abc transporter, snap_masked-scaffold2803_size12270-processed-gene-0.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 249.595 bits (636), Expect = 1.682e-74 Identity = 183/587 (31.18%), Postives = 294/587 (50.09%), Query Frame = 0 Query: 3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQIL------ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDAN-GTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAG-SIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574 Y + +I A S+I F+I +L+G ++VV + + V S E H L L+++ F +A +S+ Y+ L + + A +R + + + Q + FF+E TG++V+ L+ DV + + + G Q ++++ + +SP + +P +I G Y L + +V ++ + I I T++ F E E E +E D N F + + L T GG+ + L G + Q + +T ++ + MAS RI ++ I G + G V F + F Y R A ++DFS+ +P T+ALVG +G GK+T+ LL RFY G S+++DG++I DL S LRG AIG+++QEP LF S+ +NI YG P A+ + AA+ A +F+ P G T +GERG+ +SGGQ+QR+A+ARALLK+P +L+LDEATSA+D E+E +Q +L +L+KGRT ++IAHRLST+ +A+ I V+ G + E G H L KG +S+ + Q Sbjct: 95 YITPHFHYLICAVCSAIAVAYFNIKIPLLLGDIVNVVSSYISETVLS---EMRHDNFLREMKEPTLSMIKF--YAAQSICTIAYIYSLACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSM----YMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTH-AALKRKGGIYSRLIEQ 671
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 219.935 bits (559), Expect = 4.945e-62 Identity = 133/356 (37.36%), Postives = 199/356 (55.90%), Query Frame = 0 Query: 211 TIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTL-NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANG----TVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561 T+K F +E E ++ + Y A+ + S + + + A+ + L ++ K + NG L VG ++ L +L PL L +++ + + L+ T I AT + N +++F V F Y S V G T+A+VG +GSGKSTL++LL RFY Q GSIK+ +IN++ L LR I V Q+ LF +I NI YG+ S E + A+ AE I PQG T VGERG+ LSGG++QR+A+ARA LKD +++ DEATS++D+ TE I ++L+R+ G+T I+IAHRLSTVVHA+ I V++NGK++E+G H+ LL Sbjct: 232 TVKYFNNEAYECQQYDKSLLKYETASLKTTE-SLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 201.83 bits (512), Expect = 2.539e-56 Identity = 107/237 (45.15%), Postives = 154/237 (64.98%), Query Frame = 0 Query: 331 RASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564 +A G ++F V F Y R + S E G TLALVG +G GKST+I+L+ RFY G + +DG DI L LR IG V QEP LFE SI++NI G + S + I + A A++FI+RLP+ T VGE+G LLSGGQ+QR+A+ARAL+++P +L+LDEA+SA+D+++E +Q +L + KGRT I++AHRLST+ A+ I+V+ +G V+ G H++L + K Sbjct: 237 KAPPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNK 473
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 175.252 bits (443), Expect = 1.288e-46 Identity = 176/604 (29.14%), Postives = 280/604 (46.36%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASS-IINKLFDIAPEILIGIAIDVVVNQD--TSFVASFGFETAHQQILALAVLTFFIWAGESL---------FQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVI----IWGAFYFLRRASPLYADVRERVGLLSSR--------LQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTF------VLGGFKTLNGELGVG-AYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTID---IRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP--KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564 M Y + +++A +S +I + + +L+ D V+ + T + + +Q I+ V I+ G L F + YL AQ L M E + + M FF+ G ++ L D++ L+ + I F+ V LS LI ++ +P+ +I I ++F++R +Y ++ L S + G ATI+++ ++ ES + D N++A VS+ ++ V R+ V+ G L F VLG G +G+ +Y + V T L W L +A + E + + RI + I ++ G +SF RYR G +++ S+++ GG + +VG TG+GKS+ + R G+I +DGVDI L L +LR I + Q+P LF GS+R N+ DP + + I A + FI+ L GL V E G LS GQRQ + LARALL+ +VL+LDEAT+AVD ET+ IQ+++R K TVI IAHRL+T++ +I+V+ NG+ VE G LLA K Sbjct: 974 MHYVKNMSIILVVACSSCFVIYQALNTLSNVLLAWWSDAVMKIEVRTGLNDNRTLDEINQDIMDXQVYYLSIYGGYCLGQGIVVVMGFVFMYLAC-MEAAQRLHNQM----LESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGV---------LSSLIVVMVTTPVFIIPASLIIICYFFIQR---IYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYG----QSSTFISESESKVDDNQKANFPATVSNRWLAV-RLEVV-GNLIVFTAALLAVLGRDSLSPGLVGLSVSYALAV--TASLNW-LVRMASEV---ETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADK 1545 HSP 2 Score: 105.531 bits (262), Expect = 9.173e-24 Identity = 83/308 (26.95%), Postives = 156/308 (50.65%), Query Frame = 0 Query: 281 VLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRAS--DANGTVSFAQVGFRYRAGGAG--IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY-----GDPKASL-EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQ----RSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574 V + L L +PL+ L I A S +RI +++ +I +E + + D ++ + ++ + + D S+++ G+ +A+VG GSGKS+L+ +L +G I + RG+I + +Q+ ++ S+++NI + GD + EA L + ++ LP G T +GE+GI LSGGQ+QR++LARA+ + +LD+ SAVD+ I S + K +T +M+ H ++ + ++I+V+ +G++ E G + LL KG + ++++VQ Sbjct: 577 VCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSE-EIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITV-------------RGSIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSD-------LDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAF-AEFIVQ 862
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 167.548 bits (423), Expect = 5.368e-46 Identity = 126/434 (29.03%), Postives = 213/434 (49.08%), Query Frame = 0 Query: 88 AQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAF---------IPVIRMAVLAGFLCT---FVLGGFKTL---NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEAT 503 Q + A +R + + +Q FF+ TG+LV L+ D + + L + ++ + +A G + ++SP +AL+ S +P + A + ++ + + + + + Q I I T+++F E E+ ++ + D + + + F + ++ + GFL T +G + +G +G+G GV F + + +A+ + RI ++D T + + NG ++F +VGF Y R + + ++ + LA+VG+ KSTL LLLR Y G + +DG DI +L + LR IG V QEP LF G+I++NI YG + K E I AA+++ A +FI P T VGERG+LLSGGQ+QR+A+A A+LK+PQ L+LDEAT Sbjct: 62 GQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIM---------------KALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 165.236 bits (417), Expect = 2.919e-43 Identity = 123/406 (30.30%), Postives = 203/406 (50.00%), Query Frame = 0 Query: 185 SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA--IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGEL-GVGAYGVLV----FLTQRLLWPLTSLAQTIDLFERAMASTRRILGL--LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTL-LAAKGHYHSQWMVQTGG 577 SP+Y+ E ++ G+++I+++ ++ + ES D N+R ++ + +R+ + G LC F N EL G G G+++ LTQ L W L + E + + R+ LD + R + + G V F RY+A + + + + GG + +VG TG+GKS+L L R A G I +DG DI+ L L +LR ++ + QEP LF G++R N+ DP+ + I E+I L GL+ ++ E G+ LS GQRQ + LARALL+ ++L+LDEAT+AVD ET+ IQ ++R T++ IAHRL T++ ++I+V+ G ++E G+ + L + + +HS M+ G Sbjct: 1016 SPIYSHFSE-----------SLNGLSSIRAYGAQS----KFILESINKIDTNQRCNYPSIIANRWLAMRLETI-GNLCIFGXAILTMTNPELVGPGKVGLVISYALILTQNLNW----LXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHS--MINAAG 1396 HSP 2 Score: 110.923 bits (276), Expect = 1.437e-25 Identity = 72/252 (28.57%), Postives = 123/252 (48.81%), Query Frame = 0 Query: 325 DEGTATRASDANGTVSFAQVGFRYRAGGA--GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRR----LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564 D+G A D N F++ + + + ++ + G+ A+VG GSGKS+LI +L ++G +++ +G I +V QE ++ S+++NI +G P LE L + LP G T +GERGI LSGGQRQR++LARA+ D V + D SA+D++ ++ ++ + K +T +++ H +S + H I V+ G+I+ +G + LL K Sbjct: 548 DQGDAIVIRDGN---------FKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRI-------------KGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYD-------LSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEKK 770
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 156.377 bits (394), Expect = 2.778e-40 Identity = 93/257 (36.19%), Postives = 141/257 (54.86%), Query Frame = 0 Query: 322 DIRDEGTATRASDANGTVSFAQV----GFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKA--SLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK-GHYHSQW 571 D+R G + + F V F YR + FS+E+P + + G +GSGKSTL+ ++R GSI ++G++IN +PLS LR + + Q+ LF G+IR N+ DP+ S E I +A+ + + P GL T V E G S GQRQ L + +ALL+ P+V++LDE+TSA+D E A+ +L + T+I +AHRLS +V ER++V+ G+I+E GN LL G + + W Sbjct: 1630 DVRVSGDFLQNDSEGLIIRFNSVCLAPSFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNL---DPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALW 1883 HSP 2 Score: 100.138 bits (248), Expect = 4.734e-22 Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 0 Query: 355 IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP---KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNE-TEAAIQRSLRR--LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQG 555 ++ ++E+ G+ ++G +GSGK+ LI L+ GS+K + D + + Q P+L +I+DNI G P K + I Q + I+ LP G T +GERG+LLSGGQRQRLA+AR L +D S++D++ T + + + L + RTV + RL + A+ IV + +G I QG Sbjct: 745 LQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPD-----------TVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTD----IDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQG 936
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 152.14 bits (383), Expect = 7.454e-39 Identity = 148/584 (25.34%), Postives = 255/584 (43.66%), Query Frame = 0 Query: 12 ILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILA-LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLD-------GGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRR-----ASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVI--------RMAVLAGFLCTFVLGGFKTLN------GELGVGAYGVLVFLTQRLLWPL---TSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAW--EFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562 ILA + II+++ + + + D N D + H I A L V FI +L L+ D + ++ + + M FF+ G ++ D+ L+ + G I V++I++ F + L + + I ++ + L+R SP+Y S + GI T+++++ E A Y++ RR PVI R+ ++ F+ F F L+ G+LG+ L +T L W + + L I ER + + + ++ ++ + G ++ + +YR + D +V + G + +VG TGSGKSTL L R +G I +DGVDI + L LR + + Q+P LF G++R N+ DP + + L A+ +F++ GL + E G +S GQRQ + LARALL+ +VL++DEAT+AVD+ET+ IQ++++ + TV+ IAHRL TV+ +I+V+ +G I+E + LL+ Sbjct: 1437 ILAFSFFIISQILATGSSVWLSVWSDAKNNTDIYY---------HLGIYAGLGVSNIFISTAGTLILSLSLL-------DASRILHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIAT-VTIISINVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIY-----------SHFGETLSGINTVRAYS----------LEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFI-IFASALFSVLSRDTITPGQLGLNVSSSLA-ITSILSWVIRMYSDLENNIVAVERIKEYSNK---ESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972 HSP 2 Score: 98.5969 bits (244), Expect = 1.644e-21 Identity = 64/215 (29.77%), Postives = 110/215 (51.16%), Query Frame = 0 Query: 356 EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSL---RRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561 +D S++V G +A++G GSGKS+LI LL G + N + E+ G++ + Q ++ S++DNI +G L+A +L + +E P G T +GE+GI LSGGQ+QR++LARA+ + LD+ + VD+ + + L +G+T I++ H LS + + I + +G+I E+G + L+ Sbjct: 1165 KDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESD-------MEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELM 1362
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 150.599 bits (379), Expect = 2.008e-38 Identity = 142/495 (28.69%), Postives = 228/495 (46.06%), Query Frame = 0 Query: 91 LQADMRLNA--YEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLI-QVF-----VSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRA-----SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGL----LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562 L A M+++ E++ R + FF+ G ++ + D++ L +I Q F + +I + +F++ L A++ ++ I ++R SP+Y+ E + GI TI++F G+ E+ D N + +SS ++ V R+ L L FV T G G G+ + + L L E M S RI + D+ + + +G + F RYR G ++ + + G + +VG TG+GKS+L L R GSI +DG +I L L +LR I + Q+P LF GS+R N+ DP + I +A + + F+ L GL+ +V E G LS GQRQ + LARA+L+ Q+LVLDEAT+A+D ET+ IQ ++R K TV+ IAHR++T++ + RI+V+ G I E + LLA Sbjct: 1029 LNASMKIHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPIYSHFAE-----------TLTGIPTIRAF---GM-VHHFIDENVNKIDFNAKCYFPTVISSRWLAV-RLETLGNILVIFVALFSITSRGTTDPGMVGLSLSYALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPE-HGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL---DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLA 1503 HSP 2 Score: 100.523 bits (249), Expect = 2.974e-22 Identity = 74/255 (29.02%), Postives = 121/255 (47.45%), Query Frame = 0 Query: 330 TRASDANGTVSFAQVGFRYRA--GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG---DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-----EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574 + S + V V + G +ED +++ G+ +A+VG GSGKS+L+ +L GSI +DG I + Q+P+L ++R+NI +G + K I A + ++ LP G T +GERGI LSGGQ+ R++LAR + + +LD+ SAVD E I S L K +T I + H + ++I+V+ NG I E G + L+ + +Q+++ Sbjct: 608 SHESQGSHAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPD----LDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVIS-SQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLIN 844
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 147.517 bits (371), Expect = 2.348e-37 Identity = 132/480 (27.50%), Postives = 220/480 (45.83%), Query Frame = 0 Query: 105 RQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRAS--PLYADVRERVGLLS-----SRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGE-LGVGAYGVLVF----LTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD--ANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKAS------LEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAA 563 R + FF+ G ++ + D ++ L N + V V Y P I L+ P+ G FY+ + P D++ R+ +S + G+ I++ S+ + L E + R A S++ IR+ L G + F + +N E + G G+ V +T RL + S +T E+ + + R +D + G + G V F + RY+ + + + + +VG TG+GKS+LI L R S G I +DG+ I LPL + R + Q+PF+F G+IR N+ DP A ++I L+ + F GL T +G+ G LS GQ+Q L LARA++ +V+ +DEAT++VD ET+ I+ L+ +TVI IAHR+ TV++++RI V++NG+I+E+G + L+ + Sbjct: 984 RAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPWI-LIVLLPL-----GLFYYEIQCKYRPGSRDLK-RISSVSLSPIYEHFNETVHGLKIIRA--SKASQRFLLENEELVECNQKARYAAFSASLWLEIRLQ-LIGSIVVFSIALISVINFESVDAGLVGLAVSYALGMTXRLAEVVVSFTET----EKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELWDSIKLSYLYNIIYSFGS---SGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKS 1443 HSP 2 Score: 87.0409 bits (214), Expect = 5.410e-18 Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 322 DIRDEGTATRASDANGT----VSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVD-NETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKI--VEQGNH 557 + +DE T +AS T + + F + + + V + + ++G GSGK+T + +L Q+G I + PLS I +V Q P++ SIRDNI +G+ + + +F + L +G HT GE+G LSGGQ+ R+ALARA+ +D + ++D+ S++D N + L K +T I+ H + A ++ + +G+ V+Q H Sbjct: 615 EYKDENT--KASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISVRD------PLS----GIAYVQQVPWIQNKSIRDNILFGEMYIHGKYTKVIKACCLDHDF-KHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844
BLAST of abc transporter vs. SwissProt
Match: gi|46396526|sp|Q9KQW9.1|MSBA_VIBCH (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 290.426 bits (742), Expect = 1.922e-89 Identity = 191/577 (33.10%), Postives = 300/577 (51.99%), Query Frame = 0 Query: 3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVV-NQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 Y R Y+ +++++ + +IN D L+ +D N +++F+ +IL +L G S F Y + W ++ ++ MR + H + FF++ STG L++ + D Q+ +++ S+I + + F+ S ++L+ PV+ + + +R + +++ +G ++S + + G + S+ + +E +R + S + + ++ S PVI+M L ++ EL G + V+ L+ PL +L F+R MA+ + + GL+D + RD G A NG V V F Y+ + S +P G T+ALVG +GSGKST+ L RFY +GSI LDG D+ D L+ LR VSQ LF +I +NIAY + + + E I AA+QA A EFIE +PQGL T +GE G LSGGQRQR+A+ARALL+D VL+LDEATSA+D E+E AIQ +L L K +TV++IAHRLST+ A+ I+VV G+I+E+G H LLA G Y +Q G Sbjct: 19 YIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFL----------RILPFMILGLMFVRGLSGFASSYCLSW--VSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE-RDNGK-YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFG 581
BLAST of abc transporter vs. SwissProt
Match: gi|122064507|sp|Q3J7R8.1|MSBA_NITOC (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 288.5 bits (737), Expect = 1.528e-88 Identity = 201/579 (34.72%), Postives = 310/579 (53.54%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVI---IWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYR-AGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGD-PKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574 + Y R YR A+SII A E G+A + D SF+ + A QI+ L ++ F+ G + F Y + W +A+ + D+R + H+ +++++++G L+A L DV Q+ +I+ ++++ + A YL+ L+ L+ P+I IW + RR S ++ +G +S Q I G +K F + EAER Q + + A + PV+++ + G L +++ ++ VG + + LL P+ L + +R +A+ + I GLL T + D G + A G + F + F Y A G +E+ +E+ T+ALVG +GSGKSTL+ LL RFY +G I +D +DI L L+ELR I VSQ+ LF +I NIAYG + S + I AA+ A A EFI RLP GL T +GE+G+LLSGGQRQRLA+ARALLKD +L+LDEAT+++D E E IQ +L L + RT ++IAHRLSTV +A++I+V+ G+I+E+G H LLA + HY + +Q Sbjct: 18 LSYTRPYR----WIFAASIITMAIYAATET--GLAALMKPLMDGSFIER---DPATIQIIPLLLIGLFVIRGGANFITQYGLKW--VARRVVRDLREQMFCHLLALPARYYDQKASGQLLAKLIYDVEQVSNAATDAILTIIRDSLTILGLLAWMAYLNGLLTLIILVTAPLIALIIWWVSHRFRRIS---RKIQNSMGDVSQVAQETIEGHREVKIFGGQTYEAERFDQVNEQNRRQTMKMAATDAISQPVVQLIAVLGLAGVIHLATRESMLAQISVGTFISFITAMMLLLGPVKRLTKINGTLQRGIAAAQSIFGLLAETPEA-DRGQQS-LRRARGAIRFEHLSFCYEPAKGPVLENIDLEIKPYQTIALVGHSGSGKSTLVSLLARFYETTSGRILIDEMDIQTLRLTELRRQIALVSQQIILFNDTIAHNIAYGSYQQTSKQDIIRAAEAAHAMEFINRLPDGLDTVIGEKGVLLSGGQRQRLAIARALLKDAPILILDEATASLDTEAERHIQAALETLMRQRTTLVIAHRLSTVENADQIIVLHQGQIIERGTHSQLLARESHYAGLYRLQ 580
BLAST of abc transporter vs. SwissProt
Match: gi|67468755|sp|Q6D437.2|MSBA_PECAS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 286.574 bits (732), Expect = 5.401e-88 Identity = 183/533 (34.33%), Postives = 289/533 (54.22%), Query Frame = 0 Query: 51 GFETAHQQIL---ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRA-GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 GF A + +L L V+ + G S F Y V W ++ + +MR + H+ + FF+++STG L++ + D Q+ G +++ S+I + + FY S ++++ P++ +R + ++++ +G +++ + + G + F + +E +R Q S + ++ SS P+I++ +A FVL F ++ L G V+ L+ PL SL F+R MA+ + + +LD + RD G A G + F QV F Y A +++ ++ +P G T+ALVG +GSGKST+ L+ RFY Q+G I LDG D+ + LS LR + VSQ LF +I +NIAY + S E I AA+ A A +FI ++ GL T +GE G++LSGGQRQR+A+ARALL+D +L+LDEATSA+D E+E AIQ +L L K RT ++IAHRLST+ A+ I+VV +G+I+E+GNH LLA G Y +Q G Sbjct: 55 GFGKADRSVLLWMPLVVIGLMLVRGASGFVSSYCVSW--VSGKVVMNMRRRLFSHIMGMPVAFFDQQSTGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSIAMRMVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFEQVSNRMRQQGMKMVSASSISDPIIQL--IASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDMEQE-RDTGK-REIERAKGELEFRQVNFAYPARENLALKNINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATNGAYAQLHRMQFG 581
BLAST of abc transporter vs. SwissProt
Match: gi|46396384|sp|Q87R16.1|MSBA_VIBPA (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 285.804 bits (730), Expect = 1.182e-87 Identity = 188/578 (32.53%), Postives = 300/578 (51.90%), Query Frame = 0 Query: 2 RYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVV-NQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 ++ R Y+ +I+A + +IN + D L+ +D N D+ F+ + L L + G S F Y + W ++ ++ +R + H + +F++ TG+L++ + D Q+ +++ S+I + + FY S ++L+ F+ PV+ WG +R + +++ +G +++ + + G + S+ + IE +R + S + + + +A P+I+M + L ++ +L G + V+ L+ PL +L F+R MA+++ + L+D + ++EG T A G VS V F Y +E S ++P G T+ALVG +GSGKST+ L RFY +GSI LDG DI D L LR VSQ LF +I +NIAY + K I AA+ A A EFI ++ GL T +GE G LSGGQRQR+A+ARALL+D VL+LDEATSA+D E+E AIQ +L L K +TV++IAHRLST+ A+ I+VV +G I+E+GNH L+A G Y +Q G Sbjct: 18 QFIRLYKSGLIVAVIALVINAISDTYMISLLKPLLDEGFGNADSDFL----------RTLPLIIFVMMFIRGTSGFVSTYCLSW--VSGNVVMLVRRMVFNHFMHMPVSYFDKEKTGNLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNSWQLSLVLFAVAPVVAWGIGVVSKRFRKISKNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIERQRFDKVSNQMRQQSMKLVTAQAAANPIIQMIASFAIVAVLYLASIDSIKEQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAASQTLFALIDLEPE-KNEGKYT-VERAKGDVSVKDVSFTYVGSEKPALEHVSFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVDSGSITLDGRDIRDYELKNLREQFALVSQNVHLFNDTIANNIAYATEDKYERSDIEHAAKLAHAMEFINKMENGLDTMIGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKDKTVLVIAHRLSTIEKADEILVVDDGAIIERGNHADLIAKNGAYAQLHRIQFG 581
BLAST of abc transporter vs. SwissProt
Match: gi|81336962|sp|Q4QPI4.1|MSBA_HAEI8 (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 284.648 bits (727), Expect = 3.585e-87 Identity = 192/533 (36.02%), Postives = 286/533 (53.66%), Query Frame = 0 Query: 51 GFETAHQ---QILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRM-AVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGA-GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 GF A+ +I+A V+ I G + F Y + W ++ + MR ++H+ + FF+ STG L++ + D + G +++ +I++ AV FY S + L+ F P+I + L ++++ +G L++ + + G + SF + +E ER + S + + S PV+++ A LA F+ L G++ V+ ++ PL SL F+R MA+ + + +LD + +D GT +A A G + F V F Y+ + + S VP G T+ALVG +GSGKST+ L+ RFY + G I LDGV+I D LS LR VSQ+ LF +I +NIAY K S E I AA+ A A EFIE+LPQG T +GE G LSGGQRQRLA+ARALL++ VL+LDEATSA+D E+E AIQ +L L K RTVI+IAHRLST+ +A+ I+V+ +G+I E+GNH LL G Y + +Q G Sbjct: 59 GFGKANHSFLKIMAFVVVGMIILRGVTNFISNYCLAW--VSGKVVMTMRRRLFKHLMFMPVSFFDRNSTGKLLSRITYDSEMIASSSSGSLITIVREGAYIISLLAVMFYTSWELTLVLFVIGPIIAVLITIVSKIFRKLSKNLQDSMGELTATTEQMLKGHKVVISFGGQFVEEERFNKVSNNMRRKGMKMVTADSISDPVVQIIASLALVAVLFLATTPLIAEDNLSAGSFTVVFSSMLAMMRPLKSLTNVNSQFQRGMAACQTLFAILDLEPE-KDNGT-YKAEPAKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTIANNIAYAAQDKYSREEIIAAAKAAYALEFIEKLPQGFDTVIGENGASLSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQSALDELKKDRTVIVIAHRLSTIENADEILVIDHGEIRERGNHKALLEQNGAYKQLYSMQFSG 587
BLAST of abc transporter vs. SwissProt
Match: gi|67468765|sp|Q7N6C6.1|MSBA_PHOLL (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 283.493 bits (724), Expect = 7.821e-87 Identity = 185/533 (34.71%), Postives = 285/533 (53.47%), Query Frame = 0 Query: 51 GFETAHQQILA---LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGG-AGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 GF A +L L V+ I G S F Y + W ++ + MR + HM + FF+++STG L++ + D Q+ +++ S+I + + FY S ++L+ P++ +R + +++ +G +++ + + G + F + +E ER + S + ++ SS P+I++ +A F FVL F + L G V+ L+ PL SL F+R MA+ + + +LD + +D+G ANG + F V F Y +++ S+ +P G +ALVG +GSGKST+ LL RFY G+I LDG D+ + LS LRG + VSQ LF ++ +NIAY + + S E I AA+ A A +FI +L GL T +GE G+LLSGGQRQR+A+ARALL+D VL+LDEATSA+D E+E AIQ +L L K RT ++IAHRLST+ +A+ I+VV +G IVE+G+H +LL G Y +Q G Sbjct: 54 GFGKASSDVLKWMPLIVIALMIMRGLSGFVSSYCISW--VSGKVVMQMRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVLMFYYSWQLSLILIVIAPIVSLVIRVVSKRFRSISKNMQNSMGQVTASAEQMLKGHKEVLIFGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQL--IASFALAFVLYAASFPDIMETLTAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQE-KDDGK-LELKKANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYASENRYSREEIEKAAEMAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLERNGVYSQLHRMQFG 580
BLAST of abc transporter vs. SwissProt
Match: gi|18266858|sp|P35598.3|EXP8_STRPN (RecName: Full=Putative ABC transporter ATP-binding protein exp8; AltName: Full=Exported protein 8) HSP 1 Score: 282.337 bits (721), Expect = 2.660e-86 Identity = 183/558 (32.80%), Postives = 289/558 (51.79%), Query Frame = 0 Query: 39 VVNQDTSFVASFGFETAHQQILALAVLTFFIWAG----ESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFS---------PIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEG---IEAERLRQESAAYADANRRAIAVSSAFI-PVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLD--TTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 V+ VAS + + LAV ++ G +++ QY +L+ ++ + D+R +A+ +M++ M +F++ G +V+ L +D + G ++ F+S AVF +L+ L +L +P+I + +++ + R + ++S+L NI GI I++F E E + + QE YA+ R++A+ + F+ P + + L G+ G++ + + VG + RL PL + Q + AM S R+ L+D T +++ G +A G + F V F Y ++D S V G T+A VG TGSGKS++I +L+RFY Q+G + LD VDI D ELR IG V QEPFL+ G+I+ NIA + S E + AA +A FI+ LPQG + V ERG S GQRQ LA AR + P++L+LDEAT+ +D+ETE+ +Q SL ++ +GRT I IAHRLST+ A I V+ G+I+E G H+ LLA G YH + +Q G Sbjct: 37 VIKSVIPLVASHFIDQYLSNLNQLAVTVLLVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGSIVSRLTNDTETISDMFSG----ILSSFIS-----AVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVNLYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLVYAN---RSVALDALFLRPAMSLLKLLGYAVLMAYFGYRGFSIGITVGTMYAFIQYINRLFDPLIEVTQNFSTLQTAMVSAGRVFALIDERTYEPLQENG---QAKVQEGNIRFEHVCFSYDGKHPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNIAMYQ-ETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLALGGTYHKMYSLQAGA 578
BLAST of abc transporter vs. SwissProt
Match: gi|122064486|sp|Q483B6.1|MSBA1_COLP3 (RecName: Full=Lipid A export ATP-binding/permease protein MsbA 1) HSP 1 Score: 281.182 bits (718), Expect = 1.262e-85 Identity = 177/520 (34.04%), Postives = 274/520 (52.69%), Query Frame = 0 Query: 62 LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGF--KTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGA------------GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567 L ++ F G + F Y + W + ++ AD+R +EH+ + F ++ STG L++ + D Q+ + ++Q +I + + FY S ++L+ P+I +R + +++ +G +++ + G + +F + E R + + + A SA +P+I+ V+A F FV +L + G + ++ LL PL L F++ MA+ I +LD + +D G + A+GT+SF V F Y+ + D + ++ G TLALVG +GSGKST LLLRFY A G I +D +I L +LR +VSQ+ LF ++ +NIAYG P+A+ I AA+ A EF E + QGL T +GE G LLSGGQRQR+A+ARALL D L+LDEATSA+D E+E IQ +L+ L + RT I+IAHRLST+ +A++I+V+ GKIVEQGNH +LLA +G Y Sbjct: 80 LFIIVAFTVRGIAHFIANYCLAW--VGNNVVADLRQKLFEHIMSMPVAFHDQTSTGSLISKITFDTEQVLNSVSKSILTIVQQSAFIIGLLGLMFYYSWQLSLIFLLITPIIAVIVSVVSKRFRKVSKNIQGAMGEVTTAAEQTFNGHKVVLTFGGQQREFSRFAKINKHNRQQRMKMRATKSASVPIIQ--VIASFALAFVFYAITSDSLRDSISPGTFVSIITYMTMLLRPLKMLTNVNSEFQQGMAACTSIFSILDHEKE-KDNGDK-QLERASGTLSFKHVDFSYKNTNTMTTSDKEQDTKLALNDITFDLAPGETLALVGRSGSGKSTASSLLLRFYDATRGEILIDDTNIEQFQLKDLRKQFSYVSQQVVLFNDTLANNIAYGKPEATEAEIIEAAKSAHVMEFAEHMEQGLETNIGENGALLSGGQRQRVAIARALLCDTPFLILDEATSALDTESERHIQDALQTLQQNRTSIVIAHRLSTIENADKIIVMEQGKIVEQGNHQSLLAKQGAY 593
BLAST of abc transporter vs. SwissProt
Match: gi|1723607|sp|P54719.1|YFIC_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiC) HSP 1 Score: 281.182 bits (718), Expect = 1.298e-85 Identity = 182/568 (32.04%), Postives = 306/568 (53.87%), Query Frame = 0 Query: 11 VILASASSIINKLFDIAPEILIGIAID-VVVNQDTSFVASFGFETAHQQILALAVL-TFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFV--LGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574 +IL +I+ +F + +IG AID +V + S G +LA+ ++ + +W FQ ++++ ++Q MR + H+ + FF+++ G+L++ + +D+ + L+ ++ ++ + AV Y+SPL+ L+ + IPV+ + R L+ + ++ +G L+ ++ ++ G IK+++ E +++AA + A +S FIP + M L T + +GG L G + +G+ V +++ PL LA + A+A R+ +LD + DE A G++ F V F Y G ++ VP G ++A VG TG+GK+T+ LL RFY G I +DG DI L + LR +GFV Q+ FLF+G+IR+NI YG AS + + AA+ A A FIERLP+G T + + G +S GQ+Q +++ARA+L DP +L+LDEATS +D TE IQ +L RL +GRT ++IAHRL+T+ A++IVV+ NG+++E+G+HD L+ KG Y + Q Sbjct: 49 LILVMLMVVISAIFGLLGPFVIGKAIDHFIVGKTVS-----GLIPVLLLLLAIYIIQSLSLW-----FQNYWMI---TISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSSTLNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSREKQITAEFLEKNAALKTSGFWAQTIS-GFIPKV-MNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPLNDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYESQ 601
BLAST of abc transporter vs. SwissProt
Match: gi|67468764|sp|Q7MJ07.2|MSBA_VIBVY (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 279.256 bits (713), Expect = 3.431e-85 Identity = 175/527 (33.21%), Postives = 278/527 (52.75%), Query Frame = 0 Query: 53 ETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYR-AGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY--GDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 E+ + L L V G S F Y + W ++ ++ +R + H + + +F++ +G L++ + D Q+ +++ S+I + + FY S ++L+ PV+ W + +R + +++ +G+++S + + G + S+ + +E R S + + I +A P+I+M + L T+ +L G + V+ L+ PL +L F+R MA+ + + L+D + ++ GT + A G V+ + F Y A + S ++P G T+ALVG +GSGKST+ L RFY +G I+LDGVD+ D L LR VSQ LF +I +NIAY GD K S E I AA+ A A EFI ++ GL T VGE G LSGGQRQR+A+ARALL+D VL+LDEATSA+D E+E AIQ +L L K +TV++IAHRLST+ A++I+V+ +G +VE+G+H L+ G Y +Q G Sbjct: 60 ESDFLRTLPLLVFGLMFIRGISSFVSTYCLSW--VSGNVVMQVRRMVFNHYMQMPVSYFDKEKSGSLLSRITYDSEQVSAATSQALVSIVREGTSIIGLLVLMFYNSWQLSLVLILVAPVVAWAIGFVSKRFRKISKNMQTTMGIVTSSAEQMLKGHKVVLSYGGQEVEKSRFDVVSNQMRQQSMKLITAQAAANPIIQMIASIAIVVVLYLASVDTIKDQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAAAQTLFALVDLEPE-KNTGTYS-VERAKGEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGD-KYSREDIERAAELAHAMEFISKMENGLDTVVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGAVVERGSHSELIEKDGAYAQLHRIQFG 581
BLAST of abc transporter vs. nr
Match: gi|499713406|ref|WP_011394140.1| (ABC transporter ATP-binding protein [Hahella chejuensis] >gi|83631096|gb|ABC27063.1| ABC-type multidrug transport system, ATPase and permease components [Hahella chejuensis KCTC 2396]) HSP 1 Score: 860.522 bits (2222), Expect = 0.000e+0 Identity = 418/577 (72.44%), Postives = 488/577 (84.58%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I A + SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF T QQILAL VLTFFIWAGES+F+Y +L++WRNL Q LQAD+R +AY+H+QR M FFE RS+G LV+++NDDVNQLERFLDGGAN+LIQVFV+V+AVG VF +SP IALLAF+PIP+I+WGAF+FL+RA+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E E+ERLR+ S AY ANR+AIAVSSAFIPVIRMA+LAGFL TF +GG + L+GEL GAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILG+++T ID+RDEG+ + G V F V F Y AG G+E+ +++V G+TLALVGATGSGKSTLIKLLLRFY + GSI +DGV I LPL ELRGAIG VSQ+ FLFEGSIR+NIAYG P AS E I AA+ AEAWEFI RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+ +A GRTV+MIAHRLST+VHA+ IVVV +GK+VEQG+H LL KG Y SQW VQTGG Sbjct: 35 LRYARGYRRRIIAAGSCSIINKLFDIAPEILIGIAIDVVVNKEQSFVAAMGFNTPQQQILALGVLTFFIWAGESIFEYLHLIMWRNLGQVLQADLRQDAYDHVQRLDMAFFESRSSGQLVSIINDDVNQLERFLDGGANNLIQVFVTVVAVGGVFLAISPFIALLAFTPIPIIVWGAFFFLKRANPLYADVREKVGGLASRLANNIGGIATIKSFTAEAQESERLREASDAYVQANRKAIAVSSAFIPVIRMAILAGFLATFTVGGLQALSGELNAGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGVIETPIDVRDEGSHSLPQPVRGEVDFQNVSFEYAAGAGGVENVNLQVKAGSTLALVGATGSGKSTLIKLLLRFYRPRQGSILVDGVPIEQLPLKELRGAIGLVSQDVFLFEGSIRENIAYGRPTASEEEIIAAARTAEAWEFIARLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKHIAHGRTVVMIAHRLSTIVHADNIVVVDHGKVVEQGDHRQLLERKGMYWSQWQVQTGG 611
BLAST of abc transporter vs. nr
Match: gi|1234072129|ref|WP_094706695.1| (ABC transporter ATP-binding protein [Hahella sp. CCB-MM4] >gi|1233736063|gb|OZG74740.1| ABC transporter [Hahella sp. CCB-MM4]) HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0 Identity = 427/577 (74.00%), Postives = 491/577 (85.10%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I AS SIINKLFDIAPEILIGIAIDVVVNQ+ SFVA+ GF T +QIL L +LTFFIWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+QR M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVGAVFF LSP IALLAF+PIP+IIWGAFYFLR+A+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E +E++RLR+ S Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF L G+L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T + G VSF QV F Y AG G+ + V GTTLALVGATGSGKSTLIKLLLRFY Q+G I LDG+ I LPL LRGAIG VSQ+ FLFEG+IRDNI+YG P A +AI AA+ AEAWEFI+RLPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+ +G+IVEQGNH+ LL +G Y SQW VQTGG Sbjct: 17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNQEESFVAAMGFSTPKEQILILGLLTFFIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQRLDMAFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGAVFFVLSPFIALLAFTPIPIIIWGAFYFLRKATPLYADVREKVGGLASRLANNIGGIATIKSFTAELMESQRLRESSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGDLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTRTPDAPIKGEVSFQQVDFEYAAGAGGVHRVDLNVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKTLRGAIGLVSQDVFLFEGTIRDNISYGHPGAGDDAIIDAARTAEAWEFIQRLPQGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEHGRIVEQGNHEQLLERRGAYWSQWQVQTGG 593
BLAST of abc transporter vs. nr
Match: gi|521078328|ref|WP_020409235.1| (ABC transporter ATP-binding protein [Hahella ganghwensis]) HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0 Identity = 421/577 (72.96%), Postives = 491/577 (85.10%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I AS SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF +A +QI+ L +LTF IWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+Q+ M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVG VFF LSP+IALLAF+PIP+IIWGAFYFLR+A+PLYADVR++VG L+SRL NNIGGIATIKSFT+E +E+ERLR S Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF L G L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T + G VSF +V F Y AG G++ +EV GTTLALVGATGSGKSTLIKLLLRFY Q+G I LDG+ I LPL LRGAIG VSQ+ FLFEG+IRDNIAYG P A +AI AA+ AEAWEFI+RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+ G++VEQGNH++LL +G Y SQW VQTGG Sbjct: 17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNKEESFVAALGFTSAKEQIIVLGILTFLIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQKLDMSFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGGVFFVLSPVIALLAFTPIPIIIWGAFYFLRKATPLYADVRDQVGGLASRLANNIGGIATIKSFTAEPMESERLRDSSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGSLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTQTPENPIKGEVSFRKVNFEYAAGAGGVQGIDLEVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKVLRGAIGLVSQDVFLFEGTIRDNIAYGKPGAEDDAIIDAAKTAEAWEFIQRLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEQGRVVEQGNHESLLERRGAYWSQWQVQTGG 593
BLAST of abc transporter vs. nr
Match: gi|497407268|ref|WP_009721466.1| (ABC transporter ATP-binding protein [Halomonas sp. TD01] >gi|338766621|gb|EGP21538.1| ABC transporter, transmembrane region [Halomonas sp. TD01]) HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0 Identity = 414/578 (71.63%), Postives = 469/578 (81.14%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE TA A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTAPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEQGRVAERGNHSSLLVADGHYAAQWRVQTGAA 607
BLAST of abc transporter vs. nr
Match: gi|740692214|ref|WP_038477503.1| (ABC transporter ATP-binding protein [Halomonas campaniensis] >gi|641740248|gb|AIA73526.1| ABC transporter [Halomonas campaniensis]) HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1178484832|ref|WP_083006664.1| (ABC transporter ATP-binding protein [Halomonas sp. GT]) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 412/578 (71.28%), Postives = 467/578 (80.80%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 607
BLAST of abc transporter vs. nr
Match: gi|1240438563|ref|WP_095603966.1| (ABC transporter ATP-binding protein [Halomonas sp. WN018] >gi|1240183621|gb|PAU71501.1| ABC transporter [Halomonas sp. WN018]) HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPIIEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1215204375|ref|WP_089039591.1| (ABC transporter ATP-binding protein [Halomonas sp. N3-2A] >gi|1214955929|gb|ASK20384.1| ABC transporter [Halomonas sp. N3-2A]) HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 467/578 (80.80%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y A G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYAASQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGSA 601
BLAST of abc transporter vs. nr
Match: gi|258618592|gb|ACV84075.1| (ABC-type multidrug transport system protein [Halomonas sp. HTNK1]) HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0 Identity = 410/578 (70.93%), Postives = 464/578 (80.28%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++D+ + G V F V F Y A G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I + + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDQSAMPLTAPVKGEVRFEAVSFHYAASQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITQVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1221668980|ref|WP_089797355.1| (ABC transporter ATP-binding protein [Halomonas korlensis]) HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0 Identity = 410/576 (71.18%), Postives = 470/576 (81.60%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 ++YARGYRRR+I ASA SIINKLFDIAPEILIG+AIDVVVNQ+TSFVA GFE+A +QI+ L VLTFFIWAGES+F+Y + VLWRNLAQ LQ+D+R +AYEH QR M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+I+WGAFYF R+A PLYADVRE+VG LSSRL NN+ GIATIKSFT+E EAERLR+ S AY ANRRAI +SSAFIPVIRMA+L+GFL TF +GG L G+L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + + D G A G V FA+V FRY G G+ D + VP G TLALVGATGSGKSTLIKLLLRF+ AQ+G I++DG I +L L+ LRGAIG VSQ+ +LFEG++RDNIAYG P AS E + AAQ AEAW FI+ LP GL TAVGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL ++ GRTVIMIAHRLST+VHA+ I V+ G++VEQG H LLA G Y +QW VQTG Sbjct: 29 LKYARGYRRRIIAASACSIINKLFDIAPEILIGVAIDVVVNQETSFVARLGFESAQEQIVMLGVLTFFIWAGESIFEYLFQVLWRNLAQRLQSDLRQDAYEHAQRLDMSFFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVVVTVLAVGAVFFVLSPLIALLAFTPIPLIVWGAFYFQRKAGPLYADVREKVGDLSSRLSNNLAGIATIKSFTAETREAERLREASEAYVTANRRAIRISSAFIPVIRMAILSGFLATFTVGGMMALRGDLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLATPVQVHDRGGRDLAETVRGEVEFAKVSFRYANSGEGVSDVQLLVPAGHTLALVGATGSGKSTLIKLLLRFHDAQSGDIRVDGQSIRELNLASLRGAIGLVSQDVYLFEGTVRDNIAYGRPDASEEDVIKAAQTAEAWSFIQALPDGLQTAVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLAKIGHGRTVIMIAHRLSTIVHADEIAVIHGGRVVEQGRHAELLAHDGRYAAQWRVQTG 604 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2803_size12270:6100..7836- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2803_size12270-processed-gene-0.3 ID=snap_masked-scaffold2803_size12270-processed-gene-0.3|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2803_size12270:6100..7836- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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