cytochrome b subunit of cytochrome bc1, snap_masked-scaffold2845_size11892-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|298286798|sp|O31215.2|CYB_ALLVD (RecName: Full=Cytochrome b) HSP 1 Score: 479.559 bits (1233), Expect = 9.165e-164 Identity = 227/332 (68.37%), Postives = 273/332 (82.23%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKK----NKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 ++WID RFPLSET+ H+S+Y+APKN NFW +FG L+ + L+IQ+VTG++L M+YKPD AF SVEYIMRDVD+GWLIRYMHSTGAS FFIV+YLHMFRGL++GSY+KPREL+W+ G+ IY+ +MA AF GYLLPWGQMSYWGAQVI++LF +P +G L+ WVRGDF++SD TLNRFFAFH + +P +L LVFLHIVALHHVGSNNPDG+EIK+ N+ +D P DGIPFHPYYTVKD G VFL +F V+FF P MGG FLE NF PA+P++TP HIAPVWYFTPFYAMLRA P M GS FPGVVVM AAI++LF LPW+DR Sbjct: 9 LSWIDKRFPLSETWRNHLSEYYAPKNLNFWSFFGSLAILTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHMFRGLLWGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHFL-LPFLLAGLVFLHIVALHHVGSNNPDGIEIKEGPKGNRWSDKAPADGIPFHPYYTVKDLMGVVVFLAIFGYVMFFNPTMGGLFLEAPNFQPANPMQTPAHIAPVWYFTPFYAMLRAVPPMYGSQFPGVVVMFAAILILFVLPWLDR 339
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6014852|sp|O54070.1|CYB_RICPR (RecName: Full=Cytochrome b) HSP 1 Score: 338.576 bits (867), Expect = 3.959e-109 Identity = 175/335 (52.24%), Postives = 226/335 (67.46%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGG 334 + WID R P+ ++ H S Y PKN N+ + G ++ + L+IQ++TG+ L M+Y P AF SVE IMR+V+YGWL+RY H+ GAS FF +YLH+ RGL YGSY+ PREL+W G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP +G + W+ G F V + TLNRFFA H + P I+V LV LH+VALH GSNNP G+++K K D IPFHPYYTVKD G GV+ I+F +F+AP +L H N+IPA+PL TP HI P WYF PFYA+LRA PS +G GV +M +IVVLF LPW+D G Sbjct: 14 IEWIDYRLPIF-SFLKHFSYYQTPKNLNYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFESVERIMRNVNYGWLLRYTHAVGASMFFAAIYLHIARGLYYGSYKTPRELLWHIGIIIFLIMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLVGEPIVIWLWGGFSVDNPTLNRFFALHYL-FPFIIVVLVILHLVALHQHGSNNPKGIDVKSTK-------DTIPFHPYYTVKDFVGFGVYFIIFAYFIFYAPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVFLMFGSIVVLFLLPWLDTSKIRSG 331
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|123266200|sp|Q1RIA4.1|CYB_RICBR (RecName: Full=Cytochrome b) HSP 1 Score: 337.035 bits (863), Expect = 1.720e-108 Identity = 173/328 (52.74%), Postives = 227/328 (69.21%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327 + WID R P+ ++ H S Y PKN ++ + G ++ + L+IQ++TG+ L M+Y P AF SVE IMR+V+YGWL+RY H+ GAS FF VYLH+ RGL YGSY+ PREL+W G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG ++ W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH GSNNP G+++K P D IPFHPYYTVKD G GV+ I+F +F+ P +L H N+IPA+PL TP HI P WYF PFYA+LRA PS +G GV++M +I VLF LPW+D Sbjct: 16 IEWIDYRLPVF-SFLKHFSHYQTPKNLSYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVEKIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGKSIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVLLMFGSIFVLFLLPWLD 326
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|81854122|sp|Q92IR1.1|CYB_RICCN (RecName: Full=Cytochrome b) HSP 1 Score: 337.035 bits (863), Expect = 1.720e-108 Identity = 174/328 (53.05%), Postives = 225/328 (68.60%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327 + WID R P+ + H S Y PKN N+ + G ++ + L+IQ++TG+ L M+Y P AF SVE IMR+V+YGWL+RY H+ GAS FF VYLH+ RGL YGSY+ PREL+W G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG + W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH GSNNP G+++K P D IPFHPYYTVKD G GV+ I+F +F+ P +L H N+IPA+PL TP HI P WYF PFYA+LRA PS +G GV++M +I VLF LPW+D Sbjct: 14 IEWIDYRLPIFAFLK-HFSHYQTPKNLNYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGEFIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAMPSKLG----GVLLMFGSIFVLFLLPWLD 324
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|75535806|sp|Q4UJM4.1|CYB_RICFE (RecName: Full=Cytochrome b) HSP 1 Score: 336.265 bits (861), Expect = 3.307e-108 Identity = 172/328 (52.44%), Postives = 227/328 (69.21%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327 + WID R P+ ++ H S Y PKN ++ + G ++ + L+IQ++TG+ L M+Y P AF SVE IMR+V+YGWL+RY H+ GAS FF VYLH+ RGL YGSY+ PREL+W G+ I++ +MA AFMGY+LPWGQMSYWGA VI +LF+ IP IG ++ W+ G F V + TLNRFF+ H + +P I+VALV LH+VALH GSNNP G+++K P D IPFHPYYTVKD G GV+ I+F +F+ P +L H N++PA+PL TP HI P WYF PFYA+LRA PS +G GV++M +I VLF LPW+D Sbjct: 14 IEWIDYRLPIF-SFLKHFSHYQTPKNLSYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGESIVTWLWGGFSVDNPTLNRFFSLHYL-LPFIIVALVMLHLVALHQHGSNNPKGIDVKS-------PKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYVPANPLVTPAHIVPEWYFLPFYAILRAVPSKLG----GVLLMFGSIFVLFLLPWLD 324
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|81826324|sp|Q68X99.1|CYB_RICTY (RecName: Full=Cytochrome b) HSP 1 Score: 333.183 bits (853), Expect = 6.166e-107 Identity = 171/336 (50.89%), Postives = 223/336 (66.37%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335 + WID R P+ ++ H S Y PKN N+ + G ++ + L+IQ++TG+ L M+Y P AF SVE IMR+V+YGWL+RY H+ GAS FF +YLH+ RGL YGSY+ PREL+W G+ I++ +MA AFMGY+LPWGQMSYW A VI +LF+ IP IG + W+ G F V + TLNRFF+ H + P I+VALV LH++ALH GSNNP G+++K K D IPFHPYYTVKD G GV+ I+F +F+ P +L H N+IPA+PL TP HI P WYF PFYA+LRA PS + GV +M +I VLF LPW+D G Sbjct: 14 IEWIDYRLPIFSFFK-HFSYYQTPKNLNYLWTLGSIAGIALVIQIITGVILAMHYTPHVDHAFESVERIMRNVNYGWLLRYTHTVGASMFFATIYLHIARGLYYGSYKTPRELLWHIGIIIFLIMMATAFMGYVLPWGQMSYWSATVITNLFSAIPLIGEPIVIWLCGGFSVDNPTLNRFFSLHYL-FPFIIVALVILHLLALHQHGSNNPKGIDVKSTK-------DTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPN----YLGHPDNYIPANPLVTPAHIVPEWYFRPFYAILRAVPSKLA----GVFLMFGSIFVLFLLPWLDTSKIRSGN 332
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|117886|sp|P23134.1|CYB_RHORU (RecName: Full=Cytochrome b) HSP 1 Score: 323.168 bits (827), Expect = 4.487e-103 Identity = 174/327 (53.21%), Postives = 224/327 (68.50%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327 + W D+R P+ + Y AP+N N+++ FG L+ + +II + TGIFL M+Y AF SVE IMRDV+YGWL+RYMH+ GAS FFIVVY+HMFRGL YGSY+ PRE++W G+ I + +MA AFMGY+LPWGQMS+WGA VI +LF+ IP +G + + G F V + TLNRFF+ H + P++L A+VFLH+ ALH SNNP G++ K P D IPFHPYYTVKD FG G+FL+VF VFFAP G E N+IPA+P+ TP HI P WYF PFYA+LRA P +G GV+ M AI++LF LPW+D Sbjct: 12 LKWFDERLPVLTVAHKELVVYPAPRNLNYFWNFGSLAGIAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYL-FPMLLFAVVFLHMWALHVKKSNNPLGIDAKG-------PFDTIPFHPYYTVKDAFGLGIFLMVFCFFVFFAPNFFG---EPDNYIPANPMVTPTHIVPEWYFLPFYAILRAVPDKLG----GVLAMFGAILILFVLPWLD 323
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6014851|sp|P81378.1|CYB_BLAVI (RecName: Full=Cytochrome b) HSP 1 Score: 308.916 bits (790), Expect = 2.656e-97 Identity = 158/326 (48.47%), Postives = 208/326 (63.80%), Query Frame = 0 Query: 3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327 W+D R P+ + PKN N+ Y FG + V LIIQ+V+G+ L M+Y AF S+E+IMRDV+YGWLIRY+H GASFFF VY H FRG+ YGSY++PRE++W+ G+ I + +MA AFMGY+LPWGQMS+WGA VI +LF+ IP+IG + W+ G + V + TL RF++ H + +P ++V +V LH+ ALH G NP GVE+K K D + F P+ KD GV I F VFF P +L HA N+IPA+P TP HI P WY PFYA+LRA P +G GV+ M A+VVL FLPW+D Sbjct: 16 WLDTRLPIVRMMYDQFVAFPVPKNINYAYAFGAILAVFLIIQIVSGVVLAMHYVAQDTLAFASIEHIMRDVNYGWLIRYIHMNGASFFFFAVYAHTFRGMYYGSYKEPREVLWILGVIIIILMMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGDPIVTWLWGGYSVGNPTLTRFYSLHYL-LPFVIVGVVMLHVWALHVTGQTNPTGVEVKSEK-------DTVRFTPFALTKDAVALGVCFIAFAWFVFFVPN----YLGHADNYIPANPGVTPAHIVPEWYLLPFYAILRAVPDKLG----GVIAMFGALVVLLFLPWLD 325
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|338818076|sp|D5ANZ3.1|CYB_RHOCB (RecName: Full=Cytochrome b) HSP 1 Score: 307.375 bits (786), Expect = 1.549e-96 Identity = 161/349 (46.13%), Postives = 219/349 (62.75%), Query Frame = 0 Query: 3 WIDDRFPL-SETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRA--------------TPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335 W+ DR P+ Y+ M PKN N+W+ +G++ L++Q+VTGI L M+Y P AF SVE+IMRDV+ GW +RY+H+ GAS FF+ VY+H+FRGL YGSY+ PRE+ W+ GM IY+ +M AFMGY+LPWGQMS+WGA VI LF IP IGP++ W+ G V + TLNRFF+ H + +P ++ ALV +HI A H G+NNP GVE+++ AD D +PF PY+ +KD F + L+ FFAVV + P +L H N++ A+PL TP HI P WYF PFYA+LRA T ++ + F GV+ M AI V+ PW+D G Sbjct: 18 WLHDRLPIVGLVYDTIMIP--TPKNLNWWWIWGIVLAFTLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADA-EKDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPN----YLGHPDNYVQANPLSTPAHIVPEWYFLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGA 358
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|338817833|sp|P0CY47.1|CYB_RHOCA (RecName: Full=Cytochrome b) HSP 1 Score: 306.605 bits (784), Expect = 2.873e-96 Identity = 161/349 (46.13%), Postives = 219/349 (62.75%), Query Frame = 0 Query: 3 WIDDRFPL-SETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRA--------------TPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGGG 335 W+ DR P+ Y+ M PKN N+W+ +G++ L++Q+VTGI L ++Y P AF SVE+IMRDV+ GW +RY+H+ GAS FF+ VY+H+FRGL YGSY+ PRE+ W+ GM IY+ +M AFMGY+LPWGQMS+WGA VI LF IP IGP++ W+ G V + TLNRFF+ H + +P ++ ALV +HI A H G+NNP GVE+++ AD D +PF PY+ +KD F + L+ FFAVV + P +L H N+I A+PL TP HI P WYF PFYA+LRA T ++ + F GV+ M AI V+ PW+D G Sbjct: 18 WLHDRLPIVGLVYDTIMIP--TPKNLNWWWIWGIVLAFTLVLQIVTGIVLAIDYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADA-EKDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPN----YLGHPDNYIQANPLSTPAHIVPEWYFLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGA 358
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1224977147|ref|WP_092992112.1| (cytochrome bc complex cytochrome b subunit [Thiohalomonas denitrificans] >gi|1081478618|emb|SCZ50524.1| ubiquinol-cytochrome c reductase cytochrome b subunit [Thiohalomonas denitrificans]) HSP 1 Score: 520.776 bits (1340), Expect = 1.567e-177 Identity = 245/328 (74.70%), Postives = 286/328 (87.20%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 M W+DDRFP S+ ++ H+S+Y+APKNFNFWY+FG L+ ++L+IQ+VTGIFLTM+YKPD AF+SVEYIMRDV++GWLIRY+HSTGAS FF+VVYLHMFRGL+YGSY++PREL+W+FGM IY+ALMAEAF GYLLPWGQMSYWGAQVI+SLF IP +G L+ W+RGDF++SD+TLNRFFAFHVIAVPL+LVALV HI+ALH VGSNNPDGVEIKKNK+ +GIP DGIPFHPYYTVKD G VFL+ F VVFF PEMGGYFLEHANF PADPLKTP HIAPVWYFTPFYA+LRA P F GVV MGAA+V+LFFLPW+DR Sbjct: 8 MGWVDDRFPASKMWKEHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLTMSYKPDATLAFSSVEYIMRDVNWGWLIRYIHSTGASAFFVVVYLHMFRGLIYGSYKQPRELLWIFGMLIYLALMAEAFFGYLLPWGQMSYWGAQVIVSLFGAIPIVGDELSLWIRGDFVISDVTLNRFFAFHVIAVPLVLVALVAAHILALHEVGSNNPDGVEIKKNKDENGIPKDGIPFHPYYTVKDIVGVVVFLMFFSIVVFFMPEMGGYFLEHANFEPADPLKTPLHIAPVWYFTPFYAILRAIP----DKFLGVVTMGAAVVILFFLPWLDR 331
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1175983596|gb|OQW93143.1| (cytochrome b [Beggiatoa sp. IS2]) HSP 1 Score: 520.005 bits (1338), Expect = 3.332e-177 Identity = 244/329 (74.16%), Postives = 282/329 (85.71%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKN-ADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 + WID RFPL++ + H++QY+APKNFNFWYYFG L+ ++L+IQ+ TG+FLTMNYKPD AF+SVEYIMRDV++GWLIRYMHSTGASFFF+VVYLHMFR LMYGSY+KPREL+W+ GMFIY+ LMAEAFMGYLLPWGQMSYWGAQVI+SLF IP+IG LT W+RGDF++ D TLNRFFA HV+AVP++L+ LVF+HI+ALH VGSNNPDGVEIKK K+ GIPLDGIPFHPYYTVKD G VFLIVF V+FFAPEM GYFLEHANF+PADPLKTP HIAPVWYFTPFYA+LRA P F GV+ MGAAI VLF LPW+DR Sbjct: 8 IAWIDARFPLTKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIATGVFLTMNYKPDAKLAFSSVEYIMRDVEWGWLIRYMHSTGASFFFVVVYLHMFRALMYGSYKKPRELLWLIGMFIYLCLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFIGEQLTIWIRGDFVIGDATLNRFFALHVVAVPIVLLGLVFVHIIALHEVGSNNPDGVEIKKLKDKTTGIPLDGIPFHPYYTVKDIVGVAVFLIVFAFVIFFAPEMNGYFLEHANFVPADPLKTPAHIAPVWYFTPFYAILRAVP----DKFMGVIAMGAAIAVLFVLPWLDR 332
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1246782221|ref|WP_096366953.1| (cytochrome bc complex cytochrome b subunit [Thiohalobacter thiocyanaticus] >gi|1212590359|dbj|BAZ94914.1| cytochrome B subunit of cytochrome bc1 [Thiohalobacter thiocyanaticus]) HSP 1 Score: 519.235 bits (1336), Expect = 7.895e-177 Identity = 239/328 (72.87%), Postives = 286/328 (87.20%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 M WID RFPLS + HM++Y+APKNFNFWY+FG L+ ++L+IQ+V+GIFLTM++KPD AF SVEYIMRDV++GWLIRY+HSTGAS FFIVVYLHMFRG++YGSY++PRELIW+FG+ I++ALMAEAF GYLLPWGQMSYWGAQVI+SLF IP +G L W+RGD++++D TLNRFFAFHVIAVPL+L+ALV HI+ALH VGSNNPDG+EIKKNK+A+GIP+DGIPFHPYY+VKD FG GVFLI F VVFF PEMGGYF+E NF PADPLKTPEHIAPVWYFTP+YA+LRA PS+ GSAFPGV MG A+++ F LPW+DR Sbjct: 14 MGWIDGRFPLSSLWNDHMAKYYAPKNFNFWYFFGSLALLVLVIQIVSGIFLTMHFKPDAERAFASVEYIMRDVEWGWLIRYIHSTGASAFFIVVYLHMFRGMLYGSYKQPRELIWIFGVLIFLALMAEAFFGYLLPWGQMSYWGAQVIISLFAAIPIVGDDLALWIRGDYVIADATLNRFFAFHVIAVPLVLIALVVAHIMALHEVGSNNPDGIEIKKNKDANGIPVDGIPFHPYYSVKDIFGVGVFLIFFAIVVFFVPEMGGYFIEPPNFEPADPLKTPEHIAPVWYFTPYYAILRAVPSIAGSAFPGVAAMGVAVLIFFLLPWLDR 341
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1270433689|gb|PHS26387.1| (cytochrome b [Methylophaga sp.]) HSP 1 Score: 519.235 bits (1336), Expect = 7.936e-177 Identity = 238/328 (72.56%), Postives = 288/328 (87.80%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 M W+D RFP ++ +E H+S+Y+APKNFNFWYYFG L+ ++L++Q+VTGIFLTM+YKPD A AF SVEYIMRDV++GWLIRY+HSTGAS FF+VVYLHMFRG+MYGSY+KPREL+W+FGM IY+ALMAEAFMGYLLPWGQ SYWGAQVI++LF ++P+IGP + W+RGDF+V+D TLNRFFAFHVIAVPL+L+ LV HI+ALH VGSNNPDGVEIK +K+ +GIPLDGIPFHPYY+VKD G VFL +F ++F+APE GG+FLE NFIPADPLKTPEHI P+WYFTPFYA+LRA PS+ GSAFPGV+ MGAA V+LF LPW+DR Sbjct: 6 MGWVDARFPATKMWEDHLSKYYAPKNFNFWYYFGSLAMLILVLQIVTGIFLTMHYKPDAALAFASVEYIMRDVNWGWLIRYLHSTGASAFFVVVYLHMFRGIMYGSYKKPRELVWIFGMCIYMALMAEAFMGYLLPWGQTSYWGAQVIINLFGSVPFIGPEIALWIRGDFVVADATLNRFFAFHVIAVPLVLLGLVAAHIIALHEVGSNNPDGVEIKNHKDENGIPLDGIPFHPYYSVKDIVGVVVFLFIFALILFYAPEFGGWFLEKDNFIPADPLKTPEHIVPLWYFTPFYAILRAIPSVAGSAFPGVLAMGAAQVLLFLLPWLDR 333
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1154106525|ref|WP_078482489.1| (cytochrome bc complex cytochrome b subunit [Solemya velesiana gill symbiont] >gi|1152924766|gb|OOZ41865.1| cytochrome b [Solemya velesiana gill symbiont]) HSP 1 Score: 517.694 bits (1332), Expect = 2.631e-176 Identity = 251/329 (76.29%), Postives = 293/329 (89.06%), Query Frame = 0 Query: 1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328 + W+D RFPL++ + H+S+Y+APKNFNFWY+FG L+ ++L+IQ+V+GIFLTMNYKPDG AF SVEYIMRDVD+GWLIRY+HSTGAS FF VVYLHMFRGLMYGSY+KPRELIW+FG IY+ALMAEAF GYLLPWGQMSYWGAQVI++LF +P+ +G L+ W+RGDF+VSD TLNRFFAFHVIAVPL+LV LV HI+ALH VGSNNPDGVEIKK+K+A+GIPLDGIPFHPYY+VKD G VFL+VF A+VFFAPEMGGYF+EH NF PA+PLKTPEHIAPVWYFTPFYAMLRA PS+ GSAFPGV VMGAA+V+LFFLPW+DR Sbjct: 8 LGWVDARFPLTKMWREHLSEYYAPKNFNFWYFFGSLALLVLVIQIVSGIFLTMNYKPDGELAFGSVEYIMRDVDWGWLIRYIHSTGASAFFAVVYLHMFRGLMYGSYKKPRELIWIFGCLIYLALMAEAFFGYLLPWGQMSYWGAQVIVNLFAAVPFGLGEPLSLWIRGDFVVSDATLNRFFAFHVIAVPLVLVGLVVAHILALHEVGSNNPDGVEIKKHKDANGIPLDGIPFHPYYSVKDIVGVVVFLMVFAAIVFFAPEMGGYFIEHPNFEPANPLKTPEHIAPVWYFTPFYAMLRAVPSIAGSAFPGVAVMGAAVVILFFLPWLDR 336 The following BLAST results are available for this feature:
BLAST of cytochrome b subunit of cytochrome bc1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2845_size11892:467..3600- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2845_size11892-processed-gene-0.1 ID=snap_masked-scaffold2845_size11892-processed-gene-0.1|Name=cytochrome b subunit of cytochrome bc1|organism=Tigriopus kingsejongensis|type=gene|length=3134bp|location=Sequence derived from alignment at scaffold2845_size11892:467..3600- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cytochrome b subunit of cytochrome bc1' has the following synonyms
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