BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30")

HSP 1 Score: 228.409 bits (581), Expect = 1.234e-65
Identity = 132/380 (34.74%), Postives = 203/380 (53.42%), Query Frame = 0

Query:    7 TSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMD-----LNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIV-AGGQKLD-VLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQK-----IELMEL 374
            TSF        L++ + K  +  P+PIQ+  IP+ + G D +G A+TG+GKTA F  P++  +      LN  G   L+L PTRELA+Q+    + +  ++   + +  YGG     Q +  + G  + + TPGR++D ++    NL  +  LVLDEAD M  MGF   V  I +     RQ  LFSAT  ++++++A   L DP  ++       +E + Q  +++  GG K + VL  ++E    G+++IFV  KL   +LA  L  + +    + GD+ Q  R   I + KK    I+VATDVAARG+D+  +  V+NYDI  D +++ HRIGRTGRAG  G A   V  +++     I R  +Q       ELM+L
Sbjct:  276 TSFGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFG-KVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQANQDVPKELMDL 654          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 220.32 bits (560), Expect = 1.401e-64
Identity = 129/334 (38.62%), Postives = 192/334 (57.49%), Query Frame = 0

Query:   27 YEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLN----ASGVQ----VLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTA-ETIRQRYQIVAGGQKLDVLTRILEA--EEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILF 349
            ++ P+PIQ+   P++  G DV+G A+TG+GKT AF++P L+ +         GV     +L++APTRELA+Q     ++   E+ GF  L +YGG     Q +SLK GV ++V TPGR++D    G ++L  +  +VLDEAD ML  GF  D+  IL QT K+RQ  LFSAT P  I+++A+  L  P  + +  +   A +T+ Q  ++V    +   +  +L    ++   I+IFV  K     L + L    +    + GD  Q  R + +E  K G + I++ATDVAARG+D+  V +V+NY  P   E YVHRIGRTGRAG++G A  F
Sbjct:  128 FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEI-GFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSLKHE-WNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTF 459          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000000249 (supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 gene:EMLSAG00000000249 transcript:EMLSAT00000000249 description:"maker-LSalAtl2s1036-augustus-gene-0.32")

HSP 1 Score: 217.624 bits (553), Expect = 2.000e-64
Identity = 122/363 (33.61%), Postives = 193/363 (53.17%), Query Frame = 0

Query:    1 MTAETATSFNELKLS-TPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIE 362
            +TA     F +  L    LM + EK G+E PSPIQ  +IP+ + G D+L +A+ GTGKT A+++P+L Q+D +   +Q +++ PTRELA+Q ++      ++ +   V+   GG      I  +   VH+VV TPGR++D + +G   +   K + LDEAD++L   F   ++ ++E  P++RQI L SAT P  ++     H+  P  + + +   T + I Q Y  V   QK+  L  +    +    IIF  +      LA K+   GY+   +   + Q  R R     + G    +V +D+  RGID++ V  VIN+D P   E+Y+HRIGR+GR G  G AI  +   +R +L  IE
Sbjct:   45 VTATKGNEFEDFCLKRETLMGIFEK-GWEKPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPILEQIDPSNDVIQGMIIVPTRELALQTSQ-ICIELSKHRNVKVMVTTGGTNLKEDIMRIYEKVHLVVATPGRILDLIEKGVAKVMNCKVICLDEADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPYEVNL-MDELTLKGITQYYAFVQERQKVHCLNTLFTKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFLLHRIE 404          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 219.55 bits (558), Expect = 1.201e-63
Identity = 129/383 (33.68%), Postives = 207/383 (54.05%), Query Frame = 0

Query:   16 TPLMQVLE----KVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLL--------SQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPY-TGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTP----KKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGA---IIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVA-----PRERRMLSSIERATKQKIELME 373
            TP   +L+    +  Y  P+P+Q  A+P+I+  HD++  AQTG+GKTA F LP++        S    + +  + L+L PTREL +Q+ +  + Y A+M       +YGG    + +   L   V ++  TPGR++D + +  ++   ++ LV+DEAD ML MGF + ++ ++         KRQ  LFSAT P +I+ +A+ +L D   + V V    +E I Q    V   +K+  L   L+  E      I+IF R K     LA +L    +    + GD  Q+QRE  +   K+G   I+VAT+VA+RG+D+ +V+ VINYD+P D  +YVHRIGR+GR G +G +I F       P  + +++ ++ A +   E +E
Sbjct:  169 TPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKM-NIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVLKEAKQHVPEWLE 550          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000005732 (supercontig:LSalAtl2s:LSalAtl2s309:725565:728317:1 gene:EMLSAG00000005732 transcript:EMLSAT00000005732 description:"maker-LSalAtl2s309-augustus-gene-7.79")

HSP 1 Score: 215.312 bits (547), Expect = 4.687e-62
Identity = 119/383 (31.07%), Postives = 194/383 (50.65%), Query Frame = 0

Query:    8 SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHI--------MVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAP-RERRMLSSIERATKQKIELMELPSTQAIN 381
            +F   +  +P+++ L+  GY+ PSPIQ  A+P  + G D L Q+++GTGKT  + L  LS +D+ ++ +Q L++APTRE+A+Q A+        +         GG         LK+  H+  G+PGRV   +  G +N+  LK  +LDEAD++    F +D+ WI+   P+  Q    SAT P  ++    S L +P H+        ++ V     E+            K + L +++    F   I+F    L    + DKL  RG+    L+G   QK R  +++ LK     I++ TD++ARGID   V  VIN+D+P    +Y+HRIGR GR G  G A+   +   E + +S+I ++T   + + + P +   N
Sbjct:   21 TFEHFQFQSPILEGLKVNGYQVPSPIQVSALPYTLAGLDXLVQSKSGTGKTLVYVLSALSSIDVESNELQGLLIAPTREIAVQGAQTMLEIGGHLSKLKASTFIGGMSVEEDKLKLKK-CHMAFGSPGRVKQLIEEGVMNVSQLKVFILDEADKLCEKSFKEDLSWIMRTLPEIHQTLALSATFPNSLENTLISKLKNPTHVRLGQDCQVLLGVNQFVLESPSHGLVKKVVDYKFESLLKLISNVSFEQCIVFCNYSLRARAICDKLNDRGWPAIFLAGMQEQKDRLNSLKDLKTFRCRIVLTTDLSARGIDARHVNFVINFDVPSQGTTYLHRIGRAGRYGSKGIALTIASKGDEMKNVSNIAKSTNSDVRVTDDPESDLWN 402          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14")

HSP 1 Score: 214.542 bits (545), Expect = 2.025e-59
Identity = 126/353 (35.69%), Postives = 192/353 (54.39%), Query Frame = 0

Query:    8 SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPL----LSQMD----LNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLP------LYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDA 346
            SF ++K   P+++ L++ G E P+ IQ Q IP ++ G D++G A TG+GK+  F LP+    L Q      +   G   L++ P+RELA Q+ E+  +Y + +K  +  P        GG   +  +  +K+GVH+VV TPGR+MD + +  LNL   + L LDEAD M+ MGF +DV  I      +RQ  LFSATMP++I+  A S L  P  + V    + +  I Q  + V    K+  +  +L+      ++IF   K     + + L  +G +   + G   Q  R + +   +    D++VATDVA++G+D   + HVINYD+P D E+YVHRIGRTGR    G A
Sbjct:  974 SFQDMKFPLPIIKALKEKGIERPTSIQMQGIPAVLSGRDLIGIAYTGSGKSLVFILPIVMFCLEQEKRLPFVQNEGPYGLIVVPSRELAKQIHESIYSYFSYLKK-NSFPEIRSCLAIGGTSSSETMDVVKKGVHIVVATPGRLMDLLNKKMLNLEICRYLCLDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYVKSEAKVVHIIEMLKKTP-PPVLIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYA 1324          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000012588 (supercontig:LSalAtl2s:LSalAtl2s93:784098:785897:1 gene:EMLSAG00000012588 transcript:EMLSAT00000012588 description:"maker-LSalAtl2s93-augustus-gene-7.24")

HSP 1 Score: 192.971 bits (489), Expect = 3.424e-55
Identity = 128/374 (34.22%), Postives = 207/374 (55.35%), Query Frame = 0

Query:    5 TATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEG--HDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGV----HVVVGTPGRVMDH-MRRGTLNLGALKTLVLDEADEMLRM-GFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQ-KLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIP------HDTESYVHRIGRTGRAGRTGDAILFV-APRERRMLSSIE 362
            +  SF  L L   L++ +  +G+ +PS IQ  A+P ++     +++ Q+Q+GTGKTAAF L +LS++D + +  QVL L+PT ELA+Q  E     A +M  F   P    + Y  +   + RG     H+++GTPG+ MD  ++    ++  +K  VLDEAD M+ M G  D    I +      Q+ LFSAT  + +   A + +++P  I ++ +  T + I+Q +      + K   ++ I      G  +IF +T+     LA+KL   G++V  LSG++   +R R +++ + G   I++ T+V ARGIDVE+V+ V+N+D+P       D E+Y+HRIGRTGR G+ G AI  V  P+   +L  IE
Sbjct:   58 SVKSFESLNLKPALLKGVYGMGFNNPSKIQEMALPALLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDXSLNYPQVLCLSPTYELALQTGEV----ATKMSQFS--PELTVR-YAVRGEEIPRGSKITDHIIIGTPGKTMDWAIKFKFFDIKKVKVFVLDEADVMIAMQGHQDQSIRIQKSLSPDCQMLLFSATYDEDVMNFAENIISNPVLIRLRREEETLDNIKQYWVSCETLEAKXXAISNIYGVITIGQAMIFCQTRKGASWLAEKLVKEGHSVGMLSGELSIDERIRMLDRFRDGMEKILITTNVMARGIDVEQVSIVVNFDLPVDVAGKADCETYLHRIGRTGRFGKKGLAINLVDGPKSMAVLKDIE 424          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000012967 (supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:1 gene:EMLSAG00000012967 transcript:EMLSAT00000012967 description:"maker-LSalAtl2s98-augustus-gene-12.20")

HSP 1 Score: 197.593 bits (501), Expect = 1.491e-54
Identity = 116/356 (32.58%), Postives = 189/356 (53.09%), Query Frame = 0

Query:    9 FNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGV-QVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQK----LDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQ-----RERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRE 354
            F  + LS  + + ++K GY+ P+PIQ + IPLI+EG DV+G A+TG+GKT AF +PLL ++     G  + ++L+PTREL++Q    F+  A +  G   + + GG+    Q   +     V++ TPGR +       L L A++ +V DEAD +  +GF + ++ IL +    RQ  LFSAT+P+ +   A + LNDP  + + V T   ET+   +       K    + +L +++  EE   + +  R  +  + L           A +S   +  Q     R+    +       +++ TD+AARGID+  + +VINY  P  ++ ++HR+GR  RAGR+G AI FVA  E
Sbjct:   33 FQSMGLSREVFRGIQKKGYKVPTPIQRKTIPLILEGRDVVGMARTGSGKTGAFLIPLLEKLCSGNRGKPRAMILSPTRELSLQTLRFFKELA-KFSGLKAMSILGGESMEKQFAGMHNNPDVLIATPGRFVHLCVEMNLRLDAIQYVVFDEADRLFELGFGEQLKEILGRLSDDRQTLLFSATLPKLLVEFAKAGLNDPTLVRLDVDTKIPETLSLAFISCRDEGKPALLVHILQKLIAKEEQTIVFLATRHHVEYIHLL-------LDSAEISNTYIYSQLDPSARKINTAKFTSNQCSVLLVTDLAARGIDIPLLDNVINYHFPAKSKLFIHRVGRVARAGRSGLAISFVAGDE 380          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33")

HSP 1 Score: 192.971 bits (489), Expect = 8.058e-53
Identity = 131/406 (32.27%), Postives = 211/406 (51.97%), Query Frame = 0

Query:    9 FNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMD----LNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRG-TLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVK--VKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRT-KLATV--DLADKLAARGYAVAPLSGDVVQKQRERTIEQL-KKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERR-MLS--SIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDD 400
            F ++ LS   ++ L++  Y+ P+ IQ ++I L   G DVLG A+TG GKT AF +P+L  +         G+  LV+ PTRELA Q+ E  +      + F    + GG+    + + L    ++V+ TPGR++ HM      +   L+ LVLDEAD  L +GF + +  IL   PK+RQ  LFSAT  + IK +    L +P ++ +    K ST E + Q Y +    +K+D+L   +++      ++FV++ K A    +L  K+   G +V  L G + Q +R    E+  ++    ++ ATD+AARG+D  +V  V   D P D ++Y+HR+GRT R    G +++ + P E   ML   SI R   ++IE         +N K+    + +I   LA D+
Sbjct:  104 FRDMPLSAYTLKGLKENNYDEPTQIQKESIGLCFRGSDVLGAAKTGCGKTLAFVIPILELLHREKWTKLDGLGALVITPTRELAYQIFETLRKVGKHHE-FSAGLVIGGKDLQYETKRLS-TCNIVICTPGRLLQHMDENPQFDPITLQILVLDEADRCLDLGFAETMNAILGNLPKERQTLLFSATQTRSIKDLGRLSLKNPVYVSIHEHSKFSTPEKLTQNYMVCELDKKMDMLLSFIKSHRKSKTLVFVQSCKQARYFQELLKKIRV-GVSVLGLYGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLTPSEEEGMLKQLSIHRVPIERIE---------VNPKKLTTCQMKIEANLAGDN 497          

BLAST of rna helicase vs. L. salmonis genes
Match: EMLSAG00000011335 (supercontig:LSalAtl2s:LSalAtl2s781:205091:212596:-1 gene:EMLSAG00000011335 transcript:EMLSAT00000011335 description:"maker-LSalAtl2s781-augustus-gene-2.34")

HSP 1 Score: 189.504 bits (480), Expect = 5.296e-51
Identity = 118/367 (32.15%), Postives = 195/367 (53.13%), Query Frame = 0

Query:   12 LKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLN--LGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVK-----VKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAI--IIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKI 369
            L L   L++  E +G + P+P+Q   +  I++G + +G A+TG+GKTAAFALP+L  +  +  GV  LVL PTRELA Q+ + F+     +    V  + GG+    Q   L    H+++ TPGR+ DH++  T +  L  ++ LV+DEAD +L  GF + +  I    P +RQ  LF+AT  + +K +   + +D Q    +       + T  T+ Q Y +     + D      + E  G +   I      + V L        +++ P      Q++R +++ + +     I++ATDVA+RG+D+++V +VIN++IP D + YVHR+GRT RAGR G  I  + P +  ++ SIE     K+
Sbjct:   79 LGLKPWLLRQCETIGLKAPTPVQQATVSKILKGANGVGIAKTGSGKTAAFALPILDALSEDPYGVFALVLTPTRELAYQIGDTFKILGKPL-NVKVSIIVGGRDMVMQGSELSTSPHILIATPGRLADHLQSITSSKLLKKIRFLVIDEADRLLEGGFDEQLSQIFTAIPSERQTLLFTATHTEALKDLIEVN-SDKQPFFYREGEDDASSLTVNTLEQYYVLTPADFR-DAYLVGXDHEMPGGVSQCILYNICFSNVSL--------HSMKP------QRERLQSLSRFRSHLAKILIATDVASRGLDIQQVEYVINHNIPTDAKDYVHRVGRTARAGRXGXXISLLXPHDVLLIQSIEEMISSKL 428          

BLAST of rna helicase vs. SwissProt
Match: gi|11386733|sp|P57453.1|DEAD_BUCAI (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 523.857 bits (1348), Expect = 3.005e-179
Identity = 282/619 (45.56%), Postives = 396/619 (63.97%), Query Frame = 0

Query:    7 TSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPRE--KRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGG---FTGGGDKRPKRDAKAGSKGSKFKR 620
            ++F+ L L+  ++Q L ++GY  PSPIQA  IPL++EG DVLG AQTG+GKTAAF+LPLL  +++N    Q+LVLAPTRELA+QVAEAF  ++  M G HVLPLYGGQ Y  Q+R+L++G  +VVGTPGR++DH++RGTLNL  L  LVLDEADEMLRMGFI+DVE I+ Q PK+ Q ALFSATMP+ I+RI+   + +P+ I ++   +T   I+Q Y +V  G+K D L R LEAE+F A IIFVRTK AT+++++ L   GY  A L+GD+ Q  RE+T+E+LK G LDI++ATDVAARG+DV+R++ VINYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IER  KQ I  ++LP  + + ++R   F +++   L S DL  ++ +L +  + +D+    +AAAL +  QG +P ++       KP         +  +R+SR         D  F+D   RE  +      D     +  E YR+EVG    V+  +IVGAIANE  I+S++IG I +   +S I+LP+GM KD     +   +  + +N+  + D     N++  +   +K K      + G   +     K   K S F+R
Sbjct:    6 STFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIPKEHQTALFSATMPEAIRRISKRFMRNPKEIKIQSNITTRPDIKQSYWMVY-GRKTDALIRFLEAEDFSATIIFVRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKQSIPEVQLPKVELLCQRRLEQFAKKVQQQLESRDLDEYSALLDKLYSTDDLDIKTLAAALLKMAQGERPLII-------KP---------DVIKRQSR---------DLLFQDDRRREDNRNSRTRRDRRDINKDAELYRIEVGRNDGVEVRHIVGAIANEGNINSRNIGNIKLFSSYSTIELPKGMSKDLLQTFNRTRILNKPINMKLLRDSRHYENKTTHRSIFNKDKNSNRRVSDGSFNKSNSPKKTEFKSSFFRR 598          

BLAST of rna helicase vs. SwissProt
Match: gi|614140103|sp|P9WH04.1|DEAD_MYCTO (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A >gi|614140109|sp|P9WH05.1|DEAD_MYCTU RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 519.62 bits (1337), Expect = 3.838e-178
Identity = 275/569 (48.33%), Postives = 377/569 (66.26%), Query Frame = 0

Query:    3 AETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNI 571
            A +A +F +L++   +++ +  VGYE P+ IQA  IP +M G DV+G AQTGTGKTAAFA+P+LS++D+ +   Q LVL PTRELA+QVAEAF  Y A +   +VLP+YGG  Y  Q+  L+RG  VVVGTPGR++DH+ R TL+L  +  LVLDEADEML MGF DDVE IL +TP+ +Q+ALFSATMP  I++++  +L+DP  +  K KT+ AE I Q Y  VA  +K+D LTR+LE E F A+I+FVRTK AT ++A+KL ARG++ A +SGDV Q QRERTI  L+ G +DI+VATDVAARG+DVER++HV+NYDIPHDTESYVHRIGRTGRAGR+G A++FV+PRE  +L +IE+AT+Q +   +LP+ + +N +R   F   I++ L    +  F  ++ E+  E+D+    +AAALA Q +G + F++     +  P                    P SR       DRP R KR P   D+TT       YR+ VG  H + PG IVGAIANE G+     G+I I  DFSL++LP  +P+ T   L+   ++G  +++
Sbjct:    9 AASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALAVQCRGGEAFLM-----APDP--------------------PLSRRNRDQRRDRPQRPKRRP---DLTT-------YRVAVGKRHKIGPGAIVGAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDL 540          

BLAST of rna helicase vs. SwissProt
Match: gi|25090073|sp|Q8K9H6.1|DEAD_BUCAP (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 520.005 bits (1338), Expect = 1.117e-177
Identity = 276/618 (44.66%), Postives = 403/618 (65.21%), Query Frame = 0

Query:    5 TATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGGFTGGGDKRPKRDA--KAGSKGSKFKR 620
            T ++F+ L L+  +++ L K+GY  PSPIQA  IPL++EG DVLG AQTG+GKTAAF+LPLL  +++N    Q+LVLAPTRELA+QVAEAF  ++  + G HVLPLYGGQ Y  Q+R+L++G  +VVGTPGR++DH++RGTLNL  L  LVLDEADEMLRMGFI+DVE I+ Q PK+ Q ALFSATMP+ I+RI+   + +PQ I ++   +T   I+Q Y +V  G+K D L R LE E+F A IIFV+TK AT+++++ L   GY  A L+GD+ Q  RE+T+E+LK G LDI++ATDVAARG+DV+R++ VINYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IER   Q I  ++LP  + + ++R   F +++ + L S DL  ++ +L +  + +D+    +A+AL +  QG +P +++ KD   +P  +   +D + R  ++     R+R + R  +D                    ++ YR+E G    V+  +IVGAIANE  I+S++IG I +   +++++LP+G+ KD    L    +  +K+NI  + D +    R+ ++   +K K       D R  + +  K  +K S F+R
Sbjct:    4 TESTFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLYALVLDEADEMLRMGFIEDVETIMSQIPKEHQTALFSATMPEAIRRISKRFMKNPQEIKIQSNITTRPDIKQSYWMVY-GRKTDALIRFLEVEDFSATIIFVKTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTINQTIPEVQLPKIEVLCKRRLERFAKKVQEQLESRDLDEYSALLDKLYSPDDLDIKTLASALLKMAQGGRPLIIK-KDLLQRPSREFSFKD-DRRREDNHRNNNRNRRERRELKD--------------------IDLYRIEAGRNDGVEVRHIVGAIANEGNINSRNIGNIKLFSSYAIVELPKGLSKDLLQRLIKTKILNKKINIKLLRDIKNYETRTHNRSIFNKDKNNKRRFSDNRLNKSSSIKNETKSSFFRR 598          

BLAST of rna helicase vs. SwissProt
Match: gi|1169261|sp|P44586.1|DEAD_HAEIN (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 506.523 bits (1303), Expect = 2.289e-172
Identity = 276/612 (45.10%), Postives = 388/612 (63.40%), Query Frame = 0

Query:    8 SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTE-FCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGGFTG-----GGDKRPKRDAKAGS 613
            +FN+L L   +++ +  +G+E PSPIQ   IP ++ G+DVLG AQTG+GKTAAFALPLL+Q+D +    Q+LV+APTRELAIQVA+A + +    +G  ++ LYGGQ Y  Q+R+LK+G  VVVGTPGR++DH+RRGTLNL  L+ +VLDEADEMLRMGFIDDVE ++ + P+  Q ALFSATMP+ I+RI    +NDPQ + +KV    A  I Q    V G +K + L R LE E+F A IIF RTK  T+D+ + L   G+  A L+GD+ Q+ RE+T+++L+ G LDI+VATDVAARGID+ER++ V+NYDIP D ESYVHRIGRTGRAGR+G A+LFV PRERR+L +IE   K+ I  +ELP+   + E R   F  +I+  L   DL  + ++L + F A+ D +   +AAA+   +QG Q  +L             P    E R RE  +R  R R+  R+ E R  R+             + M+ YR+EVG    V+  +IVGAIANE  I+S++IG I +++D++ ++LP+GMPK+     +   V  +++ +S +            K + S+G   F G     GGD R +R  + G+
Sbjct:    6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQE--NIAAAMLMLLQGKQKLILP------------PDPPMEKRRRERNDRGDR-RENPRSAERRGERKG--------YGNPQPMDLYRIEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFAKTRVLNKQMQMSFL---------GAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGN 585          

BLAST of rna helicase vs. SwissProt
Match: gi|8928554|sp|P33906.3|DEAD_KLEPN (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 501.516 bits (1290), Expect = 6.869e-170
Identity = 274/579 (47.32%), Postives = 377/579 (65.11%), Query Frame = 0

Query:    3 AETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQV---AAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGE 578
            AE  T+F +L L  P+++ L  +GYE PSPIQA+ IP +++G DVLG AQTG+GKTAAF+LPLL+ +D      Q+LVLAPTRELA+QVAEA   ++  M+G +V+ LYGGQ Y  Q+R+L++G  +VVGTPGR++DH++RGTL+L  L  LVLDEADEMLRMGFI+DVE I+ Q P+  Q ALFSATMP+ I+RI    + +PQ + ++   +T   I Q Y    G +K + L R LEAE+F A IIFVRTK AT+++A+ L   GY  A L+GD+ Q  RE+ +E+LK G LDI++ATDVAARG+DVER++ V+NYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IER  K  I  +ELP+ + ++++R   F  ++   L S DL  +  +L +  A  + + + V   AAAL +  QG +  ++         R  R   D   R  +  +R PR    DR  EDRP RE+R     DV      ME YR+EVG +  V+  +IVGAIANE  I S++IG I +    S I+LP+GMP +     +   +  + +N+  + D +
Sbjct:    2 AEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLAKIHATAEGEELDVETLAAALLKMAQGERSLIVPPVAPMRPRREFRDRDDSFDRRGDRNDRGPRG---DR--EDRPKRERR-----DVGD----MELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQ 566          

BLAST of rna helicase vs. SwissProt
Match: gi|71154182|sp|P0A9P7.2|DEAD_ECOL6 (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A >gi|71154193|sp|P0A9P6.2|DEAD_ECOLI RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A; AltName: Full=Translation factor W2 >gi|71154222|sp|P0A9P8.2|DEAD_SHIFL RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 489.189 bits (1258), Expect = 2.702e-165
Identity = 270/579 (46.63%), Postives = 372/579 (64.25%), Query Frame = 0

Query:    3 AETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEF--CAENDIQPVQ-VAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGE 578
            AE  T+F +L L  P+++ L  +GYE PSPIQA+ IP ++ G DVLG AQTG+GKTAAF+LPLL  +D      Q+LVLAPTRELA+QVAEA   ++  M+G +V+ LYGGQ Y  Q+R+L++G  +VVGTPGR++DH++RGTL+L  L  LVLDEADEMLRMGFI+DVE I+ Q P+  Q ALFSATMP+ I+RI    + +PQ + ++   +T   I Q Y  V G +K + L R LEAE+F A IIFVRTK AT+++A+ L   GY  A L+GD+ Q  RE+T+E+LK G LDI++ATDVAARG+DVER++ V+NYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IER  K  I  +ELP+ + + ++R   F  ++   L S DL  +  +L++    AE +   ++ +AAAL +  QG +  ++           D P R +       RE   R     R+  DR PR  R  R          M+ YR+EVG +  V+  +IVGAIANE  I S++IG I +    S I+LP+GMP +     +   +  + +N+  + D +
Sbjct:    2 AEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVP---------PDAPMRPK-------REFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQ 564          

BLAST of rna helicase vs. SwissProt
Match: gi|32171494|sp|Q8XA87.3|DEAD_ECO57 (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 489.189 bits (1258), Expect = 3.145e-165
Identity = 270/579 (46.63%), Postives = 372/579 (64.25%), Query Frame = 0

Query:    3 AETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEF--CAENDIQPVQ-VAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGE 578
            AE  T+F +L L  P+++ L  +GYE PSPIQA+ IP ++ G DVLG AQTG+GKTAAF+LPLL  +D      Q+LVLAPTRELA+QVAEA   ++  M+G +V+ LYGGQ Y  Q+R+L++G  +VVGTPGR++DH++RGTL+L  L  LVLDEADEMLRMGFI+DVE I+ Q P+  Q ALFSATMP+ I+RI    + +PQ + ++   +T   I Q Y  V G +K + L R LEAE+F A IIFVRTK AT+++A+ L   GY  A L+GD+ Q  RE+T+E+LK G LDI++ATDVAARG+DVER++ V+NYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IER  K  I  +ELP+ + + ++R   F  ++   L S DL  +  +L++    AE +   ++ +AAAL +  QG +  ++           D P R +       RE   R     R+  DR PR  R  R          M+ YR+EVG +  V+  +IVGAIANE  I S++IG I +    S I+LP+GMP +     +   +  + +N+  + D +
Sbjct:    2 AEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVP---------PDAPMRPK-------REFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQ 564          

BLAST of rna helicase vs. SwissProt
Match: gi|31340034|sp|Q89AF9.1|DEAD_BUCBP (RecName: Full=ATP-dependent RNA helicase DeaD; AltName: Full=Cold-shock DEAD box protein A)

HSP 1 Score: 480.715 bits (1236), Expect = 2.233e-162
Identity = 263/611 (43.04%), Postives = 383/611 (62.68%), Query Frame = 0

Query:    5 TATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQ-VAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGGFTGGGDKRPKRDAKAGSK 614
            T  +F+   L++ ++  L  +GY  PSPIQA  IP +++G DVLG AQTG+GKTAAFALPLL  + L+    Q+LVL PTRELA+QVAEAF  ++ ++ G HVL LYGGQ Y  Q++SL++G  ++VGTPGR++DH++R TL+L  L +LVLDEADEMLRMGFI+DVE I+ + P + Q ALFSATMP+ I+RI+   + +P+ I ++   +T   I+Q Y +V  G+K D L R LEAE+F A IIFVRTK AT+++++ L   GY  A L+GD+ Q  RE+T+E+LK G LDI++ATDVAARG+DV+R++ VINYDIP D+ESYVHRIGRTGRAGR G A+LFV  RERR+L +IERA    I  + LP +  ++++R   F Q++   L S DL  +  +L +    N+   ++ +AAAL +  QG +  ++            +P      R  + ++    +  +  N+  R  R+K    +VD+         YR++VG    V+  +IVGAIANE  I S+ IG + +  ++S I+LP+G+     N L   ++  + LN  + ++ +++ N        S  KG +    D +     K  SK
Sbjct:    4 TNMTFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHNIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRKGPQIIVGTPGRLLDHLKRRTLSLSNLHSLVLDEADEMLRMGFIEDVETIMTEIPDRHQTALFSATMPEAIRRISRRFMKNPKEIRIQSNITTRPDIQQSYWMVY-GKKTDALIRFLEAEDFSATIIFVRTKNATLEVSEVLERYGYNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVENRERRLLRNIERAMNISISEVNLPKSDFLSKRRLEKFAQKVQIQLDSKDLHEYRGLLPKLQPNNNSLDIESLAAALLKMAQGERSLIV------------KPESIVRARHLKIKDTYRNNNYKSLNYVSRYNRDK----NVDL---------YRIDVGRNDGVEVRHIVGAIANEGDISSRKIGNVRLFSNYSTIELPKGLS----NTLPKTFIRTKILN--KFINIKLLYN--------SNFKGNYNDIKDVKVYNSNKLRSK 574          

BLAST of rna helicase vs. SwissProt
Match: gi|81689748|sp|Q63GX5.1|CSHA_BACCZ (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 400.208 bits (1027), Expect = 4.762e-132
Identity = 206/420 (49.05%), Postives = 281/420 (66.90%), Query Frame = 0

Query:    7 TSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAAL 426
            T+F EL LS  L+Q +E +G+E  +PIQA+ IP  ++G D++GQAQTGTGKTAAF LPLL ++D +   VQ +V+APTRELAIQV E         K   +LP+YGGQ    QIR+LK+  H++VGTPGR++DH+ R TL L  ++T+VLDEADEML MGFI+D+E IL   P+  Q  LFSATMP  I+RIA   + +PQHI VK K  T   I+Q Y  V   +K DVLTR+L+ +     I+F RTK    +L++ L  RGYA   + GD+ Q +R   + + K+G ++++VATDVAARG+D+  VTHV N+DIP D ESYVHRIGRTGRAG+ G A+LFV PRE   L +IER TK+K++ M+ P+     E +     +++  T+ +++L ++  +  E   END   V VAAAL
Sbjct:    2 TTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDSVTV-VAAAL 419          

BLAST of rna helicase vs. SwissProt
Match: gi|81700027|sp|Q73EU1.1|CSHA_BACC1 (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 400.208 bits (1027), Expect = 5.205e-132
Identity = 206/420 (49.05%), Postives = 282/420 (67.14%), Query Frame = 0

Query:    7 TSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAAL 426
            T+F EL LS  L+Q +E +G+E  +PIQA+ IP  ++G D++GQAQTGTGKTAAF LPLL ++D +   VQ +V+APTRELAIQV E         K   +LP+YGGQ    QIR+LK+  H++VGTPGR++DH+ R TL L  ++T+VLDEADEML MGFI+D+E IL   P+  Q  LFSATMP  I+RIA   + +PQHI VK K  T   I+Q Y  V   +K DVLTR+L+ +     I+F RTK    +L++ L  RGYA   + GD+ Q +R   + + K+G ++++VATDVAARG+D+  VTHV N+DIP D ESYVHRIGRTGRAG+ G A+LFV PRE   L +IER TK+K++ M+ P+     E +     +++ +T+ +++L ++  +  E   END   V VAAAL
Sbjct:    2 TTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENENLAYYKRIAEEMLEENDSVTV-VAAAL 419          

BLAST of rna helicase vs. nr
Match: gi|1154109999|ref|WP_078485731.1| (ATP-dependent RNA helicase [Solemya elarraichensis gill symbiont] >gi|1152919882|gb|OOZ37658.1| ATP-dependent RNA helicase [Solemya elarraichensis gill symbiont])

HSP 1 Score: 771.155 bits (1990), Expect = 0.000e+0
Identity = 374/574 (65.16%), Postives = 461/574 (80.31%), Query Frame = 0

Query:    6 ATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKP-RSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGE 578
            A  F +L L+ P+++ L+ VGYE PSPIQAQ IP I+ G D+LGQAQTGTGKTAAFALPLLS++DL+ +  QVLVLAPTRELAIQVAEAFQ YAA MKGFHVLP+YGGQ Y  Q+R LKRGVHVVVGTPGRVMDHMR+G+L L  L TLVLDEADEMLRMGFIDDVEWILEQTPK+RQIALFSATMP  I+RIA  HLNDP+ I +KVKT+TAETIRQRY +V+G  KLD LTRILEAE F  II FVRTK AT++LA+KL ARGYA APL+GD+ QK RERT+E+LK G LDI+VATDVAARG+DVER++HVINYDIP+DTE+YVHRIGRTGRAGR+GDAILFVAPRERR+L +IE+AT+++IELMELPS + IN+KR   FK +I+DTLA+++L FF  ++ ++  E++I  +++AAALA+ +QG QP +L +K  S KP R ++  R ++ R+ + RER+P+ ++                        EEGMER+R+EVGH H+VKPGNIVGAIANEAG++S++IG I I +D+SL+DLPEGMP D F+DL   WV GQKLNISR+ + +
Sbjct:    8 APGFRDLALTEPVLKALDDVGYETPSPIQAQTIPHILSGSDLLGQAQTGTGKTAAFALPLLSRIDLSRAEPQVLVLAPTRELAIQVAEAFQRYAAHMKGFHVLPIYGGQDYRVQLRPLKRGVHVVVGTPGRVMDHMRKGSLKLDGLSTLVLDEADEMLRMGFIDDVEWILEQTPKQRQIALFSATMPSVIRRIAQKHLNDPEEITIKVKTTTAETIRQRYWLVSGLHKLDALTRILEAEPFDGIITFVRTKTATIELAEKLQARGYATAPLNGDIAQKDRERTVEKLKAGKLDILVATDVAARGLDVERISHVINYDIPYDTEAYVHRIGRTGRAGRSGDAILFVAPRERRLLRAIEKATRKQIELMELPSAEIINDKRIARFKDQITDTLATEELGFFYQLMEQYQQEHNISALEIAAALAKLVQGDQPMLLSNK--SEKPRRREKENRSQDERQEKRRERSPKVQEH---------------------PVEEGMERFRIEVGHNHEVKPGNIVGAIANEAGLESQYIGHIKIFDDYSLVDLPEGMPNDIFSDLKKTWVCGQKLNISRVAESQ 558          

BLAST of rna helicase vs. nr
Match: gi|1247433590|gb|PCI92057.1| (ATP-dependent RNA helicase [Ectothiorhodospiraceae bacterium])

HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0
Identity = 382/618 (61.81%), Postives = 475/618 (76.86%), Query Frame = 0

Query:    1 MTAETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHK----DFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGGFTGGGDKRPKRDAKAGSK 614
            MT +T T+F +L L TPL++ L  VGYE PSPIQA  IPL+++G D++GQAQTGTGKTAAFALPL+S +DL     QVLVL PTRELAIQVAEAFQ YA  MKGFHVLP+YGGQ Y GQIRSL+RGVHVVVGTPGRVMDHMRRGT+ L  LK LVLDEADEMLRMGFIDDVEW+LEQTP +RQIALFSATMP QI+ IA  +LN+P+ + +KVKT+TAETIRQR+  V+G  KLD  TRILEAE F A+I+FVRTK ATV+LA+KL ARGY+ APL+GD+ Q QRE+TI +LK+  LDI+VATDVAARG+DVERV+HVINYDIP+DTE+Y+HRIGRTGRAGR+G+AILFVAPRE+R+L SIE+ATK+KIE MELPST+ IN+KR   FKQRI+DT+A++++  F  M+ ++  E+++  +++AAALAQ +QG  PF+LE+K       +  + DRP+ ++   +R  R+ +PR   ++       PR++R PR  D+    +G+ERYR+EVGH HDV+PGNIVGAIANEAG+D KHIG I IH+DFS +DLPEGMPK+ F DL    VAG+ L I+R  D E     +  KP   K     T   +KR K   K  SK
Sbjct:    1 MTTDTVTTFEQLALKTPLLKALNDVGYESPSPIQAATIPLLLDGRDIIGQAQTGTGKTAAFALPLISNIDLKQKDPQVLVLTPTRELAIQVAEAFQKYARHMKGFHVLPIYGGQDYRGQIRSLQRGVHVVVGTPGRVMDHMRRGTMKLDNLKALVLDEADEMLRMGFIDDVEWVLEQTPSERQIALFSATMPSQIRHIATKYLNNPEQVTIKVKTATAETIRQRFWPVSGLHKLDAXTRILEAESFDAMIVFVRTKTATVELAEKLQARGYSAAPLNGDIQQSQREKTITRLKRSQLDILVATDVAARGLDVERVSHVINYDIPYDTEAYIHRIGRTGRAGRSGEAILFVAPREKRLLYSIEQATKKKIERMELPSTEIINDKRIDKFKQRITDTIATEEMGMFYQMVEQYQQEHNVPALEIAAALAQLLQGDSPFLLENKPQRQSRDSWDKDDRPSXNKRGDKRGDRQGSPRGSKREGTEGKVRPRKERAPRK-DMPPA-DGLERYRIEVGHNHDVQPGNIVGAIANEAGLDGKHIGHIKIHDDFSYVDLPEGMPKEVFQDLIKVRVAGRALKITR-ADAEGKTATAGDKPVTKKASASKT---EKRTKLKVKPKSK 612          

BLAST of rna helicase vs. nr
Match: gi|1247345781|gb|PCI07662.1| (ATP-dependent RNA helicase [Gammaproteobacteria bacterium])

HSP 1 Score: 765.763 bits (1976), Expect = 0.000e+0
Identity = 382/616 (62.01%), Postives = 477/616 (77.44%), Query Frame = 0

Query:    1 MTAETAT----SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRE----------------RAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGG 596
            M+A+T+T    +FN+L L+  ++++L+++GYE PSPIQ QAIPL+++G D++GQAQTGTGKTAAFALPL+S MD+     Q+LVLAPTRELAIQVAEAFQ YA  MKGFHVLP+YGG  Y+GQIR+LKRGVHVVVGTPGRVMDH+R+GTL LG L+ LVLDEADEMLRMGFIDDVEWILEQTP  RQIALFSATMP QI+RIA ++LN+P+ + +K KT+T +TIRQR+  V+G  KLD LTRILEAEEF AI+IFVRTK +TV+L+DKL+ARGY+ A L+GD+ Q QRERTI+ LK G +DI+VATDVAARG+DVER++HVINYD+PHDTESYVHRIGRTGRAGR GDAILFVAPRE+RML+SIERAT+QKIE+MELPST+ IN+KR   FKQ I+DTLA+DDL  F+ ++ ++  E++I  +++AAALA+Q+QG   F+L     SNKP          PR++++RE                R  R RD DR+  +R PR +R PR    T  +EGM+RYR+EVGH H+VKPGNIVGAIANEA I+SK+IGRI I++D S +DLPE MPK+    L   WV+GQ+L IS   +G     R  +    SK  GG
Sbjct:    1 MSADTSTGVSTTFNDLNLNNSILKILDEIGYESPSPIQEQAIPLLLDGRDIIGQAQTGTGKTAAFALPLISNMDIKQKDPQLLVLAPTRELAIQVAEAFQKYATYMKGFHVLPVYGGADYSGQIRALKRGVHVVVGTPGRVMDHIRKGTLKLGGLRALVLDEADEMLRMGFIDDVEWILEQTPDDRQIALFSATMPSQIRRIATNYLNNPEQVTIKAKTATIDTIRQRFWPVSGVHKLDALTRILEAEEFSAILIFVRTKNSTVELSDKLSARGYSSAALNGDIAQNQRERTIQNLKNGKVDIVVATDVAARGLDVERISHVINYDVPHDTESYVHRIGRTGRAGRKGDAILFVAPREKRMLNSIERATRQKIEMMELPSTEIINDKRISKFKQSITDTLANDDLNMFSQLIEQYQQEHNIPALEIAAALAKQLQGGTDFLL-----SNKP----------PRKQKNREDWDRDDRGNRDRSRRDRPGRERD-DRS--ERAPRRERKPRD---TALDEGMQRYRIEVGHNHEVKPGNIVGAIANEADIESKYIGRICIYDDHSTVDLPENMPKELLYTLKKVWVSGQQLKIS--PEGNSGEARKPAAKQFSKNAGG 593          

BLAST of rna helicase vs. nr
Match: gi|1247533225|gb|PCJ88522.1| (ATP-dependent RNA helicase [Thiotrichaceae bacterium])

HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0
Identity = 384/607 (63.26%), Postives = 471/607 (77.59%), Query Frame = 0

Query:    2 TAETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRSKSKPNASKGKGGFTGGGDKRPKRD 608
            +A+ + +F +L L+  L+++L++VGYE PSPIQAQAIPL++EG D++GQAQTGTGKTAAFALPL+S MD+     Q+LVLAPTRELAIQVAEAFQ YA  MKGFHVLP+YGG  Y+GQIRSLKRGVHVVVGTPGRVMDH+R+GTL LG L  LVLDEADEMLRMGFIDDVEWILEQTP  RQIALFSATMP QI+RIA  +L+DP  + +K KTST ETIRQR+  V+G  KLD LTRILEAEEF A+IIFVRTK +TV+L+DKL+ARGYA APL+GD+ Q  RERTI+ LK G LDIIVATDVAARG+DVER++HV+NYD+PHDTESYVHRIGRTGRAGRTGDAILFVAPRE+RML+SIERATKQKIE+MELPST+ IN+KR   FKQ I+DTLA +DL+ ++ ++ ++  E++I  +++AAALA+Q+QG   F+L     +NKP+  + +RD   +    R+   R     R   +R  R  R  R    T  +EGM+RYR+EVGH+H+VKPGNIVGAIANEA I+SK+IGRI I++  S +DLPEGMPK+    L   WV+GQ+L ISR  D +    +   KP A K  GG +    K   RD
Sbjct:    6 SADVSITFADLALNKSLLKILDEVGYESPSPIQAQAIPLLLEGRDIIGQAQTGTGKTAAFALPLISNMDMKQKDPQLLVLAPTRELAIQVAEAFQKYATHMKGFHVLPVYGGSDYSGQIRSLKRGVHVVVGTPGRVMDHIRKGTLKLGNLSALVLDEADEMLRMGFIDDVEWILEQTPDDRQIALFSATMPSQIRRIATKYLSDPAQVTIKTKTSTVETIRQRFWPVSGVHKLDALTRILEAEEFAAMIIFVRTKNSTVELSDKLSARGYASAPLNGDIAQNLRERTIKNLKSGKLDIIVATDVAARGLDVERISHVVNYDVPHDTESYVHRIGRTGRAGRTGDAILFVAPREKRMLNSIERATKQKIEMMELPSTEIINDKRINKFKQNITDTLAKEDLSLYSQLIEQYQQEHNIPALEIAAALARQIQGDADFLL-----TNKPQRKKQSRDDWDKNDRGRDDRSRRDRPGRERPERSERSPRRERQPRDTALDEGMDRYRIEVGHDHEVKPGNIVGAIANEADIESKYIGRICIYDSHSTVDLPEGMPKEMLYTLKKVWVSGQQLKISRDGDSKDEGQQGSKKP-AVKFAGGQSKDKKKSKGRD 606          

BLAST of rna helicase vs. nr
Match: gi|931405602|gb|KPJ93594.1| (RNA helicase [Gammaproteobacteria bacterium SG8_15])

HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0
Identity = 376/594 (63.30%), Postives = 465/594 (78.28%), Query Frame = 0

Query:    1 MTAETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHK--------DFSNKPRSDRPTRDREPRERESRERAPRSRD----QDRNFEDRPPR----------EKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNIS 572
            M     T+F++L L+  ++  L  VGYE PSPIQAQ IP+++EG DVLGQAQTGTGKTAAFALPLLS++DL+    QVLVLAPTRELAIQVAEAFQ YA  ++GFHVLP+YGGQ Y  QIR+L+RGVHVVVGTPGRVMDHMRRGTL L  L TLVLDEADEMLRMGFI+DVEWILEQTP  RQIALFSATMPQQI+RIA+ +LN+P  I +KVKT+TAETIRQRY  V+G  KLD LTRILEAE F A+I+FVRT+ ATV+LA+KL ARGYA A L+GD+ Q  RERTIEQLK+G LDI+VATDVAARG+DVERV+HV+NYDIP+DTE+YVHRIGRTGRAGR GDAILFVAPRE+ +L +IE+AT++KI++M+LPST+ IN+KR   FKQRI+DTL+++DL  F  ++ ++  E+++  +++AAALA  +QG  P +L++K        DF  K   D+  RDR  R++++R +  R +D     DR   ++P R           +R PR    +  E+GM RYR+EVGHEH+VKPGNIVGAIANEAGIDS++IGRIDIH+ +S +DLPEGMPK  F  L   WVAGQ++NIS
Sbjct:    1 MAFRNITAFHQLALNKSILNALNDVGYETPSPIQAQTIPIVLEGKDVLGQAQTGTGKTAAFALPLLSKLDLHQKEPQVLVLAPTRELAIQVAEAFQKYAKYLQGFHVLPIYGGQDYRAQIRALQRGVHVVVGTPGRVMDHMRRGTLKLDNLTTLVLDEADEMLRMGFIEDVEWILEQTPPTRQIALFSATMPQQIRRIASKYLNEPAQITIKVKTTTAETIRQRYWPVSGVHKLDALTRILEAESFDAMIVFVRTRTATVELAEKLEARGYASAALNGDIPQNLRERTIEQLKQGKLDILVATDVAARGLDVERVSHVVNYDIPYDTEAYVHRIGRTGRAGREGDAILFVAPREKHLLHAIEKATRKKIDIMDLPSTELINDKRITRFKQRITDTLSTEDLGQFHQLIEQYQQEHNVPALEIAAALAHLLQGDSPLLLQNKPQARAKDEDFRGKDSRDKNVRDRGFRDKDNRGKDFRGKDVRGKDDRTSRNKPARADRSEGTLKERERAPRK--ESALEKGMVRYRVEVGHEHNVKPGNIVGAIANEAGIDSQYIGRIDIHDSYSTVDLPEGMPKTIFKALKKAWVAGQQMNIS 592          

BLAST of rna helicase vs. nr
Match: gi|1247421381|gb|PCI80249.1| (ATP-dependent RNA helicase [SAR86 cluster bacterium])

HSP 1 Score: 758.444 bits (1957), Expect = 0.000e+0
Identity = 382/601 (63.56%), Postives = 466/601 (77.54%), Query Frame = 0

Query:    1 MTAETATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKP--RSDRPTRDREPRER-ESRERAP-------------------RSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRI-VDGE 578
            M++E  TSF ++ L+ PL++ L  VGYE PSPIQAQ IPL++EG DVLGQAQTGTGKTAAFALP+LS++DL     QVLVLAPTRELAIQVAEAFQ YA  +KGFHVLP+YGGQ Y+GQIR+LKRGVHVVVGTPGRVMDHMRRGTL L  L TLVLDEADEMLRMGFIDDVEWILEQTP +RQIALFSATMP QI+RIA  +LNDP  + VK+KT+TAE+IRQR+  V+G  KLD LTRILEAE F A++IFVRT++ TVDLA+KL+ARG++   L+GD+ QK RERTIE+LKKG LDI+VATDVAARG+DV+R++HV+NYDIPHDTESY+HRIGRTGRAGR GDAILFVAPRE+RML++IERAT +KIE+MELPSTQ IN+KR   FKQ IS+T+A++DL+ +  +L +F AEN+   + +AAALA+  QG  P +L+     NKP  +S++  R+ E   R  SR R P                   R R + R+   RP R    P        E+GMER+RLEVGH HDV PGNIVGAIANEAG+D++HIGRI+I +D S +DLP+ MP + F +L N WV+GQ L ISR+ +DG+
Sbjct:    1 MSSEEITSFEQMALTKPLLKSLIDVGYETPSPIQAQTIPLLLEGRDVLGQAQTGTGKTAAFALPILSKLDLKQKDPQVLVLAPTRELAIQVAEAFQKYATHIKGFHVLPVYGGQDYSGQIRALKRGVHVVVGTPGRVMDHMRRGTLKLNQLSTLVLDEADEMLRMGFIDDVEWILEQTPSERQIALFSATMPTQIRRIATKYLNDPVQVTVKMKTATAESIRQRFWPVSGMHKLDALTRILEAETFDAMLIFVRTRILTVDLAEKLSARGFSATALNGDIAQKTRERTIERLKKGQLDILVATDVAARGLDVDRISHVVNYDIPHDTESYIHRIGRTGRAGREGDAILFVAPREKRMLAAIERATNKKIEMMELPSTQLINDKRIEQFKQSISETIANEDLSQYTKLLEKFEAENEFPMLGIAAALAKLSQGGTPLLLQ-----NKPMRKSEKFKREDEGDSRGRSRSRPPTGERSHRSESRSRPPTDDNRHRSESRS---RPTRADSPP--------EKGMERFRLEVGHNHDVMPGNIVGAIANEAGLDAQHIGRINIFDDHSTVDLPDDMPDEIFKELKNVWVSGQTLKISRLTMDGK 585          

BLAST of rna helicase vs. nr
Match: gi|1059903812|ref|WP_069005662.1| (ATP-dependent RNA helicase [Candidatus Thiodiazotropha endoloripes] >gi|1058376088|gb|ODB85887.1| ATP-dependent RNA helicase [Candidatus Thiodiazotropha endoloripes] >gi|1058376679|gb|ODB86476.1| ATP-dependent RNA helicase [Candidatus Thiodiazotropha endoloripes] >gi|1058378710|gb|ODB88505.1| ATP-dependent RNA helicase [Candidatus Thiodiazotropha endoloripes] >gi|1058387832|gb|ODB97595.1| ATP-dependent RNA helicase [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0
Identity = 362/579 (62.52%), Postives = 446/579 (77.03%), Query Frame = 0

Query:    6 ATSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEMVANRS 584
            ATSFNE  L   L+  L+KVGYE PSPIQAQ IP ++ G D+LG A TGTGKTAAFALPLL++++L    VQV+VL PTRELAIQVAEAFQ YA++M+ FHVLP+YGGQ Y GQIR LKRGVHVVVGTPGRVMDHMR+GTL L  ++TLVLDEADEMLRMGFIDDVEWILEQT  +RQIALFSATMP++I+ IA  HLN P  I +K KT+TAETIRQRY +V G  KLD LTRILE E F AIIIFVRTK AT +LA++L+ARGY+ A L+GD+VQKQRE+ +E+LK+G LDI+VATDVAARG+DVER++HVIN+DIP+D ESYVHRIGRTGRAGRTGDAILFVAPRERRML +IE++T+QKIE + LPST+ +N +R  AFKQRISDTLAS++L F   +L ++  E+D+  + +AAALA+   G +P +L+ +   ++P++  P+R+R  +   S +++                       V  +    GMER+R+EVGH+HDVKPGNIVGAIANEAG+D++HIG IDI  DFSL+DLP GMP + F DL   WV GQ+L ISR+   E  A RS
Sbjct:    8 ATSFNEFDLPKQLLSALDKVGYETPSPIQAQTIPYLLAGDDLLGHAPTGTGKTAAFALPLLARLNLKQRHVQVMVLTPTRELAIQVAEAFQRYASQMQDFHVLPIYGGQDYGGQIRQLKRGVHVVVGTPGRVMDHMRKGTLKLDNIQTLVLDEADEMLRMGFIDDVEWILEQTNPERQIALFSATMPKEIRHIARRHLNQPHEIAIKSKTATAETIRQRYWLVKGLHKLDALTRILEVEPFDAIIIFVRTKTATTELAERLSARGYSAAALNGDMVQKQREQMVERLKRGALDILVATDVAARGLDVERISHVINFDIPYDAESYVHRIGRTGRAGRTGDAILFVAPRERRMLGTIEKSTRQKIEQLTLPSTETVNNQRIAAFKQRISDTLASEELDFMQGLLEQYQQEHDVPAIDIAAALAKMSLGDKPLLLQAE--KSRPKNSEPSRERNSKRVRSDQKS----------------------HVTSSAAPSGMERFRIEVGHDHDVKPGNIVGAIANEAGLDAEHIGHIDIQNDFSLVDLPVGMPHEIFQDLRKAWVCGQRLKISRLAKAEKPAKRS 562          

BLAST of rna helicase vs. nr
Match: gi|1247485256|gb|PCJ41801.1| (ATP-dependent RNA helicase [SAR86 cluster bacterium] >gi|1247487299|gb|PCJ43822.1| ATP-dependent RNA helicase [SAR86 cluster bacterium])

HSP 1 Score: 742.651 bits (1916), Expect = 0.000e+0
Identity = 377/602 (62.62%), Postives = 463/602 (76.91%), Query Frame = 0

Query:    1 MTAETAT-----SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLAS-DDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNF-EDRPPREKRLPRSVD---VTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIV----DGEMVANRSKSKP 588
            MT  +AT     +F +L  +  L+++L ++GYEHP+PIQA+ IPLI EGHDVLGQAQTGTGKTAAFALPLLS++DL     QVLVLAPTRELAIQVAEAFQ YA  +KGFHVLP+YGGQ Y+ QIR+L+RGVHVVVGTPGRVMDHMR+GTL L  L TLVLDEADEMLRMGFIDDVEWILEQ P++ Q ALFSATMP+QI+ IA  +LN+P+ I +KVKTSTAETIRQRY  V+G  KLD LTRILEAE F  +IIFVRT++ATV+LA+KL+ARGY  A L+GD+ Q QRERTI+ LK+G +DI+VATDVAARG+DVER++HVINYD+P+DTE+YVHRIGRTGRAGR GDAILFVAPRERRML +IERAT+ KIELMELPST+ IN KR   FKQ ISDTLA+ DDL F+  +L ++  E+++  + VA ALA+ ++G +P +L                 ++ +++ES       R QD+ F E   PR KR  R+ D   + + E GM+RYRLEVGH H VKPGNIVGAIANEA I+SKHIGRI+I E++S++DLPEGMPK+    L N +V+G+K+ IS        G+ V + SK KP
Sbjct:    1 MTETSATKTPTVAFEQLVANPSLLKILNELGYEHPTPIQAETIPLIAEGHDVLGQAQTGTGKTAAFALPLLSKLDLKQKEPQVLVLAPTRELAIQVAEAFQHYATYIKGFHVLPVYGGQDYSAQIRALRRGVHVVVGTPGRVMDHMRKGTLQLHKLSTLVLDEADEMLRMGFIDDVEWILEQCPEQHQTALFSATMPKQIRHIAEKYLNNPKQITIKVKTSTAETIRQRYWPVSGLHKLDALTRILEAETFDGVIIFVRTRIATVELAEKLSARGYIAAALNGDIPQNQRERTIQNLKRGKIDILVATDVAARGLDVERISHVINYDVPYDTEAYVHRIGRTGRAGREGDAILFVAPRERRMLQAIERATRSKIELMELPSTEIINNKRIAKFKQDISDTLANDDDLQFYRDILEQYQFEHNVPALDVATALAKLLRGDKPLLL-----------------KKEQKKES------FRKQDKEFREHNKPRSKR--RTNDERFMKSIEPGMQRYRLEVGHNHKVKPGNIVGAIANEADIESKHIGRINIFEEYSVVDLPEGMPKEILQHLKNTYVSGRKIEISEYKPEKDQGKPVKSNSKRKP 577          

BLAST of rna helicase vs. nr
Match: gi|954628411|gb|ALP53495.1| (RNA helicase [Candidatus Tenderia electrophaga])

HSP 1 Score: 742.651 bits (1916), Expect = 0.000e+0
Identity = 368/586 (62.80%), Postives = 453/586 (77.30%), Query Frame = 0

Query:    8 SFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRI---VDGEMVANRSKSKPNA 590
            SF+EL L+  ++Q + +VGYE PSPIQA+ IP +++G DVLGQAQTGTGKTAAFALPLLS++DL     QVLVLAPTRELAIQVAEAFQTYA+ MKGFHV P+YGGQ Y  QIR LKRGVHVVVGTPGRVMDHMR+GTL L  L TLVLDEADEMLRMGFIDDVEW+LEQTP KRQ+ALFSATMP  I++IA  HLN+P+ I +KVKT+TAETIRQRY +V+G  KLD LTR+LE E F  +++FVRTK A  +LA+KL ARG+A A L+GD++QKQRERT+EQLK G LDI+VATDV ARG+DVER+THVINYDIP+DTESY HRIGRTGRAGR GDAILFVAPRE+RML +IE+AT+QKIE +ELPST  IN+KR   F QRI+DTL+ ++L FF  ++  +  E+++  +++AAALA+ +QG QP +L+ +       +  PT+     ER  + R P+S   +R  +  PP              E GM R+RLEVGH+  VKPGNIVGAIANEAG+DS+HIGRI+I +D+SL+DLPEGMPKD FNDL   WVAG++L +S+      G   + + KSK +A
Sbjct:   10 SFSELGLNPSVLQAVIEVGYETPSPIQAETIPYLLQGRDVLGQAQTGTGKTAAFALPLLSRIDLKRLAPQVLVLAPTRELAIQVAEAFQTYASNMKGFHVAPIYGGQSYETQIRQLKRGVHVVVGTPGRVMDHMRKGTLKLDGLSTLVLDEADEMLRMGFIDDVEWVLEQTPPKRQVALFSATMPAVIRKIAERHLNNPEQITIKVKTTTAETIRQRYWMVSGLHKLDALTRLLEVESFDGMLVFVRTKNAAAELAEKLEARGHAAAALTGDMIQKQRERTVEQLKSGKLDILVATDVVARGLDVERITHVINYDIPYDTESYTHRIGRTGRAGRKGDAILFVAPREKRMLHTIEKATRQKIEQVELPSTATINDKRIERFNQRITDTLSENNLEFFQQLMENYQQEHNVPALEIAAALAKMVQGNQPLLLKERQIP----APHPTKSFAQGERPDK-RKPKS---ERPKKSGPP--------------EAGMVRFRLEVGHKDKVKPGNIVGAIANEAGLDSEHIGRIEIFDDYSLVDLPEGMPKDVFNDLHKAWVAGKQLRVSKFGQDTPGRDFSAKGKSKKHA 573          

BLAST of rna helicase vs. nr
Match: gi|1060732879|ref|WP_069128287.1| (ATP-dependent RNA helicase [Candidatus Thiodiazotropha endolucinida] >gi|1060269006|gb|ODJ85795.1| ATP-dependent RNA helicase DeaD [Candidatus Thiodiazotropha endolucinida])

HSP 1 Score: 741.11 bits (1912), Expect = 0.000e+0
Identity = 366/587 (62.35%), Postives = 450/587 (76.66%), Query Frame = 0

Query:    7 TSFNELKLSTPLMQVLEKVGYEHPSPIQAQAIPLIMEGHDVLGQAQTGTGKTAAFALPLLSQMDLNASGVQVLVLAPTRELAIQVAEAFQTYAAEMKGFHVLPLYGGQPYTGQIRSLKRGVHVVVGTPGRVMDHMRRGTLNLGALKTLVLDEADEMLRMGFIDDVEWILEQTPKKRQIALFSATMPQQIKRIANSHLNDPQHIMVKVKTSTAETIRQRYQIVAGGQKLDVLTRILEAEEFGAIIIFVRTKLATVDLADKLAARGYAVAPLSGDVVQKQRERTIEQLKKGGLDIIVATDVAARGIDVERVTHVINYDIPHDTESYVHRIGRTGRAGRTGDAILFVAPRERRMLSSIERATKQKIELMELPSTQAINEKRTVAFKQRISDTLASDDLTFFATMLTEFCAENDIQPVQVAAALAQQMQGAQPFMLEHKDFSNKPRSDRPTRDREPRERESRERAPRSRDQDRNFEDRPPREKRLPRSVDVTTTEEGMERYRLEVGHEHDVKPGNIVGAIANEAGIDSKHIGRIDIHEDFSLIDLPEGMPKDTFNDLSNCWVAGQKLNISRIVDGEM-------VANRSKS 586
            +SF +L L  PL++ L++VGYE PSPIQAQ IP ++EG D+LG A TGTGKTAAFALPLLS++D     VQVLVL PTRELAIQVAEAFQ YAA +KGFHVLP+YGGQ Y+GQIR LKRGVHVVVGTPGRVMDHMR+GTL L  L+ LVLDEADEMLRMGFIDDVEWILEQ P+  Q ALFSATMP++I+ IA  HLN+P  I +K +T+TA+TIRQRY  V+G  KLD LTRILE E F AIIIFVRTK AT +LA++L ARGYA A L+GD+VQKQRE+ +E+LK+G LDI+VATDVAARG+DVER++HVINYDIPHDTE+Y+HRIGRTGRAGR GDAILFVAPRERRML +IERAT+QKI  +ELP+T+ +N KR   FKQRISDT+A+ +L F  ++L +F  E+D+  +++AAALA+   G Q  +L       KP  +RP R    R+ ES+ +  ++  + R  + RP                 GMER+R++VGH+H VKPGNIVGAIANEAG+D+++IG IDIH+DFSL+DLP G+PKD + DL   WV GQ+LNISR+   +M       V  R+KS
Sbjct:    9 SSFRDLNLPKPLLKALDEVGYETPSPIQAQTIPYMLEGRDLLGHAPTGTGKTAAFALPLLSRLDTKQHNVQVLVLTPTRELAIQVAEAFQRYAAHIKGFHVLPVYGGQDYSGQIRQLKRGVHVVVGTPGRVMDHMRKGTLKLDRLQALVLDEADEMLRMGFIDDVEWILEQVPEVHQTALFSATMPKEIQHIARHHLNNPCEIAIKTRTATADTIRQRYWQVSGLHKLDALTRILEVETFDAIIIFVRTKTATSELAERLEARGYAAAALNGDMVQKQREQMVERLKRGSLDILVATDVAARGLDVERISHVINYDIPHDTEAYIHRIGRTGRAGRIGDAILFVAPRERRMLKAIERATRQKIASLELPTTEMVNNKRIANFKQRISDTIATGELEFMQSLLEQFQQEHDVPALEIAAALAKLSMGDQSLLL-------KPERERPAR----RDTESKSQRGKNEKRQRKPQTRPA---------------NGMERFRIDVGHQHQVKPGNIVGAIANEAGLDAQYIGHIDIHDDFSLVDLPVGIPKDIYQDLKRAWVCGQRLNISRLEQPKMGKKGPRKVKKRNKS 569