rna helicase, snap_masked-scaffold2_size2283618-processed-gene-10.6 (gene) Tigriopus kingsejongensis

Overview


Name	rna helicase
Unique Name	snap_masked-scaffold2_size2283618-processed-gene-10.6
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 240.736 bits (613), Expect = 1.095e-74
Identity = 147/362 (40.61%), Postives = 212/362 (58.56%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRA----LVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDS--KVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKE--QAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGTPELVSSGIDKGF 356
             S+LG     LK  K+  +  PTPIQ    PV+ SG+D+I  A+TG+GKT AF +P L    ++ +   K V +    L++APTRELA+Q +  + +  + +   SL VYGGV+   Q Q L  GV+ILVATPGRLLDLA +  V    +  +V+DEADRMLD GF +DI +I+ +    RQ  LFSAT  D +R+    F  S  KV+  + +++A  T      + Q +  VD+ ++   +  L+ +  +  ++ LIF+  K  A +L + L K +    +IHGD+SQ  R + + +FKSGK+  L+AT VAARG+DI  +  V+NY  P   +DY+HRIGRTGRAG      SGI   F
Sbjct:  114 MSSLG--KKCLKCCKS--FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKT------VTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAG-----KSGIAHTF 459

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 240.736 bits (613), Expect = 1.690e-73
Identity = 151/387 (39.02%), Postives = 218/387 (56.33%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELR----GKSVR------ALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKII--DRLPTA--RQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDK-DTKSALL-----SHLIKEQAWDQ----ALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGTPELVSSGI-DKGFGAARDILE 364
            F ++ + + +   +K   Y+ PTP+QK AIP I +G+DL+A AQTG+GKTAAF++PIL    + G  +     K+ R      AL+LAPTRELA Q+      +A    +    VYGG +   QM  L  G  +LVATPGRL+D+  +  +  ++ + LV+DEADRMLDMGF   I KI+  D +P A  RQ L+FSAT   +++     F  + +      + +T     +  I Q ++ VD+ D +S LL     + L K  A ++     L+F+E +  A +L   L K      SIHGDR+Q  RE  L  F+SG    LVAT VAARG+DI  +  V+N+DLP   ++Y+HRIGRTGR G   L +S   D+     +D++E
Sbjct:  182 FMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGST-----SENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDLVE 563

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 237.654 bits (605), Expect = 1.087e-72
Identity = 155/401 (38.65%), Postives = 217/401 (54.11%), Query Frame = 0

Query:    2 PFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKS----VRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEG-VDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDR--LP--TARQNLLFSATMNDDVREFVSHF-SDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWD---QALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGTPELVSSGIDKGFGA--ARDILEGLSVLEGSIAEDISKTYDLVQQG 387
            PF+++ L D I +      YT PTP+QK A+P+IL   DLI+ AQTG+GKTA F+LPI+     K      S     R L+L PTREL +Q+      Y   +++    +YGG  +E     L+   VDIL ATPGRL+D+  +  + F+ +E LVIDEADRML+MGF   ID++++   +P  T RQ LLFSAT   +++   S +  D    ++ V         A+  I+Q ++ V    K   L   +KE   +   + LIF  KK     L ++L      A SIHGDR Q  RE+ L DFK G    LVAT VA+RG+DI K+S V+NYDLP     Y+HRIGR+GR G      S  +  F    A+D++  L   +  + E + K  D+   G
Sbjct:  170 PFTSI-LQDNIARC----SYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEIQILASEYLKDYLFLKVGV------VGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVLKEAKQHVPEWLEKQGDVYYGG 559

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 229.18 bits (583), Expect = 2.068e-70
Identity = 136/335 (40.60%), Postives = 192/335 (57.31%), Query Frame = 0

Query:   13 LKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGK--SVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKS--ALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            + A++ +G+  P+PIQ QA P +L G DLI  AQTGTGKT AF+LP       +   R K      LVL+PTRELA+Q+   V  Y E+  + S+ VYGG D + Q++ + +GV I++ATPGRL DL     +  + +  LV+DEADRMLDMGF   I KI+  +   RQ ++ SAT    VR   S++       I V I +     A   + Q +  V+ + +    LL         D+A+IF+ KK       S L    ++  SIHG R Q  RE+ L DFK G ++ L+AT VA+RGID+  +S V+N+D P   ++Y+HRIGR+GRAG
Sbjct:    1 MTAIQKRGFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKY-EYRGIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKD---PITVSIGSLDLA-AVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAG 330

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33")

HSP 1 Score: 232.261 bits (591), Expect = 4.346e-69
Identity = 136/343 (39.65%), Postives = 191/343 (55.69%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELR-GKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKE---QAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGR 341
            F+  G  D ILK  K QG+  PT IQ Q  P+ LSG +++  A TG+GKT  ++LP +    ++  L  G     LVLAPTRELA Q++   + +     + S  ++GG    PQ++ L  G +I++ATPGRL+D+     +       LV+DEADRMLDMGF   I KII+++   RQ L++SAT   +VR     F D  V    + I A  T  A   I Q +   +   K   L+ L++E   +  ++ LIF+E K  A +L   + +    A  IHGD+ Q  R+ VL +FK G    L AT VAARG+D+  +  V+NYD P   +DYIHRIGRTGR
Sbjct:  117 FTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTRELAQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVH---INIGAA-TLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGR 455

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30")

HSP 1 Score: 225.713 bits (574), Expect = 5.577e-67
Identity = 129/351 (36.75%), Postives = 194/351 (55.27%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPIL-EMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTK-------KAAPGIDQWLITVDKD--TKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F + G  + +LK+++   +T PTPIQ   IPV LSG+D I  A+TG+GKTA F+ PI+  +   +  L G+   AL+L PTRELA+Q+      + +  DL+++  YGG     Q +    G +I +ATPGR++D+   +      +  LV+DEADRM DMGF   +  I D +   RQ LLFSAT               KV ++A ++   P K       +A+  + Q +  ++K       +L +L++  +    LIF+ KK +  +L   L  ++ E + IHGD +Q VR +++  FK  +   LVAT VAARG+DI  +  V+NYD+    D + HRIGRTGRAG
Sbjct:  278 FGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFK------------KKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAG 616

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 223.016 bits (567), Expect = 2.294e-65
Identity = 127/349 (36.39%), Postives = 198/349 (56.73%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELR-GKSVRALVLAPTRELAIQVEANVAAYAEHLD-LSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDL---AYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQ-ALIFIEKKHSAAKLVSQLAKRD-IEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGT 344
            +++ G+   IL  +K  GY  PTPIQ QAIP+I+SG+D+I  A+TG+GKT AF+LP+      + EL  G    A+++ PTREL +Q+   +  +++ +    S+ VYGG     Q+  L  G +I+V TPGR++D+      R      +  +V+DEADRM DMGF   + +IID     +Q ++FSAT    +          ++    VE++          IDQ +  ++++ K   L  L+ +++ +   +IF++K+  A  L+  L         S+HG   Q  R+ ++ +FK+GK+K LVAT VAARG+D+ +L  VVNYD P   +DY+HR GRTGRAG 
Sbjct:  224 WTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALAR-----RILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGN 567

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9")

HSP 1 Score: 210.69 bits (535), Expect = 9.311e-64
Identity = 130/344 (37.79%), Postives = 193/344 (56.10%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLD-LAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLP--TARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            FS+LGL + + +A ++ G+ TP+ IQK+AIPV L+G+D+I  A+TG+GKTAAF LP+L+   +K +       ALVL PTRELA Q+        + + +  + + GG+D   Q   L +   I++ATPGRL+D +   +      L+ L++DEADR+L+M F  ++DKI+  LP    R+N+LFSATM   V +       S    + VE+S+    +    + Q+ + +    K   L H+I E A +  +IF        KL   L      A  ++G  SQ  R   L  FK+     L+AT VA+RG+DI  +  V+NYD+P    DYIHR+GRT RAG
Sbjct:   26 FSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQ----RFFALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRA---SLRDPVRVEVSSK--YQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAG 360

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12")

HSP 1 Score: 207.608 bits (527), Expect = 2.967e-63
Identity = 117/342 (34.21%), Postives = 192/342 (56.14%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDT-KSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F ++GL + +L+ + A G+  P+ IQ+++I  IL G+D+IA AQ+GTGKTA F + IL+      +   +  + LVL+PTRELA+Q++  + A  +++++   A  GG +    +++L  G  ++  TPGR+ D+  +R +    +++LV+DEAD ML+ GF   I  +   LP   Q  L SAT+  ++ E  S F         + I     +    G  Q+ + V+++  K   L  L       QA+IF   K     L  ++ + +    S+HGD  Q  R+ ++ +F+SG+ + L+ T V ARGID+ ++S V+NYDLP   + YIHRIGR+GR G
Sbjct:   30 FDSMGLREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSI----DTTMRETQCLVLSPTRELAVQIQKVLLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMAD-----PIRILVKRDELTLEGXKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 362

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BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 215.312 bits (547), Expect = 3.370e-63
Identity = 129/366 (35.25%), Postives = 196/366 (53.55%), Query Frame = 0

Query:    8 LCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKD-----KGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTA-------------------------RQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            L   IL+ ++  GYT PTPIQ+QAIP+ L  +D+I  A+TG+GKT AF+LP+L   +      + E + +   A+++APTRELA Q+E     +   L + ++AV GG+  E Q  +L  G +I++ATPGRL+D+   R +       +V+DEADRM+DMGF  D+ KI+D +P                           RQ ++F+ATM   V      +   + + + +     P ++    ++Q +  + ++ K   L  ++        +IF+ +K  A KL   L K    A ++HG + Q  RE  L+  K+G    LVAT VA RGIDI  +S V+NYD+    + Y HRIGRTGRAG
Sbjct:  331 LSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYL-RRPAVVYIGSIGRPVER----VEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAG 691

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BLAST of rna helicase vs. SwissProt
Match: gi|548730|sp|P25888.3|RHLE_ECOLI (RecName: Full=ATP-dependent RNA helicase RhlE)

HSP 1 Score: 357.451 bits (916), Expect = 2.775e-119
Identity = 181/344 (52.62%), Postives = 237/344 (68.90%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILE-MFKDKGELRGK-SVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRA 342
            M F +LGL   IL+AV  QGY  PTPIQ+QAIP +L G+DL+A+AQTGTGKTA F LP+L+ +   +   +G+  VRAL+L PTRELA Q+  NV  Y+++L++ SL V+GGV   PQM +L  GVD+LVATPGRLLDL +Q AV  D++E+LV+DEADRMLDMGF  DI +++ +LP  RQNLLFSAT +DD++         K+    +EI       A+  + Q +  VDK  K  LLSH+I +  W Q L+F   KH A  L  QL K  I + +IHG++SQ  R + LADFKSG ++ LVAT +AARG+DI +L  VVNY+LP  P+DY+HRIGRTGRA
Sbjct:    1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|81768862|sp|Q8Y8N0.1|CSHA_LISMO (RecName: Full=ATP-dependent RNA helicase CshA)

HSP 1 Score: 269.626 bits (688), Expect = 2.150e-84
Identity = 155/341 (45.45%), Postives = 206/341 (60.41%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            FS  GL + I+K+V   G+   TPIQ++ IP+ L GKDLI  AQTGTGKTAAF LP++     K      +V+AL++APTRELAIQV   +   +    +  LAVYGG D   Q++ L +   I+V TPGR+LD   +R +  D +E LV+DEAD ML+MGF  DI+ I+  +P  RQ LLFSATM D +R     F  S   E+   I     +  A  I+Q+ + V +  K  +LS L+  QA + A++F   K    +L   L  R   A+ IHGD +QA R  VL  FK GK+  LVAT VAARG+DI  ++ V NYD+P  P+ Y+HRIGRTGRAG
Sbjct:    4 FSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPMIHKIDQKS----NNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHS--PEL---IRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAG 335

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|75535255|sp|Q9Z6C9.1|CSHA_LACRE (RecName: Full=ATP-dependent RNA helicase CshA; AltName: Full=Autoaggregation-mediating protein)

HSP 1 Score: 265.388 bits (677), Expect = 5.901e-83
Identity = 149/344 (43.31%), Postives = 201/344 (58.43%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREF-VSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            M FS LGL D +LKA+K  GY   TPIQ+Q IP++L GKD+I  AQTGTGKTAAF LPI+E      +    +++A++++PTRELAIQ +  +    +   +    VYGG D   Q++ L +   ILV TPGRL D   +  V  D ++ LV+DEAD ML+MGF  DI+ II   P  RQ LLFSATM  +++   V   SD +   I  +   T        +DQ+ +      K  +++ LI  Q  D  ++F   K    +L   L  R   A  IHGD +Q  R K++  FK+ +L  LVAT VAARG+DI  ++ V NYD+P  PD Y+HRIGRTGRAG
Sbjct:    1 MKFSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIENV----DTENPNIQAIIISPTRELAIQTQEELYRLGKDKHVRVQVVYGGADIRRQIKSLKQHPQILVGTPGRLRDHINRHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKETPDDRQTLLFSATMPPEIKRIGVQFMSDPETVRIKAKELTTDL------VDQYYVRARDYEKFDIMTRLIDVQDPDLTIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQDKRSKIMWKFKNNELDILVATDVAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAG 334

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|61223743|sp|P0A4D7.1|CSHA_STRPN (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|61223744|sp|P0A4D8.1|CSHA_STRR6 RecName: Full=DEAD-box ATP-dependent RNA helicase CshA; AltName: Full=Exported protein 9)

HSP 1 Score: 264.618 bits (675), Expect = 2.038e-82
Identity = 149/343 (43.44%), Postives = 206/343 (60.06%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            M F+ L L   +L  ++  G+   +PIQ+Q IP+ L GKD+I  AQTGTGKTAAF LP LE  + +      +++ALV+APTRELA+Q +  +  +     +   +VYGG   E Q++ L  G  I+V TPGRLLDL  ++A+   ++E L++DEAD ML+MGF  DI+ II R+P  RQ LLFSATM D ++     F   K  E  V+I+A         +DQ+ I V +  K   ++ L+     + A++F   K    +L   L  R   A+ IHGD  Q  R +VL DFK+G L  LVAT VAARG+DI  ++ V NYD+P  P+ Y+HRIGRTGRAG
Sbjct:    1 MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEE----ATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQF--MKAPE-HVKIAAKELTTEL--VDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAG 334

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 263.077 bits (671), Expect = 2.082e-82
Identity = 149/360 (41.39%), Postives = 213/360 (59.17%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGTPELVSSGIDKGFGAARDI 362
            F  LGL   ++KA++  G+   TPIQ + IP+ L  KD+I  AQTGTGKTAAF +PI+E    K  ++  +V+ALV+APTRELAIQV   +        +  L +YGG D E Q++ L +   ++V TPGR++D   +  +  + +  +V+DEAD ML+MGF  DI+ I+  +P  RQ LLFSATM D +R     F +    E+ V++ A   +   P I Q+ + V +  K  +L+ L+  QA + A++F   K    +L   L  R   A+ IHGD SQA R  VL  FK G ++ LVAT VAARG+DI  ++ V N+D+P  P+ Y+HRIGRTGRAG      +G+   F   R+I
Sbjct:    4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE----KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNE--PEL-VKVKAK--EMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG-----KTGVAMTFVTPREI 349

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|12644110|sp|P09052.3|VASA1_DROME (RecName: Full=ATP-dependent RNA helicase vasa; AltName: Full=Antigen Mab46F11)

HSP 1 Score: 267.7 bits (683), Expect = 4.609e-82
Identity = 157/377 (41.64%), Postives = 230/377 (61.01%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPIL-EMFKDKGELRGKSVRALVLAPTRELAIQV--EANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDR--LPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGTPELVSSGID--KGFGAARDILEGLSVLEGS 372
            F++  L D I+  V   GY  PTPIQK +IPVI SG+DL+A AQTG+GKTAAF+LPIL ++ +D  EL     + ++++PTRELAIQ+  EA   A+  +L +    VYGG     Q + +  G  +++ATPGRLLD   +  + F++   +V+DEADRMLDMGF  D+ +I+    +    Q L+FSAT  ++++     F  + V  +A+ I       A   + Q +  V+K  K + L  ++ EQA D  ++F+E K  A  L S L++++    SIHGDR Q+ RE+ L DFK+G +K L+AT VA+RG+DI  +  V+NYD+P + DDY+HRIGRTGR G     +S  D  K    A D+++   +LEGS
Sbjct:  247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIG--IVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVF-VAIGIVG----GACSDVKQTIYEVNKYAKRSKLIEILSEQA-DGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVK---ILEGS 612

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BLAST of rna helicase vs. SwissProt
Match: gi|81689748|sp|Q63GX5.1|CSHA_BACCZ (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 263.462 bits (672), Expect = 6.642e-82
Identity = 146/341 (42.82%), Postives = 205/341 (60.12%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F  LGL D +L++V++ G+   TPIQ + IP  L GKD+I  AQTGTGKTAAF LP+L    DK +   +SV+ +V+APTRELAIQV   +    +H  +  L +YGG D   Q++ L +   I+V TPGR+LD   ++ +    +E +V+DEAD ML+MGF  DI+ I+  +P   Q LLFSATM D +R     F  ++   I V+          P I Q+ + V +  K  +L+ L+  Q+ + A++F   K    +L   L  R   A+ IHGD +QA R  VL  FK G ++ LVAT VAARG+DI  ++ V N+D+P  P+ Y+HRIGRTGRAG
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL----DKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFM-TEPQHIKVKAKEV----TMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|146291075|sp|Q81IT9.2|CSHA_BACCR (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 263.462 bits (672), Expect = 7.150e-82
Identity = 146/341 (42.82%), Postives = 205/341 (60.12%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F  LGL D +L++V++ G+   TPIQ + IP  L GKD+I  AQTGTGKTAAF LP+L    DK +   +SV+ +V+APTRELAIQV   +    +H  +  L +YGG D   Q++ L +   I+V TPGR+LD   ++ +    +E +V+DEAD ML+MGF  DI+ I+  +P   Q LLFSATM D +R     F  ++   I V+          P I Q+ + V +  K  +L+ L+  Q+ + A++F   K    +L   L  R   A+ IHGD +QA R  VL  FK G ++ LVAT VAARG+DI  ++ V N+D+P  P+ Y+HRIGRTGRAG
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL----DKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFM-TEPQHIKVKAKEV----TMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|81696998|sp|Q6HPE6.1|CSHA_BACHK (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81715465|sp|Q81VG0.1|CSHA_BACAN RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|134039177|sp|A0R8U6.1|CSHA_BACAH RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 263.462 bits (672), Expect = 8.137e-82
Identity = 146/341 (42.82%), Postives = 205/341 (60.12%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F  LGL D +L++V++ G+   TPIQ + IP  L GKD+I  AQTGTGKTAAF LP+L    DK +   +SV+ +V+APTRELAIQV   +    +H  +  L +YGG D   Q++ L +   I+V TPGR+LD   ++ +    +E +V+DEAD ML+MGF  DI+ I+  +P   Q LLFSATM D +R     F  ++   I V+          P I Q+ + V +  K  +L+ L+  Q+ + A++F   K    +L   L  R   A+ IHGD +QA R  VL  FK G ++ LVAT VAARG+DI  ++ V N+D+P  P+ Y+HRIGRTGRAG
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL----DKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFM-TEPQHIKVKAKEV----TMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335

[Close]

BLAST of rna helicase vs. SwissProt
Match: gi|81700027|sp|Q73EU1.1|CSHA_BACC1 (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 263.077 bits (671), Expect = 8.568e-82
Identity = 146/341 (42.82%), Postives = 205/341 (60.12%), Query Frame = 0

Query:    3 FSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            F  LGL D +L++V++ G+   TPIQ + IP  L GKD+I  AQTGTGKTAAF LP+L    DK +   +SV+ +V+APTRELAIQV   +    +H  +  L +YGG D   Q++ L +   I+V TPGR+LD   ++ +    +E +V+DEAD ML+MGF  DI+ I+  +P   Q LLFSATM D +R     F  ++   I V+          P I Q+ + V +  K  +L+ L+  Q+ + A++F   K    +L   L  R   A+ IHGD +QA R  VL  FK G ++ LVAT VAARG+DI  ++ V N+D+P  P+ Y+HRIGRTGRAG
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLL----DKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFM-TEPQHIKVKAKEV----TMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335

[Close]

BLAST of rna helicase vs. nr
Match: gi|654487657|ref|WP_027957596.1| (MULTISPECIES: ATP-dependent helicase [Halomonas] >gi|1305099403|gb|PKH61048.1| ATP-dependent helicase [Halomonas sp. Choline-3u-9])

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 254/343 (74.05%), Postives = 299/343 (87.17%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            MPFS LGL  P+++A+   GY TPTPIQ+QAIP ILSGKDLIATAQTGTGKTAAFVLP+LE F + G+LRGK +RAL+L PTRELA+QVEANVA YA+H  L+S+A+YGGVD+E Q +RL++GVDILVATPGRLLDLA+QRA++FDEL+V+V+DEADRM+DMGF  DI KIIDRLP  RQNLLFSAT+ DDVR     FSD +++++A EIS +P  +AA  + QWLITVDKDTKSALLSHLI EQ WDQALIF EKKH+AAKLV+QL KR I ADSIHGDRSQA+REK+LA FKSG+LKYLVATGVAARG+DIG+LSRVVNYDLPF+P++YIHRIGRTGRAG
Sbjct:    1 MPFSKLGLSSPLVQAITELGYQTPTPIQEQAIPAILSGKDLIATAQTGTGKTAAFVLPLLERFSNAGKLRGKRIRALILVPTRELAVQVEANVAQYAKHTHLTSMAMYGGVDTEAQKERLIKGVDILVATPGRLLDLAHQRALHFDELKVMVLDEADRMVDMGFADDIHKIIDRLPEDRQNLLFSATITDDVRALAYDFSDRQMTDLAAEISISPNVRAAANVKQWLITVDKDTKSALLSHLINEQQWDQALIFTEKKHNAAKLVAQLEKRGITADSIHGDRSQAMREKILAQFKSGELKYLVATGVAARGLDIGELSRVVNYDLPFKPEEYIHRIGRTGRAG 343

[Close]

BLAST of rna helicase vs. nr
Match: gi|445565705|gb|ELY21814.1| (DEAD-like helicase [Halomonas titanicae BH1])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 256/343 (74.64%), Postives = 297/343 (86.59%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            MPFS LGL  P+++A+   GY TPTPIQ+QAIP ILSG DLIATAQTGTGKTAAFVLP+LE F + G LRGK +RAL+L PTRELA+QVEANVA YA+H  L+S+A+YGGVD+E Q +RL++GVDILVATPGRLLDLA+QRA++FDEL+V+V+DEADRM+DMGF  DI KIIDRLP  RQNLLFSATM DDVR     FSDSK++++A EIS +P  +AA  + QWLITVDKDTKSALLSHLI EQ WDQALIF EKKH+AAKLV+QL KR I+ADSIHG RSQA+RE VLA FKSG+LKYLVATGVAARG+DIG+LSRVVNYDLPFQP++YIHRIGRTGRAG
Sbjct:   32 MPFSKLGLSSPLVQAITELGYKTPTPIQEQAIPAILSGNDLIATAQTGTGKTAAFVLPLLERFSNAGTLRGKRIRALILVPTRELAVQVEANVAQYAKHTQLTSMAMYGGVDTEAQKERLIKGVDILVATPGRLLDLAHQRALHFDELKVMVLDEADRMVDMGFVDDIHKIIDRLPEDRQNLLFSATMTDDVRALAYDFSDSKMTDLAAEISISPNVRAAANVKQWLITVDKDTKSALLSHLINEQKWDQALIFTEKKHNAAKLVAQLEKRGIKADSIHGGRSQAMRENVLAQFKSGELKYLVATGVAARGLDIGELSRVVNYDLPFQPEEYIHRIGRTGRAG 374

[Close]

BLAST of rna helicase vs. nr
Match: gi|737586183|ref|WP_035557128.1| (ATP-dependent helicase [Halomonas sp. KO116] >gi|779738156|gb|AJY50350.1| DEAD/DEAH box helicase domain protein [Halomonas sp. KO116])

HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0
Identity = 255/344 (74.13%), Postives = 298/344 (86.63%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAGT 344
            MPF+ LGL  P+++A+   GY TPTPIQ+QAIP ILSGKDLIATAQTGTGKTAAFVLP+LE F + G LRGK +RAL+L PTRELA+QVEANVA YA+H  L+S+A+YGGVD+E Q  RL+EGVDILVATPGRLLDLA+QRA++FDEL+V+V+DEADRM+DMGF  DI KII+RLP  RQNLLFSAT+ DDVR     FSDSK++++A EIS +P  +AA  + QWLITVDKDTKSALLSHLI EQ WDQALIF EKKH+AAKLV+QL KR I ADSIHGDRSQA+REK+LA FKSG+LKYLVATGVAARG+DI +LSRVVNYDLPF+P++YIHRIGRTGRAGT
Sbjct:    1 MPFAKLGLSPPLVQAITELGYQTPTPIQEQAIPAILSGKDLIATAQTGTGKTAAFVLPLLERFSNAGTLRGKRIRALILVPTRELAVQVEANVAQYAKHTHLTSMAMYGGVDTEAQKARLIEGVDILVATPGRLLDLAHQRALHFDELKVMVLDEADRMVDMGFADDIHKIIERLPENRQNLLFSATITDDVRALAYDFSDSKMTDLAAEISISPNVRAAANVKQWLITVDKDTKSALLSHLINEQQWDQALIFTEKKHNAAKLVAQLEKRGITADSIHGDRSQAMREKILAQFKSGELKYLVATGVAARGLDIDELSRVVNYDLPFKPEEYIHRIGRTGRAGT 344

[Close]

BLAST of rna helicase vs. nr
Match: gi|1293242077|ref|WP_100635651.1| (ATP-dependent helicase [Marinomonas sp. ef1])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 256/343 (74.64%), Postives = 296/343 (86.30%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            MPF+ LGL  P++KA+   GY TPTP+QKQAIP+ILSGKDLIATAQTGTGKTAAFVLP+LE F   G LRGK +R L+L PTRELA+QVEA+VA YA+H  L+S+AVYGGVD+E Q +RL+EGVDILVATPGRLLDLA+QRA++FDEL+V+V+DEADRM+DMGF  DI+KI++RLP  RQNLLFSATM  DVR     FSDSK++++A EIS +P  +AA  I QWLITVDKDTKSALLSHLI EQ WDQALIFIEKKH AAKLV QLAKR I AD IHGDRSQA+REK+LA FKSG+LKYLVATGVAARG+DIG LSRVVNYDLPF+P++YIHRIGRTGRAG
Sbjct:    1 MPFAKLGLSSPLVKAITELGYKTPTPVQKQAIPIILSGKDLIATAQTGTGKTAAFVLPLLERFTKAGTLRGKRIRVLILVPTRELAVQVEASVAQYAKHTKLTSMAVYGGVDTEAQKERLIEGVDILVATPGRLLDLAHQRALHFDELKVMVLDEADRMVDMGFVGDINKIMERLPENRQNLLFSATMTVDVRALAFDFSDSKMTDLAAEISISPNVRAAASIKQWLITVDKDTKSALLSHLINEQKWDQALIFIEKKHGAAKLVDQLAKRGIVADCIHGDRSQAMREKILAQFKSGELKYLVATGVAARGLDIGSLSRVVNYDLPFKPEEYIHRIGRTGRAG 343

[Close]

BLAST of rna helicase vs. nr
Match: gi|1103737444|ref|WP_071693522.1| (ATP-dependent helicase [Halomonas sp. QHL1] >gi|1103336658|gb|OJA04825.1| DEAD/DEAH box helicase [Halomonas sp. QHL1])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 254/343 (74.05%), Postives = 298/343 (86.88%), Query Frame = 0

Query:    1 MPFSNLGLCDPILKAVKAQGYTTPTPIQKQAIPVILSGKDLIATAQTGTGKTAAFVLPILEMFKDKGELRGKSVRALVLAPTRELAIQVEANVAAYAEHLDLSSLAVYGGVDSEPQMQRLVEGVDILVATPGRLLDLAYQRAVYFDELEVLVIDEADRMLDMGFGRDIDKIIDRLPTARQNLLFSATMNDDVREFVSHFSDSKVSEIAVEISATPTKKAAPGIDQWLITVDKDTKSALLSHLIKEQAWDQALIFIEKKHSAAKLVSQLAKRDIEADSIHGDRSQAVREKVLADFKSGKLKYLVATGVAARGIDIGKLSRVVNYDLPFQPDDYIHRIGRTGRAG 343
            MPF+ LGL  P+++A+   GY TPTPIQ+QAIP ILSGKDLIATAQTGTGKTAAFVLP+LE F + G LRGK +RAL+L PTRELA+QVEANVA YA+H  L+S+++YGGVD+E Q +RL++GVDILVATPGRLLDLA+QRA++FDEL+VLV+DEADRM+DMGF  DI KII+RLP  RQNLLFSAT+ DDVR     FSDSK++++A EIS +P  +AA  + QWLITVDKDTKSALLSHLI EQ WDQALIF EKKH+AAKLV+QL KR I ADSIHGDRSQA+REK+LA FKSG+LKYLVATGVAARG+DI +LSRVVNYDLPFQP++YIHRIGRTGRAG
Sbjct:    1 MPFAKLGLSTPLVQAITELGYQTPTPIQEQAIPAILSGKDLIATAQTGTGKTAAFVLPLLERFSNAGTLRGKRIRALILVPTRELAVQVEANVAQYAKHTHLTSMSMYGGVDTEAQKERLIKGVDILVATPGRLLDLAHQRALHFDELKVLVLDEADRMVDMGFADDIHKIIERLPENRQNLLFSATITDDVRALAYDFSDSKMTDLAAEISISPNVRAAANVKQWLITVDKDTKSALLSHLINEQKWDQALIFTEKKHNAAKLVAQLEKRGITADSIHGDRSQAMREKILAQFKSGELKYLVATGVAARGLDIDELSRVVNYDLPFQPEEYIHRIGRTGRAG 343

The following BLAST results are available for this feature:

BLAST of rna helicase vs. L. salmonis genes
BLAST of rna helicase vs. SwissProt
BLAST of rna helicase vs. nr

BLAST of rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000004918	1.095e-74	40.61	supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989...	[more]
EMLSAG00000005110	1.690e-73	39.02	supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1...	[more]
EMLSAG00000001805	1.087e-72	38.65	supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1...	[more]
EMLSAG00000010143	2.068e-70	40.60	supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1...	[more]
EMLSAG00000011189	4.346e-69	39.65	supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1...	[more]
EMLSAG00000011452	5.577e-67	36.75	supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1...	[more]
EMLSAG00000011390	2.294e-65	36.39	supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1...	[more]
EMLSAG00000000846	9.311e-64	37.79	supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:...	[more]
EMLSAG00000007141	2.967e-63	34.21	supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1...	[more]
EMLSAG00000008048	3.370e-63	35.25	supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1...	[more]

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BLAST of rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|548730\|sp\|P25888.3\|RHLE_ECOLI	2.775e-119	52.62	RecName: Full=ATP-dependent RNA helicase RhlE	[more]
gi\|81768862\|sp\|Q8Y8N0.1\|CSHA_LISMO	2.150e-84	45.45	RecName: Full=ATP-dependent RNA helicase CshA	[more]
gi\|75535255\|sp\|Q9Z6C9.1\|CSHA_LACRE	5.901e-83	43.31	RecName: Full=ATP-dependent RNA helicase CshA; Alt...	[more]
gi\|61223743\|sp\|P0A4D7.1\|CSHA_STRPN	2.038e-82	43.44	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81675946\|sp\|Q5L3G9.1\|CSHA_GEOKA	2.082e-82	41.39	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|12644110\|sp\|P09052.3\|VASA1_DROME	4.609e-82	41.64	RecName: Full=ATP-dependent RNA helicase vasa; Alt...	[more]
gi\|81689748\|sp\|Q63GX5.1\|CSHA_BACCZ	6.642e-82	42.82	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|146291075\|sp\|Q81IT9.2\|CSHA_BACCR	7.150e-82	42.82	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81696998\|sp\|Q6HPE6.1\|CSHA_BACHK	8.137e-82	42.82	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81700027\|sp\|Q73EU1.1\|CSHA_BACC1	8.568e-82	42.82	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]

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BLAST of rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|654487657\|ref\|WP_027957596.1\|	0.000e+0	74.05	MULTISPECIES: ATP-dependent helicase [Halomonas] >...	[more]
gi\|445565705\|gb\|ELY21814.1\|	0.000e+0	74.64	DEAD-like helicase [Halomonas titanicae BH1]	[more]
gi\|737586183\|ref\|WP_035557128.1\|	0.000e+0	74.13	ATP-dependent helicase [Halomonas sp. KO116] >gi\|7...	[more]
gi\|1293242077\|ref\|WP_100635651.1\|	0.000e+0	74.64	ATP-dependent helicase [Marinomonas sp. ef1]	[more]
gi\|1103737444\|ref\|WP_071693522.1\|	0.000e+0	74.05	ATP-dependent helicase [Halomonas sp. QHL1] >gi\|11...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2_size2283618	supercontig	scaffold2_size2283618:1007362..1012772 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold2_size2283618-processed-gene-10.6-mRNA-1	snap_masked-scaffold2_size2283618-processed-gene-10.6-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2_size2283618:1007362..1012772+

gene from alignment at scaffold2_size2283618:1007362..1012772+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold2_size2283618-processed-gene-10.6 ID=snap_masked-scaffold2_size2283618-processed-gene-10.6|Name=rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=5411bp|location=Sequence derived from alignment at scaffold2_size2283618:1007362..1012772+ (Tigriopus kingsejongensis)
ATGCCATTTTCAAATCTTGGATTGTGCGATCCCATTCTGAAAGCCGTGAA
GGCTCAGGGTTATACAACGCCTACGCCAATCCAAAAACAAGCGATCCCCG
TGATCCTATCTGGCAAAGATCTCATTGCCACTGCGCAAACCGGCACGGGT
AAAACAGCTGCTTTTGTGCTGCCCATCTTAGAGATGTTTAAGGATAAGGG
TGAGTTGCGCGGTAAAAGCGTCCGTGCGTTGGTCTTGGCACCTACACGAG
AGCTGGCGATACAGGTTGAAGCCAACGTTGCCGCGTATGCCGAGCATCTA
GATCTGAGTTCGCTGGCTGTCTATGGAGGCGTGGACTCTGAGCCTCAGAT
GCAGCGATTGGTGGAAGGAGTGGATATTTTGGTCGCTACACCGGGGCGGC
TGCTTGATCTGGCTTACCAACGTGCGGTGTATTTCGACGAACTGGAAGTG
TTGGTGATCGATGAAGCCGATCGAATGCTGGATATGGGCTTTGGCCGCGA
CATAGATAAAATTATTGATCGGCTGCCCACGGCGCGTCAGAACCTATTGT
TTTCCGCCACCATGAACGACGATGTGCGTGAGTTTGTCTCGCACTTCTCT
GACAGTAAGGTGAGTGAGATTGCAGTAGAAATATCTGCCACTCCCACAAA
GAAAGCTGCGCCTGGCATTGATCAGTGGCTAATCACCGTCGACAAAGATA
CGAAGTCCGCTTTGCTCAGCCACTTGATAAAGGAGCAAGCTTGGGATCAG
GCGCTCATTTTTATCGAGAAGAAACACAGTGCGGCCAAGCTGGTCAGCCA
GCTGGCGAAGCGTGATATTGAAGCGGACTCCATACACGGGGACCGGAGCC
AAGCGGTGCGGGAAAAAGTACTGGCTGATTTTAAATCAGGCAAGCTCAAA
TACTTGGTCGCCACAGGGGTTGCCGCGCGTGGTATCGATATTGGAAAGCT
CAGTCGCGTGGTCAATTATGATCTGCCATTCCAGCCTGATGATTATATCC
ACCGTATTGGCCGGACAGGCCGTGCAGGCACGCCAGGTGAGGCAATCTCG
TTTGTGACATTGGCTGACTTCAAGAATCTATGCGCGATAGAAAGCAGTCT
AAATAGTTTAATAGCCCGAAAAGAAATAGACGGGTTCCCCGTCCGCAAAG
CAGTGCCAGTCTCTGTTTTGAATCATGTGAGCAAGCGATCACCAGGGCGT
TAACGGCGATACCCTCAACACCAACGAGAGAGCAGATTGATCAGTCGGGA
TGGGTGCATGAGTACCCGCTATCTCGTCTGATGACTCCAAGCGATAAAGC
AGATGCCGGATATTAAACATTACCTCAGTGGTTACGGCCCCGATGTGCTT
GCACAGGTTGAGCAGCTCGTGGAGCAAAAACGCTTAGGGCATGTGCTGAA
GAAACGTTACCCGGAACCACATGCCTTTGCTTCTAATAAAGCACTGTATG
ACTATGTATCGGATTTAAAAAACACTTACATCAAAAAATCTTCACCATTG
AGTAAGGTCGTTTACGACGACAAAATTCATATCATTAATCAGGCGCTTGG
GTTGCATACGCAACTCTCGCGGGTGCACGGTGGCAAACTAAAGTCGAAAA
TAGAAATTCGCATTGGCTCTGCTTTTAAGAAAATGCCACTGCCTTTACTG
CGCATGATCTGCGTGCATGAGCTGGCGCATCTGAAAGAAAAAGACCACAA
CAAAGCCTTCTATAACCTCTGCCAATACATGGAACCCGACTATCATCAGC
TGGAGTTTGATACACGCTTGTACTTGACGCATCAAGAGTTTTTTGGCGAC
CTGTATGAATAATCCTACCGCCTGCCACTTGAATCGATTCAGTGGAAAGA
CACCGATTATGCACCTTTAATAGGGTTGAAGGCGTTATGTGCCGGTACCT
TGGTGAGCAGGTTGTGCTATCGCCGCCAAACAGAAAGTGCTGGCGTACAC
GATGGTATTGGAAGTAGTGCGTTTTTGTTAGAAGCTGTTGCCGCCAAGCA
TTCTAGGATCCTCCTTAGGTTCGTTGACAAAGATTATTGATTTAGATGAG
CACCTAGGCAATTGTGGCAGTAGGGCTCCAATACTTGGACGTATCGGGAG
GGCGATTATTTTTACTGGCACGCTTGCGGCAAAACTAGTGTATGGTCAAT
CTCAGTAGGAACTCTGTTCCGATCCTCTCTCGAGCATAATCTCTCGCCAG
TTCATCGGCAATTTCACCCGCTCTCTTTCTGAGCCCGACGCTTAAATCGT
CTTGTCTGCGCCACTTTGGCGTGTGGCTTTCGTGTGCGCGCAATATTGAC
AATTTGTAGACGTTTCCCTTGGCTAGCAGCTTTTACAAGCATGCCCAAGT
TGGAAATTTTGATGAGAATTTTCTAGGAAAATATTTAGTACCATGCCTAT
AAACAACACTGTGTTAGAAGAAGGACCCGAGGTTAAAGCGTCGAAACCTA
CGATACTTTCCTTTGCTAAAGACCTACCGAATATCTGTTCGTTGGCTGGA
TTGGGTTGCACAATACTCGCGATATATTTCAGTATTTTGGGGATCTACTC
TGCAGCCATGATCGGCATGGTATGGGCCGTTGCTTTTGATTGGGCTGACG
GTCTAATCGCTAGAAAGATGAAAGGACGTACGGGTACTGACAGCGCATTT
GGTGGGCAAATTGATGTTCTGATCGACATCGTAAGTTACGGTGTTACACC
TGCAATTCTTCTTTTGAGCTACGGCGGTTTCGAACCCATATTTTTGGTAG
GAGCTTTTATCATGCTCGCTACTTGCGCATTAAGATTGAGCTATTTTGCG
ACATTTGGACTCTCTGATGATTCTAAATATATCGGATTAGCCATGGATAA
CAACAGCCTGATACTTGTCTTTGTCTTGTTTTTTGAAGGGATGGTTAGCG
AAGGGGCGTTCTCGCTGATCCTTTATGCATGTTGTCTCAGGCTTGCCGCA
TTAAACGTTTCCAAAATCAAGACACCTAAGCTTTCTGGAAATCCTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGACACCTAAGCTTTCT
GGAAATCCTAATAACGTCCGTATTCTCGCAGCGTATACGCTTGGAACGAC
AGCTTTCTGTTTATGGAAGCTTTTGTAAAAGTTAATGCAAGTCATGAGGA
TTGACTATCGGAACAGTACTTCTAATTAGGGTTGATGAGAAAAATGGTTG
TTTATACCGTAGGAACGTTTGATTTGTTGCATGTAGGGCACCTCGCATTG
CTTGAGCAATGTCAGAAGATGGGTGATGTCGTGGCGGTTGGTGTCGCGTC
TGATAGGGTGGTGAACTCTTACAAGCCCAACGTTCCCGTTATTCCTCTCG
CTCAGCGCGAAGAGATGTTACGGGCATTACGCTGTGTTGATATTGTTCGT
CCTTATCATGAGCTGGAATATGTTTCTGGCTGCAAGGCATTGGATGTTGA
TATATTTGTGGTCGGTGAAGATTGGGGACGCAATACCCATAATTTGGATG
TGGAAACTTATCTGTTGTCCCGTGGTAAGCAGGTAATCAAAGTTTTATAC
GATAAACGCACCTCGTCTACGCAAATTAAGCACTGTGTTTTAGACCAGAA
CTCAGTTCAGTCACCTGAAAGAGAACGGGCAAGACAATTAGCGGCTACTC
ACTAACACCACATCGTGTCAGTAAGGCTGCATCATTGAAACGTACTTGAA
TAACTCGCGTGTTTGTCTGTCCGATGGTTTTATCTGACTTCACGTGGCTG
TTAAAACTTTGATGTATAGTGAGTTTTTTGTTCATATTGGGGTGCGGCGT
GAGCAAAGCTACTGACAAAGAATTAGTGATGATGCGTACTGATGTAAAAG
ACTCTTTGCAACGCCTGTGTTCAAGTGCATCAAGCGGTGTCTGTCTAGCC
GCATGCTCCCTTGTCTTCTTGGCCGCTCTTGTCGGGAAGCCCGCATTGGC
CCAGACGATTCCTTGTGCCGATGTTCGGTTTTTGATCGAGCAATCTAGAA
CTGGATTTCTGGCGATTCAGCGGGATACACGCCATGAGTTTGGAGGCTTT
GATACGACGATAAAGCTGTCAGAAGCTGAGTACTGTGTGATTCTTGAAGA
CGTTGAAAAGCGGTCGTTTAGGTGCGCTTGGAAATACTCTCACTCAGATA
GGCAGGCCGAAGCAAAATATACACAGATGCGCGAAAACCTTGTTGTGTGT
TTGGGCAATAGTGCCAGTGTACAAAAGGACCAACCGGTCAATCACCCCGA
CATCTACGAGTCTTACCTATACAGGTTACCGGCTGTTGAGCTACGCATTT
CTCTCAAGGAGAAAAGCGCGTTGAAGAGCACTTTTGTCTCGTTTGTTGTT
GAGCAACGGCCAGCGAAATAGGCTGGACAATCCGTTTCCACGAGAGACGT
TTCCCGATAGTTGAGTTGCTGGGCTTGAACATCCTTTTTGTTAGTCGACA
AAAACGGTCGTTTTGCTTCTGTGCCACTGTCTGTTGCGTGTTAGGCGCGT
TAGCCCTTCAGAGCGGTGGGGCCATGCAAAACAAGCGGCCTTTTACACGC
TATCAGCTAGTCTCGAGTCCATAGTCTGCAGACTGTGGGGCTGAACTCCA
CGATTGTTAGTCTAAGTTCGAATGAAAAGCCGCCGATGTTATCGGGGTAG
CTCTACTGTGTCCTTGGTTTAGAGCGGAGAACCAGTGAGTACGCTAATGG
CCGTTTCACCTCTAGCAACATCTTCTGCACTAAGCTCAGAGTCAATTAGC
GACCGTCCGCGCAATCAGATAGCTTCGGCTGAAAAACAATCGAATTCTGA
ACCGTTGAGTGCGTCGGAGTTACGTAATCAGCGAGCGAAACAACATAATC
TCGCGATTCTTGAAGCCAATCAAAACGCTAGTCTATCGGTCTCTGGACAG
CCGCTGAGTTTGCTGTACCAAACTGCCATTAACGCGATAAACGCCGAGCT
TGCATCGACCATGGGCGACAACGCCGTTGAACGCACTCAACACGAGGGGA
TAGATACCTCTCCCGAGGCGACGGCCGGGCGCATTGTGAGCATAACGATG
GGAAATTTCGGCAAGTTCCAAGAACACCACGCCGATTTGCCGCAGTCTGA
ACAAGTTGATCGCTTTTTAGAACTGGTCAGCTCAGGGATTGATAAAGGCT
TTGGCGCCGCCAGAGATATCCTGGAGGGTCTCTCCGTACTCGAAGGCTCT
ATCGCTGAGGATATTAGTAAAACTTATGATCTAGTGCAGCAGGGTTTAGA
GCACTTTCGTGAGCACTTCTTGGCTGATAATAGCTCTGAAGAAAAGGCCG
ATGATGTCTAG

Synonyms

The feature 'rna helicase' has the following synonyms


Synonym
Tk00049

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