vax1 transcription, snap_masked-scaffold295_size218279-processed-gene-1.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000007689 (supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-1 gene:EMLSAG00000007689 transcript:EMLSAT00000007689 description:"maker-LSalAtl2s447-snap-gene-4.59") HSP 1 Score: 164.851 bits (416), Expect = 1.995e-53 Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0 Query: 28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG-IPPTPYSPSFCTECYYKPGSCGSLHQGSLIP 127 TTFTSDQTLRLE+EYQRNEYISRPRRFELAE LDLTETQIKIWFQNRRAKDKR EKA ID QYR +AFG +PP+ YS C++CYYKPGSCG +H+G+ +P Sbjct: 17 TTFTSDQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKRXEKAHIDQQYRYIAFGSVPPSSYS-LLCSDCYYKPGSCGPIHRGTPLP 116
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000007002 (supercontig:LSalAtl2s:LSalAtl2s398:241587:243741:1 gene:EMLSAG00000007002 transcript:EMLSAT00000007002 description:"maker-LSalAtl2s398-snap-gene-2.6") HSP 1 Score: 75.485 bits (184), Expect = 4.347e-17 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0 Query: 18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQID 87 RK R+ RT FTS Q + LE +Y+ +Y+S R E + L +TETQ+KIWFQNRRAK KR+++A++D Sbjct: 224 RKHRADRKPRTPFTSQQLMELENKYKEKQYLSISERAEFSAKLKITETQVKIWFQNRRAKTKRLQEAELD 293 HSP 2 Score: 67.0106 bits (162), Expect = 4.946e-14 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQID 87 RK R+ RT FT+ Q LE ++ + +Y+S E + +L LTETQ+KIWFQNRRAK KRI++++++ Sbjct: 128 RKHKPDRKPRTPFTNSQLAALEKKFSQKQYLSISEXAEFSCSLKLTETQVKIWFQNRRAKSKRIQESEME 197
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000005186 (supercontig:LSalAtl2s:LSalAtl2s273:538220:539897:1 gene:EMLSAG00000005186 transcript:EMLSAT00000005186 description:"maker-LSalAtl2s273-snap-gene-5.22") HSP 1 Score: 71.2478 bits (173), Expect = 7.312e-17 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0 Query: 20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 + R++R RT FT+ Q LE E++RN+Y+S +R L++ L+LTETQIKIWFQNRR K KR Sbjct: 33 EDRKKRPRTAFTASQIKALETEFERNKYLSVSKRLFLSKNLNLTETQIKIWFQNRRTKWKR 93
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000002737 (supercontig:LSalAtl2s:LSalAtl2s158:121922:135190:-1 gene:EMLSAG00000002737 transcript:EMLSAT00000002737 description:"maker-LSalAtl2s158-augustus-gene-1.14") HSP 1 Score: 73.9442 bits (180), Expect = 2.176e-16 Identity = 37/84 (44.05%), Postives = 47/84 (55.95%), Query Frame = 0 Query: 27 RTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTEC 110 RT FT+ Q LE E+ N+Y++R RR E+A AL L ETQ+KIWFQNRR K K+ K + P+ PS EC Sbjct: 377 RTNFTTKQLTELEKEFHFNKYLTRARRIEIAGALQLNETQVKIWFQNRRMKQKKRMKEGL-------------IPHDPSLTGEC 447
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000000557 (supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-1 gene:EMLSAG00000000557 transcript:EMLSAT00000000557 description:"snap_masked-LSalAtl2s108-processed-gene-6.6") HSP 1 Score: 69.707 bits (169), Expect = 2.531e-16 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEK 83 +RQRT++T QTL LE E+ N Y++R RR E+A AL LTE QIKIWFQ RR K K+ K Sbjct: 11 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQXRRMKWKKEHK 70
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004821 (supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-1 gene:EMLSAG00000004821 transcript:EMLSAT00000004821 description:"maker-LSalAtl2s254-augustus-gene-3.28") HSP 1 Score: 72.4034 bits (176), Expect = 5.910e-16 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 RR RT FT +Q RLE E+ + YISRP+R ELA L+L E IK+WFQNRR KDKR Sbjct: 134 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 190
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004365 (supercontig:LSalAtl2s:LSalAtl2s229:92164:93864:1 gene:EMLSAG00000004365 transcript:EMLSAT00000004365 description:"maker-LSalAtl2s229-augustus-gene-1.9") HSP 1 Score: 70.0922 bits (170), Expect = 2.156e-15 Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0 Query: 20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIE 82 +++ RR+RT FTS+Q L LE E+ +Y+S R +A L L+E Q+KIWFQNRRAK KR++ Sbjct: 179 NSKSRRRRTAFTSEQLLELEKEFHSKKYLSLSERSSIAHNLRLSEVQVKIWFQNRRAKWKRVK 241
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000009086 (supercontig:LSalAtl2s:LSalAtl2s570:267122:268618:-1 gene:EMLSAG00000009086 transcript:EMLSAT00000009086 description:"augustus_masked-LSalAtl2s570-processed-gene-1.5") HSP 1 Score: 70.0922 bits (170), Expect = 3.122e-15 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPY 102 RK R+ RT FT+ Q LE ++++ +Y+S R E + +L LTETQ+KIWFQNRRAK KR+++++++ + R + + P PY Sbjct: 192 RKHKPXRKPRTPFTTQQLSALEKKFRQKQYLSIAERAEFSASLKLTETQVKIWFQNRRAKSKRLQESELE-RLRIASSPLLPRPY 275
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000010592 (supercontig:LSalAtl2s:LSalAtl2s704:428566:452407:-1 gene:EMLSAG00000010592 transcript:EMLSAT00000010592 description:"maker-LSalAtl2s704-augustus-gene-4.20") HSP 1 Score: 67.781 bits (164), Expect = 3.274e-15 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0 Query: 22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAK 77 R +R RT FT DQ R+E E+Q+ +Y+ P R LA +L+LTE Q+K+WFQNRR K Sbjct: 76 RNKRARTIFTPDQLERMEQEFQKQQYVVGPERLYLAASLNLTEAQVKVWFQNRRIK 131
BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004485 (supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 gene:EMLSAG00000004485 transcript:EMLSAT00000004485 description:"augustus_masked-LSalAtl2s233-processed-gene-1.0") HSP 1 Score: 69.707 bits (169), Expect = 4.568e-15 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 + +RR R T+T QTL LE E+ N Y++R RR E+A L LTE QIKIWFQNRR K K+ Sbjct: 222 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKK 282
BLAST of vax1 transcription vs. SwissProt
Match: gi|261260077|sp|P18264.2|ROUGH_DROVI (RecName: Full=Homeobox protein rough) HSP 1 Score: 113.62 bits (283), Expect = 8.810e-30 Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0 Query: 28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG 96 TTF+++QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID YR Sbjct: 169 TTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLSETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVA 237
BLAST of vax1 transcription vs. SwissProt
Match: gi|14286139|sp|P10181.4|ROUGH_DROME (RecName: Full=Homeobox protein rough) HSP 1 Score: 113.62 bits (283), Expect = 1.082e-29 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0 Query: 28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG 96 TTF+++QTLRLE+E+ RNEYISR RRFELAE L LTETQIKIWFQNRRAKDKRIEKAQID YR Sbjct: 196 TTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVA 264
BLAST of vax1 transcription vs. SwissProt
Match: gi|259016336|sp|P50219.3|MNX1_HUMAN (RecName: Full=Motor neuron and pancreas homeobox protein 1; AltName: Full=Homeobox protein HB9) HSP 1 Score: 83.9593 bits (206), Expect = 1.609e-18 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQ 85 RR RT FTS Q L LE +++ N+Y+SRP+RFE+A +L LTETQ+KIWFQNRR K KR +KA+ Sbjct: 242 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAK 303
BLAST of vax1 transcription vs. SwissProt
Match: gi|341940962|sp|Q9QZW9.2|MNX1_MOUSE (RecName: Full=Motor neuron and pancreas homeobox protein 1; AltName: Full=Homeobox protein HB9) HSP 1 Score: 83.5741 bits (205), Expect = 2.503e-18 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQ 85 RR RT FTS Q L LE +++ N+Y+SRP+RFE+A +L LTETQ+KIWFQNRR K KR +KA+ Sbjct: 242 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAK 303
BLAST of vax1 transcription vs. SwissProt
Match: gi|12231013|sp|Q03828.2|EVX2_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 83.5741 bits (205), Expect = 2.748e-18 Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120 RR RT FT +Q RLE E+ R Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR Q +++ P P PSF T + GSL Sbjct: 189 RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 274
BLAST of vax1 transcription vs. SwissProt
Match: gi|1706722|sp|P49749.1|EVX2_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 83.5741 bits (205), Expect = 2.824e-18 Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120 RR RT FT +Q RLE E+ R Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR Q +++ P P PSF T + GSL Sbjct: 192 RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 277
BLAST of vax1 transcription vs. SwissProt
Match: gi|21903413|sp|P17487.2|HM12_CAEEL (RecName: Full=Homeobox protein ceh-12) HSP 1 Score: 79.337 bits (194), Expect = 5.408e-18 Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0 Query: 21 ARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 + RR RT F+S+Q ++LE ++ N Y+SRPRR++LA+ L L+ETQIKIWFQNRR K+KR Sbjct: 108 GKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167
BLAST of vax1 transcription vs. SwissProt
Match: gi|1352398|sp|P49640.1|EVX1_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1) HSP 1 Score: 82.0333 bits (201), Expect = 7.397e-18 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0 Query: 22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 + RR RT FT +Q RLE E+ R Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR Sbjct: 182 QMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 240
BLAST of vax1 transcription vs. SwissProt
Match: gi|14916562|sp|Q9IA18.1|EVX2_HETFR (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 82.0333 bits (201), Expect = 9.076e-18 Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120 RR RT FT +Q RLE E+ R Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR Q +++ P P PSF T + GSL Sbjct: 180 RRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 265
BLAST of vax1 transcription vs. SwissProt
Match: gi|119664|sp|P23683.1|EVX1_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1) HSP 1 Score: 82.0333 bits (201), Expect = 9.443e-18 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0 Query: 22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80 + RR RT FT +Q RLE E+ R Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR Sbjct: 182 QMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 240
BLAST of vax1 transcription vs. nr
Match: gi|383855364|ref|XP_003703183.1| (PREDICTED: homeobox protein rough [Megachile rotundata] >gi|805785100|ref|XP_012140265.1| PREDICTED: homeobox protein rough [Megachile rotundata]) HSP 1 Score: 139.043 bits (349), Expect = 3.034e-37 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPYSP--SFCTECYYKPGSCGSLHQGSLIPSPL 130 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P FC C+YK +++ + +P+ Sbjct: 156 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLQLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAVSNGVLNLPIDSRNGFCELCFYKKAFGSTVNHSCVSMNPV 277
BLAST of vax1 transcription vs. nr
Match: gi|668455883|gb|KFB44109.1| (AGAP002372-PA-like protein [Anopheles sinensis]) HSP 1 Score: 140.198 bits (352), Expect = 4.743e-37 Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPYSPSF 106 +ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR A G+ TP+SP F Sbjct: 211 LARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIKIWFQNRRAKDKRIEKAQIDQQYRTFAAVNGL-LTPFSPQF 305
BLAST of vax1 transcription vs. nr
Match: gi|1059227281|ref|XP_017759152.1| (PREDICTED: homeobox protein rough [Eufriesea mexicana] >gi|1026566710|gb|OAD55808.1| Homeobox protein rough [Eufriesea mexicana]) HSP 1 Score: 138.272 bits (347), Expect = 5.690e-37 Identity = 73/131 (55.73%), Postives = 89/131 (67.94%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPY--SPSFCTECYYKPGSCGSLHQGSLIPSPLASSNLGPPE 139 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P FC C+YK + + SP+ + L P+ Sbjct: 161 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISSGMINLPIYGRNGFCEFCFYKKTFGSAANHSCTSMSPITGTFLKQPQ 291
BLAST of vax1 transcription vs. nr
Match: gi|820861336|ref|XP_012347458.1| (PREDICTED: homeobox protein rough isoform X1 [Apis florea]) HSP 1 Score: 137.502 bits (345), Expect = 1.019e-36 Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPYS-PSFCTECYYK-------PGSCGSLH 121 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A GI Y FC C+YK SC S++ Sbjct: 159 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISNGINLPIYGRNGFCEFCFYKKTFGSTTSHSCASMN 277
BLAST of vax1 transcription vs. nr
Match: gi|1218218716|ref|XP_021712998.1| (homeobox protein rough [Aedes aegypti]) HSP 1 Score: 136.732 bits (343), Expect = 1.535e-36 Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLA 94 +ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR A Sbjct: 172 LARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEILKLSETQIKIWFQNRRAKDKRIEKAQIDQQYRAFA 253
BLAST of vax1 transcription vs. nr
Match: gi|350401812|ref|XP_003486269.1| (homeobox protein rough [Bombus impatiens]) HSP 1 Score: 136.346 bits (342), Expect = 3.083e-36 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTP-YSPS-FCTECYYK 113 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P Y S FC C+YK Sbjct: 162 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISSGMINLPIYGRSGFCEFCFYK 266
BLAST of vax1 transcription vs. nr
Match: gi|1035587224|ref|XP_016909290.1| (PREDICTED: homeobox protein rough-like [Apis cerana] >gi|1241828567|gb|PBC25127.1| Homeobox protein rough [Apis cerana cerana]) HSP 1 Score: 136.346 bits (342), Expect = 3.120e-36 Identity = 72/120 (60.00%), Postives = 85/120 (70.83%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPY--SPSFCTECYYK-------PGSCGSLH 121 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P FC C+YK SC S++ Sbjct: 162 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISNGMINLPIYGRNGFCEFCFYKKTFGSTNSHSCASMN 281
BLAST of vax1 transcription vs. nr
Match: gi|108873324|gb|EAT37549.1| (AAEL010463-PA [Aedes aegypti]) HSP 1 Score: 130.568 bits (327), Expect = 3.505e-36 Identity = 64/79 (81.01%), Postives = 72/79 (91.14%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYR 91 +ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR Sbjct: 31 VARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEILKLSETQIKIWFQNRRAKDKRIEKAQIDQQYR 109
BLAST of vax1 transcription vs. nr
Match: gi|328777191|ref|XP_003249297.1| (PREDICTED: homeobox protein rough-like isoform X1 [Apis mellifera]) HSP 1 Score: 136.346 bits (342), Expect = 3.624e-36 Identity = 72/120 (60.00%), Postives = 85/120 (70.83%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTPY--SPSFCTECYYKP-------GSCGSLH 121 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P FC C+YK SC S++ Sbjct: 162 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISNGMINLPIYGRNGFCEFCFYKKTFGSTTNHSCASMN 281
BLAST of vax1 transcription vs. nr
Match: gi|340718574|ref|XP_003397740.1| (homeobox protein rough isoform X1 [Bombus terrestris]) HSP 1 Score: 135.961 bits (341), Expect = 3.698e-36 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0 Query: 13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTP-YSPS-FCTECYYK 113 +AR+RRK+ R RRQRTTF+ +QTLRLE+EY+R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D YR A G+ P Y S FC C+YK Sbjct: 162 LARKRRKEGRPRRQRTTFSGEQTLRLEVEYRRGEYISRGRRFELATSLHLTETQIKIWFQNRRAKDKRIEKAQLDQYYRNFAISSGMINLPIYGRSGFCEFCFYK 266 The following BLAST results are available for this feature:
BLAST of vax1 transcription vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of vax1 transcription vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of vax1 transcription vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold295_size218279:140771..143561- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold295_size218279-processed-gene-1.11 ID=snap_masked-scaffold295_size218279-processed-gene-1.11|Name=vax1 transcription|organism=Tigriopus kingsejongensis|type=gene|length=2791bp|location=Sequence derived from alignment at scaffold295_size218279:140771..143561- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vax1 transcription' has the following synonyms
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