abc transporter, snap_masked-scaffold2803_size12270-processed-gene-0.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000745 (supercontig:LSalAtl2s:LSalAtl2s111:261767:264074:1 gene:EMLSAG00000000745 transcript:EMLSAT00000000745 description:"maker-LSalAtl2s111-snap-gene-2.13") HSP 1 Score: 50.447 bits (119), Expect = 1.091e-7 Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 0 Query: 448 AAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 A +QA+ + I L GL V + G S GQRQ + T++ IQ ++R TV+ IAHRL+TV+ ++R++V+++G+I E TLL + S + QTG A Sbjct: 11 ALEQAKLSQIISNLNGGLDAQVTDGGSNFSIGQRQLI-------------------------TDSLIQEAIRIKFSKCTVLTIAHRLNTVMDSDRMLVLSDGRIEEFDEPHTLLQNDHNLISHLVEQTGPA 116
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007911 (supercontig:LSalAtl2s:LSalAtl2s467:413568:427137:-1 gene:EMLSAG00000007911 transcript:EMLSAT00000007911 description:"maker-LSalAtl2s467-augustus-gene-3.18") HSP 1 Score: 51.6026 bits (122), Expect = 4.497e-7 Identity = 53/212 (25.00%), Postives = 98/212 (46.23%), Query Frame = 0 Query: 352 GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQA---GSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEG-SIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAK--GRTVIMIAHRLSTVVHA--ERIVVVANGKIVEQG 555 G ++D S+E+ GG A++G+ GSGK L++++ R AQ G I L+GV ++ + + + G V+Q+ L G ++++ + Y + + + + + L L LS + +RL + L++DP VL+LDE T +D I L AK R V++ + + + +R+ + G +V G Sbjct: 53 GVILKDVSMELHGGELSAVLGSKGSGKHALLEVISR--RAQGPTRGQILLNGVPMS---MRLFQESCGXVTQKXDLLPGXTVKETLEYSANLTVGSKVGSFVKHSRVKQVMADL--ALTNLANRNSESLSQSEYRRLVIGXQLVRDPVVLLLDEPTWDLDPLNTYFIVSILANHAKKYNRIVLLTMEKPRSDIFPFLDRVTYLCLGDVVYTG 257
BLAST of abc transporter vs. SwissProt
Match: gi|46396427|sp|Q8DAV2.1|MSBA_VIBVU (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 279.256 bits (713), Expect = 3.773e-85 Identity = 175/527 (33.21%), Postives = 278/527 (52.75%), Query Frame = 0 Query: 53 ETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYR-AGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAY--GDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 E+ + L L V G S F Y + W ++ ++ +R + H + + +F++ +G L++ + D Q+ +++ S+I + + FY S ++L+ PV+ W + +R + +++ +G+++S + + G + S+ + +E R S + + I +A P+I+M + L T+ +L G + V+ L+ PL +L F+R MA+ + + L+D + ++ GT + A G V+ + F Y A + S ++P G T+ALVG +GSGKST+ L RFY +G I+LDGVD+ D L LR VSQ LF +I +NIAY GD K S E I AA+ A A EFI ++ GL T VGE G LSGGQRQR+A+ARALL+D VL+LDEATSA+D E+E AIQ +L L K +TV++IAHRLST+ A++I+V+ +G +VE+G+H L+ G Y +Q G Sbjct: 60 ESDFLRTLPLLVFGLMFIRGISSFVSTYCLSW--VSGNVVMQVRRMVFNHYMQMPVSYFDKEKSGSLLSRITYDSEQVSAATSQALVSIVREGTSIIGLLVLMFYNSWQLSLVLILVAPVVAWAIGFVSKRFRKISKNMQTTMGIVTSSAEQMLKGHKVVLSYGGQEVEKSRFDVVSNQMRQQSMKLITAQAAANPIIQMIASIAIVVVLYLASVDTIKDQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAAAQTLFALVDLEPE-KNTGTYS-VERAKGEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGD-KYSREDIERAAELAHAMEFISKMENGLDTMVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGSHSELIEKDGAYAQLHRIQFG 581
BLAST of abc transporter vs. SwissProt
Match: gi|122064522|sp|Q0HHH4.1|MSBA_SHESM (RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|122064523|sp|Q0HTS8.1|MSBA_SHESR RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 279.256 bits (713), Expect = 6.388e-85 Identity = 203/591 (34.35%), Postives = 308/591 (52.12%), Query Frame = 0 Query: 3 YARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVA-------SFGFETAHQQIL--ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRR---AIAVSSAFIPVIRMAVLAGFLCTFVL--GGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGA-GIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSA-QAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDP-KASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 Y + + +L+ I+ L D A IG ID + T ++ S GF +Q +L + V+ F G + F Y + + ++ L DMR +EH + + ++ +TG+L++ + D Q+ R +++ V+VI + + FY S ++L P++ RR + ++ +G +S+ + I G + +F + E R A D NR +AV+ A + M V+ F FVL ++ +L G + ++ +L P+ +L + F+R +A+ + LLDT + D GT T A G + F V F Y ++ EV G TLALVG +GSGKST+ L+ RFY+ ++G IKLD V I D L LR + VSQ+ LF +I +NIAY P +A+ E I AA A A EFIE+LP+GL T VGE G+LLSGGQRQR+A+ARA+L+D VL+LDEATSA+D E+E AIQ+ L L + RT ++IAHRLST+ A++I+VV G+IVE+G H +LL G Y + +Q G Sbjct: 19 YLKPMKGMFLLSVCGLIVYGLVDAAFISFIGPFIDKGFSSSTPAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISY--MSARLIMDMRQQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGGQETETARF----AKINDRNRHQNMKLAVAQAVSQPLIM-VIGSFALAFVLYAASLDSMKADLTAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPE-SDTGTYT-VKRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG 600
BLAST of abc transporter vs. SwissProt
Match: gi|81916845|sp|Q9CXJ4.1|ABCB8_MOUSE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor) HSP 1 Score: 281.952 bits (720), Expect = 8.430e-85 Identity = 191/568 (33.63%), Postives = 297/568 (52.29%), Query Frame = 0 Query: 11 VILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLER----FLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQE---SAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIR-DEGTATRASDANGTVSFAQVGFRY--RAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRG-AIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567 ++LA ++++N + +L+G +++V + SF E+ L+V ++ + L + YLVL ++ + + DMR + + RQ + FF+ + TG LV+ L DV + + + G QV S++++ LSP + L+ P ++ L +E++ + +G + T+++F E E ER + E A+ R IA+ F + +A L T +GG +L G + +Q + + SL+ R +++ R+ + + I G D G+++F V F Y R G ++DF++++P G +ALVG +G GK+T+ LL RFY +AGS+ LDG D+ L S LRG IGF+SQEP LF +I +NI +G AS E + AA++A A EFI P G T VGERG LSGGQ+QRLA+ARAL+K P VL+LDEATSA+D E+E +Q +L R + GRTV++IAHRLSTV A I+V+ANG++ E G H+ LL G Y Sbjct: 134 IVLALGAALVN----VQIPLLLGQLVEIVAKYTRDHMGSFVSESRK-----LSVQLLLLYGVQGLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKLVISQGLRSCTQVIGSLVSLS----MLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIAL---FQGLSNIAFNCMVLGTLFIGGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMALSPVIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLY 685
BLAST of abc transporter vs. SwissProt
Match: gi|81821624|sp|Q5QU36.1|MSBA_IDILO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 275.789 bits (704), Expect = 7.074e-84 Identity = 183/521 (35.12%), Postives = 274/521 (52.59%), Query Frame = 0 Query: 61 ALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASD-ANGTVSFAQVGFRYRAGG-AGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPK-ASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 AL V FI G Y + W + MR ++HM + +GF ++ STGDL++ + D Q+ L++ V + + FY S ++L+ P++ RR + + ++ +G +++ + I G + + E+ R + + + N + + + VI+ V+ F + GEL GA+ L+ LL PL L F+R +A+ + +LD I++ D+G+ R D A G + F V F Y+ +E + +V G T+ALVG +GSGKST+ LL RFY + GSI LDG +IND L LR VSQ LF +I +NIAYG K S E I AA+QA EF + +P+GL T VGE G++LSGGQRQR+A+ARALL+D +L+LDEATSA+D E+E IQ +L L K RT I+IAHRLST+ +A+ I+V+ NG+I+E+G H LL +G Y +Q G+ Sbjct: 66 ALFVPFIFILRGSLNVASSYFLHWVGFK--VVTKMRQQLFDHMMKLPVGFHDQHSTGDLISKITYDTQQVAEASSRAVLVLVKEGAFVAGLLGLMFYQSWQLSLVFLVIGPLVAKVVGVVSRRFRKVSSRIQTAMGNVTTTAEQMINGHKVVIMHQGQKGESTRFSEINNITRNQNMKLVNTRAISTSVIQFIASLSLSMVLVIASFPEMLGELSAGAFTTLLTAMIMLLRPLKQLTNVNSDFQRGIAAATSVFAILDEPIEV-DKGS--RVVDRAAGDIVFDDVTFSYQKDDEPALEHINFKVDQGKTVALVGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTIANNIAYGASKDVSRENIIKAAEQAYVTEFTDSMPKGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLLDQEGAYFQLHNLQFSGS 581
BLAST of abc transporter vs. SwissProt
Match: gi|122064529|sp|Q31FG2.1|MSBA_THICR (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 275.404 bits (703), Expect = 9.777e-84 Identity = 177/516 (34.30%), Postives = 284/516 (55.04%), Query Frame = 0 Query: 59 ILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLY----ADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQR--LLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAG-GAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHY 567 +L L + FI G + +YF V+ +AQ ++R Y+ M + STG L++ + DV Q L + + ++++A+ A Y S + L+ P++ +F+ RA L D+++ +G ++ RL+ + G IK + SE E +R + + + + I VS+ +P++++ + A L V + +N E + A ++ ++T + P+ + +R MA+ + I +LDT + + S+ NG + F V F Y + +FS+ +P T ALVG +GSGK+TL L+ RFY G+I +DG+ ++++ L+ LR I FVSQ LF +I NIAYG + +AI AA+ A AWEFIE+LP+GL+T +G+ G LLSGGQRQRLA+ARA LK+ +L++DEATSA+DN++E IQ ++ L K RTVI+IAHRLST+ +A++IVV+ G + EQG H L+A Y Sbjct: 63 LLPLQLAAVFIVKG--VAEYFSKVMSTWIAQKAIFNIRSELYDKMLCLPQAEHNQTSTGTLMSKVTYDVTQTGNALSEAWIVIARDSLTILALLATLIYYSWQLTLVMLIIGPIVA----FFIDRAGKLMRTSSTDMQDNMGEMTHRLEEGLKGYQDIKIYGSEKYELDRFKASAESLRQNTMKVIKVSALNVPLVQV-IAAIALSIVVYIAVQMVNAE-TMTAGNLITYVTAMGLIFEPIRRITNINATVQRGMAAAKSIFAILDTPSEANN--GKIELSNVNGQIDFNNVSFSYLGTEKTALNNFSLSIPARKTTALVGQSGSGKTTLANLITRFYQVNHGTITIDGIALDEIELNNLRANIAFVSQNVVLFNDTIAANIAYGHEEYDEQAIMNAAKAAHAWEFIEKLPEGLNTIIGDNGTLLSGGQRQRLAIARAFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALNSIY 568
BLAST of abc transporter vs. nr
Match: gi|499713406|ref|WP_011394140.1| (ABC transporter ATP-binding protein [Hahella chejuensis] >gi|83631096|gb|ABC27063.1| ABC-type multidrug transport system, ATPase and permease components [Hahella chejuensis KCTC 2396]) HSP 1 Score: 860.522 bits (2222), Expect = 0.000e+0 Identity = 418/577 (72.44%), Postives = 488/577 (84.58%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I A + SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF T QQILAL VLTFFIWAGES+F+Y +L++WRNL Q LQAD+R +AY+H+QR M FFE RS+G LV+++NDDVNQLERFLDGGAN+LIQVFV+V+AVG VF +SP IALLAF+PIP+I+WGAF+FL+RA+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E E+ERLR+ S AY ANR+AIAVSSAFIPVIRMA+LAGFL TF +GG + L+GEL GAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILG+++T ID+RDEG+ + G V F V F Y AG G+E+ +++V G+TLALVGATGSGKSTLIKLLLRFY + GSI +DGV I LPL ELRGAIG VSQ+ FLFEGSIR+NIAYG P AS E I AA+ AEAWEFI RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+ +A GRTV+MIAHRLST+VHA+ IVVV +GK+VEQG+H LL KG Y SQW VQTGG Sbjct: 35 LRYARGYRRRIIAAGSCSIINKLFDIAPEILIGIAIDVVVNKEQSFVAAMGFNTPQQQILALGVLTFFIWAGESIFEYLHLIMWRNLGQVLQADLRQDAYDHVQRLDMAFFESRSSGQLVSIINDDVNQLERFLDGGANNLIQVFVTVVAVGGVFLAISPFIALLAFTPIPIIVWGAFFFLKRANPLYADVREKVGGLASRLANNIGGIATIKSFTAEAQESERLREASDAYVQANRKAIAVSSAFIPVIRMAILAGFLATFTVGGLQALSGELNAGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGVIETPIDVRDEGSHSLPQPVRGEVDFQNVSFEYAAGAGGVENVNLQVKAGSTLALVGATGSGKSTLIKLLLRFYRPRQGSILVDGVPIEQLPLKELRGAIGLVSQDVFLFEGSIRENIAYGRPTASEEEIIAAARTAEAWEFIARLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKHIAHGRTVVMIAHRLSTIVHADNIVVVDHGKVVEQGDHRQLLERKGMYWSQWQVQTGG 611
BLAST of abc transporter vs. nr
Match: gi|1234072129|ref|WP_094706695.1| (ABC transporter ATP-binding protein [Hahella sp. CCB-MM4] >gi|1233736063|gb|OZG74740.1| ABC transporter [Hahella sp. CCB-MM4]) HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0 Identity = 427/577 (74.00%), Postives = 491/577 (85.10%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I AS SIINKLFDIAPEILIGIAIDVVVNQ+ SFVA+ GF T +QIL L +LTFFIWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+QR M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVGAVFF LSP IALLAF+PIP+IIWGAFYFLR+A+PLYADVRE+VG L+SRL NNIGGIATIKSFT+E +E++RLR+ S Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF L G+L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T + G VSF QV F Y AG G+ + V GTTLALVGATGSGKSTLIKLLLRFY Q+G I LDG+ I LPL LRGAIG VSQ+ FLFEG+IRDNI+YG P A +AI AA+ AEAWEFI+RLPQGL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+ +G+IVEQGNH+ LL +G Y SQW VQTGG Sbjct: 17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNQEESFVAAMGFSTPKEQILILGLLTFFIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQRLDMAFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGAVFFVLSPFIALLAFTPIPIIIWGAFYFLRKATPLYADVREKVGGLASRLANNIGGIATIKSFTAELMESQRLRESSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGDLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTRTPDAPIKGEVSFQQVDFEYAAGAGGVHRVDLNVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKTLRGAIGLVSQDVFLFEGTIRDNISYGHPGAGDDAIIDAARTAEAWEFIQRLPQGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEHGRIVEQGNHEQLLERRGAYWSQWQVQTGG 593
BLAST of abc transporter vs. nr
Match: gi|521078328|ref|WP_020409235.1| (ABC transporter ATP-binding protein [Hahella ganghwensis]) HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0 Identity = 421/577 (72.96%), Postives = 491/577 (85.10%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGG 577 +RYARGYRRR+I AS SIINKLFDIAPEILIGIAIDVVVN++ SFVA+ GF +A +QI+ L +LTF IWAGESLF+Y +L+LWRNL Q LQ+D+R +AY+H+Q+ M FFE RS+G LV+VLNDDVNQLERFLDGGAN+LIQVFV+V+AVG VFF LSP+IALLAF+PIP+IIWGAFYFLR+A+PLYADVR++VG L+SRL NNIGGIATIKSFT+E +E+ERLR S Y +ANR+AIAVSSAFIPVIRMA+LAGFL TF +GGF L G L VGAYGVLVFLTQRLLWPLT+LAQT+DLFERAMASTRRILGL++T ID+RDEGT T + G VSF +V F Y AG G++ +EV GTTLALVGATGSGKSTLIKLLLRFY Q+G I LDG+ I LPL LRGAIG VSQ+ FLFEG+IRDNIAYG P A +AI AA+ AEAWEFI+RLP+GL T VGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRT++MIAHRLST+VHAE IVV+ G++VEQGNH++LL +G Y SQW VQTGG Sbjct: 17 LRYARGYRRRIISASLCSIINKLFDIAPEILIGIAIDVVVNKEESFVAALGFTSAKEQIIVLGILTFLIWAGESLFEYLHLILWRNLGQRLQSDLRQDAYDHIQKLDMSFFEARSSGQLVSVLNDDVNQLERFLDGGANNLIQVFVTVVAVGGVFFVLSPVIALLAFTPIPIIIWGAFYFLRKATPLYADVRDQVGGLASRLANNIGGIATIKSFTAEPMESERLRDSSERYVEANRKAIAVSSAFIPVIRMAILAGFLATFTIGGFMALEGSLNVGAYGVLVFLTQRLLWPLTNLAQTVDLFERAMASTRRILGLIETPIDVRDEGTQTPENPIKGEVSFRKVNFEYAAGAGGVQGIDLEVKAGTTLALVGATGSGKSTLIKLLLRFYRPQSGHIDLDGIPIEQLPLKVLRGAIGLVSQDVFLFEGTIRDNIAYGKPGAEDDAIIDAAKTAEAWEFIQRLPEGLDTPVGERGVKLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTIVMIAHRLSTIVHAENIVVLEQGRVVEQGNHESLLERRGAYWSQWQVQTGG 593
BLAST of abc transporter vs. nr
Match: gi|497407268|ref|WP_009721466.1| (ABC transporter ATP-binding protein [Halomonas sp. TD01] >gi|338766621|gb|EGP21538.1| ABC transporter, transmembrane region [Halomonas sp. TD01]) HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0 Identity = 414/578 (71.63%), Postives = 469/578 (81.14%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE TA A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTAPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEQGRVAERGNHSSLLVADGHYAAQWRVQTGAA 607
BLAST of abc transporter vs. nr
Match: gi|740692214|ref|WP_038477503.1| (ABC transporter ATP-binding protein [Halomonas campaniensis] >gi|641740248|gb|AIA73526.1| ABC transporter [Halomonas campaniensis]) HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1178484832|ref|WP_083006664.1| (ABC transporter ATP-binding protein [Halomonas sp. GT]) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 412/578 (71.28%), Postives = 467/578 (80.80%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 30 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVQFEAVSFHYASSQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 607
BLAST of abc transporter vs. nr
Match: gi|1240438563|ref|WP_095603966.1| (ABC transporter ATP-binding protein [Halomonas sp. WN018] >gi|1240183621|gb|PAU71501.1| ABC transporter [Halomonas sp. WN018]) HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 468/578 (80.97%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y + G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL A GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYASSQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPIIEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLVADGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1215204375|ref|WP_089039591.1| (ABC transporter ATP-binding protein [Halomonas sp. N3-2A] >gi|1214955929|gb|ASK20384.1| ABC transporter [Halomonas sp. N3-2A]) HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0 Identity = 413/578 (71.45%), Postives = 467/578 (80.80%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++DE T A+ G V F V F Y A G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I ++ + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDESTTPLAAPVKGEVRFEAVSFHYAASQVGVSGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPVSGRVLVDGQPITEVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGSA 601
BLAST of abc transporter vs. nr
Match: gi|258618592|gb|ACV84075.1| (ABC-type multidrug transport system protein [Halomonas sp. HTNK1]) HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0 Identity = 410/578 (70.93%), Postives = 464/578 (80.28%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTGGA 578 +RYA+GYRRR+ A+A SIINKLFDIAPEILIG+AIDVVVNQ+ SFVA GFET HQQI LAVLTFFIWAGESLF+Y + +LWRNLAQ LQADMR + YEH QR M FFE +S+G LVA +NDDVNQLERFLDGGAN LIQV V+VIAVGAVFF LSPLIALLAF+PIP+IIWGAF+F R+A PLY+DVRE+VG L+SRL NN+ GIATIKSFTSE EAERLR S AY +ANRRAI VSSAFIPVIRMA+LAGFL TF +GG LNG L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMAST+RIL LL+ I ++D+ + G V F V F Y A G+ + VP G TLALVGATGSGKSTLIKLLLRFY +G + +DG I + + LR AIG VSQ+ +LFEGSIRDNIAYG P AS AI AA+ AEAW FIE LPQGL T VGERG+LLSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL+R+A GRTVIMIAHRLST+VHA+ IVV+ G++ E+GNH +LL GHY +QW VQTG A Sbjct: 24 LRYAKGYRRRIAAATACSIINKLFDIAPEILIGVAIDVVVNQENSFVARLGFETPHQQITILAVLTFFIWAGESLFEYLFQILWRNLAQRLQADMRQDTYEHAQRLDMAFFESKSSGQLVATMNDDVNQLERFLDGGANALIQVGVTVIAVGAVFFVLSPLIALLAFTPIPLIIWGAFFFQRKAGPLYSDVREKVGDLASRLSNNLSGIATIKSFTSEAREAERLRDASEAYLEANRRAIKVSSAFIPVIRMAILAGFLATFTVGGMMALNGSLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTKRILDLLEVPITVKDQSAMPLTAPVKGEVRFEAVSFHYAASQVGVNGVDLHVPAGNTLALVGATGSGKSTLIKLLLRFYDPASGRVLVDGQPITQVSMHSLRQAIGLVSQDVYLFEGSIRDNIAYGKPDASEAAIIDAAKTAEAWSFIETLPQGLETPVGERGVLLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLKRIAHGRTVIMIAHRLSTIVHADEIVVIEKGRVAERGNHSSLLEVDGHYAAQWRVQTGAA 601
BLAST of abc transporter vs. nr
Match: gi|1221668980|ref|WP_089797355.1| (ABC transporter ATP-binding protein [Halomonas korlensis]) HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0 Identity = 410/576 (71.18%), Postives = 470/576 (81.60%), Query Frame = 0 Query: 1 MRYARGYRRRVILASASSIINKLFDIAPEILIGIAIDVVVNQDTSFVASFGFETAHQQILALAVLTFFIWAGESLFQYFYLVLWRNLAQDLQADMRLNAYEHMQRQSMGFFEERSTGDLVAVLNDDVNQLERFLDGGANDLIQVFVSVIAVGAVFFYLSPLIALLAFSPIPVIIWGAFYFLRRASPLYADVRERVGLLSSRLQNNIGGIATIKSFTSEGIEAERLRQESAAYADANRRAIAVSSAFIPVIRMAVLAGFLCTFVLGGFKTLNGELGVGAYGVLVFLTQRLLWPLTSLAQTIDLFERAMASTRRILGLLDTTIDIRDEGTATRASDANGTVSFAQVGFRYRAGGAGIEDFSVEVPGGTTLALVGATGSGKSTLIKLLLRFYSAQAGSIKLDGVDINDLPLSELRGAIGFVSQEPFLFEGSIRDNIAYGDPKASLEAITLAAQQAEAWEFIERLPQGLHTAVGERGILLSGGQRQRLALARALLKDPQVLVLDEATSAVDNETEAAIQRSLRRLAKGRTVIMIAHRLSTVVHAERIVVVANGKIVEQGNHDTLLAAKGHYHSQWMVQTG 576 ++YARGYRRR+I ASA SIINKLFDIAPEILIG+AIDVVVNQ+TSFVA GFE+A +QI+ L VLTFFIWAGES+F+Y + VLWRNLAQ LQ+D+R +AYEH QR M FFE RS+G LVA +NDDVNQLERFLDGGAN +IQV V+V+AVGAVFF LSPLIALLAF+PIP+I+WGAFYF R+A PLYADVRE+VG LSSRL NN+ GIATIKSFT+E EAERLR+ S AY ANRRAI +SSAFIPVIRMA+L+GFL TF +GG L G+L VGAYGVLVFLTQRLLWPLT LAQ IDLFERAMASTRRIL LL T + + D G A G V FA+V FRY G G+ D + VP G TLALVGATGSGKSTLIKLLLRF+ AQ+G I++DG I +L L+ LRGAIG VSQ+ +LFEG++RDNIAYG P AS E + AAQ AEAW FI+ LP GL TAVGERG+ LSGGQRQRL+LARALLKDP +LVLDEATSAVDNETEAAIQRSL ++ GRTVIMIAHRLST+VHA+ I V+ G++VEQG H LLA G Y +QW VQTG Sbjct: 29 LKYARGYRRRIIAASACSIINKLFDIAPEILIGVAIDVVVNQETSFVARLGFESAQEQIVMLGVLTFFIWAGESIFEYLFQVLWRNLAQRLQSDLRQDAYEHAQRLDMSFFESRSSGQLVATMNDDVNQLERFLDGGANAMIQVVVTVLAVGAVFFVLSPLIALLAFTPIPLIVWGAFYFQRKAGPLYADVREKVGDLSSRLSNNLAGIATIKSFTAETREAERLREASEAYVTANRRAIRISSAFIPVIRMAILSGFLATFTVGGMMALRGDLNVGAYGVLVFLTQRLLWPLTGLAQVIDLFERAMASTRRILDLLATPVQVHDRGGRDLAETVRGEVEFAKVSFRYANSGEGVSDVQLLVPAGHTLALVGATGSGKSTLIKLLLRFHDAQSGDIRVDGQSIRELNLASLRGAIGLVSQDVYLFEGTVRDNIAYGRPDASEEDVIKAAQTAEAWSFIQALPDGLQTAVGERGVRLSGGQRQRLSLARALLKDPPILVLDEATSAVDNETEAAIQRSLAKIGHGRTVIMIAHRLSTIVHADEIAVIHGGRVVEQGRHAELLAHDGRYAAQWRVQTG 604 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2803_size12270:6100..7836- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2803_size12270-processed-gene-0.3 ID=snap_masked-scaffold2803_size12270-processed-gene-0.3|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2803_size12270:6100..7836- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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