abc transporter, snap_masked-scaffold2803_size12270-processed-gene-0.3 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	snap_masked-scaffold2803_size12270-processed-gene-0.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10")

HSP 1 Score: 125.946 bits (315), Expect = 2.846e-30
Identity = 77/194 (39.69%), Postives = 114/194 (58.76%), Query Frame = 0

Query:  385 LLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +L+  +   G I +DGV+I  L L ++R  I  + Q+P LF+G+IR N+   D    L AI  A +QA+    +  L  GL T V E G   S GQRQ   LARA+L+  +VL++DEAT+ VD  T++ IQ ++R   K  TV  IAHRL TV+ ++RI+V+++G+I E G    LL+   +   Q + Q G +
Sbjct: 1390 VLKGLTEPEGKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGEL-AIWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLSDPSNIFYQMVNQLGPS 1582

HSP 2 Score: 113.235 bits (282), Expect = 3.493e-26
Identity = 70/213 (32.86%), Postives = 114/213 (53.52%), Query Frame = 0

Query:  358 FSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP---KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVV-ANGKIVEQGNHDTLLAAKG 565
            FSVE+  G   A++G  G GKST+I+ LL  +    G I +             +G I + SQE ++F GS+R NI  G P   K   E I + A + +  E+    P G +T VGE+GI LSGGQ+ R+ LAR +     + +LD+  SAVD    +      +++    +TVI++ H+L  + +A  I+++ ++G+I   G ++ L++  G
Sbjct:  739 FSVEI--GELCAIIGPVGCGKSTIIQSLLGEFPVSYGEINI-------------KGRISYASQEAWIFSGSVRQNILMGKPLIDKRYREVIRVCALEHDVREW----PDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSG 932

HSP 3 Score: 107.842 bits (268), Expect = 1.429e-24
Identity = 67/194 (34.54%), Postives = 106/194 (54.64%), Query Frame = 0

Query:  336 NGTVSFAQVGFRYRAGGAGI-EDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITL--AAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRT 526
             G V F+ V  RY      + +  + +      + ++G TG+GKS++I  L R    + G I +DG+DI  + L ++R  I  + Q+P LF GSIR N+   DP      + +  A +QA+ ++ +  L  GL + V E G   S GQRQ   LA A+L+  +VL++DEAT+ VD  T++ IQ ++R+  K  T
Sbjct:   47 KGVVEFSNVSMRYSQHQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISALFRLAEPE-GEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNL---DPFNEFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAIRKEFKDCT 236

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000741 (supercontig:LSalAtl2s:LSalAtl2s111:116041:261433:1 gene:EMLSAG00000000741 transcript:EMLSAT00000000741 description:"maker-LSalAtl2s111-snap-gene-2.14")

HSP 1 Score: 112.849 bits (281), Expect = 4.677e-26
Identity = 128/506 (25.30%), Postives = 213/506 (42.09%), Query Frame = 0

Query:  100 YEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIA--------------LLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAE---RLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGG--FKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLL------DTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAG--IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYG---DPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-----EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVV-ANGKIVEQGNHDTLLAAKGHYHS 569
            Y+   + S     + S G +V +L++DVN+          DL  +F+  + V  + F L  +I               LL F P+   I   F  LR       D R RV      +   I G+  IK +  E    E     R++            A +  F       VL       ++G     + N  L  G +   V L+  L +P      TI +   A+ ST RI   L      D    ++ E       + +  +    V  ++ +      + + S +V      A++G  GSGKST+++ LL  +   +G I              + G I + SQEP++F G+IR NI  G   + K  L+ + + + + +    +E  P   HT VGE+G+ LSGGQ+ R+ LAR++  +  V +LD+  SAVD+       E  I+  L R    +TVI++ H++  +  A  I+++   G+I +QG  + LL ++  + S
Sbjct:  181 YKKSLKLSKASIGKSSVGQMVNLLSNDVNRY---------DLCVLFIHYLWVAPLQFILVSIITWYMVGISSMCGGAILLVFIPLQTWIGKQFSRLRILIAGKTDKRIRV------MNEIIEGMKVIKMYAWEYPFMEVVNETRRDEIQTIKKTYEYKAFNLGFFFTSSRVVLLLIFFLMIIGNEVISSKNIFLIFGLFNT-VRLSLTLFFP-----NTISMTSEALVSTDRIQNFLLLEEIGDICSSMKHEPEVR--PEVSLRIEMKNVSGKWTSNEKDDDLRNVSFQVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDI-------------SIYGKISYASQEPWIFSGTIRQNILLGASMNHKRYLKVLKVCSLEHD----LESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEADVYLLDDPLSAVDSHVGRHLYEECIKNYLSR----KTVILVTHQIQYLGDASNIILLNTKGEIEDQGTLNKLLMSERDFTS 642

HSP 2 Score: 106.301 bits (264), Expect = 4.562e-24
Identity = 79/284 (27.82%), Postives = 131/284 (46.13%), Query Frame = 0

Query:  296 LAQTIDLFERAMASTRRILGLL------DTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP---KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNET-----EAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVV-ANGKIVEQGNHDTLLAAK 564
               TI +   A+ ST RI   L      D    ++ E            +      +        + + S +V      A++G  GSGKST+++ LL  +   +G I              + G I + SQEP++F G+IR NI  G P   K  L+ + + +   +    +E  P   HT VGE+G+ LSGGQ+ R+ LAR++  +  V +LD+  SAVD+       E  I++ L R    +TVI++ H++  +  A  I+++   G+   QG  + LL ++
Sbjct: 1154 FPNTISMTSEALVSTDRIQNFLLLEEIGDICSSMKHEPEVRPEESLRIEMKNVSGKWTSNEKDDDLRNVSFQVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDI-------------SIYGKISYASQEPWIFSGTIRQNILLGAPMNHKRYLKVLKVCSLDHD----LESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEGDVYLLDDPLSAVDSHVGRYLYEECIKKYLSR----KTVILVTHQIQYLREANNIILLNTKGETEAQGTLNKLLMSE 1416

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000090 (supercontig:LSalAtl2s:LSalAtl2s1014:9799:23913:-1 gene:EMLSAG00000000090 transcript:EMLSAT00000000090 description:"maker-LSalAtl2s1014-snap-gene-0.6")

HSP 1 Score: 95.1301 bits (235), Expect = 1.385e-20
Identity = 142/611 (23.24%), Postives = 263/611 (43.04%), Query Frame = 0

Query:   12 ILASASSIINKLFDIAPEILIGIAIDVVVNQ--DTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMG----FFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVII-------WGAFYFLRRASPL-YADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRA--IAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQ--------RLLWPLTSLAQTIDLF-------ERAMASTRRIL------------GLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRA-GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            I+A    +I++ FD+  ++ +    ++      DT++   +  +T +  I+   +L    W  +SL  YF  VL  N ++ L+A      ++ + R+  G    FF     G ++   + D+++ + FL     +     V ++    +     P+ A     P+ +I          A  FL+R S    A V +  G       + + G  TI+ +   G+E++ +  E  +  D ++    + + S     +R+ ++AG   TF+           G+ A  ++ F ++          L    ++ Q I LF       E+AM S  RI             GLL + I   +     +   +   + F     +Y +   A I++F++ V  G  + +VG TGSGKS+LI  L      + G I +DGVD++      +R        +  LF+GSIR N+   D + + E I     +A+  EF  +LP GL  ++ E G  +S             L    ++++DEA SA+  E+E  I  +        T+ +IAHR+  ++  ++I+V+ NG I E GN ++L+ ++       + +T G+
Sbjct:  322 IIALVGYLISQCFDVCSKLWLSRWTNLSSTNINDTNYRHIYNEDTRNMYIVVYGILG---WC-QSL-AYFLSVLLIN-SRSLKASSHF--HDVILRKVFGAPLNFFWSTPKGTIINRFSKDMDEADMFLPNTLKNFAYQAVKILGTLIIALIAFPITAFFIVCPLGLIFIEVVKSYLMASRFLKRTSATKLAMVLKHFG------DSAVHGGTTIRCY---GVESDYI-DEHMSLIDEHQSVSLMEIISEAXLFLRLQLIAG---TFI-----------GILATALVFFPSEGNSSSLSALSLTSSLTVLQDIFLFTRYAAFIEKAMVSIERIKECEDLIPQDPSSGLLPSII--TNGSKRPKNHQSRYYIQFEDFSGKYSSLKNASIKNFTLNVRLGEKVGVVGRTGSGKSSLILALSGLLEVEKGKIFIDGVDMSSGTARNIRKK---DITDAALFKGSIRYNLD-PDDRFTDEYIWSVLDEAQMKEFFVQLPGGLDFSLKENGSNIS-------------LAGSNLIIMDEAXSAMTLESEERILNTYFSRFSSSTIFVIAHRIQPLLACDKILVLENGTIAEFGNPESLIKSQKSIFKSMLRRTNGS 881

HSP 2 Score: 80.4925 bits (197), Expect = 5.331e-16
Identity = 60/201 (29.85%), Postives = 103/201 (51.24%), Query Frame = 0

Query:  357 DFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSL---RRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQ 554
            +FS  V  G   A+VG  GSGKS L+       +A  G +   G        S +   + +V+Q  +L   +IRDNI +G P  S +   + +      +F + + +G  T +   G  LSGGQRQR+  ARA+ ++ QV ++D+  SA D+  +A I  +    +   + +T ++I ++ S +   +RI+V+ NG + E+
Sbjct:   73 NFSTRV--GELTAVVGKVGSGKSCLL-------AALCGELNQRGKGS-----SLINKDLVYVTQNIWLKSATIRDNITFGQPYNSSQYQKVVSLCQLGQDF-KDMYRGDLTYLASNGSTLSGGQRQRIGFARAIYQNAQVYLMDDPLSACDSNLKAQIFHNTIGPKGFLQKKTRLLITNQSSLIPLMDRIIVIQNGTVEEK 258

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35")

HSP 1 Score: 76.6406 bits (187), Expect = 6.973e-15
Identity = 54/210 (25.71%), Postives = 105/210 (50.00%), Query Frame = 0

Query:  355 IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAIT-LAAQQAEAW-----------EFIERLPQGLHTAVGER-GILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLS-TVVHAERIVVVANGK 550
            + + ++E+  G  L + G++  GK++L+++L   ++ ++GS K              R  + F+SQ+PF   GS+R  + Y      LE ++ ++  Q + W           + I+R+   L     +    +LS G+ QR+A+ R+L   P++L+LDEATSA+  + E    R +       T+I + HR S    H++ + +++ G+
Sbjct:  400 VSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGSYKFG------------RKTVIFISQKPFFTNGSLRRQVTY-----PLEVVSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREV-SYNNLITLISVGHRDSLKKFHSKHLQILSEGQ 591

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1")

HSP 1 Score: 75.0998 bits (183), Expect = 1.909e-14
Identity = 57/217 (26.27%), Postives = 108/217 (49.77%), Query Frame = 0

Query:  355 IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLF-EGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGIL--LSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLA--KGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGH 566
            + + ++ +  G+   L+GA+G GK+T++  ++       G + + G    D  +      IG++ QE  L+ E ++R+ + Y      +E      Q  +  +FI +  Q       +R ++  LSGGQ++R++ A ALL DP++ +LDE T  VD     +I   L  LA  + +T+++  H +     A  I ++ NGK++ + + + LL   G 
Sbjct:   46 LNNLNLTITEGSIYGLLGASGCGKTTVLSCIVGRKKLNKGQVTVFGGSPGDKGIGIPGNRIGYMPQEIALYKEFTVRETLKYFGRLYEMET----DQIDQRIDFILKFLQ----ITRDRDMVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKKTILITTHYIEEARQATSIGLMRNGKLLAESSPEKLLQIYGE 254

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5")

HSP 1 Score: 73.1738 bits (178), Expect = 8.751e-14
Identity = 59/208 (28.37%), Postives = 103/208 (49.52%), Query Frame = 0

Query:  359 SVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLF-EGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRL----AKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            ++ VP G    L+G +G GK+TL++++       +G  K+ G D   + L      IG++ Q+  L+ E +I + + +      ++   + ++     E +E LP       G     +SGGQR+R++LA ALL +P++LVLDE T  VD      I   L  +    +K RT+I+  H +     A  + ++  GKI+++     LL
Sbjct:   46 NMSVPKGVIYGLLGPSGCGKTTLLRVITGREKLNSGEFKIFGEDPGTVGLEVPGRRIGYMPQDLALYMELTILETLFFYGRLNKMQTSKIRSRAETLIEILE-LPHS-----GRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHLLTIVNNSSKKRTIIITTHYVEEARQAHIVGMLRYGKILDEDAPTKLL 247

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0")

HSP 1 Score: 69.707 bits (169), Expect = 9.439e-13
Identity = 60/282 (21.28%), Postives = 114/282 (40.43%), Query Frame = 0

Query:  284 FLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLD-------TTIDIRDEGTATRASDAN---GTVSFAQVGFRYRAGGAG---IEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQ-GLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLST-VVHAERIVVVANGK 550
            F+   L++ L+ L      F      T R++ L++            +D    T   D +     ++   +  +  +       I++ ++ +  G  + + GA+ SGK++L++L+   +    GSI            S    +I F+SQ P + +GS+  N+ Y         +T    Q   +       Q  L         +LS G+ QR+   R     PQV++LDE+T+++    EA +   L       T++ + HR S    H + + +  NG+
Sbjct:  314 FVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILEKHNSNPCFFKDNAICTNDKDPHMFETMINLENIILKIPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSI------------SFFTDSIEFLSQRPLMTDGSLLQNMIYPSEXPISPDLTWFKDQLTRFNLDHLYKQYDLFQYQNRWEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEYLIITCPKITILSVGHRDSLRKYHMKELQLQCNGE 583

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6")

HSP 1 Score: 55.4546 bits (132), Expect = 1.227e-8
Identity = 60/220 (27.27%), Postives = 107/220 (48.64%), Query Frame = 0

Query:  357 DFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDG--VDINDLPLSELRGAIGFVSQEPFLF-EGSIRDNIA-YGD----PKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGIL---LSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLA----KGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLL 561
            + S+ +  G    L+G +GSGK+TL++ ++   S  +GSI + G      DL +   R  +G++ Q+  ++ E +I + +  YG     PKA ++      ++A+    +  LP+        + IL   LSGG ++R +LA ALL +P +L+LDE T  VD      I   L  +     +  T+++  H +     A  + ++  G+I+ Q     LL
Sbjct:   48 NLSIRITKGHIYGLLGPSGSGKTTLLQCVIGKQSLDSGSILVFGEYPGTKDLGVPGKR--VGYMPQDLAMYMELTIMETLEFYGRIFNMPKAKIK------KRAKFLVELLELPK--------KKILIQKLSGGHQRRASLAVALLHEPDLLILDEPTVGVDPVLRRNIWGHLVDICNNPIRKTTIVVTTHYVDEARQANMVGMMRFGRILAQNCPSRLL 251

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000012458 (supercontig:LSalAtl2s:LSalAtl2s917:121539:129683:-1 gene:EMLSAG00000012458 transcript:EMLSAT00000012458 description:"maker-LSalAtl2s917-augustus-gene-1.21")

HSP 1 Score: 55.8398 bits (133), Expect = 2.073e-8
Identity = 62/207 (29.95%), Postives = 95/207 (45.89%), Query Frame = 0

Query:  351 GGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLL-LRFYSAQAGSIKLDGVDI----NDLPLSELRGAIGFV---SQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILL-----------------SGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAH 532
            G   + D  +E+  G    L+G  GSGKS+L+ +L  R    Q      D +DI     ++P SE + AI  V    QE    E  + + +A+ D +   E +       E +E +E +  G  TA  +   LL                 SGG R R+ALARAL   P +L+LDE T+ +D E    ++  LR+    R +++I+H
Sbjct:  103 GAELLTDTKLELSCGQRYGLIGDNGSGKSSLLAVLGNREVPLQ------DHIDIYYLSREMPASE-KSAIQAVMEADQERIKLE-HLAEKLAHLDDEEVHEYLM------EVYERLEEI--GSDTAEAKASALLKGLGFDKEMQAKACKDYSGGWRMRIALARALFIKPHLLLLDEPTNHLDLEACVWLEEELRKY--NRILVLISH 291

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004492 (supercontig:LSalAtl2s:LSalAtl2s2344:67375:70448:-1 gene:EMLSAG00000004492 transcript:EMLSAT00000004492 description:"snap-LSalAtl2s2344-processed-gene-0.9")

HSP 1 Score: 50.447 bits (119), Expect = 2.112e-8
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0

Query:  523 KGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            KGRTV+ IAHRLST+ +A+RI VV  GK++E G++  L+     Y
Sbjct:    2 KGRTVVTIAHRLSTIQNADRIAVVHEGKVMEIGSYSELMNISNGY 46

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BLAST of abc transporter vs. SwissProt
Match: gi|46396427|sp|Q8DAV2.1|MSBA_VIBVU (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 279.256 bits (713), Expect = 3.773e-85
Identity = 175/527 (33.21%), Postives = 278/527 (52.75%), Query Frame = 0

Query:   53 ETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYR-AGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY--GDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            E+   + L L V       G S F   Y + W  ++ ++   +R   + H  +  + +F++  +G L++ +  D  Q+          +++   S+I +  + FY S  ++L+     PV+ W   +  +R   +  +++  +G+++S  +  + G   + S+  + +E  R    S      + + I   +A  P+I+M      +    L    T+  +L  G + V+      L+ PL +L      F+R MA+ + +  L+D   + ++ GT +    A G V+   + F Y  A    +   S ++P G T+ALVG +GSGKST+  L  RFY   +G I+LDGVD+ D  L  LR     VSQ   LF  +I +NIAY  GD K S E I  AA+ A A EFI ++  GL T VGE G  LSGGQRQR+A+ARALL+D  VL+LDEATSA+D E+E AIQ +L  L K +TV++IAHRLST+  A++I+V+ +G +VE+G+H  L+   G Y     +Q G
Sbjct:   60 ESDFLRTLPLLVFGLMFIRGISSFVSTYCLSW--VSGNVVMQVRRMVFNHYMQMPVSYFDKEKSGSLLSRITYDSEQVSAATSQALVSIVREGTSIIGLLVLMFYNSWQLSLVLILVAPVVAWAIGFVSKRFRKISKNMQTTMGIVTSSAEQMLKGHKVVLSYGGQEVEKSRFDVVSNQMRQQSMKLITAQAAANPIIQMIASIAIVVVLYLASVDTIKDQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAAAQTLFALVDLEPE-KNTGTYS-VERAKGEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGD-KYSREDIERAAELAHAMEFISKMENGLDTMVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGSHSELIEKDGAYAQLHRIQFG 581

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BLAST of abc transporter vs. SwissProt
Match: gi|122064522|sp|Q0HHH4.1|MSBA_SHESM (RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|122064523|sp|Q0HTS8.1|MSBA_SHESR RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 279.256 bits (713), Expect = 6.388e-85
Identity = 203/591 (34.35%), Postives = 308/591 (52.12%), Query Frame = 0

Query:    3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVA-------SFGFETAHQQIL--ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRR---AIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGA-GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSA-QAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP-KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            Y +  +   +L+    I+  L D A    IG  ID   +  T  ++       S GF   +Q +L   + V+  F   G + F   Y + +  ++  L  DMR   +EH     + + ++ +TG+L++ +  D  Q+ R        +++  V+VI +  + FY S  ++L      P++        RR   +   ++  +G +S+  +  I G   + +F  +  E  R     A   D NR     +AV+ A    + M V+  F   FVL      ++  +L  G +  ++     +L P+ +L +    F+R +A+   +  LLDT  +  D GT T    A G + F  V F Y       ++    EV  G TLALVG +GSGKST+  L+ RFY+  ++G IKLD V I D  L  LR  +  VSQ+  LF  +I +NIAY  P +A+ E I  AA  A A EFIE+LP+GL T VGE G+LLSGGQRQR+A+ARA+L+D  VL+LDEATSA+D E+E AIQ+ L  L + RT ++IAHRLST+  A++I+VV  G+IVE+G H +LL   G Y   + +Q G
Sbjct:   19 YLKPMKGMFLLSVCGLIVYGLVDAAFISFIGPFIDKGFSSSTPAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISY--MSARLIMDMRQQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGGQETETARF----AKINDRNRHQNMKLAVAQAVSQPLIM-VIGSFALAFVLYAASLDSMKADLTAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPE-SDTGTYT-VKRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG 600

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BLAST of abc transporter vs. SwissProt
Match: gi|81916845|sp|Q9CXJ4.1|ABCB8_MOUSE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor)

HSP 1 Score: 281.952 bits (720), Expect = 8.430e-85
Identity = 191/568 (33.63%), Postives = 297/568 (52.29%), Query Frame = 0

Query:   11 VILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQE---SAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIR-DEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            ++LA  ++++N    +   +L+G  +++V       + SF  E+       L+V    ++  + L  + YLVL  ++ + +  DMR   +  + RQ + FF+ + TG LV+ L  DV + +      +  G     QV  S++++      LSP + L+     P ++            L    +E++   +      +G + T+++F  E  E ER + E       A+   R IA+   F  +  +A     L T  +GG      +L  G     +  +Q +   + SL+       R +++  R+   +  +  I    G      D  G+++F  V F Y  R G   ++DF++++P G  +ALVG +G GK+T+  LL RFY  +AGS+ LDG D+  L  S LRG  IGF+SQEP LF  +I +NI +G   AS E +  AA++A A EFI   P G  T VGERG  LSGGQ+QRLA+ARAL+K P VL+LDEATSA+D E+E  +Q +L R + GRTV++IAHRLSTV  A  I+V+ANG++ E G H+ LL   G Y
Sbjct:  134 IVLALGAALVN----VQIPLLLGQLVEIVAKYTRDHMGSFVSESRK-----LSVQLLLLYGVQGLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKLVISQGLRSCTQVIGSLVSLS----MLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIAL---FQGLSNIAFNCMVLGTLFIGGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMALSPVIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLY 685

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BLAST of abc transporter vs. SwissProt
Match: gi|81821624|sp|Q5QU36.1|MSBA_IDILO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 275.789 bits (704), Expect = 7.074e-84
Identity = 183/521 (35.12%), Postives = 274/521 (52.59%), Query Frame = 0

Query:   61 ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD-ANGTVSFAQVGFRYRAGG-AGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPK-ASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            AL V   FI  G       Y + W      +   MR   ++HM +  +GF ++ STGDL++ +  D  Q+          L++    V  +  + FY S  ++L+     P++        RR   + + ++  +G +++  +  I G   +     +  E+ R  + +    + N + +   +    VI+           V+  F  + GEL  GA+  L+     LL PL  L      F+R +A+   +  +LD  I++ D+G+  R  D A G + F  V F Y+      +E  + +V  G T+ALVG +GSGKST+  LL RFY  + GSI LDG +IND  L  LR     VSQ   LF  +I +NIAYG  K  S E I  AA+QA   EF + +P+GL T VGE G++LSGGQRQR+A+ARALL+D  +L+LDEATSA+D E+E  IQ +L  L K RT I+IAHRLST+ +A+ I+V+ NG+I+E+G H  LL  +G Y     +Q  G+
Sbjct:   66 ALFVPFIFILRGSLNVASSYFLHWVGFK--VVTKMRQQLFDHMMKLPVGFHDQHSTGDLISKITYDTQQVAEASSRAVLVLVKEGAFVAGLLGLMFYQSWQLSLVFLVIGPLVAKVVGVVSRRFRKVSSRIQTAMGNVTTTAEQMINGHKVVIMHQGQKGESTRFSEINNITRNQNMKLVNTRAISTSVIQFIASLSLSMVLVIASFPEMLGELSAGAFTTLLTAMIMLLRPLKQLTNVNSDFQRGIAAATSVFAILDEPIEV-DKGS--RVVDRAAGDIVFDDVTFSYQKDDEPALEHINFKVDQGKTVALVGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTIANNIAYGASKDVSRENIIKAAEQAYVTEFTDSMPKGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLLDQEGAYFQLHNLQFSGS 581

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BLAST of abc transporter vs. SwissProt
Match: gi|122064529|sp|Q31FG2.1|MSBA_THICR (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 275.404 bits (703), Expect = 9.777e-84
Identity = 177/516 (34.30%), Postives = 284/516 (55.04%), Query Frame = 0

Query:   59 ILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLY----ADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQR--LLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567
            +L L +   FI  G  + +YF  V+   +AQ    ++R   Y+ M         + STG L++ +  DV Q    L      + +  ++++A+ A   Y S  + L+     P++     +F+ RA  L      D+++ +G ++ RL+  + G   IK + SE  E +R +  + +      + I VS+  +P++++ + A  L   V    + +N E  + A  ++ ++T    +  P+  +       +R MA+ + I  +LDT  +  +       S+ NG + F  V F Y       + +FS+ +P   T ALVG +GSGK+TL  L+ RFY    G+I +DG+ ++++ L+ LR  I FVSQ   LF  +I  NIAYG  +   +AI  AA+ A AWEFIE+LP+GL+T +G+ G LLSGGQRQRLA+ARA LK+  +L++DEATSA+DN++E  IQ ++  L K RTVI+IAHRLST+ +A++IVV+  G + EQG H  L+A    Y
Sbjct:   63 LLPLQLAAVFIVKG--VAEYFSKVMSTWIAQKAIFNIRSELYDKMLCLPQAEHNQTSTGTLMSKVTYDVTQTGNALSEAWIVIARDSLTILALLATLIYYSWQLTLVMLIIGPIVA----FFIDRAGKLMRTSSTDMQDNMGEMTHRLEEGLKGYQDIKIYGSEKYELDRFKASAESLRQNTMKVIKVSALNVPLVQV-IAAIALSIVVYIAVQMVNAE-TMTAGNLITYVTAMGLIFEPIRRITNINATVQRGMAAAKSIFAILDTPSEANN--GKIELSNVNGQIDFNNVSFSYLGTEKTALNNFSLSIPARKTTALVGQSGSGKTTLANLITRFYQVNHGTITIDGIALDEIELNNLRANIAFVSQNVVLFNDTIAANIAYGHEEYDEQAIMNAAKAAHAWEFIEKLPEGLNTIIGDNGTLLSGGQRQRLAIARAFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALNSIY 568

[Close]

BLAST of abc transporter vs. nr
Match: gi|499713406|ref|WP_011394140.1| (ABC transporter ATP-binding protein [Hahella chejuensis] >gi|83631096|gb|ABC27063.1| ABC-type multidrug transport system, ATPase and permease components [Hahella chejuensis KCTC 2396])

HSP 1 Score: 860.522 bits (2222), Expect = 0.000e+0
Identity = 418/577 (72.44%), Postives = 488/577 (84.58%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577
            +RYARGYRRR+I A + SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF T  QQILAL VLTFFIWAGES+F+Y +L++WRNL Q LQAD+R +AY+H+QR  M FFE RS+G LV+++NDDVNQLERFLDGGAN+LIQVFV+V+AVG VF  +SP IALLAF+PIP+I+WGAF+FL+RA+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E  E+ERLR+ S AY  ANR+AIAVSSAFIPVIRMA+LAGFL TF +GG + L+GEL  GAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILG+++T ID+RDEG+ +      G V F  V F Y AG  G+E+ +++V  G+TLALVGATGSGKSTLIKLLLRFY  + GSI +DGV I  LPL ELRGAIG VSQ+ FLFEGSIR+NIAYG P AS E I  AA+ AEAWEFI RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+ +A GRTV+MIAHRLST+VHA+ IVVV +GK+VEQG+H  LL  KG Y SQW VQTGG
Sbjct:   35 LRYARGYRRRIIAAGSCSIINKLFDIAPEILIGIAIDVVVNKEQSFVAAMGFNTPQQQILALGVLTFFIWAGESIFEYLHLIMWRNLGQVLQADLRQDAYDHVQRLDMAFFESRSSGQLVSIINDDVNQLERFLDGGANNLIQVFVTVVAVGGVFLAISPFIALLAFTPIPIIVWGAFFFLKRANPLYADVREKVGGLASRLANNIGGIATIKSFTAEAQESERLREASDAYVQANRKAIAVSSAFIPVIRMAILAGFLATFTVGGLQALSGELNAGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGVIETPIDVRDEGSHSLPQPVRGEVDFQNVSFEYAAGAGGVENVNLQVKAGSTLALVGATGSGKSTLIKLLLRFYRPRQGSILVDGVPIEQLPLKELRGAIGLVSQDVFLFEGSIRENIAYGRPTASEEEIIAAARTAEAWEFIARLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKHIAHGRTVVMIAHRLSTIVHADNIVVVDHGKVVEQGDHRQLLERKGMYWSQWQVQTGG 611

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BLAST of abc transporter vs. nr
Match: gi|1234072129|ref|WP_094706695.1| (ABC transporter ATP-binding protein [Hahella sp. CCB-MM4] >gi|1233736063|gb|OZG74740.1| ABC transporter [Hahella sp. CCB-MM4])

HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0
Identity = 427/577 (74.00%), Postives = 491/577 (85.10%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577
            +RYARGYRRR+I AS  SIINKLFDIAPEILIGIAIDVVVNQ+ SFVA+ GF T  +QIL L +LTFFIWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+QR  M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVGAVFF LSP IALLAF+PIP+IIWGAFYFLR+A+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E +E++RLR+ S  Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF  L G+L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T  +   G VSF QV F Y AG  G+    + V  GTTLALVGATGSGKSTLIKLLLRFY  Q+G I LDG+ I  LPL  LRGAIG VSQ+ FLFEG+IRDNI+YG P A  +AI  AA+ AEAWEFI+RLPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+ +G+IVEQGNH+ LL  +G Y SQW VQTGG
Sbjct:   17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNQEESFVAAMGFSTPKEQILILGLLTFFIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQRLDMAFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGAVFFVLSPFIALLAFTPIPIIIWGAFYFLRKATPLYADVREKVGGLASRLANNIGGIATIKSFTAELMESQRLRESSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGDLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTRTPDAPIKGEVSFQQVDFEYAAGAGGVHRVDLNVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKTLRGAIGLVSQDVFLFEGTIRDNISYGHPGAGDDAIIDAARTAEAWEFIQRLPQGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEHGRIVEQGNHEQLLERRGAYWSQWQVQTGG 593

[Close]

BLAST of abc transporter vs. nr
Match: gi|521078328|ref|WP_020409235.1| (ABC transporter ATP-binding protein [Hahella ganghwensis])

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 421/577 (72.96%), Postives = 491/577 (85.10%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577
            +RYARGYRRR+I AS  SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF +A +QI+ L +LTF IWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+Q+  M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVG VFF LSP+IALLAF+PIP+IIWGAFYFLR+A+PLYADVR++VG L+SRL NNIGGIATIKSFT+E +E+ERLR  S  Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF  L G L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T  +   G VSF +V F Y AG  G++   +EV  GTTLALVGATGSGKSTLIKLLLRFY  Q+G I LDG+ I  LPL  LRGAIG VSQ+ FLFEG+IRDNIAYG P A  +AI  AA+ AEAWEFI+RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+  G++VEQGNH++LL  +G Y SQW VQTGG
Sbjct:   17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNKEESFVAALGFTSAKEQIIVLGILTFLIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQKLDMSFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGGVFFVLSPVIALLAFTPIPIIIWGAFYFLRKATPLYADVRDQVGGLASRLANNIGGIATIKSFTAEPMESERLRDSSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGSLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTQTPENPIKGEVSFRKVNFEYAAGAGGVQGIDLEVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKVLRGAIGLVSQDVFLFEGTIRDNIAYGKPGAEDDAIIDAAKTAEAWEFIQRLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEQGRVVEQGNHESLLERRGAYWSQWQVQTGG 593

[Close]

BLAST of abc transporter vs. nr
Match: gi|497407268|ref|WP_009721466.1| (ABC transporter ATP-binding protein [Halomonas sp. TD01] >gi|338766621|gb|EGP21538.1| ABC transporter, transmembrane region [Halomonas sp. TD01])

HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 414/578 (71.63%), Postives = 469/578 (81.14%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE TA  A+   G V F  V F Y +   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL A GHY +QW VQTG A
Sbjct:   30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTAPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEQGRVAERGNHSSLLVADGHYAAQWRVQTGAA 607

[Close]

BLAST of abc transporter vs. nr
Match: gi|740692214|ref|WP_038477503.1| (ABC transporter ATP-binding protein [Halomonas campaniensis] >gi|641740248|gb|AIA73526.1| ABC transporter [Halomonas campaniensis])

HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0
Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE T   A+   G V F  V F Y +   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL A GHY +QW VQTG A
Sbjct:   24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601

[Close]

BLAST of abc transporter vs. nr
Match: gi|1178484832|ref|WP_083006664.1| (ABC transporter ATP-binding protein [Halomonas sp. GT])

HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0
Identity = 412/578 (71.28%), Postives = 467/578 (80.80%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE T   A+   G V F  V F Y +   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL   GHY +QW VQTG A
Sbjct:   30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 607

[Close]

BLAST of abc transporter vs. nr
Match: gi|1240438563|ref|WP_095603966.1| (ABC transporter ATP-binding protein [Halomonas sp. WN018] >gi|1240183621|gb|PAU71501.1| ABC transporter [Halomonas sp. WN018])

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE T   A+   G V F  V F Y +   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL A GHY +QW VQTG A
Sbjct:   24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPIIEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601

[Close]

BLAST of abc transporter vs. nr
Match: gi|1215204375|ref|WP_089039591.1| (ABC transporter ATP-binding protein [Halomonas sp. N3-2A] >gi|1214955929|gb|ASK20384.1| ABC transporter [Halomonas sp. N3-2A])

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 413/578 (71.45%), Postives = 467/578 (80.80%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++DE T   A+   G V F  V F Y A   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I ++ +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL   GHY +QW VQTG A
Sbjct:   24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYAASQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGSA 601

[Close]

BLAST of abc transporter vs. nr
Match: gi|258618592|gb|ACV84075.1| (ABC-type multidrug transport system protein [Halomonas sp. HTNK1])

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 410/578 (70.93%), Postives = 464/578 (80.28%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578
            +RYA+GYRRR+  A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA  GFET HQQI  LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR  M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE  EAERLR  S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG   LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+  I ++D+      +   G V F  V F Y A   G+    + VP G TLALVGATGSGKSTLIKLLLRFY   +G + +DG  I  + +  LR AIG VSQ+ +LFEGSIRDNIAYG P AS  AI  AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+  G++ E+GNH +LL   GHY +QW VQTG A
Sbjct:   24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDQSAMPLTAPVKGEVRFEAVSFHYAASQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITQVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 601

[Close]

BLAST of abc transporter vs. nr
Match: gi|1221668980|ref|WP_089797355.1| (ABC transporter ATP-binding protein [Halomonas korlensis])

HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0
Identity = 410/576 (71.18%), Postives = 470/576 (81.60%), Query Frame = 0

Query:    1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576
            ++YARGYRRR+I ASA SIINKLFDIAPEILIG+AIDVVVNQ+TSFVA  GFE+A +QI+ L VLTFFIWAGES+F+Y + VLWRNLAQ LQ+D+R +AYEH QR  M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+I+WGAFYF R+A PLYADVRE+VG LSSRL NN+ GIATIKSFT+E  EAERLR+ S AY  ANRRAI +SSAFIPVIRMA+L+GFL TF +GG   L G+L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + + D G    A    G V FA+V FRY   G G+ D  + VP G TLALVGATGSGKSTLIKLLLRF+ AQ+G I++DG  I +L L+ LRGAIG VSQ+ +LFEG++RDNIAYG P AS E +  AAQ AEAW FI+ LP GL TAVGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL ++  GRTVIMIAHRLST+VHA+ I V+  G++VEQG H  LLA  G Y +QW VQTG
Sbjct:   29 LKYARGYRRRIIAASACSIINKLFDIAPEILIGVAIDVVVNQETSFVARLGFESAQEQIVMLGVLTFFIWAGESIFEYLFQVLWRNLAQRLQSDLRQDAYEHAQRLDMSFFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVVVTVLAVGAVFFVLSPLIALLAFTPIPLIVWGAFYFQRKAGPLYADVREKVGDLSSRLSNNLAGIATIKSFTAETREAERLREASEAYVTANRRAIRISSAFIPVIRMAILSGFLATFTVGGMMALRGDLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLATPVQVHDRGGRDLAETVRGEVEFAKVSFRYANSGEGVSDVQLLVPAGHTLALVGATGSGKSTLIKLLLRFHDAQSGDIRVDGQSIRELNLASLRGAIGLVSQDVYLFEGTVRDNIAYGRPDASEEDVIKAAQTAEAWSFIQALPDGLQTAVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLAKIGHGRTVIMIAHRLSTIVHADEIAVIHGGRVVEQGRHAELLAHDGRYAAQWRVQTG 604

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 22


Match Name	E-value	Identity	Description
EMLSAG00000000752	2.846e-30	39.69	supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 g...	[more]
EMLSAG00000000741	4.677e-26	25.30	supercontig:LSalAtl2s:LSalAtl2s111:116041:261433:1...	[more]
EMLSAG00000000090	1.385e-20	23.24	supercontig:LSalAtl2s:LSalAtl2s1014:9799:23913:-1 ...	[more]
EMLSAG00000005996	6.973e-15	25.71	supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-...	[more]
EMLSAG00000001342	1.909e-14	26.27	supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 ...	[more]
EMLSAG00000000074	8.751e-14	28.37	supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 ...	[more]
EMLSAG00000005788	9.439e-13	21.28	supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 ge...	[more]
EMLSAG00000000736	1.227e-8	27.27	supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 ...	[more]
EMLSAG00000012458	2.073e-8	29.95	supercontig:LSalAtl2s:LSalAtl2s917:121539:129683:-...	[more]
EMLSAG00000004492	2.112e-8	51.11	supercontig:LSalAtl2s:LSalAtl2s2344:67375:70448:-1...	[more]

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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|46396427\|sp\|Q8DAV2.1\|MSBA_VIBVU	3.773e-85	33.21	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|122064522\|sp\|Q0HHH4.1\|MSBA_SHESM	6.388e-85	34.35	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|81916845\|sp\|Q9CXJ4.1\|ABCB8_MOUSE	8.430e-85	33.63	RecName: Full=ATP-binding cassette sub-family B me...	[more]
gi\|81821624\|sp\|Q5QU36.1\|MSBA_IDILO	7.074e-84	35.12	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|122064529\|sp\|Q31FG2.1\|MSBA_THICR	9.777e-84	34.30	RecName: Full=Lipid A export ATP-binding/permease ...	[more]

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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|499713406\|ref\|WP_011394140.1\|	0.000e+0	72.44	ABC transporter ATP-binding protein [Hahella cheju...	[more]
gi\|1234072129\|ref\|WP_094706695.1\|	0.000e+0	74.00	ABC transporter ATP-binding protein [Hahella sp. C...	[more]
gi\|521078328\|ref\|WP_020409235.1\|	0.000e+0	72.96	ABC transporter ATP-binding protein [Hahella gangh...	[more]
gi\|497407268\|ref\|WP_009721466.1\|	0.000e+0	71.63	ABC transporter ATP-binding protein [Halomonas sp....	[more]
gi\|740692214\|ref\|WP_038477503.1\|	0.000e+0	71.45	ABC transporter ATP-binding protein [Halomonas cam...	[more]
gi\|1178484832\|ref\|WP_083006664.1\|	0.000e+0	71.28	ABC transporter ATP-binding protein [Halomonas sp....	[more]
gi\|1240438563\|ref\|WP_095603966.1\|	0.000e+0	71.45	ABC transporter ATP-binding protein [Halomonas sp....	[more]
gi\|1215204375\|ref\|WP_089039591.1\|	0.000e+0	71.45	ABC transporter ATP-binding protein [Halomonas sp....	[more]
gi\|258618592\|gb\|ACV84075.1\|	0.000e+0	70.93	ABC-type multidrug transport system protein [Halom...	[more]
gi\|1221668980\|ref\|WP_089797355.1\|	0.000e+0	71.18	ABC transporter ATP-binding protein [Halomonas kor...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2803_size12270	supercontig	scaffold2803_size12270:6100..7836 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:transmembrane transport

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1	snap_masked-scaffold2803_size12270-processed-gene-0.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2803_size12270:6100..7836-

gene from alignment at scaffold2803_size12270:6100..7836-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold2803_size12270-processed-gene-0.3 ID=snap_masked-scaffold2803_size12270-processed-gene-0.3|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2803_size12270:6100..7836- (Tigriopus kingsejongensis)
ATGCGCTATGCGCGTGGTTATCGGCGGCGCGTGATATTGGCGTCAGCCTC
TTCCATTATCAACAAGCTGTTTGATATTGCGCCAGAAATCTTGATCGGTA
TCGCCATTGATGTGGTGGTCAATCAGGACACCAGCTTTGTCGCAAGCTTT
GGTTTTGAAACCGCACATCAGCAAATCCTGGCGCTGGCGGTTTTGACTTT
TTTTATCTGGGCCGGTGAGTCCTTGTTTCAGTACTTTTATTTGGTGCTGT
GGCGCAACTTGGCGCAAGACTTACAGGCGGATATGCGGCTCAACGCCTAC
GAGCACATGCAGCGCCAATCGATGGGCTTCTTTGAAGAGCGCAGCACGGG
TGATTTAGTTGCGGTGCTAAATGACGACGTCAATCAGCTCGAGCGTTTCC
TCGACGGTGGCGCCAACGATTTAATCCAAGTTTTTGTCTCGGTGATCGCC
GTCGGCGCGGTGTTCTTTTATCTCTCGCCGCTAATTGCGCTGCTGGCTTT
TAGTCCGATACCGGTGATTATCTGGGGTGCGTTTTACTTTTTGCGTCGTG
CCAGTCCGCTGTATGCCGATGTGCGCGAGCGTGTGGGTTTGCTCAGTAGT
CGTCTGCAAAACAACATCGGTGGCATTGCGACTATTAAAAGCTTTACCTC
CGAAGGTATCGAGGCTGAACGCCTGCGCCAAGAAAGTGCCGCTTATGCGG
ACGCCAATCGCCGCGCTATCGCGGTCAGCTCGGCTTTTATTCCGGTGATT
CGCATGGCGGTGTTGGCGGGCTTTTTGTGCACCTTTGTGCTCGGTGGCTT
CAAGACACTAAACGGCGAGCTAGGTGTCGGTGCCTACGGTGTGTTGGTGT
TTTTGACTCAGCGCTTGCTCTGGCCGCTGACAAGCTTGGCGCAGACCATT
GATTTGTTTGAACGAGCAATGGCCAGTACGCGGCGAATATTGGGATTGCT
CGATACAACGATAGATATCCGCGACGAAGGTACGGCCACGCGTGCCAGCG
ATGCCAATGGCACCGTGAGCTTTGCGCAAGTTGGCTTTCGCTACAGAGCG
GGCGGGGCCGGCATTGAGGATTTCAGTGTTGAAGTGCCGGGCGGTACAAC
CTTGGCACTGGTCGGTGCCACCGGCTCTGGTAAATCCACCTTGATCAAGC
TGCTGCTGCGTTTTTACTCGGCGCAGGCGGGCAGTATTAAACTCGATGGG
GTTGATATCAATGATTTGCCCCTGAGCGAGCTGCGCGGTGCGATAGGTTT
TGTCAGCCAAGAGCCCTTTTTATTCGAAGGCAGTATTCGCGACAATATCG
CCTACGGTGACCCCAAGGCTAGTCTTGAGGCCATCACCTTGGCTGCGCAA
CAGGCAGAAGCTTGGGAGTTTATTGAGCGTTTGCCGCAGGGCTTGCATAC
GGCTGTCGGGGAGCGGGGCATATTGCTCTCAGGCGGGCAGCGACAACGCC
TTGCGCTAGCGCGCGCCCTGCTTAAAGATCCACAAGTGCTGGTATTGGAC
GAGGCCACCAGCGCAGTCGACAACGAAACCGAAGCCGCAATTCAGCGCTC
CTTGCGCAGGCTTGCCAAAGGCCGCACCGTCATTATGATCGCGCATCGGC
TATCAACGGTTGTACACGCGGAGCGCATTGTCGTGGTCGCCAACGGGAAA
ATAGTCGAACAAGGCAACCATGACACTTTGCTAGCGGCCAAGGGTCATTA
CCATTCCCAGTGGATGGTGCAAACCGGCGGCGCTTAG

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk03486

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