abc transporter, snap_masked-scaffold2803_size12270-processed-gene-0.3 (gene) Tigriopus kingsejongensis

Overview
Nameabc transporter
Unique Namesnap_masked-scaffold2803_size12270-processed-gene-0.3
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 249.595 bits (636), Expect = 1.682e-74
Identity = 183/587 (31.18%), Postives = 294/587 (50.09%), Query Frame = 0
Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQIL------ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDAN-GTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAG-SIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            Y   +   +I A  S+I    F+I   +L+G  ++VV +  +  V S   E  H   L       L+++ F  +A +S+    Y+     L + + A +R + +  +  Q + FF+E  TG++V+ L+ DV + +      +  G     Q    ++++    + +SP +       +P +I G  Y       L    + +V   ++  +  I  I T++ F  E  E E   +E     D N         F       + +  L T   GG+   +  L  G     +   Q +   +T ++       + MAS  RI   ++    I   G       +  G V F  + F Y  R   A ++DFS+ +P   T+ALVG +G GK+T+  LL RFY    G S+++DG++I DL  S LRG AIG+++QEP LF  S+ +NI YG P A+   +  AA+ A   +F+   P G  T +GERG+ +SGGQ+QR+A+ARALLK+P +L+LDEATSA+D E+E  +Q +L +L+KGRT ++IAHRLST+ +A+ I V+  G + E G H   L  KG  +S+ + Q
Sbjct:   95 YITPHFHYLICAVCSAIAVAYFNIKIPLLLGDIVNVVSSYISETVLS---EMRHDNFLREMKEPTLSMIKF--YAAQSICTIAYIYSLACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSM----YMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTH-AALKRKGGIYSRLIEQ 671          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 219.935 bits (559), Expect = 4.945e-62
Identity = 133/356 (37.36%), Postives = 199/356 (55.90%), Query Frame = 0
Query:  211 TIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTL-NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANG----TVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            T+K F +E  E ++  +    Y  A+ +    S + +   + A+ +  L   ++   K + NG L VG   ++  L  +L  PL  L        +++   + +  L+ T   I     AT  +  N     +++F  V F Y          S  V  G T+A+VG +GSGKSTL++LL RFY  Q GSIK+   +IN++ L  LR  I  V Q+  LF  +I  NI YG+   S E +   A+ AE    I   PQG  T VGERG+ LSGG++QR+A+ARA LKD  +++ DEATS++D+ TE  I ++L+R+  G+T I+IAHRLSTVVHA+ I V++NGK++E+G H+ LL
Sbjct:  232 TVKYFNNEAYECQQYDKSLLKYETASLKTTE-SLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 201.83 bits (512), Expect = 2.539e-56
Identity = 107/237 (45.15%), Postives = 154/237 (64.98%), Query Frame = 0
Query:  331 RASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            +A    G ++F  V F Y  R     +   S E   G TLALVG +G GKST+I+L+ RFY    G + +DG DI  L    LR  IG V QEP LFE SI++NI  G   + S + I    + A A++FI+RLP+   T VGE+G LLSGGQ+QR+A+ARAL+++P +L+LDEA+SA+D+++E  +Q +L +  KGRT I++AHRLST+  A+ I+V+ +G  V+ G H++L + K
Sbjct:  237 KAPPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNK 473          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 175.252 bits (443), Expect = 1.288e-46
Identity = 176/604 (29.14%), Postives = 280/604 (46.36%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASS-IINKLFDIAPEILIGIAIDVVVNQD--TSFVASFGFETAHQQILALAVLTFFIWAGESL---------FQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVI----IWGAFYFLRRASPLYADVRERVGLLSSR--------LQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTF------VLGGFKTLNGELGVG-AYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTID---IRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP--KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            M Y +     +++A +S  +I +  +    +L+    D V+  +  T    +   +  +Q I+   V    I+ G  L         F + YL      AQ L   M     E + +  M FF+    G ++  L  D++ L+  +       I  F+ V         LS LI ++  +P+ +I    I   ++F++R   +Y     ++  L S             + G ATI+++     ++     ES +  D N++A     VS+ ++ V R+ V+ G L  F      VLG      G +G+  +Y + V  T  L W L  +A  +   E  + +  RI        +   I ++          G +SF     RYR G    +++ S+++ GG  + +VG TG+GKS+    + R      G+I +DGVDI  L L +LR  I  + Q+P LF GS+R N+   DP  + +   I  A   +    FI+ L  GL   V E G  LS GQRQ + LARALL+  +VL+LDEAT+AVD ET+  IQ+++R   K  TVI IAHRL+T++   +I+V+ NG+ VE G    LLA K
Sbjct:  974 MHYVKNMSIILVVACSSCFVIYQALNTLSNVLLAWWSDAVMKIEVRTGLNDNRTLDEINQDIMDXQVYYLSIYGGYCLGQGIVVVMGFVFMYLAC-MEAAQRLHNQM----LESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGV---------LSSLIVVMVTTPVFIIPASLIIICYFFIQR---IYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYG----QSSTFISESESKVDDNQKANFPATVSNRWLAV-RLEVV-GNLIVFTAALLAVLGRDSLSPGLVGLSVSYALAV--TASLNW-LVRMASEV---ETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADK 1545          

HSP 2 Score: 105.531 bits (262), Expect = 9.173e-24
Identity = 83/308 (26.95%), Postives = 156/308 (50.65%), Query Frame = 0
Query:  281 VLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRAS--DANGTVSFAQVGFRYRAGGAG--IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY-----GDPKASL-EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQ----RSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            V + L   L +PL+ L   I     A  S +RI   +++  +I +E    + +  D    ++  +   ++ +      + D S+++  G+ +A+VG  GSGKS+L+  +L      +G I +             RG+I + +Q+ ++   S+++NI +     GD    + EA  L +        ++ LP G  T +GE+GI LSGGQ+QR++LARA+     + +LD+  SAVD+     I      S   + K +T +M+ H ++ +   ++I+V+ +G++ E G +  LL  KG + ++++VQ
Sbjct:  577 VCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSE-EIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITV-------------RGSIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSD-------LDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAF-AEFIVQ 862          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12")

HSP 1 Score: 167.548 bits (423), Expect = 5.368e-46
Identity = 126/434 (29.03%), Postives = 213/434 (49.08%), Query Frame = 0
Query:   88 AQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAF---------IPVIRMAVLAGFLCT---FVLGGFKTL---NGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG-DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEAT 503
             Q + A +R   +  + +Q   FF+   TG+LV  L+ D   + + L    +  ++  +  +A G +  ++SP +AL+  S +P +   A +  ++   +  + +  +   +   Q  I  I T+++F  E  E+    ++ +   D   +   + + F         + ++ +    GFL T     +G   +    +G +G+G  GV  F  + +               +A+ +  RI  ++D T  +  +         NG ++F +VGF Y  R   +  +  ++ +     LA+VG+    KSTL  LLLR Y    G + +DG DI +L  + LR  IG V QEP LF G+I++NI YG + K   E I  AA+++ A +FI   P    T VGERG+LLSGGQ+QR+A+A A+LK+PQ L+LDEAT
Sbjct:   62 GQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIM---------------KALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 165.236 bits (417), Expect = 2.919e-43
Identity = 123/406 (30.30%), Postives = 203/406 (50.00%), Query Frame = 0
Query:  185 SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA--IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGEL-GVGAYGVLV----FLTQRLLWPLTSLAQTIDLFERAMASTRRILGL--LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTL-LAAKGHYHSQWMVQTGG 577
            SP+Y+   E           ++ G+++I+++ ++     +   ES    D N+R    ++ +     +R+  + G LC F        N EL G G  G+++     LTQ L W    L +     E  + +  R+     LD   + R     +    + G V F     RY+A    + +  +  + GG  + +VG TG+GKS+L   L R   A  G I +DG DI+ L L +LR ++  + QEP LF G++R N+   DP+ +     I          E+I  L  GL+ ++ E G+ LS GQRQ + LARALL+  ++L+LDEAT+AVD ET+  IQ ++R      T++ IAHRL T++  ++I+V+  G ++E G+ + L + +   +HS  M+   G
Sbjct: 1016 SPIYSHFSE-----------SLNGLSSIRAYGAQS----KFILESINKIDTNQRCNYPSIIANRWLAMRLETI-GNLCIFGXAILTMTNPELVGPGKVGLVISYALILTQNLNW----LXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHS--MINAAG 1396          

HSP 2 Score: 110.923 bits (276), Expect = 1.437e-25
Identity = 72/252 (28.57%), Postives = 123/252 (48.81%), Query Frame = 0
Query:  325 DEGTATRASDANGTVSFAQVGFRYRAGGA--GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRR----LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK 564
            D+G A    D N         F++    +   + + ++ +  G+  A+VG  GSGKS+LI  +L     ++G +++             +G I +V QE ++   S+++NI +G P         LE   L          +  LP G  T +GERGI LSGGQRQR++LARA+  D  V + D   SA+D++   ++  ++      + K +T +++ H +S + H   I V+  G+I+ +G +  LL  K
Sbjct:  548 DQGDAIVIRDGN---------FKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRI-------------KGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYD-------LSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEKK 770          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2")

HSP 1 Score: 156.377 bits (394), Expect = 2.778e-40
Identity = 93/257 (36.19%), Postives = 141/257 (54.86%), Query Frame = 0
Query:  322 DIRDEGTATRASDANGTVSFAQV----GFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKA--SLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAK-GHYHSQW 571
            D+R  G   +       + F  V     F YR      + FS+E+P    + + G +GSGKSTL+  ++R      GSI ++G++IN +PLS LR  +  + Q+  LF G+IR N+   DP+   S E I     +A+  + +   P GL T V E G   S GQRQ L + +ALL+ P+V++LDE+TSA+D   E A+  +L    +  T+I +AHRLS +V  ER++V+  G+I+E GN   LL    G + + W
Sbjct: 1630 DVRVSGDFLQNDSEGLIIRFNSVCLAPSFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNL---DPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALW 1883          

HSP 2 Score: 100.138 bits (248), Expect = 4.734e-22
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 0
Query:  355 IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP---KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNE-TEAAIQRSLRR--LAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQG 555
            ++  ++E+  G+   ++G +GSGK+ LI  L+       GS+K +  D            +  + Q P+L   +I+DNI  G P   K   + I     Q +    I+ LP G  T +GERG+LLSGGQRQRLA+AR L        +D   S++D++ T    +  + +  L + RTV +   RL  +  A+ IV + +G I  QG
Sbjct:  745 LQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPD-----------TVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTD----IDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQG 936          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 152.14 bits (383), Expect = 7.454e-39
Identity = 148/584 (25.34%), Postives = 255/584 (43.66%), Query Frame = 0
Query:   12 ILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILA-LAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLD-------GGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRR-----ASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVI--------RMAVLAGFLCTFVLGGFKTLN------GELGVGAYGVLVFLTQRLLWPL---TSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAW--EFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562
            ILA +  II+++      + + +  D   N D  +         H  I A L V   FI    +L     L+       D    +    ++ + +  M FF+    G ++     D+  L+  +         G    I   V++I++    F +  L   + +  I ++   +   L+R      SP+Y           S     + GI T+++++           E A Y++  RR         PVI        R+ ++  F+  F    F  L+      G+LG+     L  +T  L W +   + L   I   ER    + +     +   ++ ++     +    G ++   +  +YR     +  D +V +  G  + +VG TGSGKSTL   L R     +G I +DGVDI  + L  LR  +  + Q+P LF G++R N+   DP    + + L      A+  +F++    GL   + E G  +S GQRQ + LARALL+  +VL++DEAT+AVD+ET+  IQ++++   +  TV+ IAHRL TV+   +I+V+ +G I+E  +   LL+
Sbjct: 1437 ILAFSFFIISQILATGSSVWLSVWSDAKNNTDIYY---------HLGIYAGLGVSNIFISTAGTLILSLSLL-------DASRILHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIAT-VTIISINVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIY-----------SHFGETLSGINTVRAYS----------LEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFI-IFASALFSVLSRDTITPGQLGLNVSSSLA-ITSILSWVIRMYSDLENNIVAVERIKEYSNK---ESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972          

HSP 2 Score: 98.5969 bits (244), Expect = 1.644e-21
Identity = 64/215 (29.77%), Postives = 110/215 (51.16%), Query Frame = 0
Query:  356 EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP------KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSL---RRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            +D S++V  G  +A++G  GSGKS+LI  LL       G +       N +   E+ G++ +  Q  ++   S++DNI +G           L+A +L +        +E  P G  T +GE+GI LSGGQ+QR++LARA+     +  LD+  + VD+     +   +     L +G+T I++ H LS +   + I  + +G+I E+G +  L+
Sbjct: 1165 KDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESD-------MEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELM 1362          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 150.599 bits (379), Expect = 2.008e-38
Identity = 142/495 (28.69%), Postives = 228/495 (46.06%), Query Frame = 0
Query:   91 LQADMRLNA--YEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLI-QVF-----VSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRA-----SPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA---IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGL----LDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASL--EAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLA 562
            L A M+++    E++ R  + FF+    G ++   + D++     L      +I Q F     + +I +   +F++  L A++ ++ I          ++R      SP+Y+   E            + GI TI++F   G+       E+    D N +      +SS ++ V R+  L   L  FV     T  G    G  G+ +     +   L  L       E  M S  RI        +   D+ +        + +G + F     RYR G    ++  +  +  G  + +VG TG+GKS+L   L R      GSI +DG +I  L L +LR  I  + Q+P LF GS+R N+   DP  +     I +A + +    F+  L  GL+ +V E G  LS GQRQ + LARA+L+  Q+LVLDEAT+A+D ET+  IQ ++R   K  TV+ IAHR++T++ + RI+V+  G I E  +   LLA
Sbjct: 1029 LNASMKIHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPIYSHFAE-----------TLTGIPTIRAF---GM-VHHFIDENVNKIDFNAKCYFPTVISSRWLAV-RLETLGNILVIFVALFSITSRGTTDPGMVGLSLSYALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPE-HGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL---DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLA 1503          

HSP 2 Score: 100.523 bits (249), Expect = 2.974e-22
Identity = 74/255 (29.02%), Postives = 121/255 (47.45%), Query Frame = 0
Query:  330 TRASDANGTVSFAQVGFRYRA--GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG---DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-----EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQ 574
            +  S  +  V    V   +    G   +ED  +++  G+ +A+VG  GSGKS+L+  +L       GSI +DG  I             +  Q+P+L   ++R+NI +G   + K     I   A   +    ++ LP G  T +GERGI LSGGQ+ R++LAR    +  + +LD+  SAVD        E  I  S   L K +T I + H    +   ++I+V+ NG I E G +  L+  +    +Q+++ 
Sbjct:  608 SHESQGSHAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPD----LDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVIS-SQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLIN 844          
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 147.517 bits (371), Expect = 2.348e-37
Identity = 132/480 (27.50%), Postives = 220/480 (45.83%), Query Frame = 0
Query:  105 RQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRAS--PLYADVRERVGLLS-----SRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGE-LGVGAYGVLVF----LTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD--ANGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKAS------LEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAA 563
            R  + FF+    G ++   + D   ++  L    N  +     V     V  Y  P I L+   P+     G FY+  +    P   D++ R+  +S           + G+  I++  S+  +   L  E     +   R  A S++    IR+  L G +  F +     +N E +  G  G+ V     +T RL   + S  +T    E+ + +  R    +D   +    G      +    G V F  +  RY+     +    + +      + +VG TG+GKS+LI  L R  S   G I +DG+ I  LPL + R     + Q+PF+F G+IR N+   DP A        ++I L+      + F      GL T +G+ G  LS GQ+Q L LARA++   +V+ +DEAT++VD ET+  I+  L+     +TVI IAHR+ TV++++RI V++NG+I+E+G  + L+ +
Sbjct:  984 RAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPWI-LIVLLPL-----GLFYYEIQCKYRPGSRDLK-RISSVSLSPIYEHFNETVHGLKIIRA--SKASQRFLLENEELVECNQKARYAAFSASLWLEIRLQ-LIGSIVVFSIALISVINFESVDAGLVGLAVSYALGMTXRLAEVVVSFTET----EKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELWDSIKLSYLYNIIYSFGS---SGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKS 1443          

HSP 2 Score: 87.0409 bits (214), Expect = 5.410e-18
Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 0
Query:  322 DIRDEGTATRASDANGT----VSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVD-NETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKI--VEQGNH 557
            + +DE T  +AS    T    +   +  F +      + +  V +     + ++G  GSGK+T +  +L     Q+G I +        PLS     I +V Q P++   SIRDNI +G+     +   +        +F + L +G HT  GE+G  LSGGQ+ R+ALARA+ +D  + ++D+  S++D N         +  L K +T I+  H    +  A  ++ + +G+   V+Q  H
Sbjct:  615 EYKDENT--KASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISVRD------PLS----GIAYVQQVPWIQNKSIRDNILFGEMYIHGKYTKVIKACCLDHDF-KHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844          
BLAST of abc transporter vs. SwissProt
Match: gi|46396427|sp|Q8DAV2.1|MSBA_VIBVU (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 279.256 bits (713), Expect = 3.773e-85
Identity = 175/527 (33.21%), Postives = 278/527 (52.75%), Query Frame = 0
Query:   53 ETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYR-AGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY--GDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            E+   + L L V       G S F   Y + W  ++ ++   +R   + H  +  + +F++  +G L++ +  D  Q+          +++   S+I +  + FY S  ++L+     PV+ W   +  +R   +  +++  +G+++S  +  + G   + S+  + +E  R    S      + + I   +A  P+I+M      +    L    T+  +L  G + V+      L+ PL +L      F+R MA+ + +  L+D   + ++ GT +    A G V+   + F Y  A    +   S ++P G T+ALVG +GSGKST+  L  RFY   +G I+LDGVD+ D  L  LR     VSQ   LF  +I +NIAY  GD K S E I  AA+ A A EFI ++  GL T VGE G  LSGGQRQR+A+ARALL+D  VL+LDEATSA+D E+E AIQ +L  L K +TV++IAHRLST+  A++I+V+ +G +VE+G+H  L+   G Y     +Q G
Sbjct:   60 ESDFLRTLPLLVFGLMFIRGISSFVSTYCLSW--VSGNVVMQVRRMVFNHYMQMPVSYFDKEKSGSLLSRITYDSEQVSAATSQALVSIVREGTSIIGLLVLMFYNSWQLSLVLILVAPVVAWAIGFVSKRFRKISKNMQTTMGIVTSSAEQMLKGHKVVLSYGGQEVEKSRFDVVSNQMRQQSMKLITAQAAANPIIQMIASIAIVVVLYLASVDTIKDQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAAAQTLFALVDLEPE-KNTGTYS-VERAKGEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGD-KYSREDIERAAELAHAMEFISKMENGLDTMVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGSHSELIEKDGAYAQLHRIQFG 581          
BLAST of abc transporter vs. SwissProt
Match: gi|122064522|sp|Q0HHH4.1|MSBA_SHESM (RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|122064523|sp|Q0HTS8.1|MSBA_SHESR RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 279.256 bits (713), Expect = 6.388e-85
Identity = 203/591 (34.35%), Postives = 308/591 (52.12%), Query Frame = 0
Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVA-------SFGFETAHQQIL--ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRR---AIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGA-GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSA-QAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP-KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            Y +  +   +L+    I+  L D A    IG  ID   +  T  ++       S GF   +Q +L   + V+  F   G + F   Y + +  ++  L  DMR   +EH     + + ++ +TG+L++ +  D  Q+ R        +++  V+VI +  + FY S  ++L      P++        RR   +   ++  +G +S+  +  I G   + +F  +  E  R     A   D NR     +AV+ A    + M V+  F   FVL      ++  +L  G +  ++     +L P+ +L +    F+R +A+   +  LLDT  +  D GT T    A G + F  V F Y       ++    EV  G TLALVG +GSGKST+  L+ RFY+  ++G IKLD V I D  L  LR  +  VSQ+  LF  +I +NIAY  P +A+ E I  AA  A A EFIE+LP+GL T VGE G+LLSGGQRQR+A+ARA+L+D  VL+LDEATSA+D E+E AIQ+ L  L + RT ++IAHRLST+  A++I+VV  G+IVE+G H +LL   G Y   + +Q G
Sbjct:   19 YLKPMKGMFLLSVCGLIVYGLVDAAFISFIGPFIDKGFSSSTPAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISY--MSARLIMDMRQQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGGQETETARF----AKINDRNRHQNMKLAVAQAVSQPLIM-VIGSFALAFVLYAASLDSMKADLTAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPE-SDTGTYT-VKRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG 600          
BLAST of abc transporter vs. SwissProt
Match: gi|81916845|sp|Q9CXJ4.1|ABCB8_MOUSE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor)

HSP 1 Score: 281.952 bits (720), Expect = 8.430e-85
Identity = 191/568 (33.63%), Postives = 297/568 (52.29%), Query Frame = 0
Query:   11 VILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQE---SAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIR-DEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            ++LA  ++++N    +   +L+G  +++V       + SF  E+       L+V    ++  + L  + YLVL  ++ + +  DMR   +  + RQ + FF+ + TG LV+ L  DV + +      +  G     QV  S++++      LSP + L+     P ++            L    +E++   +      +G + T+++F  E  E ER + E       A+   R IA+   F  +  +A     L T  +GG      +L  G     +  +Q +   + SL+       R +++  R+   +  +  I    G      D  G+++F  V F Y  R G   ++DF++++P G  +ALVG +G GK+T+  LL RFY  +AGS+ LDG D+  L  S LRG  IGF+SQEP LF  +I +NI +G   AS E +  AA++A A EFI   P G  T VGERG  LSGGQ+QRLA+ARAL+K P VL+LDEATSA+D E+E  +Q +L R + GRTV++IAHRLSTV  A  I+V+ANG++ E G H+ LL   G Y
Sbjct:  134 IVLALGAALVN----VQIPLLLGQLVEIVAKYTRDHMGSFVSESRK-----LSVQLLLLYGVQGLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKLVISQGLRSCTQVIGSLVSLS----MLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIAL---FQGLSNIAFNCMVLGTLFIGGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMALSPVIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLY 685          
BLAST of abc transporter vs. SwissProt
Match: gi|81821624|sp|Q5QU36.1|MSBA_IDILO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 275.789 bits (704), Expect = 7.074e-84
Identity = 183/521 (35.12%), Postives = 274/521 (52.59%), Query Frame = 0
Query:   61 ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD-ANGTVSFAQVGFRYRAGG-AGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPK-ASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            AL V   FI  G       Y + W      +   MR   ++HM +  +GF ++ STGDL++ +  D  Q+          L++    V  +  + FY S  ++L+     P++        RR   + + ++  +G +++  +  I G   +     +  E+ R  + +    + N + +   +    VI+           V+  F  + GEL  GA+  L+     LL PL  L      F+R +A+   +  +LD  I++ D+G+  R  D A G + F  V F Y+      +E  + +V  G T+ALVG +GSGKST+  LL RFY  + GSI LDG +IND  L  LR     VSQ   LF  +I +NIAYG  K  S E I  AA+QA   EF + +P+GL T VGE G++LSGGQRQR+A+ARALL+D  +L+LDEATSA+D E+E  IQ +L  L K RT I+IAHRLST+ +A+ I+V+ NG+I+E+G H  LL  +G Y     +Q  G+
Sbjct:   66 ALFVPFIFILRGSLNVASSYFLHWVGFK--VVTKMRQQLFDHMMKLPVGFHDQHSTGDLISKITYDTQQVAEASSRAVLVLVKEGAFVAGLLGLMFYQSWQLSLVFLVIGPLVAKVVGVVSRRFRKVSSRIQTAMGNVTTTAEQMINGHKVVIMHQGQKGESTRFSEINNITRNQNMKLVNTRAISTSVIQFIASLSLSMVLVIASFPEMLGELSAGAFTTLLTAMIMLLRPLKQLTNVNSDFQRGIAAATSVFAILDEPIEV-DKGS--RVVDRAAGDIVFDDVTFSYQKDDEPALEHINFKVDQGKTVALVGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTIANNIAYGASKDVSRENIIKAAEQAYVTEFTDSMPKGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLLDQEGAYFQLHNLQFSGS 581          
BLAST of abc transporter vs. SwissProt
Match: gi|122064529|sp|Q31FG2.1|MSBA_THICR (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 275.404 bits (703), Expect = 9.777e-84
Identity = 177/516 (34.30%), Postives = 284/516 (55.04%), Query Frame = 0
Query:   59 ILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLY----ADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQR--LLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            +L L +   FI  G  + +YF  V+   +AQ    ++R   Y+ M         + STG L++ +  DV Q    L      + +  ++++A+ A   Y S  + L+     P++     +F+ RA  L      D+++ +G ++ RL+  + G   IK + SE  E +R +  + +      + I VS+  +P++++ + A  L   V    + +N E  + A  ++ ++T    +  P+  +       +R MA+ + I  +LDT  +  +       S+ NG + F  V F Y       + +FS+ +P   T ALVG +GSGK+TL  L+ RFY    G+I +DG+ ++++ L+ LR  I FVSQ   LF  +I  NIAYG  +   +AI  AA+ A AWEFIE+LP+GL+T +G+ G LLSGGQRQRLA+ARA LK+  +L++DEATSA+DN++E  IQ ++  L K RTVI+IAHRLST+ +A++IVV+  G + EQG H  L+A    Y
Sbjct:   63 LLPLQLAAVFIVKG--VAEYFSKVMSTWIAQKAIFNIRSELYDKMLCLPQAEHNQTSTGTLMSKVTYDVTQTGNALSEAWIVIARDSLTILALLATLIYYSWQLTLVMLIIGPIVA----FFIDRAGKLMRTSSTDMQDNMGEMTHRLEEGLKGYQDIKIYGSEKYELDRFKASAESLRQNTMKVIKVSALNVPLVQV-IAAIALSIVVYIAVQMVNAE-TMTAGNLITYVTAMGLIFEPIRRITNINATVQRGMAAAKSIFAILDTPSEANN--GKIELSNVNGQIDFNNVSFSYLGTEKTALNNFSLSIPARKTTALVGQSGSGKTTLANLITRFYQVNHGTITIDGIALDEIELNNLRANIAFVSQNVVLFNDTIAANIAYGHEEYDEQAIMNAAKAAHAWEFIEKLPEGLNTIIGDNGTLLSGGQRQRLAIARAFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALNSIY 568          
BLAST of abc transporter vs. nr
Match: gi|662121842|ref|WP_030073728.1| (ABC transporter ATP-binding protein [Halomonas alkaliantarctica])

HSP 1 Score: 813.913 bits (2101), Expect = 0.000e+0
Identity = 413/578 (71.45%), Postives = 467/578 (80.80%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYARGYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+V+AVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE T    +   G V F  V F Y A   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS   I  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LLAA GHY +QW VQTG A
Sbjct:   24 LRYARGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVVAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSETREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLTAPVKGEVRFEAVSFHYAASQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAEIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGQVAERGNHASLLAADGHYAAQWRVQTGAA 601          
BLAST of abc transporter vs. nr
Match: gi|1132207167|ref|WP_075881523.1| (ABC transporter ATP-binding protein [Halomonas sp. Marseille-P2426])

HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0
Identity = 405/576 (70.31%), Postives = 465/576 (80.73%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            +RYA+GYRR++I A+  SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET  +QI  LAVLTFFIWAGESLF+Y + VLWRNLAQ LQA+MR +AYEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+V+AVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY DVRE+VG LSSRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL+  I +++      A+   G V+F  V F Y +   G++  ++ VP G TLALVGATGSGKSTL+KLLLRFY  ++G + +DG  IN + L  LR AIG VSQ+ +LFEGSIRDNIAYG P A   AI  AA+ AEAW FI+ LPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTV+MIAHRLST+VHA+ IVV+  G++ E+G HD LL A GHY +QW VQTG
Sbjct:   16 LRYAKGYRRQIITATLCSIINKLFDIAPEILIGVAIDVVVNQEQSFVACLGFETPQEQISILAVLTFFIWAGESLFEYLFQVLWRNLAQRLQANMRQDAYEHAQRLDMAFFEAKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVLAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYNDVREKVGDLSSRLSNNLSGIATIKSFTSEAREAERLRDASEAYVEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGNLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLEEPIKVKETSDQPLATPVRGEVTFDAVSFHYASSEVGVDGINLHVPAGNTLALVGATGSGKSTLVKLLLRFYDPESGRVLIDGQPINAVSLQSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDADDAAIIDAAKTAEAWSFIDTLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVLMIAHRLSTIVHADEIVVIEKGQVTERGTHDDLLDANGHYAAQWRVQTG 591          
BLAST of abc transporter vs. nr
Match: gi|1140871713|ref|WP_076725360.1| (ABC transporter ATP-binding protein [Marinobacter lutaoensis] >gi|1139442300|gb|ONF42893.1| ABC transporter [Marinobacter lutaoensis])

HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0
Identity = 402/578 (69.55%), Postives = 465/578 (80.45%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYARGYRR++I A+  SIINKLFDIAPEILIGIAIDVVVN++ SFVA  GFETA QQI  LAVLTF +WAGESLF+Y + +LWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPL+ALLAF+PIP+IIWGAFYF R+A PLYADVRE+VG L+SRL NN+ GIATIKSFT+E  EA RLR+ S AY DANR+AI +SSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT+LA+ ID FERAMASTRRIL LL   + + D+G    A    G V F  V FRY   G GI+D S+ VP G TLALVGATGSGKSTLIKLLLRFY   +G I++DG  I +L LS LR AIG VSQ+ +LF+G+IR+N+AYG P A+ E I  AA+ AEAW FIE LP+GL T VGERG  LSGGQRQRL+LARALLK+P +LVLDEATSAVDNETEAAIQRSLRR+   RTVIMIAHRLST+V A+ I V+ +G++VEQG H  LLA +G Y +QW VQTG A
Sbjct:   19 LRYARGYRRQIIAATTCSIINKLFDIAPEILIGIAIDVVVNKEASFVAGLGFETAQQQITILAVLTFVVWAGESLFEYLFQILWRNLAQRLQSDLRQDAYEHAQRLDMSFFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVLVTVVAVGAVFFILSPLVALLAFTPIPLIIWGAFYFQRKAGPLYADVREKVGDLASRLANNLAGIATIKSFTAEQREAARLRESSEAYVDANRKAIRISSAFIPVIRMAILAGFLATFTVGGMMALNGTLNVGAYGVLVFLTQRLLWPLTALAEVIDQFERAMASTRRILNLLAEPVRVHDQGGKALAQPVRGEVEFRHVTFRYPGSGGGIQDISLSVPAGHTLALVGATGSGKSTLIKLLLRFYDPVSGEIRIDGQPIRELSLSSLRQAIGLVSQDVYLFDGTIRENLAYGKPDATDEEIIEAARTAEAWSFIETLPEGLDTPVGERGARLSGGQRQRLSLARALLKNPPILVLDEATSAVDNETEAAIQRSLRRIGHNRTVIMIAHRLSTIVDADTIAVIEHGQVVEQGTHAELLARQGAYSAQWRVQTGQA 596          
BLAST of abc transporter vs. nr
Match: gi|1221548416|ref|WP_089684764.1| (ABC transporter ATP-binding protein [Halomonas gudaonensis] >gi|1086606275|emb|SDJ47180.1| ATP-binding cassette, subfamily B [Halomonas gudaonensis])

HSP 1 Score: 810.831 bits (2093), Expect = 0.000e+0
Identity = 414/576 (71.88%), Postives = 474/576 (82.29%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            +RYARGYRRR++ ASA SI+NKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFETA QQIL LAVLTFFIWAGESLF+Y Y VLWRNLAQ LQAD+R ++YEH QR  M +FE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF +SPLIALLAF+PIP+IIWGAF+F R+A PLYADVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR+ S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   L G+L VGAYGVLVFLTQRLLWPLT LA+ IDLFERAMASTRRIL LL   I +RD   A+      G VSF +V FRY + G G+E  S+ VP G TLALVGATGSGKSTL+KLLLRFY   +G I +DG  I+ + L+ LRGAIG VSQ+ +LFEGS+RDNIAYG P+AS   +  AA+ AEAWEFI+ LPQGL TAVGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL R+  GRTVIMIAHRLST+VHA+ IVV+  G++ E G HD+LLAA G Y +QW VQTG
Sbjct:   15 LRYARGYRRRIVAASACSIVNKLFDIAPEILIGVAIDVVVNQERSFVARVGFETAQQQILVLAVLTFFIWAGESLFEYLYQVLWRNLAQRLQADLRQDSYEHAQRLDMAYFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVGVTVVAVGAVFFVISPLIALLAFTPIPLIIWGAFFFQRKAGPLYADVREKVGDLASRLGNNLAGIATIKSFTSEAREAERLREVSEAYVEANRRAIQVSSAFIPVIRMAILAGFLATFTVGGMLALRGDLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLAVPITVRDNHGASLPEPVRGEVSFERVSFRYGSSGEGVEGVSLHVPAGNTLALVGATGSGKSTLVKLLLRFYDPDSGRICIDGQPIDGVSLASLRGAIGLVSQDVYLFEGSVRDNIAYGRPQASEAEVIEAARTAEAWEFIQALPQGLDTAVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLARIGHGRTVIMIAHRLSTIVHADEIVVIEGGRVAEHGTHDSLLAADGRYAAQWRVQTG 590          
BLAST of abc transporter vs. nr
Match: gi|1054550147|ref|WP_066319603.1| (ABC transporter ATP-binding protein [Halomonas sp. G11] >gi|1036588399|gb|OAZ97051.1| ABC transporter [Halomonas sp. G11])

HSP 1 Score: 810.831 bits (2093), Expect = 0.000e+0
Identity = 408/578 (70.59%), Postives = 468/578 (80.97%), Query Frame = 0
Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+I A+  SI+NKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET  +QI  LAVLTFFIWAGESLF+Y + VLWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+V+AVGAVFF LSPLIALLAF+PIP+IIWGAFYF R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY DANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG+L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++D+ T   A    G V F  V F Y++   G++   +  P G TLALVGATGSGKSTL+KLLLRFY  ++G + +DG  + D+ +  LR AIG VSQ+ +LFEGSIRDNIAYG P A  EAI  AA+ AEAW FIE LPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+G H +LLAA GHY +QW VQTG A
Sbjct:   27 LRYAKGYRRRIIAATVCSIVNKLFDIAPEILIGVAIDVVVNQEQSFVARLGFETPQEQITILAVLTFFIWAGESLFEYLFQVLWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVVAVGAVFFVLSPLIALLAFTPIPLIIWGAFYFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRAASEAYVDANRRAIQVSSAFIPVIRMAILAGFLATFTVGGMMALNGDLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEEPITVKDDSTTPLAQPVQGEVRFESVCFHYKSSDVGVDGIDLHAPAGHTLALVGATGSGKSTLVKLLLRFYDPESGRVLIDGQPVMDVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDADEEAIIDAAKTAEAWSFIETLPQGLDTPVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGTHKSLLAANGHYAAQWRVQTGEA 604          
The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 22
Match NameE-valueIdentityDescription
EMLSAG000000076601.682e-7431.18supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g... [more]
EMLSAG000000031044.945e-6237.36supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-... [more]
EMLSAG000000100482.539e-5645.15supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1... [more]
EMLSAG000000022211.288e-4629.14supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ... [more]
EMLSAG000000044905.368e-4629.03supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1... [more]
EMLSAG000000036112.919e-4330.30supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ... [more]
EMLSAG000000020162.778e-4036.19supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1... [more]
EMLSAG000000117007.454e-3925.34supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ... [more]
EMLSAG000000082482.008e-3828.69supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1... [more]
EMLSAG000000016552.348e-3727.50supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487... [more]

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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|46396427|sp|Q8DAV2.1|MSBA_VIBVU3.773e-8533.21RecName: Full=Lipid A export ATP-binding/permease ... [more]
gi|122064522|sp|Q0HHH4.1|MSBA_SHESM6.388e-8534.35RecName: Full=Lipid A export ATP-binding/permease ... [more]
gi|81916845|sp|Q9CXJ4.1|ABCB8_MOUSE8.430e-8533.63RecName: Full=ATP-binding cassette sub-family B me... [more]
gi|81821624|sp|Q5QU36.1|MSBA_IDILO7.074e-8435.12RecName: Full=Lipid A export ATP-binding/permease ... [more]
gi|122064529|sp|Q31FG2.1|MSBA_THICR9.777e-8434.30RecName: Full=Lipid A export ATP-binding/permease ... [more]

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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|662121842|ref|WP_030073728.1|0.000e+071.45ABC transporter ATP-binding protein [Halomonas alk... [more]
gi|1132207167|ref|WP_075881523.1|0.000e+070.31ABC transporter ATP-binding protein [Halomonas sp.... [more]
gi|1140871713|ref|WP_076725360.1|0.000e+069.55ABC transporter ATP-binding protein [Marinobacter ... [more]
gi|1221548416|ref|WP_089684764.1|0.000e+071.88ABC transporter ATP-binding protein [Halomonas gud... [more]
gi|1054550147|ref|WP_066319603.1|0.000e+070.59ABC transporter ATP-binding protein [Halomonas sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2803_size12270supercontigscaffold2803_size12270:6100..7836 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:transmembrane transport
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold2803_size12270:6100..7836-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2803_size12270-processed-gene-0.3 ID=snap_masked-scaffold2803_size12270-processed-gene-0.3|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2803_size12270:6100..7836- (Tigriopus kingsejongensis)
ATGCGCTATGCGCGTGGTTATCGGCGGCGCGTGATATTGGCGTCAGCCTC TTCCATTATCAACAAGCTGTTTGATATTGCGCCAGAAATCTTGATCGGTA TCGCCATTGATGTGGTGGTCAATCAGGACACCAGCTTTGTCGCAAGCTTT GGTTTTGAAACCGCACATCAGCAAATCCTGGCGCTGGCGGTTTTGACTTT TTTTATCTGGGCCGGTGAGTCCTTGTTTCAGTACTTTTATTTGGTGCTGT GGCGCAACTTGGCGCAAGACTTACAGGCGGATATGCGGCTCAACGCCTAC GAGCACATGCAGCGCCAATCGATGGGCTTCTTTGAAGAGCGCAGCACGGG TGATTTAGTTGCGGTGCTAAATGACGACGTCAATCAGCTCGAGCGTTTCC TCGACGGTGGCGCCAACGATTTAATCCAAGTTTTTGTCTCGGTGATCGCC GTCGGCGCGGTGTTCTTTTATCTCTCGCCGCTAATTGCGCTGCTGGCTTT TAGTCCGATACCGGTGATTATCTGGGGTGCGTTTTACTTTTTGCGTCGTG CCAGTCCGCTGTATGCCGATGTGCGCGAGCGTGTGGGTTTGCTCAGTAGT CGTCTGCAAAACAACATCGGTGGCATTGCGACTATTAAAAGCTTTACCTC CGAAGGTATCGAGGCTGAACGCCTGCGCCAAGAAAGTGCCGCTTATGCGG ACGCCAATCGCCGCGCTATCGCGGTCAGCTCGGCTTTTATTCCGGTGATT CGCATGGCGGTGTTGGCGGGCTTTTTGTGCACCTTTGTGCTCGGTGGCTT CAAGACACTAAACGGCGAGCTAGGTGTCGGTGCCTACGGTGTGTTGGTGT TTTTGACTCAGCGCTTGCTCTGGCCGCTGACAAGCTTGGCGCAGACCATT GATTTGTTTGAACGAGCAATGGCCAGTACGCGGCGAATATTGGGATTGCT CGATACAACGATAGATATCCGCGACGAAGGTACGGCCACGCGTGCCAGCG ATGCCAATGGCACCGTGAGCTTTGCGCAAGTTGGCTTTCGCTACAGAGCG GGCGGGGCCGGCATTGAGGATTTCAGTGTTGAAGTGCCGGGCGGTACAAC CTTGGCACTGGTCGGTGCCACCGGCTCTGGTAAATCCACCTTGATCAAGC TGCTGCTGCGTTTTTACTCGGCGCAGGCGGGCAGTATTAAACTCGATGGG GTTGATATCAATGATTTGCCCCTGAGCGAGCTGCGCGGTGCGATAGGTTT TGTCAGCCAAGAGCCCTTTTTATTCGAAGGCAGTATTCGCGACAATATCG CCTACGGTGACCCCAAGGCTAGTCTTGAGGCCATCACCTTGGCTGCGCAA CAGGCAGAAGCTTGGGAGTTTATTGAGCGTTTGCCGCAGGGCTTGCATAC GGCTGTCGGGGAGCGGGGCATATTGCTCTCAGGCGGGCAGCGACAACGCC TTGCGCTAGCGCGCGCCCTGCTTAAAGATCCACAAGTGCTGGTATTGGAC GAGGCCACCAGCGCAGTCGACAACGAAACCGAAGCCGCAATTCAGCGCTC CTTGCGCAGGCTTGCCAAAGGCCGCACCGTCATTATGATCGCGCATCGGC TATCAACGGTTGTACACGCGGAGCGCATTGTCGTGGTCGCCAACGGGAAA ATAGTCGAACAAGGCAACCATGACACTTTGCTAGCGGCCAAGGGTCATTA CCATTCCCAGTGGATGGTGCAAACCGGCGGCGCTTAG
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Synonyms
The feature 'abc transporter' has the following synonyms
Synonym
Tk03486
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