cytochrome b subunit of cytochrome bc1, snap_masked-scaffold2845_size11892-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Namecytochrome b subunit of cytochrome bc1
Unique Namesnap_masked-scaffold2845_size11892-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|1706225|sp|P51131.1|CYBC_BRADU (RecName: Full=Cytochrome b/c1; Contains: RecName: Full=Cytochrome b; Contains: RecName: Full=Cytochrome c1)

HSP 1 Score: 313.153 bits (801), Expect = 8.024e-96
Identity = 151/327 (46.18%), Postives = 215/327 (65.75%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            + WI+ R P+          Y  P+N N+W+ FG +   ML +Q++TG+ L M+Y P    AF SVE I+RDV+YGWL+R MH+ GAS FF  VY+HM RGL YGSY++PRE++W+ G+ IY+ +MA  FMGY+LPWGQMS+WGA VI +LF+ IP+ G ++   + G + V + TLNRFF+ H + +P ++  +V LH+ ALH  G NNP+GVE K  K       D +PF P+ T+KD FG   FL+++   +F+ P    Y  +  N+IPA+P  TP HI P WY+ PFYA+LR+ P+ +     GV+ M +AI++L FLPW+D
Sbjct:   14 LQWIERRLPILGLMHSSFVAYPTPRNLNYWWTFGAILSFMLGMQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGYSVGNPTLNRFFSLHYL-LPFLIAGVVVLHVWALHVAGQNNPEGVEPKSEK-------DTVPFTPHATIKDMFGVACFLLLYAWFIFYMPN---YLGDADNYIPANPGVTPPHIVPEWYYLPFYAILRSIPNKLA----GVIGMFSAIIILCFLPWLD 325
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|461891|sp|Q02761.2|CYB_RHOSH (RecName: Full=Cytochrome b)

HSP 1 Score: 303.523 bits (776), Expect = 6.815e-95
Identity = 160/347 (46.11%), Postives = 220/347 (63.40%), Query Frame = 0 
Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPS--------------MMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGG 334
            W+  R P+     Y       P+N N+ + +GV+    L++Q+VTGI L M+Y P    AF SVE+IMR+V+ G+++RY+H+ GAS FFI VYLH+FRGL YGSY+ PRE+ W+ GM IY+A+MA AFMGY+LPWGQMS+WGA VI  LF  IP IG ++  W+ G   V + TLNRFF+ H + +P ++ ALV +HI A H  G+NNP GVE+++   A+    D +PF PY+ +KD F   V L+VFFA+V F P     +L H  N+I A+PL TP HI P WYF PFYA+LRA  +              ++ + F GV+ M  AI+V+  +PW+D      G
Sbjct:   18 WLHSRLPIVAL-AYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYL-LPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEA-QKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPN----YLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSG 357
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|117875|sp|P05418.1|CYB_PARDE (RecName: Full=Cytochrome b)

HSP 1 Score: 300.827 bits (769), Expect = 6.022e-94
Identity = 158/348 (45.40%), Postives = 220/348 (63.22%), Query Frame = 0 
Query:    3 WIDDRFPL-SETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHA-NFIPADPLKTPEHIAPVWYFTPFYAMLRATPS--------------MMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGG 334
            W+  R P+ S  Y+  M     PKN N+W+ +G++    L++Q+ TGI L M+Y P    AF SVE+IMRDV+ G+++RY+H+ GAS FF+ VY+H+FRGL YGSY+ PRE+ W+ GM IY+ +M  AFMGY+LPWGQMS+WGA VI  LF  IP +G A+  W+ G   V + TLNRFF+ H + +P ++ ALV +HI A H  G+NNP GVE+++    +    D +PF PY+ +KD F   V L+VFFA+V F P     +L H  N+I A+PL TP HI P WYF PFYA+LRA  +              ++ + F GV+ M  AI+V+  +PW+D      G
Sbjct:   18 WLHRRLPIVSLVYDTLMIP--TPKNLNWWWIWGIVLAFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYL-LPFVIAALVVVHIWAFHTTGNNNPTGVEVRRGSKEEA-KKDTLPFWPYFVIKDLFALAVVLVVFFAIVGFMPN----YLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRAFTADVWVVMLVNWLSFGIIDAKFFGVIAMFGAILVMALVPWLDTSRVRSG 357
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6647479|sp|Q37378.1|CYB_ACACA (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 297.36 bits (760), Expect = 2.590e-93
Identity = 153/329 (46.50%), Postives = 209/329 (63.53%), Query Frame = 0 
Query:    6 DRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRGTAAGG 334
             ++PL       +  Y AP N ++ + FG L+   L IQ+VTGIFL M Y P   +AF+SV+YIMRDV+YGWLIRY+H+ GASFFFI VY+H+FRGL Y SY  PREL+W  G+ I + ++  AF+GY+LPWGQMS+W A VI SLF+ IP +G  +  W+ G F V + TLNRFF+ H + +P ++  L  +H+  LH  GS+NP  + +           + +PFHPY+  KD  G   FLIVF   VFF P+     ++  N +PA+PL TP HI P WYF PFYA+LR+ P+ +G    GV+ +G A++VLF LP+I      G 
Sbjct:    5 KKYPLLNIVNSFLIDYPAPPNISYLWNFGALAAFCLGIQIVTGIFLAMFYVPSIESAFSSVQYIMRDVNYGWLIRYIHANGASFFFICVYIHVFRGLYYNSYITPRELLWNLGVTILIVMILTAFLGYVLPWGQMSFWAATVITSLFSAIPVVGEYIVIWLWGGFSVDNATLNRFFSLHYL-LPFVIALLSLIHVAVLHESGSSNPLNIALSVA--------NKVPFHPYFIFKDLLGIIFFLIVFCYAVFFKPDS---IIDPINNVPANPLVTPTHIVPEWYFLPFYAILRSIPNKLG----GVITLGLALIVLFLLPFITNNVFKGS 317
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|27808646|sp|P42792.2|CYB_ARATH (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 293.893 bits (751), Expect = 5.750e-92
Identity = 156/329 (47.42%), Postives = 206/329 (62.61%), Query Frame = 0 
Query:    1 MTWIDDRF-----PLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLP 324
            MT  + RF     P+S T   H+  Y  P N ++W+ FG L+ + L+IQ+VTG+FL M+Y P    AF SVE+IMRDV+ GWL+RYMH+ GAS FFIVVYLH+FRGL Y SY  PRE +W  G+ I++ ++  AF+GY+LPWGQMS+WGA VI SL + IP +G  +  W+ G F V + TLNRFF+ H + +P ILV    LH+ ALH  GSNNP GV  +         +D I F+PY+ VKD  G   F I F   +F+AP + G+     N+IPA+P+ TP HI P WYF P YA+LR+ P   G    GV  +    + L  LP
Sbjct:    1 MTIRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYL-LPFILVGASLLHLAALHQYGSNNPLGVHSE---------MDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGH---PDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAG----GVAAIALVFICLLALP 312
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|148886838|sp|P0C524.1|CYB_ORYSJ (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 293.123 bits (749), Expect = 1.572e-91
Identity = 156/329 (47.42%), Postives = 205/329 (62.31%), Query Frame = 0 
Query:    1 MTWIDDRF-----PLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLP 324
            MT  + RF     P+  T   H+  Y  P N ++W+ FG L+ + L+IQ+VTG+FL M+Y P    AF SVE+IMRDV+ GWL+RYMH+ GAS FFIVVYLH+FRGL Y SY  PRE +W  G+ I++ ++  AF+GY+LPWGQMS+WGA VI SL + IP +G  +  W+ G F V + TLNRFF+ H + +P ILV    LH+ ALH  GSNNP GV  +         +D I F+PY+ VKD  G   F I F   +FFAP + G+     N+IPA+P+ TP HI P WYF P YA+LR+ P   G    GV  +    + L  LP
Sbjct:    1 MTIRNQRFSLLKQPIYSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYL-LPFILVGASLLHLAALHQYGSNNPLGVHSE---------MDKIAFYPYFYVKDLVGWVAFAIFFSIWIFFAPNVLGH---PDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAG----GVAAIALVFISLLALP 312
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|461886|sp|P26852.2|CYB_MARPO (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 293.123 bits (749), Expect = 1.827e-91
Identity = 153/319 (47.96%), Postives = 203/319 (63.64%), Query Frame = 0 
Query:    9 PLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID 327
            P+  T+  H+  Y  P N ++W+ FG L+ + L+IQ++TG+FL M+Y P    AF SVE+IMRDV  GWL+RYMH+ GAS FFIVVYLH FRGL YGSY  PREL+W  G+ I + ++  AF+GY+LPWGQMS+WGA VI SL + IP +G  +  W+ G F V + TLNRFF+ H + +P I+     LH+ ALH  GSNNP G+            +D I F+PY  VKD  G   F I F   VF+AP + G+     N+IPA+P+ TP HI P WYF P YA+LR+ P+ +G    GV  +G   V L  LP+I+
Sbjct:   11 PIFSTFNNHLIDYPTPSNISYWWGFGSLAGLCLVIQILTGVFLAMHYTPHVDLAFLSVEHIMRDVKGGWLLRYMHANGASMFFIVVYLHFFRGLYYGSYASPRELVWCLGVVILLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYL-LPFIIAGASILHLAALHQYGSNNPLGINSS---------VDKIAFYPYIYVKDLVGWVAFAIFFSIFVFYAPNVLGH---PDNYIPANPMSTPAHIVPEWYFLPVYAILRSIPNKLG----GVAAIGLVFVSLLALPFIN 312
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|85700412|sp|P29757.4|CYB_SOLTU (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 292.352 bits (747), Expect = 2.150e-91
Identity = 151/316 (47.78%), Postives = 201/316 (63.61%), Query Frame = 0 
Query:    9 PLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLP 324
            P+S     H+  Y  P N ++W+ FG L+ + L+IQ+VTG+FL M+Y P    AF SVE+IMRDV+ GWL+RYMH+ GAS FFIVVYLH+FRGL Y SY  PRE +W  G+ I++ ++  AF+GY+LPWGQMS+WGA VI SL + IP +G  +  W+ G F V + TLNRFF+ H + +P ILV    LH+ ALH  GSNNP GV  +         +D I F+PY+ VKD  G   F I F   +F+AP + G+     N+IPA+P+ TP HI P WYF P YA+LR+ P  +G    GV  +    + L  LP
Sbjct:   14 PISSILNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYL-LPFILVGASLLHLAALHQYGSNNPLGVHSE---------MDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGH---PDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKVG----GVAAIALVFICLLALP 312
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|6166074|sp|Q35522.1|CYB_PHYME (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 291.967 bits (746), Expect = 2.467e-91
Identity = 156/319 (48.90%), Postives = 215/319 (67.40%), Query Frame = 0 
Query:   17 HMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWID----RGTA 331
            H+  Y  P N N+++ FG L+ +ML++Q++TGIFL M+Y P    AF SVE+IMRDV+ GWL+RY H+ GASFFFIVVY+H+FRGL YGSY  PRE +W  G+ I++ +MA AFMGY+LPWGQMS+WGA VI +LF+ IP IG  + +W+ G F V + TLNRFF+ H    P ++V  V +H++ LH VGSNNP G+ +K          + IPF+PY+  KD FG  V  +VFF  +F+ P   G+     N+I A+P+KTP HI P WYF PFYA+LR+ P+ +G    GV+ M  +++VL  +P+ +    R TA
Sbjct:   15 HLIDYPTPINLNYFFGFGSLAGIMLVVQILTGIFLAMHYTPHIDLAFNSVEHIMRDVNNGWLMRYTHANGASFFFIVVYVHIFRGLYYGSYITPREALWCSGVIIFILMMATAFMGYVLPWGQMSFWGATVITNLFSAIPLIGKDIVDWLWGGFAVDNPTLNRFFSLH-FTFPFVIVGAVLIHLILLHEVGSNNPLGITLKT---------ENIPFYPYFYTKDLFGLMVLFLVFFIFIFYYPNTLGH---PDNYIEANPMKTPLHIVPEWYFLPFYAILRSIPNKIG----GVIAMFGSLIVLLTIPFTNSSEIRSTA 316
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Match: gi|51338718|sp|P07747.3|CYB_WHEAT (RecName: Full=Cytochrome b; AltName: Full=Complex III subunit 3; AltName: Full=Complex III subunit III; AltName: Full=Cytochrome b-c1 complex subunit 3; AltName: Full=Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

HSP 1 Score: 290.812 bits (743), Expect = 1.041e-90
Identity = 156/329 (47.42%), Postives = 205/329 (62.31%), Query Frame = 0 
Query:    1 MTWIDDRF-----PLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLP 324
            MT  + RF     P+  T   H+  Y  P N ++W+ FG L+ + L+IQ+VTG+FL M+Y P    AF SVE+IMRDV+ GWL+RYMH+ GAS FFIVVYLH+FRGL Y SY  PRE +W  G+ I++ ++  AF+GY+LPWGQMS+WGA VI SL + IP +G  +  W+ G F V + TLNRFF+ H + +P ILV    LH+ ALH  GSNNP GV  +         +D I F+PY+ VKD  G   F I F   +FFAP + G+     N+IPA+P+ TP HI P WYF P YA+LR+ P   G    GV  +    + L  LP
Sbjct:    1 MTIRNQRFSLLKQPIYSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYL-LPFILVGASLLHLAALHQYGSNNPLGVHSE---------MDKIAFYPYFYVKDLVGWVAFAIFFSIWIFFAPNVLGH---PDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAG----GVAAIALVFISLLALP 312
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1088648239|gb|OHE61240.1| (cytochrome B [Thiobacillus sp. GWE1_62_9])

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 252/328 (76.83%), Postives = 296/328 (90.24%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L+IQ+VTGIFLTMNYKPD   AFTSVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDGVEIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A++FFAPEMGGYFLE ANF+PADPLKTPEHIAP+WYFTPFYA+LRA P + GS FPGVV MG +IV LFFLPW+DR
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLTMNYKPDAELAFTSVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGVEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAILFFAPEMGGYFLEAANFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAMGLSIVFLFFLPWLDR 335
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113392310|gb|OJW55283.1| (cytochrome b [Thiobacillus sp. 65-1059] >gi|1113430457|gb|OJW92529.1| cytochrome b [Thiobacillus sp. 65-1402])

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 252/328 (76.83%), Postives = 295/328 (89.94%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L+IQ+VTGIFLTMNYKPD   AFTSVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDGVEIKK+K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NF+PAD LKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IVVLFFLPW+DR
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLTMNYKPDAELAFTSVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGVEIKKHKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADSLKTPAHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGLSIVVLFFLPWLDR 335
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|499631610|ref|WP_011312344.1| (cytochrome b [Thiobacillus denitrificans] >gi|74057345|gb|AAZ97785.1| cytochrome B subunit of cytochrome bc1 [Thiobacillus denitrificans ATCC 25259])

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 249/328 (75.91%), Postives = 295/328 (89.94%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NF+PADPLKTPEHIAP+WYFTPFYA+LRA P + GS FPGVV MG +IV+LFFLPW+DR
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAELAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFAPEMGGYFLEANNFVPADPLKTPEHIAPLWYFTPFYAILRAVPPLFGSQFPGVVAMGMSIVLLFFLPWLDR 335
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1064204594|gb|ODV00410.1| (cytochrome B [Thiobacillus sp. SCN 63-57])

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 294/329 (89.36%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF+ +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFSAVPFIGNDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLESNNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113601228|gb|OJY60382.1| (cytochrome b [Thiobacillus sp. 0-1251])

HSP 1 Score: 540.806 bits (1392), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 294/329 (89.36%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF+ +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFSAVPFIGNDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLESNNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1273663933|gb|PID63297.1| (cytochrome b [Gammaproteobacteria bacterium])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 257/327 (78.59%), Postives = 291/327 (88.99%), Query Frame = 0 
Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID RFP+++T E H+++Y+APKNFNFWYYFG L+ ++L IQ+VTGIFLTMNYKPDG  AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFR L+YGSY+KPREL+W+FGMFIYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+I+SD TLNRFFA HVIAVPL+L+ LV  H++ALH VGSNNPDG+EIK NKNADGIP DGIPFHPYYTVKD  GT VFL VFFA+VFF PEMGGYFLEHANF+PADPLKTPEHIAPVWYFTPFYA+LRA PS +G    GV+ MGAAIVVLFFLPWIDR
Sbjct:   18 WIDQRFPMTKTLEEHITKYYAPKNFNFWYYFGSLAMLVLAIQIVTGIFLTMNYKPDGDLAFKSVEYIMRDVNWGWLIRYMHSTGASMFFLVVYLHMFRALLYGSYKKPRELLWIFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTLWLKGDYIISDATLNRFFALHVIAVPLVLIFLVVAHVLALHEVGSNNPDGIEIKANKNADGIPRDGIPFHPYYTVKDIMGTIVFLFVFFAIVFFMPEMGGYFLEHANFVPADPLKTPEHIAPVWYFTPFYAILRAIPSKLG----GVMFMGAAIVVLFFLPWIDR 340
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1214910738|ref|WP_088920744.1| (cytochrome bc complex cytochrome b subunit [Granulosicoccus antarcticus] >gi|1214627310|gb|ASJ75904.1| Cytochrome b [Granulosicoccus antarcticus IMCC3135])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 256/327 (78.29%), Postives = 291/327 (88.99%), Query Frame = 0 
Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID+RFPL++  E H+++Y+APKNFNFWYYFG L+ ++L+IQLVTGIFLTMNYKPDG  AF+SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPREL+WVFGM IYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+IVSD TLNRFFA HVIAVPL+LV LV  HI+ALH VGSNNPDG++IKKNKNA+G+P DGIPFHPYYTVKD  GT VFLIVFFA+VFFAPEMGGYFLEHANF+PAD  KTPEHIAPVWYFTPFYA+LRA P  +G    GV+ MG AIVVLF +PW+DR
Sbjct:   16 WIDERFPLTKMLEEHITKYYAPKNFNFWYYFGSLAMLVLVIQLVTGIFLTMNYKPDGNLAFSSVEYIMRDVNFGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYKKPRELLWVFGMLIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTIWLKGDYIVSDATLNRFFALHVIAVPLVLVFLVIAHIMALHEVGSNNPDGIDIKKNKNAEGVPKDGIPFHPYYTVKDLMGTVVFLIVFFAIVFFAPEMGGYFLEHANFVPADQFKTPEHIAPVWYFTPFYAILRAVPDKLG----GVIAMGGAIVVLFLVPWLDR 338
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|517330955|ref|WP_018506447.1| (cytochrome b [Thiobacillus thioparus])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 248/329 (75.38%), Postives = 293/329 (89.06%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M W+DDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD   AF SVEYIMRDVD+GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMSYWGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+A+GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFF P MGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV++FFLPW+DRG
Sbjct:    8 MGWVDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVMQIVTGIFLTMNYKPDSMLAFASVEYIMRDVDWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSYWGAQVIVNLFAAVPFIGDDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDANGIPLDGIPFHPYYTVKDIVGVIVFLMVFSAIVFFGPTMGGYFLEANNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGMSIVLIFFLPWLDRG 336
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1273742632|gb|PIE35483.1| (cytochrome b [Gammaproteobacteria bacterium])

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 256/327 (78.29%), Postives = 290/327 (88.69%), Query Frame = 0 
Query:    3 WIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPW-IGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNADGIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDR 328
            WID RFP+++T E H+++Y+APKNFNFWYYFG L+ ++L IQ+VTGI LTMNYKPDG  AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFR L+YGSY+KPREL+W+FGMFIYVALMAEAFMGYLLPWGQMSYWGAQVI+SLF  IP+ IG ALT W++GD+I+SD TLNRFFA HVIAVPL+L+ LV  H++ALH VGSNNPDG+EIK NKNADGIP DGIPFHPYYTVKD  GT VFL VFFA+VFF PEMGGYFLEHANF+PADPLKTPEHIAPVWYFTPFYA+LRA PS +G    GV+ MGAAIVVLFFLPWIDR
Sbjct:   18 WIDQRFPMTKTLEEHITKYYAPKNFNFWYYFGSLAMLVLAIQIVTGIILTMNYKPDGDLAFKSVEYIMRDVNWGWLIRYMHSTGASMFFLVVYLHMFRALLYGSYKKPRELLWIFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPFGIGDALTLWLKGDYIISDATLNRFFALHVIAVPLVLIFLVVAHVLALHEVGSNNPDGIEIKANKNADGIPRDGIPFHPYYTVKDIMGTIVFLFVFFAIVFFMPEMGGYFLEHANFVPADPLKTPEHIAPVWYFTPFYAILRAIPSKLG----GVMFMGAAIVVLFFLPWIDR 340
[Close]
BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Match: gi|1113658232|gb|OJZ16754.1| (cytochrome b [Thiobacillus sp. 65-29])

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 249/330 (75.45%), Postives = 294/330 (89.09%), Query Frame = 0 
Query:    1 MTWIDDRFPLSETYEYHMSQYWAPKNFNFWYYFGVLSFVMLIIQLVTGIFLTMNYKPDGAAAFTSVEYIMRDVDYGWLIRYMHSTGASFFFIVVYLHMFRGLMYGSYQKPRELIWVFGMFIYVALMAEAFMGYLLPWGQMSYWGAQVILSLFNTIPWIGPALTEWVRGDFIVSDITLNRFFAFHVIAVPLILVALVFLHIVALHHVGSNNPDGVEIKKNKNAD-GIPLDGIPFHPYYTVKDTFGTGVFLIVFFAVVFFAPEMGGYFLEHANFIPADPLKTPEHIAPVWYFTPFYAMLRATPSMMGSAFPGVVVMGAAIVVLFFLPWIDRG 329
            M WIDDRFPL+ TY+ H+S+Y+APKNFNFWY+FG L+ ++L++Q+VTGIFLTMNYKPD A AF SVEYIMRDV++GWLIRYMHSTGAS FF+VVYLHMFRGLMYGSY+KPRELIW+FG+ IY+ALMAEAF+GYLLPWGQMS+WGAQVI++LF  +P+IG  L+ W+RGD+++SD TLNRFFAFHVIA+PL+L+ALV +H+VALH VGSNNPDG+EIKK K+ + GIPLDGIPFHPYYTVKD  G  VFL+VF A+VFFAPEMGGYFLE  NFIPADPLKTP HIAP+WYFTPFYA+LRA P M GS FPGVV MG +IV+LFFLPW+DR 
Sbjct:    8 MGWIDDRFPLTATYKAHLSEYYAPKNFNFWYFFGSLALLVLVLQIVTGIFLTMNYKPDAALAFASVEYIMRDVEWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELIWIFGVLIYLALMAEAFLGYLLPWGQMSFWGAQVIVNLFAAVPFIGEDLSIWIRGDYVISDATLNRFFAFHVIALPLVLIALVAVHLVALHEVGSNNPDGIEIKKKKDPNTGIPLDGIPFHPYYTVKDIVGVVVFLMVFSAIVFFAPEMGGYFLEANNFIPADPLKTPPHIAPLWYFTPFYAILRAVPPMFGSQFPGVVAMGLSIVLLFFLPWLDRA 337
The following BLAST results are available for this feature:
BLAST of cytochrome b subunit of cytochrome bc1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of cytochrome b subunit of cytochrome bc1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1706225|sp|P51131.1|CYBC_BRADU8.024e-9646.18RecName: Full=Cytochrome b/c1; Contains: RecName: ... [more]
gi|461891|sp|Q02761.2|CYB_RHOSH6.815e-9546.11RecName: Full=Cytochrome b[more]
gi|117875|sp|P05418.1|CYB_PARDE6.022e-9445.40RecName: Full=Cytochrome b[more]
gi|6647479|sp|Q37378.1|CYB_ACACA2.590e-9346.50RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|27808646|sp|P42792.2|CYB_ARATH5.750e-9247.42RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|148886838|sp|P0C524.1|CYB_ORYSJ1.572e-9147.42RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|461886|sp|P26852.2|CYB_MARPO1.827e-9147.96RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|85700412|sp|P29757.4|CYB_SOLTU2.150e-9147.78RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|6166074|sp|Q35522.1|CYB_PHYME2.467e-9148.90RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]
gi|51338718|sp|P07747.3|CYB_WHEAT1.041e-9047.42RecName: Full=Cytochrome b; AltName: Full=Complex ... [more]

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BLAST of cytochrome b subunit of cytochrome bc1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1088648239|gb|OHE61240.1|0.000e+076.83cytochrome B [Thiobacillus sp. GWE1_62_9][more]
gi|1113392310|gb|OJW55283.1|0.000e+076.83cytochrome b [Thiobacillus sp. 65-1059] >gi|111343... [more]
gi|499631610|ref|WP_011312344.1|0.000e+075.91cytochrome b [Thiobacillus denitrificans] >gi|7405... [more]
gi|1064204594|gb|ODV00410.1|0.000e+075.38cytochrome B [Thiobacillus sp. SCN 63-57][more]
gi|1113601228|gb|OJY60382.1|0.000e+075.38cytochrome b [Thiobacillus sp. 0-1251][more]
gi|1273663933|gb|PID63297.1|0.000e+078.59cytochrome b [Gammaproteobacteria bacterium][more]
gi|1214910738|ref|WP_088920744.1|0.000e+078.29cytochrome bc complex cytochrome b subunit [Granul... [more]
gi|517330955|ref|WP_018506447.1|0.000e+075.38cytochrome b [Thiobacillus thioparus][more]
gi|1273742632|gb|PIE35483.1|0.000e+078.29cytochrome b [Gammaproteobacteria bacterium][more]
gi|1113658232|gb|OJZ16754.1|0.000e+075.45cytochrome b [Thiobacillus sp. 65-29][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2845_size11892supercontigscaffold2845_size11892:467..3600 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:respiratory electron transport chain
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2845_size11892-processed-gene-0.1-mRNA-1snap_masked-scaffold2845_size11892-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold2845_size11892:467..3600-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2845_size11892-processed-gene-0.1 ID=snap_masked-scaffold2845_size11892-processed-gene-0.1|Name=cytochrome b subunit of cytochrome bc1|organism=Tigriopus kingsejongensis|type=gene|length=3134bp|location=Sequence derived from alignment at scaffold2845_size11892:467..3600- (Tigriopus kingsejongensis)
ATGACATGGATTGACGACCGGTTCCCGCTCTCGGAAACCTACGAATATCA
CATGTCCCAGTACTGGGCGCCGAAGAATTTCAACTTCTGGTATTACTTTG
GTGTCTTGTCCTTTGTCATGTTGATCATTCAATTGGTCACGGGCATCTTC
CTCACCATGAACTACAAACCCGATGGCGCTGCGGCGTTTACCTCGGTTGA
GTACATCATGCGGGATGTGGACTACGGTTGGTTGATTCGCTACATGCACT
CAACGGGCGCGTCCTTCTTCTTTATCGTCGTCTATCTGCACATGTTCCGC
GGACTAATGTACGGCTCTTACCAAAAGCCCCGTGAGTTGATCTGGGTGTT
TGGTATGTTTATCTATGTGGCACTGATGGCAGAGGCCTTCATGGGTTACT
TGCTGCCTTGGGGCCAGATGTCCTACTGGGGTGCGCAGGTTATCTTGTCG
CTGTTCAACACCATTCCATGGATCGGTCCTGCACTGACCGAATGGGTGCG
TGGTGACTTTATCGTCTCGGATATCACGCTGAACCGCTTCTTTGCGTTCC
ACGTCATCGCTGTGCCGCTGATTTTGGTTGCCTTGGTGTTCTTGCACATT
GTTGCGCTACATCACGTGGGTTCAAACAACCCTGACGGTGTTGAAATCAA
GAAAAACAAAAATGCAGACGGCATTCCGTTGGACGGTATCCCGTTCCACC
CGTACTACACAGTTAAAGATACCTTTGGTACTGGTGTGTTCTTAATCGTC
TTCTTTGCGGTGGTGTTCTTTGCTCCTGAGATGGGTGGCTACTTCCTAGA
ACACGCGAACTTTATCCCTGCCGATCCACTTAAAACGCCTGAGCACATTG
CGCCGGTTTGGTACTTCACGCCTTTCTACGCCATGTTACGTGCGACACCA
TCCATGATGGGTTCAGCATTCCCGGGTGTTGTGGTGATGGGCGCAGCTAT
TGTGGTGCTGTTCTTCTTGCCTTGGATTGATCGCGGTACGGTGCGTTCTA
TCCGCTATCGTTGCACCGCGTTTAAAGTGAACTTGTTCATGTTGGCGCTC
GCTTTTGTTGTGCTGGGTTATTACGGCATGCAAGCACCAACTGATCTCGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTGTTTATTTTGGTTACTTCATCGCGCTGTTTATCATCAGTAAA
AATGAAAACACCAAGCCTGTACCAGAGAGGGTGACTCACTAATGTTGGGA
CGTAAACTTATCGTTGCCGCTGTCGCCTGTTTTGCCTGTATTTGCGCAGG
CTGCAGGTGGGGGTGGGCATATCGAGACTGTGCATATTCAACCTGACAAC
AAAGCCTCGCTACAGCGCGGCGCACGTACCTACGTCAACTACTGCATCGG
CTGTCATAGCTTGAAGTATCTGCGTTACAACCGCATGGCAGAAGACCTAG
GGTTGCCGGCTGACATTGTTGAAGACAACTTGATCTTCACCAGCAATGAA
GACGGTGAGCACCACAAAGTGACGGACATGATGCACAGTTCGATGACCAC
TGAATACGCCAAAGGCGCGTTCGGTGTGGCGCCGCCTGATTTGTCTCTGA
TCGCTCGTTCACGTGGTATTGACTGGCTCTATACCTATTTGACGACTTTC
CACATTGATGAGTCGCGCACCGGTACTGGCCATAACAACTTGGCTTTCCC
CGATGTGGGCATGCCTAACGTGATGTGGGAGTTGCAGGGTTTGCAACGTG
CGGTTTACACCGAGACTGATGATGGTCACGGTGAGACGCATAAGGTCTTT
GAAGGCTTTGAGCAGGTTACTGAAGGTAGCTTGTCTGCGGCAGAATATGA
CAAAGTTGCGCGAGATCTGGTAAATTTCCTTCATTATGCTGCGGAGCCAG
GACGGGCTCAGCGTATCAGTATGGGTATTTGGGTGATGTTGTTCTTGTTT
GTATTTACAGCAGGCGCCTATGTACTGAAGAAGGAGTGGTGGCGCGACGT
GCGCTAAAACTGCCTTTTCTCGAGGCTGGGACGGGTATCTCTCGAGTGCC
CGTCCTTCTTCGTTTGTAGTAATGCTGTTTTCTGCAAAGTATTTAGACTT
TGCGGGTTCTATTTGCTGATAGAGAGCGTGATTGCTCGGCTGTCGGCCTA
CTTGGAGTAAATCGTGACTGCCATTGCCCGTAGATCGGTAATGACGCTGT
TTTCAGTACCTAGTGACATGCACAGCCATCGGGTGCGTGTCGTGTTGTCA
GAGAAAGACATCGTTGTTGAAGTTGAAGACGTTGATCCAGATTATTTGCC
AGAGGATCTGCAGCACCTGAACCCCTATAACACCGTGCCCACACTCGTTG
ATCGGGACTTGGTGCTTTATGACTCACGCGTTATCGCTGAGTATTTGGAC
GAGCGTTTCCCGCACCCGCCGCTGATGCCGGTTGATCCCGTTTCACGTGC
GCGCACGCGATTGGCTTTGTATCGAGTTGAAAACGACTGGTATCCGCTGG
CGCACACACTGGAAAACGGTAGCGAGAAAAAACGCACCGAGGCGCGTAAA
TTGATGCGCGAAAGCCTTGTGGCTTCTGCGGAAATTTTTGAGCTCAAGCC
GTTCTTTTTGTCTGATGAATTCTCGCTTGTGGATGCCACAATTGCGCCGC
TGCTGTGGCGCTTGCCAAAGTATGGCGTGGATTTGCCAAAAGAGACCAAG
CCCATCCAGGACTATGCCGAGCGCATGTTTAAGCGTTCGGGTTTTGTTGA
TAGTTTGACCGAAGTAGAGCGTGAGATGCGTTAA
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Synonyms
The feature 'cytochrome b subunit of cytochrome bc1' has the following synonyms
Synonym
Tk03588
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