP LFE SI++NI  G   + S + I    + A A++FI+RLP+   T VGE+G LLSGGQ+QR+A+ARAL+++P +L+LDEA+SA+D+++E  +Q +L +  KGRT I++AHRLST+  A+ I+V+ +G  V+ G H++L + K
Sbjct:  237 KAPPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNK 473

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 175.252 bits (443), Expect = 1.288e-46
Identity = 176/604 (29.14%), Postives = 280/604 (46.36%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASS-IINKLFDIAPEILIGIAIDVVVNQD--TSFVASFGFETAHQQILALAVLTFFIWAGESL---------FQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVI----IWGAFYFLRRASPLYADVRERVGLLSSR--------LQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTF------VLGGFKTLNGELGVG-AYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTID---IRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP--KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            M Y +     +++A +S  +I +  +    +L+    D V+  +  T    +   +  +Q I+   V    I+ G  L         F + YL      AQ L   M     E + +  M FF+    G ++  L  D++ L+  +       I  F+ V         LS LI ++  +P+ +I    I   ++F++R   +Y     ++  L S             + G ATI+++     ++     ES +  D N++A     VS+ ++ V R+ V+ G L  F      VLG      G +G+  +Y + V  T  L W L  +A  +   E  + +  RI        +   I ++          G +SF     RYR G    +++ S+++ GG  + +VG TG+GKS+    + R      G+I +DGVDI  L L +LR  I  + Q+P LF GS+R N+   DP  + +   I  A   +    FI+ L  GL   V E G  LS GQRQ + LARALL+  +VL+LDEAT+AVD ET+  IQ+++R   K  TVI IAHRL+T++   +I+V+ NG+ VE G    LLA K
Sbjct:  974 MHYVKNMSIILVVACSSCFVIYQALNTLSNVLLAWWSDAVMKIEVRTGLNDNRTLDEINQDIMDXQVYYLSIYGGYCLGQGIVVVMGFVFMYLAC-MEAAQRLHNQM----LESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGV---------LSSLIVVMVTTPVFIIPASLIIICYFFIQR---IYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYG----QSSTFISESESKVDDNQKANFPATVSNRWLAV-RLEVV-GNLIVFTAALLAVLGRDSLSPGLVGLSVSYALAV--TASLNW-LVRMASEV---ETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADK 1545

HSP 2 Score: 105.531 bits (262), Expect = 9.173e-24
Identity = 83/308 (26.95%), Postives = 156/308 (50.65%), Query Frame = 0

Query:  281 VLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRAS--DANGTVSFAQVGFRYRAGGAG--IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY-----GDPKASL-EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQ----RSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            V + L   L +PL+ L   I     A  S +RI   +++  +I +E    + +  D    ++  +   ++ +      + D S+++  G+ +A+VG  GSGKS+L+  +L      +G I +             RG+I + +Q+ ++   S+++NI +     GD    + EA  L +        ++ LP G  T +GE+GI LSGGQ+QR++LARA+     + +LD+  SAVD+     I      S   + K +T +M+ H ++ +   ++I+V+ +G++ E G +  LL  KG + ++++VQ
Sbjct:  577 VCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSE-EIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITV-------------RGSIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSD-------LDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAF-AEFIVQ 862

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12")

HSP 1 Score: 167.548 bits (423), Expect = 5.368e-46
Identity = 126/434 (29.03%), Postives = 213/434 (49.08%), Query Frame = 0

Query:   88 AQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAF---------IPVIRMAVLAGFLCT---FVLGGFKTL---NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEAT 503
             Q + A +R   +  + +Q   FF+   TG+LV  L+ D   + + L    +  ++  +  +A G +  ++SP +AL+  S +P +   A +  ++   +  + +  +   +   Q  I  I T+++F  E  E+    ++ +   D   +   + + F         + ++ +    GFL T     +G   +    +G +G+G  GV  F  + +               +A+ +  RI  ++D T  +  +         NG ++F +VGF Y  R   +  +  ++ +     LA+VG+    KSTL  LLLR Y    G + +DG DI +L  + LR  IG V QEP LF G+I++NI YG + K   E I  AA+++ A +FI   P    T VGERG+LLSGGQ+QR+A+A A+LK+PQ L+LDEAT
Sbjct:   62 GQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIM---------------KALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 165.236 bits (417), Expect = 2.919e-43
Identity = 123/406 (30.30%), Postives = 203/406 (50.00%), Query Frame = 0

Query:  185 SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA--IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGEL-GVGAYGVLV----FLTQRLLWPLTSLAQTIDLFERAMASTRRILGL--LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTL-LAAKGHYHSQWMVQTGG 577
            SP+Y+   E           ++ G+++I+++ ++     +   ES    D N+R    ++ +     +R+  + G LC F        N EL G G  G+++     LTQ L W    L +     E  + +  R+     LD   + R     +    + G V F     RY+A    + +  +  + GG  + +VG TG+GKS+L   L R   A  G I +DG DI+ L L +LR ++  + QEP LF G++R N+   DP+ +     I          E+I  L  GL+ ++ E G+ LS GQRQ + LARALL+  ++L+LDEAT+AVD ET+  IQ ++R      T++ IAHRL T++  ++I+V+  G ++E G+ + L + +   +HS  M+   G
Sbjct: 1016 SPIYSHFSE-----------SLNGLSSIRAYGAQS----KFILESINKIDTNQRCNYPSIIANRWLAMRLETI-GNLCIFGXAILTMTNPELVGPGKVGLVISYALILTQNLNW----LXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHS--MINAAG 1396

HSP 2 Score: 110.923 bits (276), Expect = 1.437e-25
Identity = 72/252 (28.57%), Postives = 123/252 (48.81%), Query Frame = 0

Query:  325 DEGTATRASDANGTVSFAQVGFRYRAGGA--GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRR----LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            D+G A    D N         F++    +   + + ++ +  G+  A+VG  GSGKS+LI  +L     ++G +++             +G I +V QE ++   S+++NI +G P         LE   L          +  LP G  T +GERGI LSGGQRQR++LARA+  D  V + D   SA+D++   ++  ++      + K +T +++ H +S + H   I V+  G+I+ +G +  LL  K
Sbjct:  548 DQGDAIVIRDGN---------FKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRI-------------KGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYD-------LSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEKK 770

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2")

HSP 1 Score: 156.377 bits (394), Expect = 2.778e-40
Identity = 93/257 (36.19%), Postives = 141/257 (54.86%), Query Frame = 0

Query:  322 DIRDEGTATRASDANGTVSFAQV----GFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKA--SLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK-GHYHSQW 571
            D+R  G   +       + F  V     F YR      + FS+E+P    + + G +GSGKSTL+  ++R      GSI ++G++IN +PLS LR  +  + Q+  LF G+IR N+   DP+   S E I     +A+  + +   P GL T V E G   S GQRQ L + +ALL+ P+V++LDE+TSA+D   E A+  +L    +  T+I +AHRLS +V  ER++V+  G+I+E GN   LL    G + + W
Sbjct: 1630 DVRVSGDFLQNDSEGLIIRFNSVCLAPSFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNL---DPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALW 1883

HSP 2 Score: 100.138 bits (248), Expect = 4.734e-22
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 0

Query:  355 IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP---KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNE-TEAAIQRSLRR--LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQG 555
            ++  ++E+  G+   ++G +GSGK+ LI  L+       GS+K +  D            +  + Q P+L   +I+DNI  G P   K   + I     Q +    I+ LP G  T +GERG+LLSGGQRQRLA+AR L        +D   S++D++ T    +  + +  L + RTV +   RL  +  A+ IV + +G I  QG
Sbjct:  745 LQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPD-----------TVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTD----IDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQG 936

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 152.14 bits (383), Expect = 7.454e-39
Identity = 148/584 (25.34%), Postives = 255/584 (43.66%), Query Frame = 0

Query:   12 ILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILA-LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLD-------GGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRR-----ASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVI--------RMAVLAGFLCTFVLGGFKTLN------GELGVGAYGVLVFLTQRLLWPL---TSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAW--EFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562
            ILA +  II+++      + + +  D   N D  +         H  I A L V   FI    +L     L+       D    +    ++ + +  M FF+    G ++     D+  L+  +         G    I   V++I++    F +  L   + +  I ++   +   L+R      SP+Y           S     + GI T+++++           E A Y++  RR         PVI        R+ ++  F+  F    F  L+      G+LG+     L  +T  L W +   + L   I   ER    + +     +   ++ ++     +    G ++   +  +YR     +  D +V +  G  + +VG TGSGKSTL   L R     +G I +DGVDI  + L  LR  +  + Q+P LF G++R N+   DP    + + L      A+  +F++    GL   + E G  +S GQRQ + LARALL+  +VL++DEAT+AVD+ET+  IQ++++   +  TV+ IAHRL TV+   +I+V+ +G I+E  +   LL+
Sbjct: 1437 ILAFSFFIISQILATGSSVWLSVWSDAKNNTDIYY---------HLGIYAGLGVSNIFISTAGTLILSLSLL-------DASRILHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIAT-VTIISINVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIY-----------SHFGETLSGINTVRAYS----------LEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFI-IFASALFSVLSRDTITPGQLGLNVSSSLA-ITSILSWVIRMYSDLENNIVAVERIKEYSNK---ESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972

HSP 2 Score: 98.5969 bits (244), Expect = 1.644e-21
Identity = 64/215 (29.77%), Postives = 110/215 (51.16%), Query Frame = 0

Query:  356 EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSL---RRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            +D S++V  G  +A++G  GSGKS+LI  LL       G +       N +   E+ G++ +  Q  ++   S++DNI +G           L+A +L +        +E  P G  T +GE+GI LSGGQ+QR++LARA+     +  LD+  + VD+     +   +     L +G+T I++ H LS +   + I  + +G+I E+G +  L+
Sbjct: 1165 KDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESD-------MEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELM 1362

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 150.599 bits (379), Expect = 2.008e-38
Identity = 142/495 (28.69%), Postives = 228/495 (46.06%), Query Frame = 0

Query:   91 LQADMRLNA--YEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLI-QVF-----VSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRA-----SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGL----LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562
            L A M+++    E++ R  + FF+    G ++   + D++     L      +I Q F     + +I +   +F++  L A++ ++ I          ++R      SP+Y+   E            + GI TI++F   G+       E+    D N +      +SS ++ V R+  L   L  FV     T  G    G  G+ +     +   L  L       E  M S  RI        +   D+ +        + +G + F     RYR G    ++  +  +  G  + +VG TG+GKS+L   L R      GSI +DG +I  L L +LR  I  + Q+P LF GS+R N+   DP  +     I +A + +    F+  L  GL+ +V E G  LS GQRQ + LARA+L+  Q+LVLDEAT+A+D ET+  IQ ++R   K  TV+ IAHR++T++ + RI+V+  G I E  +   LLA
Sbjct: 1029 LNASMKIHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPIYSHFAE-----------TLTGIPTIRAF---GM-VHHFIDENVNKIDFNAKCYFPTVISSRWLAV-RLETLGNILVIFVALFSITSRGTTDPGMVGLSLSYALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPE-HGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL---DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLA 1503

HSP 2 Score: 100.523 bits (249), Expect = 2.974e-22
Identity = 74/255 (29.02%), Postives = 121/255 (47.45%), Query Frame = 0

Query:  330 TRASDANGTVSFAQVGFRYRA--GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG---DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-----EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            +  S  +  V    V   +    G   +ED  +++  G+ +A+VG  GSGKS+L+  +L       GSI +DG  I             +  Q+P+L   ++R+NI +G   + K     I   A   +    ++ LP G  T +GERGI LSGGQ+ R++LAR    +  + +LD+  SAVD        E  I  S   L K +T I + H    +   ++I+V+ NG I E G +  L+  +    +Q+++ 
Sbjct:  608 SHESQGSHAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPD----LDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVIS-SQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLIN 844

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 147.517 bits (371), Expect = 2.348e-37
Identity = 132/480 (27.50%), Postives = 220/480 (45.83%), Query Frame = 0

Query:  105 RQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRAS--PLYADVRERVGLLS-----SRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGE-LGVGAYGVLVF----LTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD--ANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKAS------LEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAA 563
            R  + FF+    G ++   + D   ++  L    N  +     V     V  Y  P I L+   P+     G FY+  +    P   D++ R+  +S           + G+  I++  S+  +   L  E     +   R  A S++    IR+  L G +  F +     +N E +  G  G+ V     +T RL   + S  +T    E+ + +  R    +D   +    G      +    G V F  +  RY+     +    + +      + +VG TG+GKS+LI  L R  S   G I +DG+ I  LPL + R     + Q+PF+F G+IR N+   DP A        ++I L+      + F      GL T +G+ G  LS GQ+Q L LARA++   +V+ +DEAT++VD ET+  I+  L+     +TVI IAHR+ TV++++RI V++NG+I+E+G  + L+ +
Sbjct:  984 RAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPWI-LIVLLPL-----GLFYYEIQCKYRPGSRDLK-RISSVSLSPIYEHFNETVHGLKIIRA--SKASQRFLLENEELVECNQKARYAAFSASLWLEIRLQ-LIGSIVVFSIALISVINFESVDAGLVGLAVSYALGMTXRLAEVVVSFTET----EKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELWDSIKLSYLYNIIYSFGS---SGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKS 1443

HSP 2 Score: 87.0409 bits (214), Expect = 5.410e-18
Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 0

Query:  322 DIRDEGTATRASDANGT----VSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVD-NETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKI--VEQGNH 557
            + +DE T  +AS    T    +   +  F +      + +  V +     + ++G  GSGK+T +  +L     Q+G I +        PLS     I +V Q P++   SIRDNI +G+     +   +        +F + L +G HT  GE+G  LSGGQ+ R+ALARA+ +D  + ++D+  S++D N         +  L K +T I+  H    +  A  ++ + +G+   V+Q  H
Sbjct:  615 EYKDENT--KASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISVRD------PLS----GIAYVQQVPWIQNKSIRDNILFGEMYIHGKYTKVIKACCLDHDF-KHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844

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BLAST of abc transporter vs. SwissProt
Match: gi|1176951|sp|P45861.1|YWJA_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YwjA)

HSP 1 Score: 359.762 bits (922), Expect = 3.364e-116
Identity = 206/580 (35.52%), Postives = 322/580 (55.52%), Query Frame = 0

Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVV-NQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAV---LAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            Y + Y+    L   S+I   L +++  +++   ID ++  +D               I+A ++  F ++A  S  QY        L  +++ DMR + ++H+Q+ S  F++   TG L++ L +D+  +      G  DL    ++++    V  +++  +ALL F  +P++IW A YF ++ +  +  + + +G  S+R++NNIGGI  +++F +E  E ER      A  +   R   +SS  I     ++   L  F+  FVL  G +  + G L  G +   V LT  L  P+  +   I+++ R +A  +  + L++T  DI+D   +   S   G + +  V F Y      + D ++ +  G T+A VG +G+GKSTL  LL RFY A  G I +DG+ I D+ LS LRG IG V Q+ FLF G++R+NIAYG   AS E I  A +QA   E +  +P GL T +GERG+ LSGGQ+QRL++AR  LK+P +L+LDEATSA+D ETEAAIQ++L+ L++GRT ++IAHRL+T+  A+RIVVV N  I EQG H  L+ A G Y      Q G
Sbjct:    8 YYKPYKTLFFLDFFSAIAGGLMELSFPLIVNYFIDTLLPGRDWGL------------IIATSIGLFAVYALSSALQYIVTYWGHMLGINIETDMRKSLFDHLQKLSFKFYDNNKTGTLMSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFGVMLFINWQLALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQAFGNEAFEKERF-----AVNNQRFRVTKLSSYKIMAKNGSISYMLTRFVTLFVLLCGTWFVIRGSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKDVSGLKGNIRYKHVSFGYDDHHNVLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGRHQDLIEAGGLYSRLHQAQFG 570

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BLAST of abc transporter vs. SwissProt
Match: gi|226693608|sp|O31707.3|YKNU_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknU)

HSP 1 Score: 320.472 bits (820), Expect = 6.213e-101
Identity = 174/481 (36.17%), Postives = 267/481 (55.51%), Query Frame = 0

Query:   95 MRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRY-RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            +R   YE +QR S  +++   TGDL++ L  DV  L  FL  G  +LI+  + V    +V FY S  + L+  + +P +    + F +R  P +  +R+    L++++Q NI GI T+KS + E  +     + +A Y     +  ++ SA+ P++        +     GG+  +  +L  G       L   ++WP+ +L   I++F +A AS  R+L +L+   DI D   A       G V F  V   Y +     + + S E   G  + L+G TGSGKS++ +LL RFYS   G I +D   I D  L  LR  IG V QE FLF  +IR NI+YG P AS+E +  AA++A+A  FI  LP G  T +GERG+ LSGGQ+QR+A+ARA+  +P +L+LD+ATSAVD +TE +IQ +L+ + K RT  ++AHR+S++ HA+ I+V   G+I E+G H  LL   G+Y   + +Q
Sbjct:   91 LRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPFLAVAVYRFDKRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDILEKEEDITDHPHALHKQKLTGDVHFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPDASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYYKKIYDLQ 571

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|81815540|sp|O31708.1|YKNV_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknV)

HSP 1 Score: 320.857 bits (821), Expect = 8.277e-101
Identity = 198/581 (34.08%), Postives = 307/581 (52.84%), Query Frame = 0

Query:    1 MRYARGYRRRVI-LASASSIINKLFDIAPEILIGI-AIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVL---WRN-LAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYAD--------ANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            + Y + YR+ ++ L+  + +I     +   ILIG+  +D  +    S                L +   FI +G  +  Y   VL   W N L Q +  D+R + + H+QR S  FF++RS G ++  + +D+N L+     G  +L+   + +  V  + F LSP + +     +P++ + +    ++    +  VR +   L+S L  +I GI   ++FT E        +E+ AY D        + R A   ++ F P++ M    G       G    +N  + +G +    F       P++ L Q  +     MAS+ RI   LD   +++++  A      NG +SF +V F Y      +   S  +P G+TLALVG TGSGK+T+  L+ RFY A  G+IK+DG+ I DL L+ LR  I  V Q+ F+F G+I +NI +G P AS E +  A+Q   A EFI  L +G  T V ERG +LS GQRQ ++ ARALL DP +++LDEAT+++D ETE  IQ++L+ L KGRT +MIAHRLST+  A+RI+V+ +G+ +E+GNHD LLA  G Y
Sbjct:   34 LSYVKPYRKTILPLSFLTVLIGTAVKLVIPILIGVYVLDQAITGRNS---------------ELLIQLIFIISGLYVLNYAANVLRIRWMNQLGQHVIYDLRQHLFTHVQRLSHRFFDQRSAGSILVRIMNDINSLQELFTSGVINLLTDLLLLAGVIIILFTLSPELTIAIMVTLPIMFFISTSLRKKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAFTQE--------EENMAYFDGVNQENYESWREATRKNAMFRPLVEMTNAIGTAVLIWYGATLIMNETITIGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEQPNVKEKPNAIHNEKINGEISFEEVEFSYDEKRKALHAVSFSIPAGSTLALVGHTGSGKTTIANLISRFYDAAGGTIKIDGIPIKDLSLASLRSQISIVLQDTFIFSGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSVLSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIY 591

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|67468754|sp|Q6AJW3.1|MSBA_DESPS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 310.457 bits (794), Expect = 2.702e-97
Identity = 187/522 (35.82%), Postives = 281/522 (53.83%), Query Frame = 0

Query:   58 QILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLW--PLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            QIL L ++  F   G  +  Y Y ++   + Q +  D RL  + H+ RQS+ FF    TG L++ +  DV  +++ +      L++ F  VI +  V FY++  +AL+ F  IP+       F +    L    +E    +S+ L   I G   +K+F  E  E ER  ++         +         P+  M ++ GF    ++  GG + +NG    G +    FLT  +    P+  ++Q     ++ +AS +R+  +LD   +I D+  AT  +    ++ F  V F Y  G   I    +++VP G  LA+VG +G GK+TL  L+ RF   Q GSI +DG DI D+  + LR  I  V+Q+  LF  +IR+NIAYG    + E I  AA+ A A  FIE LP G  TA+GE G  LSGGQRQR+++ARALL D  +L+LDEATSA+D E+E  +Q++L  L + RT  +IAHRLST+ +A RIVVV  GKIVE+G+H+ LL  +G Y   + +Q
Sbjct:   59 QILPLIIIAIFFTKG--VLYYTYAIILERVGQSIIRDFRLKIFAHIHRQSLSFFHNTPTGTLISRVLSDVALMQQAVSTVIIQLLRDFFQVIFLLGVIFYMNWKLALICFLIIPLAAIPIVKFGKIFRKLSTKTQEETAEVSNMLHETISGSRIVKAFCREDYEVERFHRQVETLFTITMKNAKYRVFQSPL--MEIIGGFAVAGIIWVGGSEVINGSATPGTF--FAFLTAMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLAPFKESIEFHDVSFSY--GTEKILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITIDGTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTEEEIRRAAKAAHALTFIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQKALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLKLEGEYQLLYNMQ 572

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BLAST of abc transporter vs. SwissProt
Match: gi|221222997|sp|P71082.2|YGAD_BACSU (RecName: Full=Putative multidrug export ATP-binding/permease protein YgaD)

HSP 1 Score: 308.531 bits (789), Expect = 2.227e-96
Identity = 182/583 (31.22%), Postives = 299/583 (51.29%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVV-------NQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQT 575
            M++ + Y++++ +     I+     +A  +L+   +D ++       ++ TS             I+A+    F I      +   Y   W   A  +  D+R   ++H+Q+ S+ F+    TG++++ + +DV Q + F+  G  ++    ++++ V ++   L   + L++    P+      YF  R   L  +  + +  +   L   I G+  I+SF  E  E  +  +++  + D   R    ++    V+        L      G+  +NG L VG     V    R+  P+  L  +     +++AS  R+   +D   ++ D+  A +A    G V F  V F+Y      I  D S++V  G T+ALVG +G GKSTL+ L+ RFY   +G + +DG DI D     LR  +G V Q+ FLF  +IR+NIA G P A+LE I  AA+ A A EFI   P+G  T VGERG+ LSGGQ+QR+++AR  LK+P +L+LDEATSA+D E+E  IQ ++ +LAK RT  ++AHRLST+ HA++IVV+ NG I+E G HD L+  +  Y   + +Q 
Sbjct:    8 MQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGGGTASDKTTSLFT----------IMAIMFALFLILRPPVEYYRQYFAQWT--ASKVLYDIRAKLFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTILIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLFTIQN 578

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BLAST of abc transporter vs. SwissProt
Match: gi|122064528|sp|Q2LVL0.1|MSBA_SYNAS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 301.597 bits (771), Expect = 1.666e-93
Identity = 171/517 (33.08%), Postives = 285/517 (55.13%), Query Frame = 0

Query:   60 LALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLW--PLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            + LA++  ++  G     YF  +L   + Q + AD+R   YE +Q+QS+ FF +  TG L++ + +DVN ++  +      L++   ++I +  V FY    +A++A    P+ I+    F ++   +    +  +G L++ LQ  I G   +++F  E  E +R  +E+        +++++++   P +      G       GG++ + G    G +    FLT  ++   P+  L    +  ++ +A  +R+  ++D   DI D   A      +  +    + F Y      + + ++ +  G  +A VG +G GK+TL+ L+ RFY   AG I +DG DI D+ L  LR  IG V+Q+  LF  ++R+NIAYG    S + I  AA+ A A +FI  LP+G  T +GE G  LSGG+RQR+++ARALLK+  +L+LDEATS++D E E  +Q +L RL KGRT ++IAHRLST+ +A+RIVV+  G+IVE+G H+TLLA +G Y+    +Q
Sbjct:   75 IPLAIILIYLVKGGC--SYFQAILMSFIGQRIVADLRNRLYEQIQKQSLSFFSKNPTGVLMSRITNDVNSIQGTVSDAVTSLMKDSFTLICLVFVIFYRDWQLAIIAMIVFPLTIYPIAKFGQKMRSVATRTQVTMGSLTTLLQETISGTRIVRAFCMEAHENQRFARENEKLMHLALKSVSINALSSPFMEFLGGIGIAAIIFYGGYQVIKGSSTPGTF--FSFLTALIMLYEPVKRLTNVNNTIQQGIAGAQRVFSIIDLVPDIVDRDEAVELPRISEKIEIRNISFAYDDTPV-LRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQILIDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGSQGCSEKEIIEAARAANAHDFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKLHQLQ 586

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BLAST of abc transporter vs. SwissProt
Match: gi|81827826|sp|Q6G868.1|Y1788_STAAS (RecName: Full=Putative multidrug export ATP-binding/permease protein SAS1788 >gi|81827988|sp|Q6GFJ1.1|Y1956_STAAR RecName: Full=Putative multidrug export ATP-binding/permease protein SAR1956 >gi|81832388|sp|Q7A0J1.1|Y1806_STAAW RecName: Full=Putative multidrug export ATP-binding/permease protein MW1806 >gi|81832479|sp|Q7A4T3.1|Y1683_STAAN RecName: Full=Putative multidrug export ATP-binding/permease protein SA1683 >gi|81855910|sp|Q99T13.1|Y1866_STAAM RecName: Full=Putative multidrug export ATP-binding/permease protein SAV1866 >gi|81859551|sp|Q5HEQ8.1|Y1924_STAAC RecName: Full=Putative multidrug export ATP-binding/permease protein SACOL1924 >gi|121957842|sp|Q2FFM9.1|Y1847_STAA3 RecName: Full=Putative multidrug export ATP-binding/permease protein SAUSA300_1847 >gi|121957846|sp|Q2G2M9.1|Y2003_STAA8 RecName: Full=Putative multidrug export ATP-binding/permease protein SAOUHSC_02003)

HSP 1 Score: 297.745 bits (761), Expect = 3.018e-92
Identity = 185/578 (32.01%), Postives = 292/578 (50.52%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILAL--AVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQT 575
            +++ + Y+ R+       II     +   +LI  AID V+N      A    E  H   +A+  A+  F I      F   YL  W   +  +  D+R   Y H+Q  S  F+     G +++ + +DV Q + F+  G  ++    +++I   ++ F+L   + L A    P  I   + F  R   L  +  + +  +   L   + GI+ +KSF  E  EA+   +++  +     +    ++     I      G +    +G +  ++G + VG     V   + L  PL  L  +     ++ AS  R+  L+D   DI++   A       G +    V F+Y    A I +D ++ +  G T+A VG +G GKSTLI L+ RFY   +G I +DG +I D     LR  IG V Q+  LF  ++++NI  G P A+ E +  AA+ A A +FI  LPQG  T VGERG+ LSGGQ+QRL++AR  L +P +L+LDEATSA+D E+E+ IQ +L  L+K RT +++AHRLST+ HA++IVV+ NG IVE G H  L+A +G Y   + +Q 
Sbjct:    6 LQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNH----ALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWT--SNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577

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BLAST of abc transporter vs. SwissProt
Match: gi|7388395|sp|Q9WYC4.1|Y288_THEMA (RecName: Full=Uncharacterized ABC transporter ATP-binding protein TM_0288)

HSP 1 Score: 297.745 bits (761), Expect = 4.597e-92
Identity = 182/577 (31.54%), Postives = 308/577 (53.38%), Query Frame = 0

Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAV-GAV--FFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            Y R +   +I+      ++ +  +    LIG  IDVV      FV    F+   + +L L      I+A  SL  +    +   L+QD+   +R   +E +QR  +GFF+    GD+++ + +DV+ +   L    N +IQ F  ++ + GAV   F ++ +++L+  S +P+ +        +    + + +  +G L+  ++ +I G+  IK FT E  E E+  + + +      +A   S    P++ M    GF      GG+  L   + VG     +  +++   PL  L+   ++ + A+AS  RI  +LD   + +D+  A    +  G + F  V F Y      ++D +  +  G  +ALVG TGSGK+T++ LL+RFY    G I +DG+DI  +  S LR +IG V Q+  LF  ++++N+ YG+P A+ E I  AA+   +  FI+ LP+G  T + + G  LS GQRQ LA+ RA L +P++L+LDEATS VD +TE +IQ ++ +L +G+T I+IAHRL+T+ +A+ I+V+ +G+IVE G HD L+  +G Y+  +  Q G
Sbjct:   31 YLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVV------FVPR-RFDLLPRYMLILGT----IYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVL---GNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEE-KDDPDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQYG 592

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BLAST of abc transporter vs. SwissProt
Match: gi|121957837|sp|Q2YU20.1|Y1799_STAAB (RecName: Full=Putative multidrug export ATP-binding/permease protein SAB1799c)

HSP 1 Score: 296.975 bits (759), Expect = 5.354e-92
Identity = 185/578 (32.01%), Postives = 292/578 (50.52%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILAL--AVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQT 575
            +++ + Y+ R+       II     +   +LI  AID V+N      A    E  H   +A+  A+  F I      F   YL  W   +  +  D+R   Y H+Q  S  F+     G +++ + +DV Q + F+  G  ++    +++I   ++ F+L   + L A    P  I   + F  R   L  +  + +  +   L   + GI+ +KSF  E  EA+   +++A +     +    ++     I      G +    +G +  ++G + VG     V   + L  PL  L  +     ++ AS  R+  L+D   DI++   A       G +    V F+Y    A I +D ++ +  G T+A VG +G GKSTLI L+ RFY   +G I +DG +I D     LR  IG V Q+  LF  ++++NI  G P A+ E +   A+ A A +FI  LPQG  T VGERG+ LSGGQ+QRL++AR  L +P +L+LDEATSA+D E+E+ IQ +L  L+K RT +++AHRLST+ HA++IVV+ NG IVE G H  L+A +G Y   + +Q 
Sbjct:    6 LQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNH----ALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWT--SNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNANFLTRALKHTRWNAYSFATINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIYHVNFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577

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BLAST of abc transporter vs. SwissProt
Match: gi|122064527|sp|Q2NUA5.1|MSBA_SODGM (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 295.434 bits (755), Expect = 2.122e-91
Identity = 191/533 (35.83%), Postives = 287/533 (53.85%), Query Frame = 0

Query:   51 GFETAHQQILA---LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKA-SLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            GF  A+  IL    L V+   +  G S F   Y V W  ++  +  +MR   + HM    + FF+++STG L++ +  D  Q+     G    +I+   S+I + A+ FY S  ++L+     PV+ +      +R   +   ++  +G +++  +  + G   +  F  + +E ER    S        + +A SS   P+I+   +A     FVL    F ++   L  G   V+      L+ PL SL      F+R MA+ + +  +LD   + +DEGT        G ++F  V F Y       + D S+ +P G T+ALVG +GSGKST+  LL RFY  Q G I LDG D+    L+ LR  +  VSQ   LF  +I +NIAY      S + I  AA+ A A +FIE++ QGL T +GE G+LLSGGQRQR+A+ARALL+D  +L+LDEATSA+D E+E AIQ++L  L K RT ++IAHRLST+  A+ I+VV  G+IVE+GNH+ L++ +G Y     +Q G
Sbjct:   55 GFGKANSNILVWMPLVVIGLMVLRGVSGFVSSYCVSW--VSGKVIMNMRRRLFNHMMDMPVSFFDQQSTGTLLSRITYDSEQVASSSSGALITVIREGASIIGLFAMMFYYSWQLSLILVVIAPVVSFAIRQVSKRFRQISKRMQNTMGQVTTSAEQMLKGHKEVLIFGGQKVENERFNSVSNRMRQQGMKMVAASSVSDPLIQF--IASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMETE-KDEGTV-EVERVKGDIAFDHVTFSYPGKETPSLHDISLSIPTGHTVALVGRSGSGKSTIANLLTRFYDIQQGQILLDGTDLRAYKLASLRNQVALVSQNVHLFNDTIANNIAYARKATYSRKQIENAARMAYAMDFIEKMDQGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQKALDALQKNRTSLVIAHRLSTIEKADEILVVVEGRIVERGNHEELMSRQGVYAQLHQLQFG 581

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BLAST of abc transporter vs. nr
Match: gi|1097669364|emb|SFU94903.1| (ATP-binding cassette, subfamily B [Halomonas korlensis])

HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0
Identity = 410/576 (71.18%), Postives = 470/576 (81.60%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            ++YARGYRRR+I ASA SIINKLFDIAPEILIG+AIDVVVNQ+TSFVA  GFE+A +QI+ L VLTFFIWAGES+F+Y + VLWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+I+WGAFYF R+A PLYADVRE+VG LSSRL NN+ GIATIKSFT+E  EAERLR+ S AY  ANRRAI +SSAFIPVIRMA+L+GFL TF +GG   L G+L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + + D G    A    G V FA+V FRY   G G+ D  + VP G TLALVGATGSGKSTLIKLLLRF+ AQ+G I++DG  I +L L+ LRGAIG VSQ+ +LFEG++RDNIAYG P AS E +  AAQ AEAW FI+ LP GL TAVGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL ++  GRTVIMIAHRLST+VHA+ I V+  G++VEQG H  LLA  G Y +QW VQTG
Sbjct:   22 LKYARGYRRRIIAASACSIINKLFDIAPEILIGVAIDVVVNQETSFVARLGFESAQEQIVMLGVLTFFIWAGESIFEYLFQVLWRNLAQRLQSDLRQDAYEHAQRLDMSFFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVVVTVLAVGAVFFVLSPLIALLAFTPIPLIVWGAFYFQRKAGPLYADVREKVGDLSSRLSNNLAGIATIKSFTAETREAERLREASEAYVTANRRAIRISSAFIPVIRMAILSGFLATFTVGGMMALRGDLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLATPVQVHDRGGRDLAETVRGEVEFAKVSFRYANSGEGVSDVQLLVPAGHTLALVGATGSGKSTLIKLLLRFHDAQSGDIRVDGQSIRELNLASLRGAIGLVSQDVYLFEGTVRDNIAYGRPDASEEDVIKAAQTAEAWSFIQALPDGLQTAVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLAKIGHGRTVIMIAHRLSTIVHADEIAVIHGGRVVEQGRHAELLAHDGRYAAQWRVQTG 597

[Close]

BLAST of abc transporter vs. nr
Match: gi|737587919|ref|WP_035558816.1| (ABC transporter ATP-binding protein [Halomonas sp. KO116] >gi|779737601|gb|AJY49795.1| Xenobiotic-transporting ATPase [Halomonas sp. KO116])

HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0
Identity = 408/578 (70.59%), Postives = 468/578 (80.97%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR++ A+A S+INKLFDIAPEILIG+AIDVVVNQ+ SFVAS GFET  QQI  LAVLTF IWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL+  I ++D+ T   A    G V+   V F Y   G G+E+  +  P G TLALVGATGSGKSTLIKLLLRFY  + G + +DG  I D+ ++ LR +IG VSQ+ +LFEGSIRDNIAYG P A   AI  AA+ AEAW F+E LPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+G+H +LLAA GHY +QW VQTG A
Sbjct:   15 LRYAKGYRRRIMAATACSVINKLFDIAPEILIGVAIDVVVNQEQSFVASLGFETPQQQITMLAVLTFVIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANSLIQVVVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEDREAERLRDASEAYVEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLEVPITVKDDSTTPLAQPVRGEVTIDNVSFHYATSGVGVENVHLHAPAGNTLALVGATGSGKSTLIKLLLRFYDPENGRVLIDGQPIIDVSMNSLRQSIGLVSQDVYLFEGSIRDNIAYGKPDADEAAIIDAAKTAEAWSFVETLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGQVAERGSHSSLLAANGHYAAQWRVQTGEA 592

[Close]

BLAST of abc transporter vs. nr
Match: gi|1227374834|ref|WP_094038290.1| (ABC transporter ATP-binding protein [Zobellella denitrificans] >gi|1226069161|gb|OXS16771.1| ABC transporter [Zobellella denitrificans])

HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0
Identity = 408/578 (70.59%), Postives = 470/578 (81.31%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYARGYR R++ A++ SI+NKLFDIAPEILIGIAIDVVVNQ+ SFVA  GF T  +QIL L VLTFFIWAGESLF+Y Y +LWRNLAQ LQ+D+R +AYEH+QR  MG+FE +S+G LV+++NDDVNQLERFLDGGAN LIQVFV+V+AVGAVF  LSP IALLAF+PIP+IIWGAFYF R+A P+YA+VRE+VG L+ RL NN+GGIATIKSFT+E  EAERLR  S AY +ANR+AI +SSAFIP+IRMA+L GFL TF+LGG KTL+G L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + ++D G    A    G V F  +GF Y +   G+ D  + VP GTTLALVGATGSGKSTL+KLLLRFY    G+I LDG  I  L +  LR +IG VSQE FLFEGSIRDNIAYG P+AS + +  AA+ AEAWEFIERLPQGL T VGERG+ LSGGQRQRL+LARALLKDP VL+LDEATSAVDNETEAAIQRSLR++A GRTVIMIAHRLST+VHA+ IVVV  G+I EQG H  LLA  G Y +QW VQTG A
Sbjct:   14 LRYARGYRGRIVAATSCSILNKLFDIAPEILIGIAIDVVVNQEQSFVARLGFVTPKEQILMLGVLTFFIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYEHVQRLDMGYFESKSSGQLVSIMNDDVNQLERFLDGGANSLIQVFVTVVAVGAVFMVLSPQIALLAFTPIPIIIWGAFYFQRKAGPVYAEVREKVGELAGRLSNNLGGIATIKSFTAEAREAERLRLSSEAYVEANRKAIRISSAFIPIIRMAILVGFLATFILGGLKTLDGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLTTPVRVQDGGEPL-AGPVKGEVRFEGLGFHYPSSRVGVNDIELTVPAGTTLALVGATGSGKSTLVKLLLRFYQPDRGAIYLDGQPIERLEMQALRRSIGLVSQEVFLFEGSIRDNIAYGRPEASEQEVIAAARVAEAWEFIERLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPVLILDEATSAVDNETEAAIQRSLRKIAHGRTVIMIAHRLSTIVHADNIVVVDQGRIAEQGRHAELLARDGLYAAQWRVQTGEA 590

[Close]

BLAST of abc transporter vs. nr
Match: gi|1367554635|gb|PSJ46525.1| (ABC transporter [Zobellella sp. 59N8])

HSP 1 Score: 818.92 bits (2114), Expect = 0.000e+0
Identity = 406/576 (70.49%), Postives = 467/576 (81.08%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            +RYARGYR R+I A+  SI+NKLFDIAPEILIGIAIDVVVNQ+ SFVA  GF  A +QIL L VLTF IWAGESLF+Y Y +LWRNLAQ LQ+D+R +AYEH+QR  MGFFE +S+G LV+++NDDVNQLERFLDGGAN LIQVFV+V+AVGAVF  LSP IALLAF+PIP+IIWGAFYF R+A P+YA+VRE+VG L+ RL NN+GGIATIKSFT+E  EAERLRQ S AY +ANR+AI +SSAFIP+IRMA+L GFL TF+LGG KTL+G L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + ++D G    A    G V F  + F Y + G G+ D  + V  G+TLALVGATGSGKSTL+KLLLRFY  + G I LDG  +  L + +LR  IG VSQ+ FLFEGSIRDNIAYG P+AS E +  AA+ AEAWEFIERLPQGL T VGERG+ LSGGQRQRL+LARALLKDP VL+LDEATSAVDNETEAAIQRSLR++A GRTVIMIAHRLST+VHA+ IVVV  G+I EQG H  LLA  G Y +QW VQTG
Sbjct:   14 LRYARGYRGRIIAATCCSILNKLFDIAPEILIGIAIDVVVNQEQSFVAKLGFVEAREQILVLGVLTFLIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYEHVQRLDMGFFESKSSGQLVSIMNDDVNQLERFLDGGANSLIQVFVTVVAVGAVFMVLSPQIALLAFTPIPIIIWGAFYFQRKAGPVYAEVREKVGELAGRLSNNLGGIATIKSFTAEAREAERLRQSSEAYVEANRKAIRISSAFIPIIRMAILVGFLATFILGGLKTLDGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLTTPVQVQDGGEGLTAP-VKGEVRFEGLSFHYPSSGVGVNDIELTVAAGSTLALVGATGSGKSTLVKLLLRFYQPEQGDIYLDGKSLARLDMQQLRQNIGLVSQDVFLFEGSIRDNIAYGRPEASEEEMVAAARVAEAWEFIERLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPVLILDEATSAVDNETEAAIQRSLRKIAHGRTVIMIAHRLSTIVHADSIVVVDQGRIAEQGRHAELLARNGLYAAQWRVQTG 588

[Close]

BLAST of abc transporter vs. nr
Match: gi|504059438|ref|WP_014293432.1| (ABC transporter ATP-binding protein [Oceanimonas sp. GK1] >gi|372986476|gb|AEY02726.1| ABC transporter transmembrane region [Oceanimonas sp. GK1])

HSP 1 Score: 818.15 bits (2112), Expect = 0.000e+0
Identity = 409/576 (71.01%), Postives = 467/576 (81.08%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            +RYA GYRRR++ A + SIINKLFDIAPEILIGIAIDVVVNQ+ SFVA  GF T  +QIL L  LTF IWAGESLF+Y Y +LWRNLAQ LQ+D+R +AY+H+QR  MGFFE +S+G LV++LNDDVNQLERFLDGGAN LIQVFV+V+AVGAVF  LSP IALLAF+PIP+IIWGAFYF R+A P+Y +VRERVG L+ RL NN+ GIATIKSFT+E  E+ERLR  S AY +ANRRAI +SSAFIPVIRMA+L GFL TF+LGG KTL+G L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL +L+  +  +D G A  A+   G + F  +GF Y AG AG++D S++VP GTTL LVGATGSGKSTLIKLLLRFY  Q G+I LD   I  L LS LRG IG VSQ+ +LFEGSIRDNIAYG P A    I  AA+QAEAWEFIERLPQGL T VGERG+ LSGGQRQRL+LARALLKDP VL+LDEATSAVDNETEAAIQRSLR +A+ RT+I+IAHRLSTVV A  IVV+  G+IVEQGNH  LLA  G Y +QW VQTG
Sbjct:   14 LRYAGGYRRRIVAAVSCSIINKLFDIAPEILIGIAIDVVVNQEQSFVARLGFVTPKEQILVLGALTFLIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYDHLQRLDMGFFERQSSGRLVSILNDDVNQLERFLDGGANSLIQVFVTVVAVGAVFMVLSPQIALLAFTPIPLIIWGAFYFQRKAGPVYTEVRERVGELAGRLSNNLNGIATIKSFTAEARESERLRAGSEAYVEANRRAIRISSAFIPVIRMAILVGFLATFILGGLKTLDGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDVLNEPVSGQDTGKAL-AAPVRGELRFENLGFHYGAGAAGVDDVSLQVPAGTTLGLVGATGSGKSTLIKLLLRFYQPQQGTIYLDETPIQQLALSSLRGNIGLVSQDVYLFEGSIRDNIAYGRPDACEADIVAAARQAEAWEFIERLPQGLDTQVGERGVRLSGGQRQRLSLARALLKDPPVLILDEATSAVDNETEAAIQRSLRHIARDRTLIVIAHRLSTVVQAHNIVVMERGRIVEQGNHAELLARNGQYAAQWRVQTG 588

[Close]

BLAST of abc transporter vs. nr
Match: gi|655259087|ref|WP_028669584.1| (ABC transporter ATP-binding protein [Saccharospirillum impatiens])

HSP 1 Score: 815.453 bits (2105), Expect = 0.000e+0
Identity = 409/576 (71.01%), Postives = 479/576 (83.16%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            ++YARGYRRR+I A+  S +NKLFDIAPEILIGIAIDVVVNQ+ SFVA  G ET   QI+ALAVLTF IWAGESLF+Y Y++LWRNLAQ LQAD+R +AYEH+Q+Q M FFE RS+G L+++LNDDVNQLERFLDGGAND+IQV V+V+AVGAVFF LSPLIA LAF+PIP+IIWGAFYF +RA PLYADVRERVG+L++RL NNIGG+ATIKSFT+E  EA ++R +S AYA+ANRRAIA+SSAFIPVIRMA+L GFL TFV+GGF+ LNG LGVGAYGVLVFLTQRLLWPLT LAQTIDLFERAMASTRRIL L+ T + + D+G    +    G V F QV F Y   GAG+ D S+EVP G TLALVGATGSGKSTL+KLLLRFY  Q G I+LDG+ I+ L L +LR  IG VSQ+ FLF+G+I +NIAY  P AS++ I  AA+ AEA EFI+RLP+G  T VGERG+ LSGGQRQRL+LARALLKDP VLVLDEATSAVDNETEAAIQRSL  +A+ RTVIMIAHRLST+VHA++IVV+ +G+IVEQG H +LL  +G Y SQW VQTG
Sbjct:   17 LKYARGYRRRIIAATVCSALNKLFDIAPEILIGIAIDVVVNQEASFVAQLGLETPQSQIIALAVLTFVIWAGESLFEYLYMILWRNLAQHLQADIRQDAYEHIQKQDMSFFESRSSGQLISILNDDVNQLERFLDGGANDIIQVLVTVVAVGAVFFVLSPLIAFLAFTPIPLIIWGAFYFQKRAMPLYADVRERVGVLATRLSNNIGGMATIKSFTAEEREARQIRADSDAYAEANRRAIAISSAFIPVIRMAILTGFLFTFVVGGFQVLNGVLGVGAYGVLVFLTQRLLWPLTELAQTIDLFERAMASTRRILVLIHTPVTVPDDGDQLFSGPVAGRVQFKQVSFEYGQSGAGVHDVSIEVPAGKTLALVGATGSGKSTLMKLLLRFYEPQQGQIELDGIAIDRLSLRDLRTHIGLVSQDVFLFDGTIAENIAYARPDASVDEIQAAARTAEALEFIDRLPEGFKTQVGERGVKLSGGQRQRLSLARALLKDPAVLVLDEATSAVDNETEAAIQRSLAHIAEDRTVIMIAHRLSTIVHADQIVVLEHGRIVEQGTHSSLLTGQGAYWSQWQVQTG 592

[Close]

BLAST of abc transporter vs. nr
Match: gi|1249867252|ref|WP_096779863.1| (ABC transporter ATP-binding protein [Zobellella denitrificans] >gi|1248764052|gb|ATG75066.1| ABC transporter [Zobellella denitrificans])

HSP 1 Score: 814.683 bits (2103), Expect = 0.000e+0
Identity = 406/578 (70.24%), Postives = 469/578 (81.14%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYARGYR R++ A++ SI+NKLFDIAPEILIGIAIDVVVNQ+ SFVA  GF T  +QIL L VLTFFIWAGESLF+Y Y +LWRNLAQ LQ+D+R +AYEH+QR  MG+FE +S+G LV+++NDDVNQLERFLDGGAN LIQVFV+V+AVGAVF  LSP IALLAF+PIP+IIWGAFYF R+A P+YA+VRE+VG L+ RL NN+GGIATIKSFT+E  EAERLR  S AY +ANR+AI +SSAFIP+IRMA+L GFL TF+LGG KTL+G L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + ++D G    A    G V F  +GF Y +   G+ D  + VP GTTLALVGATGSGKSTL+KLLLRFY    G+I LDG  I  L +  LR  IG VSQ+ FLFEGSIRDNIAYG P+AS + +  AA+ AEAWEFIE+LPQGL T VGERG+ LSGGQRQRL+LARALLKDP VL+LDEATSAVDNETEAAIQRSLR++A GRTVIMIAHRLST+VHA+ IVVV  G+I EQG H  LLA  G Y +QW VQTG A
Sbjct:   14 LRYARGYRGRIVAATSCSILNKLFDIAPEILIGIAIDVVVNQEQSFVARLGFVTPKEQILMLGVLTFFIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYEHVQRLDMGYFESKSSGQLVSIMNDDVNQLERFLDGGANSLIQVFVTVVAVGAVFMVLSPQIALLAFTPIPIIIWGAFYFQRKAGPVYAEVREKVGDLAGRLSNNLGGIATIKSFTAEAREAERLRLSSEAYVEANRKAIRISSAFIPIIRMAILVGFLATFILGGLKTLDGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLTTPVRVQDGGEPL-AGPVKGEVRFEGLGFHYPSSRVGVNDIELTVPAGTTLALVGATGSGKSTLVKLLLRFYQPDRGAIYLDGQPIERLEMQALRRNIGLVSQDVFLFEGSIRDNIAYGRPEASEQEVIAAARVAEAWEFIEQLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPVLILDEATSAVDNETEAAIQRSLRKIAHGRTVIMIAHRLSTIVHADNIVVVDQGRIAEQGRHAELLARDGLYAAQWRVQTGEA 590

[Close]

BLAST of abc transporter vs. nr
Match: gi|1223960108|ref|WP_091991408.1| (ABC transporter ATP-binding protein [Marinobacter gudaonensis] >gi|1097525348|emb|SFR55212.1| ATP-binding cassette, subfamily B [Marinobacter gudaonensis])

HSP 1 Score: 814.298 bits (2102), Expect = 0.000e+0
Identity = 403/576 (69.97%), Postives = 464/576 (80.56%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            +RYARGYRR++I A+  SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFETA +QI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAFYF R+A PLYADVRE+VG LSSRL NN+GGIATIKSFT+E  EA RL+Q S AY +ANR+AI +SSAFIPVIRMA+LAGFL TF +GG   L G L VGAYGVLVFLTQRLLWPLT LA+ IDLFERAMASTRRIL LL   + +RDEG     +   G V+F  V F Y A GAGI D S++VP G TLALVGATGSGKSTL+KLLLRFY    G I++DG  + +L L+ LRGAIG VSQ+ +LFEGSIR+N+AYG+ +A+   I  AA+ AEAW FIE LP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+   RTVIMIAHRLST+V A+ I V+  GK++E G H  LL   G Y  QW VQTG
Sbjct:   19 LRYARGYRRQIIAATTCSIINKLFDIAPEILIGVAIDVVVNQEESFVAGLGFETAQEQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQSDLRQDAYEHAQRLDMSFFEARSSGQLVATMNDDVNQLERFLDGGANAMIQVLVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFYFQRKAGPLYADVREKVGDLSSRLANNLGGIATIKSFTAEQREAARLKQSSEAYVEANRKAIRISSAFIPVIRMAILAGFLATFTVGGMMALEGSLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLAEPVHVRDEGGKPLQTPVKGDVTFDNVSFHYPASGAGIRDISLKVPAGNTLALVGATGSGKSTLVKLLLRFYDPSNGEIRIDGQPVRELSLNSLRGAIGLVSQDVYLFEGSIRENLAYGNHQATEAEIIEAARTAEAWSFIESLPEGLDTPVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIGHNRTVIMIAHRLSTIVEADAIAVIEGGKVLELGTHRELLEKDGAYARQWQVQTG 594

[Close]

BLAST of abc transporter vs. nr
Match: gi|764484239|ref|WP_044386930.1| (ABC transporter ATP-binding protein [Marinobacter excellens] >gi|938293883|gb|KPQ27855.1| ATP-binding cassette, subfamily B, bacterial [Marinobacter excellens HL-55])

HSP 1 Score: 814.298 bits (2102), Expect = 0.000e+0
Identity = 416/578 (71.97%), Postives = 471/578 (81.49%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            MRYARGYRRR++ A+  S+INKLFDIAPEILIG+AIDVVVN++ SFVA  GFETA QQI  LAVLTFFIWAGESLF+Y Y +LWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+IIWGAFYF R+A PLYADVRE+VG LSSRL NN+GGIATIKSFT+E  EA RL+Q S AY DANRRAI +SSAFIPVIRMA+LAGFL TF +GG   LNG+L VGAYGVLVFLTQRLLWPLT LA+ IDLFERAMASTRRIL LL   +++RD+     A    G V F QVGF Y + GAG+   S+EVP G TLALVGATGSGKSTLIKLLLRFY    G I+LDG  I D+ L  LR AIG VSQ+ +LFEGSIRDN+AYG P A+ E IT AA+ AEAW FI +LPQGL T VGERG+ LSGGQRQRL+LARALLKDP VLVLDEATSAVDNETEAAIQRSLRR+   RTVIMIAHRLST+V A+ I V+ NG+++EQG+H TLL   G Y +QW VQTG A
Sbjct:   18 MRYARGYRRRIVAATTCSVINKLFDIAPEILIGVAIDVVVNKEESFVAGLGFETAQQQITILAVLTFFIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYEHAQRLDMSFFEARSSGQLVATMNDDVNQLERFLDGGANAMIQVAVTVVAVGAVFFVLSPLIALLAFTPIPLIIWGAFYFQRKAGPLYADVREKVGDLSSRLANNLGGIATIKSFTAELREARRLKQASEAYVDANRRAIRISSAFIPVIRMAILAGFLATFTVGGMMALNGDLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLAEPVNVRDQAGQNLAQPVQGKVVFDQVGFHYASSGAGVNGISLEVPAGNTLALVGATGSGKSTLIKLLLRFYDPTHGEIRLDGQPIRDVSLKSLRDAIGLVSQDVYLFEGSIRDNLAYGKPDATDEEITEAARTAEAWSFISQLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPVLVLDEATSAVDNETEAAIQRSLRRIGHNRTVIMIAHRLSTIVDADTIAVIDNGQVIEQGDHQTLLELNGAYAAQWRVQTGQA 595

[Close]

BLAST of abc transporter vs. nr
Match: gi|1362736235|gb|PSF07489.1| (ABC transporter [Marinobacter halophilus])

HSP 1 Score: 813.913 bits (2101), Expect = 0.000e+0
Identity = 415/576 (72.05%), Postives = 472/576 (81.94%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            MRYARGYRRR+I A++ S+INKLFDIAPEILIG+AIDVVVN++ SFVA  GFETA QQI  LAVLTFFIWAGESLF+Y Y +LWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+IIWGAFYF R+A PLYADVRE+VG LSSRL NN+GGIATIKSFT+E  EA RL Q S AY DANRRAI +SSAFIPVIRMA+LAGFL TF +GG   L+G+L VGAYGVLVFLTQRLLWPLT LA+ IDLFERAMASTRRIL LL   +++RD+     A    G V+F QVGF Y + GAG+   S+EVP G TLALVGATGSGKSTLIKLLLRFY    G I+LDG  I D+ L  LR AIG VSQ+ +LFEGSIRDN+AYG P A+ E IT AA+ AEAW FI +LP+GL TAVGERG+ LSGGQRQRL+LARALLKDP VLVLDEATSAVDNETEAAIQRSLRR+   RTVIMIAHRLST+V A+ I V+ NG+++EQG+H TLL   G Y +QW VQTG
Sbjct:   18 MRYARGYRRRIIAAASCSVINKLFDIAPEILIGVAIDVVVNKEESFVAGLGFETAQQQITILAVLTFFIWAGESLFEYLYQILWRNLAQRLQSDLRQDAYEHAQRLDMSFFEARSSGQLVATMNDDVNQLERFLDGGANAMIQVAVTVVAVGAVFFVLSPLIALLAFTPIPLIIWGAFYFQRKAGPLYADVREKVGDLSSRLANNLGGIATIKSFTAELREARRLEQASEAYVDANRRAIRISSAFIPVIRMAILAGFLATFTVGGMMALSGDLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLAEPVNVRDQAGQNLAQPVQGKVAFDQVGFHYASSGAGVNGISLEVPAGNTLALVGATGSGKSTLIKLLLRFYDPTQGEIRLDGQPIRDVSLKSLRDAIGLVSQDVYLFEGSIRDNLAYGKPDATDEEITEAARTAEAWSFISQLPEGLDTAVGERGVRLSGGQRQRLSLARALLKDPPVLVLDEATSAVDNETEAAIQRSLRRIGHNRTVIMIAHRLSTIVDADTIAVIDNGQVIEQGDHQTLLELNGAYAAQWRVQTG 593

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 22


Match Name	E-value	Identity	Description
EMLSAG00000007660	1.682e-74	31.18	supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g...	[more]
EMLSAG00000003104	4.945e-62	37.36	supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-...	[more]
EMLSAG00000010048	2.539e-56	45.15	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]
EMLSAG00000002221	1.288e-46	29.14	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000004490	5.368e-46	29.03	supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1...	[more]
EMLSAG00000003611	2.919e-43	30.30	supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ...	[more]
EMLSAG00000002016	2.778e-40	36.19	supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1...	[more]
EMLSAG00000011700	7.454e-39	25.34	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000008248	2.008e-38	28.69	supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1...	[more]
EMLSAG00000001655	2.348e-37	27.50	supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487...	[more]

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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1176951\|sp\|P45861.1\|YWJA_BACSU	3.364e-116	35.52	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|226693608\|sp\|O31707.3\|YKNU_BACSU	6.213e-101	36.17	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|81815540\|sp\|O31708.1\|YKNV_BACSU	8.277e-101	34.08	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|67468754\|sp\|Q6AJW3.1\|MSBA_DESPS	2.702e-97	35.82	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|221222997\|sp\|P71082.2\|YGAD_BACSU	2.227e-96	31.22	RecName: Full=Putative multidrug export ATP-bindin...	[more]
gi\|122064528\|sp\|Q2LVL0.1\|MSBA_SYNAS	1.666e-93	33.08	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|81827826\|sp\|Q6G868.1\|Y1788_STAAS	3.018e-92	32.01	RecName: Full=Putative multidrug export ATP-bindin...	[more]
gi\|7388395\|sp\|Q9WYC4.1\|Y288_THEMA	4.597e-92	31.54	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|121957837\|sp\|Q2YU20.1\|Y1799_STAAB	5.354e-92	32.01	RecName: Full=Putative multidrug export ATP-bindin...	[more]
gi\|122064527\|sp\|Q2NUA5.1\|MSBA_SODGM	2.122e-91	35.83	RecName: Full=Lipid A export ATP-binding/permease ...	[more]

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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1097669364\|emb\|SFU94903.1\|	0.000e+0	71.18	ATP-binding cassette, subfamily B [Halomonas korle...	[more]
gi\|737587919\|ref\|WP_035558816.1\|	0.000e+0	70.59	ABC transporter ATP-binding protein [Halomonas sp....	[more]
gi\|1227374834\|ref\|WP_094038290.1\|	0.000e+0	70.59	ABC transporter ATP-binding protein [Zobellella de...	[more]
gi\|1367554635\|gb\|PSJ46525.1\|	0.000e+0	70.49	ABC transporter [Zobellella sp. 59N8]	[more]
gi\|504059438\|ref\|WP_014293432.1\|	0.000e+0	71.01	ABC transporter ATP-binding protein [Oceanimonas s...	[more]
gi\|655259087\|ref\|WP_028669584.1\|	0.000e+0	71.01	ABC transporter ATP-binding protein [Saccharospiri...	[more]
gi\|1249867252\|ref\|WP_096779863.1\|	0.000e+0	70.24	ABC transporter ATP-binding protein [Zobellella de...	[more]
gi\|1223960108\|ref\|WP_091991408.1\|	0.000e+0	69.97	ABC transporter ATP-binding protein [Marinobacter ...	[more]
gi\|764484239\|ref\|WP_044386930.1\|	0.000e+0	71.97	ABC transporter ATP-binding protein [Marinobacter ...	[more]
gi\|1362736235\|gb\|PSF07489.1\|	0.000e+0	72.05	ABC transporter [Marinobacter halophilus]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2803_size12270	supercontig	scaffold2803_size12270:6100..7836 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:transmembrane transport

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1	snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2803_size12270:6100..7836-

gene from alignment at scaffold2803_size12270:6100..7836-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold2803_size12270-processed-gene-0.3 ID=snap_masked-scaffold2803_size12270-processed-gene-0.3|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2803_size12270:6100..7836- (Tigriopus kingsejongensis)
ATGCGCTATGCGCGTGGTTATCGGCGGCGCGTGATATTGGCGTCAGCCTC
TTCCATTATCAACAAGCTGTTTGATATTGCGCCAGAAATCTTGATCGGTA
TCGCCATTGATGTGGTGGTCAATCAGGACACCAGCTTTGTCGCAAGCTTT
GGTTTTGAAACCGCACATCAGCAAATCCTGGCGCTGGCGGTTTTGACTTT
TTTTATCTGGGCCGGTGAGTCCTTGTTTCAGTACTTTTATTTGGTGCTGT
GGCGCAACTTGGCGCAAGACTTACAGGCGGATATGCGGCTCAACGCCTAC
GAGCACATGCAGCGCCAATCGATGGGCTTCTTTGAAGAGCGCAGCACGGG
TGATTTAGTTGCGGTGCTAAATGACGACGTCAATCAGCTCGAGCGTTTCC
TCGACGGTGGCGCCAACGATTTAATCCAAGTTTTTGTCTCGGTGATCGCC
GTCGGCGCGGTGTTCTTTTATCTCTCGCCGCTAATTGCGCTGCTGGCTTT
TAGTCCGATACCGGTGATTATCTGGGGTGCGTTTTACTTTTTGCGTCGTG
CCAGTCCGCTGTATGCCGATGTGCGCGAGCGTGTGGGTTTGCTCAGTAGT
CGTCTGCAAAACAACATCGGTGGCATTGCGACTATTAAAAGCTTTACCTC
CGAAGGTATCGAGGCTGAACGCCTGCGCCAAGAAAGTGCCGCTTATGCGG
ACGCCAATCGCCGCGCTATCGCGGTCAGCTCGGCTTTTATTCCGGTGATT
CGCATGGCGGTGTTGGCGGGCTTTTTGTGCACCTTTGTGCTCGGTGGCTT
CAAGACACTAAACGGCGAGCTAGGTGTCGGTGCCTACGGTGTGTTGGTGT
TTTTGACTCAGCGCTTGCTCTGGCCGCTGACAAGCTTGGCGCAGACCATT
GATTTGTTTGAACGAGCAATGGCCAGTACGCGGCGAATATTGGGATTGCT
CGATACAACGATAGATATCCGCGACGAAGGTACGGCCACGCGTGCCAGCG
ATGCCAATGGCACCGTGAGCTTTGCGCAAGTTGGCTTTCGCTACAGAGCG
GGCGGGGCCGGCATTGAGGATTTCAGTGTTGAAGTGCCGGGCGGTACAAC
CTTGGCACTGGTCGGTGCCACCGGCTCTGGTAAATCCACCTTGATCAAGC
TGCTGCTGCGTTTTTACTCGGCGCAGGCGGGCAGTATTAAACTCGATGGG
GTTGATATCAATGATTTGCCCCTGAGCGAGCTGCGCGGTGCGATAGGTTT
TGTCAGCCAAGAGCCCTTTTTATTCGAAGGCAGTATTCGCGACAATATCG
CCTACGGTGACCCCAAGGCTAGTCTTGAGGCCATCACCTTGGCTGCGCAA
CAGGCAGAAGCTTGGGAGTTTATTGAGCGTTTGCCGCAGGGCTTGCATAC
GGCTGTCGGGGAGCGGGGCATATTGCTCTCAGGCGGGCAGCGACAACGCC
TTGCGCTAGCGCGCGCCCTGCTTAAAGATCCACAAGTGCTGGTATTGGAC
GAGGCCACCAGCGCAGTCGACAACGAAACCGAAGCCGCAATTCAGCGCTC
CTTGCGCAGGCTTGCCAAAGGCCGCACCGTCATTATGATCGCGCATCGGC
TATCAACGGTTGTACACGCGGAGCGCATTGTCGTGGTCGCCAACGGGAAA
ATAGTCGAACAAGGCAACCATGACACTTTGCTAGCGGCCAAGGGTCATTA
CCATTCCCAGTGGATGGTGCAAACCGGCGGCGCTTAG

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk03486

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