helicase snf2, snap_masked-scaffold2_size2283618-processed-gene-7.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000008498 (supercontig:LSalAtl2s:LSalAtl2s524:101535:104062:-1 gene:EMLSAG00000008498 transcript:EMLSAT00000008498 description:"maker-LSalAtl2s524-augustus-gene-1.41") HSP 1 Score: 239.58 bits (610), Expect = 3.777e-66 Identity = 171/566 (30.21%), Postives = 263/566 (46.47%), Query Frame = 0 Query: 837 QQEKLQEARELELQLPSTL-GAQLRDYQFAGFDWMMRLAHWEAG--ACLADDMGLGKTVQILAV---LLARAEDGPALVLAPTSVCTNWINEAARFAPTL-----------RMHRFGDGDRTAMISGL--GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQF----ISPMEHGDQYAKQR-------LKALVAPFILRRHKSQVLTELPSRTE------------------INRVVEA--------------------SEEEKAFYEALRRQALDDL-----------AAPEEATGNQR---------FKILAEITRLRRACCHPRLVSPAVDIEGS-------------KLKELMNIVEEL-VDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAA 1299 ++ +L E +E+ P + G +RDYQ GF WM L WE G LAD+MGLGKT+Q +++ L+ +GP LV+AP S NW+NE RF P + R F A ++G+ G + V V+SY ++ + L + W ++ DE LKN + K + +++ TGTP++N++ ELWSL + P + F+ F I E+ +R L +++PF+LRR KS + ++P + E IN+ ++ +K +Y L ++DD + +TG QR F LR+ HP L+ + +G+ KLK L ++ EL V HK L+FSQ L ++ L QG ++ LDGS +++RQ + +F + +IFL+S +AGG G+NLTAAD VI D WNP + QA DR HR+GQ RPV IYRL+ A TI+E+I+ + KR L ++ +E + Sbjct: 167 KKHRLFEGKEIPDDQPLLVKGGIMRDYQIKGFQWMCSL--WENGINGILADEMGLGKTIQTISLFAHLIEMGVEGPFLVVAPLSTLGNWVNEFKRFTPDIPVVLFHGNLEKRKELFRRLKDVAHVTGIRGGIKSVFVTSYEIILNSRKLFKNMNWKYIVVDEGHRLKNFKCRLIKELKMYHTANKLLLTGTPLQNNMAELWSLLNFLMPEIFNDLNMFQSWFSVEKIQANENDSISMSERETKVLTTLHQILSPFLLRRIKSDIELKIPPKKEVLVYCPMTAYQTNLYKATINKTLKTLLEDSETSDSSSKEDLIRSNRRPKKMYYSELNDASIDDTINRRNEAMVWKNGVDVSTGCQRNAPRNSVLNFSNKNITMDLRKITNHPYLIEYPLSEDGNFYRSDKDMIDACGKLKVLDQLLNELIVKRNHKVLIFSQMTKMLDILEDYLQLQGFSHVRLDGSMKLEERQENIHNFSSSSDLNIFLLSTRAGGLGINLTAADTVIIYDSDWNPQQDLQAQDRCHRIGQTRPVMIYRLVTANTIDERIVQIASSKRRLEKMVIHEKEFKS 730
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000001280 (supercontig:LSalAtl2s:LSalAtl2s1211:177823:184435:1 gene:EMLSAG00000001280 transcript:EMLSAT00000001280 description:"augustus_masked-LSalAtl2s1211-processed-gene-1.3") HSP 1 Score: 244.202 bits (622), Expect = 1.234e-65 Identity = 173/562 (30.78%), Postives = 267/562 (47.51%), Query Frame = 0 Query: 801 LADFADDDGRFHPLASGAIAELTQDM---LGESSSEWNLQQ------EKLQEARELELQLPSTLGAQ-------------LRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA--------RAEDGPALVLAPTSVCTNWINEAARFAP----TLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPM------------EHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALR-RQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSK----------LKELM-----NIVEE-----LVDNGHKALVFSQFVDHLKLIRTALDKQ---GVNYQYLDGSTTVKKRQAAVDDFQAGKG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSL 1291 L +D D + LAS A L + M G E N EK + R+ QL A+ LR YQ +G +W+ L ++ L DDMGLGKT+Q + +L E+ P+LV+ P ++ +W E +F + ++ +R++ + + +++++SY ++ + L ++WN +I DE +KN +A + A +L++N R+I +GTPI+N + E+WSLF + PG LG++++F +F P+ + A + L + PF+LRR K VL +LP + + + S + YE +Q LDDL + I + LR+ C HP+LVS + + S+ LKEL+ IVE + + H+AL+F Q + ++ L K V Y LDGS R V F DI L+S GG GLNLT AD VI + WNP + QA DRAHR+GQ + V +YRLI TIEEKIL L + K + A+++ Sbjct: 1050 LGRMSDTDSQVRLLASNCFATLVRLMPLDSGXXDKEXNCDLFSKEILEKKKSERKFIHQLMDAKNAEYFHIPERVMDTELLRSYQRSGVNWLAFLNRYKLHGILCDDMGLGKTLQSICILAGDHYNRINQNMENIPSLVICPPTLRWHWKEEILKFTKGKFLSPLLYNGNTVNRSSTRTFIEKNNILITSYDIVRKDIEFLKEIKWNYIILDEGHIIKNAKAKTTIAIKSLSSNHRLILSGTPIQNSVLEIWSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLHRQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEYTLKQKLDDLDX-NSIKPTSKSHIFQALQYLRKVCNHPKLVSNELSVTQSQDISVAAKLPALKELLLECGIGIVEGEDNQLCLASQHRALIFFQLKSMIDIVENDLLKNLMPSVTYLRLDGSVPTNMRHEIVQRFNNDVSIDILLLSTSVGGLGLNLTGADTVIFAEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTIEEKILGLQKFKLKTANTV 1610
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000011974 (supercontig:LSalAtl2s:LSalAtl2s851:141371:144613:-1 gene:EMLSAG00000011974 transcript:EMLSAT00000011974 description:"maker-LSalAtl2s851-augustus-gene-0.6") HSP 1 Score: 240.736 bits (613), Expect = 2.414e-65 Identity = 156/494 (31.58%), Postives = 250/494 (50.61%), Query Frame = 0 Query: 849 LQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAED---GPALVLAPTSVCTNWINEAARFAPTLRMHRFGDG------DRTAMISGL-GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQR------------LKALVAPFILRRHKSQVLT--ELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGS---KLKELMNIVEELVD----NGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD-IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 L++P + ++L YQ W+ L + G L D+MGLGKT+QILA L + + GP L++ P ++ W+ E+ + P R+ D R A+IS + + ++V+SY + S + ++WN + E ++ P AL + A ++ R+I +G+P++N+L ELWSLF I PG LGT F QQF P+ G R L+ + P++LRR KS V + LP ++E ++E+++ Y R LD G + KI A + LR+ C HP L + ++ + M +VE L+ H+ L+F+Q L L+ + ++ +Y LDG+T+V RQ+ +D F +F+++ K GG G+NL A+ V+ DP WNP+ + QA +RA R+GQ VTIYRLI +GTIEEKI K+ L + +L+ + D+ +L Sbjct: 252 LKVPYRIWSKLYKYQKVCVQWLWELHQQDVGGILGDEMGLGKTIQILAYLASLSYSIGLGPTLIICPATLMHQWVKESHAWWPAFRIAVLHDSGSYQGKSRKALISSIFEAKGILVTSYSGVVSFKEPINSLKWNYVXLXEGHKIRKPDALXTXAVKSIPTCHRLILSGSPLQNNLKELWSLFDFIYPGKLGTLPVFIQQFSVPITQGGYSNASRVAVATAYKCATVLRDTITPYLLRRMKSDVKSHINLPEKSEQILFCRLTDEQRSCY----RSYLDSSDIQNIFEG--KSKIFAGLINLRKICNHPDLYANKNEVSKYGHWRKSGKMIVVEALLKLWKKQEHRVLLFTQSRQLLSLLEIFIQRRQYSYLKLDGTTSVSSRQSLIDKFNEDPNIFVFILTTKVGGLGVNLVGANRVVIFDPDWNPSTDTQARERAWRIGQKNQVTIYRLITSGTIEEKIYHRQIFKQFLVNRVLKDPKQKRFFKSNDLYELF 739
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000009416 (supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 215.312 bits (547), Expect = 6.598e-57 Identity = 136/475 (28.63%), Postives = 237/475 (49.89%), Query Frame = 0 Query: 855 LGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAV---LLARAED-GPALVLAPTSVCTNWINEAARFAPTLRM--HRFGDGDRTAMISGLGPR--DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALN----ANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQA--LDDLAAPEEATGNQRFKILAEITRLRRACCHPRL-------------------VSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 +G L++YQ G +W++ L + LAD+MGLGKT+Q +A+ L+ R ++ GP L++ P S +NW E ++AP+ ++ ++ G R + S + +V+V++Y + + ++L ++W +I DE +KN K LN +N R++ TGTP++N L ELW+L + P + FEQ F +P ++ PF+LRR K V ++LP + E E S ++ Y+ + + + + ++ + + + + I +LR+ C HP + P V K + + I+ +L GH+ L+F Q + +I + +G + LDG+T ++R + F D IFL+S +AGG GLNL AD V+ D WNP + QA DRAHR+GQ V + RL+ ++EE+ L+ + K + + +++ Sbjct: 401 VGGILKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWTLEFEKWAPSAQVVAYKGSPGLRRNIQSQMKATKFNVLVTTYEYVIKDKSVLAKIRWKYMIIDEGHRMKNHHC---KLTQILNTYYTSNNRILLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPF----------ATTVLRPFLLRRLKKDVESQLPDKVEYIIKCEMSALQRVVYQQMAEKGVLITEDKRDKKTSSSDKKTLRNTIMQLRKLCNHPFIFQKIEECYAKHIGLPTDIVTGPDVYRSSGKFELIDRILPKLNKTGHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKAEERADMLKIFNQKDSDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERXLAAARYKLNMDEKVIQA 862
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000001291 (supercontig:LSalAtl2s:LSalAtl2s1214:48338:54824:1 gene:EMLSAG00000001291 transcript:EMLSAT00000001291 description:"augustus_masked-LSalAtl2s1214-processed-gene-0.5") HSP 1 Score: 205.297 bits (521), Expect = 1.338e-54 Identity = 136/459 (29.63%), Postives = 225/459 (49.02%), Query Frame = 0 Query: 880 ACLADDMGLGKTVQILAVLLARAED----GPALVLAPTSVCTNWINEAARFAPTLRM--HRFGDGDRTAMISGLGPR--DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALN----ANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPM----------EHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFK-ILAEITRLRRACCHPRL-------------------VSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 A LAD+MGLGKT+Q +A++ E GP L++ P S +NWI E ++AP++++ ++ G R S + +V+V++Y + + ++L ++W +I DE +KN K LN +N R++ TGTP++N L ELW+L + P + FEQ F +P E +RL ++ PF+LRR K V ++LP + E E S ++ Y + + + GN K ++ I +LR+ C HP + P + K + + I+ +L +GH+ L+F Q + +I + +G + LDG+T ++R + F + IFL+S +AGG GLNL AD VI D WNP + QA DRAHR+GQ V + RL+ ++EE+IL+ + K + + +++ Sbjct: 2 AFLADEMGLGKTIQTIALITYLMEKKKNMGPYLIIVPLSTLSNWILEFGKWAPSVQIVPYKGSPGSRRKAQSQMRATKFNVLVTTYEYVIRDKSVLAKIRWKYMIIDEGHRMKNHHC---KLTQILNTYYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAVTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSALQRVIYSQMAETGVLITEDRRDRKGNSGTKALMNTIMQLRKLCNHPFMFQKLEEAYAKHTGLPTNIVTGPDLYRSSGKFELIDRILPKLKKSGHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKSEERGEMLATFNEKNSEYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 457
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000004539 (supercontig:LSalAtl2s:LSalAtl2s237:482549:485751:-1 gene:EMLSAG00000004539 transcript:EMLSAT00000004539 description:"augustus_masked-LSalAtl2s237-processed-gene-4.3") HSP 1 Score: 199.904 bits (507), Expect = 1.632e-52 Identity = 127/432 (29.40%), Postives = 226/432 (52.31%), Query Frame = 0 Query: 901 RAEDGPALVLAPTSVCTNWINEAARFAPTLR-MHRFGDGD-RTAMISGL---GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVD----------IEGS-KLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLL-EGR--EVAASVDVEDMLDLLQ 1311 R++ GP +VL P + NW+NE ++ PTLR + GD + R I G DV+V+S+ ++ E ++ W ++ DEA +KN + S + R++ TGTP++N+L ELW+L + P + + F++ F + GD +RL ++ PF+LRR KS V L + E N + S+ ++ +Y + + D+ A ++ ++ + +LR+ HP L A +E S KL+ + ++ +L + + L+F+Q L ++ +G +Y +DG T+ + R +D++ + IF++S +AGG G+NL AD VI D WNP + QA DRAHR+GQ + V ++RL+M T++EKI+ K L ++ +GR + +++ +DML++++ Sbjct: 108 RSDPGPHMVLVPKTTLANWMNEFKKWCPTLRAVCLIGDQETRNKFIRDTMMPGGWDVLVTSFEMLLREKSVFKKFTWRYMVIDEAHRIKNEESKLSLIVREIKTTNRLLLTGTPLQNNLHELWALLNFLLPEVFSSSNDFDKWFNTDTCLGDDSLVKRLHGILKPFVLRRLKSDVEKSLLPKKETNIYMSLSKMQREWYTKI---LMKDIDIVNGAGKVEKMRLQNILMQLRKCVNHPYLFDGAEPGPPYTTDEHLVENSGKLQVIDKLLPKLKEQESRVLIFTQMTRILDILEDYCWFRGYSYCRIDGQTSHEDRVRQIDEYNMPNSEKFIFMLSTRAGGLGINLYTADIVILFDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVMENTVDEKIVERAAIKLRLDRMIIQQGRISDQKQNINKDDMLNIIR 536
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000010320 (supercontig:LSalAtl2s:LSalAtl2s683:133039:146718:1 gene:EMLSAG00000010320 transcript:EMLSAT00000010320 description:"maker-LSalAtl2s683-augustus-gene-1.38") HSP 1 Score: 198.749 bits (504), Expect = 1.755e-51 Identity = 143/460 (31.09%), Postives = 227/460 (49.35%), Query Frame = 0 Query: 858 QLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLL----ARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMI---------SGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGS-------KLKELMN----------IVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQ-AGKGDI-FLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQK 1284 +LRDYQ G +W++ + LAD+MGLGKT+Q + L GP LV+ P S W E AR+AP + + + GD ++I + + ++++Y ++ + L V + ++ DEA LKN ++ K L R++ TGTP++N L ELWSL I P +F +QF + Y K L L+ P+ILRR K V LP++ E V+ S ++K FY+ + + + AA + + + L++ C H L P +I+ + KL+ L+ ++ L + GH+ L+FSQ V L ++ L+ + ++Q LDG + R+ A++ F G D FL+S +AGG G+NL AD VI D WNP + QA RAHR+GQ V +YRL+ ++EE I+ ++K Sbjct: 475 KLRDYQLDGINWLVHAWCKQNSVILADEMGLGKTIQTVNFLYYLFHTHQLYGPFLVVVPLSTLDAWQREFARWAPDINVLSYVGDVASRSIIREYEWTHPGNKRSKFNAILTTYEIVLKDKQFLINVPYAVIMVDEAHRLKNDDSMLYKCLQDLTVYQRLLITGTPLQNSLKELWSLLHFIMPDKFDRWDEFNEQFGTSSAEKRGYTK--LHKLLEPYILRRVKKDVEKSLPAKVERILRVDMSRKQKQFYKWILTR---NYAALTKGIKGSTVSFVNIVMELKKCCNHILLTRPE-EIDNTFTMSREEKLQFLLRGSGKLLLLDKLLVRLRETGHRVLIFSQMVRVLDILAEYLELRRFSFQRLDGGIKGELRKQALEHFNNPGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKDQVNVYRLVTMNSVEEDIIERAKKK 928
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000000421 (supercontig:LSalAtl2s:LSalAtl2s1067:62002:65123:-1 gene:EMLSAG00000000421 transcript:EMLSAT00000000421 description:"maker-LSalAtl2s1067-augustus-gene-0.15") HSP 1 Score: 194.897 bits (494), Expect = 2.274e-51 Identity = 152/525 (28.95%), Postives = 248/525 (47.24%), Query Frame = 0 Query: 854 TLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG---PALVLAPTSVCTNWINEAARFAPTLRMHRFGDGD------RTAMISGLGPRDVVVSSYGLMHS---ESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQ------YAKQRL---KALVAPFILRRHKSQVLTELPSRTE-INRVVEASEEEKAFYEAL---RRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLI------RTALDKQGV--------------NYQYLD-----------------------------------------GSTTVKKRQAAVDDF-QAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSL 1291 T +L+DYQ G +W++ + LAD+MGLGKTV ++ L E G P L++ P+S NW E + P+L + ++ R ++ D+++++Y ++ S + +L + ++ ++ DEA LKN R + + A +++ TGTP++N+L EL SL + P L +K ++ S + Y ++R+ K ++ PF LRR K V+ LP + E + ++ S + + +++ + + +A L + +A+ N+ I + LR+ HP L+ D +KLK+L NI++ D HK V VD L ++ +T L + + ++YLD GST V +RQ +DDF Q IF++S KAGG G+NLT+A+ VI D +NP + QA DR HR+GQ RPV+I RLI GTIEE I S+ Q+K +L L Sbjct: 272 TTKLKLKDYQMIGLNWLVLMHKQSLNGVLADEMGLGKTVXAISFLAHLKETGNSKPHLIVVPSSTMDNWEKEIETWCPSLSIVKYYGSQEERQKIRYDLVRENLEYDILLTTYSMVVSSAEDKSLFKKISFHYVVFDEAHMLKNMSTSRYENLMRVKAPRKLLLTGTPLQNNLVELMSLLVFVMPELFANKKDLLKKVFSLFPKASEKQSRSNYEQERIAHAKHIMKPFFLRRLKVDVIKNLPPKNERVEKLPLTSRQHEHYFKLVSVYKEKA--KLLSEGKASSNEDSGI-GMLMNLRKTANHPLLIRSHYD--ENKLKKLANILKN--DPSHKNAVEKFIVDDLGIMSDYDIHKTCLLYKCIEDFRLSNEYICESGKFEYLDKLLPKMKENDDRILLFTQFTMVLDIIEDYLKIRGHNYIRLDGSTPVTERQYLIDDFNQDSSIFIFILSTKAGGLGINLTSANTVILHDLDFNPYNDKQAEDRCHRVGQTRPVSIIRLISEGTIEEGIYSVAQEKLKLEQDL 789
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000010789 (supercontig:LSalAtl2s:LSalAtl2s714:242685:269290:-1 gene:EMLSAG00000010789 transcript:EMLSAT00000010789 description:"maker-LSalAtl2s714-augustus-gene-2.35") HSP 1 Score: 190.66 bits (483), Expect = 8.878e-49 Identity = 143/482 (29.67%), Postives = 225/482 (46.68%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILA---VLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMIS---------------GLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRF-KILAEITRLRRACCHPRLVSPA-------------VDIEGSKLKELMNIVEELV----------DNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLE 1293 G QLR YQ G +W+M + LAD+MGLGKT+Q LA +L GP LV+AP S NW E ++ + G M+S G+ ++++Y + ++ L ++W + DEA LKN + + L+ R++ +GTP++N++ EL+SL + P +Q+ F ++F M++ Q K L+AL+ P +LRR K V L + E VE + +K +Y + + L+ + T N ++ + LR+ C HP L++ A D EG L ++V + GH+ L+FSQ V L ++ L ++ ++ +DG RQAA+D + D +FL+ KAGG G+NL AD I D WNP + QA R HR+GQ + V IYRLI T E ++ K L ++L+ Sbjct: 1418 GNQLRPYQLEGVNWLMFSWYNGRNCLLADEMGLGKTIQSLAFVDAILNYGIRGPFLVIAPLSTIPNWQREFELWSNMNVIVYHGSQTSRNMLSEYEMYYKDENGERIPGVYKFHCLITTYECVITDILELREIKWRACVIDEAHRLKNKNCKLLEGLSLLDLETRLLLSGTPLQNNINELFSLLSFLEPSQFNSQEAFIKEF-GDMQNEAQVTK--LQALLKPLMLRRMKEDVEKSLKPKEETIVEVELTNMQKKYYRGILEKNFSFLS---KGTSNANVPNLMNTMMELRKCCIHPYLLNGAEEQIQEEYRSMHDNDPEGVYFNSLTRSSGKMVLLDKLLPKLKEGGHRVLIFSQMVKMLDILEDYLIRKKYQFERIDGRIRGNLRQAAIDRYCRPDSDRFVFLLCTKAGGLGINLVXADTCIIYDSDWNPQNDLQAQARCHRIGQSKMVKIYRLITRNTYEREMFDKASLKLGLDKAVLQ 1893
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000000885 (supercontig:LSalAtl2s:LSalAtl2s1153:27270:31467:1 gene:EMLSAG00000000885 transcript:EMLSAT00000000885 description:"snap_masked-LSalAtl2s1153-processed-gene-0.34") HSP 1 Score: 182.956 bits (463), Expect = 6.516e-48 Identity = 148/525 (28.19%), Postives = 238/525 (45.33%), Query Frame = 0 Query: 855 LGAQLRDYQFAGFDWM------MRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGP--------ALVLAPTSVCTNWINEAARF----APTLRMHRFG----DGDRTAMISGLGPRDV---VVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-------DQYAK-----QRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLV----------------------------SPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGRE-VAASVDVEDMLDLLQ 1311 L LR +Q G +M +R+ G +A +MGLGKT+Q + ++ + P A+V+ P+S+ NW NE +++ L M D D + I+ G R V ++ SY S++L + ++ DE LKN L ++ + + RV+ +GTPI+N L E +SL +N GLLGT ++F ++F +P+ G D + K Q + +V I+RR ++ + LP + E V+ ++ +K Y++ R D + + + F L IT L++ HP L+ PA + S L L+ V+ + K ++ S + L L + + LDGS ++KKR VD F IF++S KAGG GLNL A+ ++ DP WNPA ++QA R R GQ + IYR + GTIEEKI K+ L+ +++ E V V D+ +L + Sbjct: 138 LTKVLRPHQREGVKFMYDCVTGIRIPE-NYGCIMAXEMGLGKTLQCITLMWTLLKQSPECKPTIEKAIVVCPSSLVKNWYNEISKWLGGRVQPLAMDGGSKDSIDKDLSGFINTYGRRPVNPILIISYETFRLHSSVLQSGEVGLVLCDEGHRLKNSENLTYQSLMGIKSKRRVLLSGTPIQNDLLEYFSLIHFVNEGLLGTAQEFRKKFENPILRGRDADATDDDHKKGVQKLQEMAEVVNRCIIRRTQALLSKYLPVKYEQVICVQLTDLQKDIYQSFCRS--DTIRKNLKGSEKVGFSPLRAITSLKKLVNHPDLIYNVCKEGHEGFEKSLXYYPANYXPNGRLXPAYSGKLSVLDCLLAFVKNCSTD--KVVLVSNYTQMLDLFERLCSLRNYGFVRLDGSMSIKKRAKVVDKFNDPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRFLAVGTIEEKIFQRQAHKKALSSCVVDQEENVEKHFSVTDLKELFK 657
BLAST of helicase snf2 vs. SwissProt
Match: gi|81345827|sp|P94593.2|YWQA_BACSU (RecName: Full=Uncharacterized ATP-dependent helicase YwqA) HSP 1 Score: 309.301 bits (791), Expect = 1.165e-87 Identity = 198/561 (35.29%), Postives = 308/561 (54.90%), Query Frame = 0 Query: 770 QLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEAREL-ELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG----PALVLAPTSVCTNWINEAARFAPTLR--MH---RFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHK--SQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFK-ILAEITRLRRACCHPRLVSPAVDIE-----GSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQ-GVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 Q ++Q R ++ E+E +S L ++L D +D + + A A + D+ S + KL A L E ++ + LR YQ G +W++ L GACLADDMGLGKT+Q++A L E G P L++APTSV NW E FAP L +H R GD A + DVV++SYGL H+++ L+ V WNT+ DEAQ +KN +S+A L + +GTP+EN L ELWS+F +N G LG+ F ++++ P+E D+ +L+ L+ PF+LRR K +V LP + E + S E+ + YE L + D + + TG QR IL+ + RL++ C HP L E KL++L+ ++ + L+F+Q++ +++ L+K G Q+L+GS + ++R V+ FQ + ++SLKAGG+GLNLTAA++VIH D WWNPAVE+QA+DRA+R+GQ R V ++++I GTIEEKI + + K+ L D +++ + +++ +L Sbjct: 367 QFIKQMK-RLMEKAESEGLHMSDILARELMDQQDGGLEDSDL--IDTSAFAGIQFDL----SKQLRSLIRKLTAAENLPEHKVSPSFKGTLRPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIAYFLHVKESGRQKTPHLIIAPTSVLGNWQRELQTFAPDLSVALHYGPRRPKGDDFA--AHYENADVVLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHHIALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRIGQLQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVKDTFDHMTS---LTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEKLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQRKEYPTLILSLKAGGTGLNLTAANHVIHYDRWWNPAVENQATDRAYRIGQERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQSENWITELSTQELEELF 915
BLAST of helicase snf2 vs. SwissProt
Match: gi|94730430|sp|P47264.3|Y018_MYCGE (RecName: Full=Uncharacterized ATP-dependent helicase MG018) HSP 1 Score: 301.597 bits (771), Expect = 2.927e-84 Identity = 173/484 (35.74%), Postives = 271/484 (55.99%), Query Frame = 0 Query: 838 QEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG----PALVLAPTSVCTNWINEAARFAPTLRMHRFGDGD---RTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIE-GSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD-IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELA-DSLLEGREVAASVDVEDMLDLLQ 1311 Q K+ + L L + LR YQ G W+ L + G LAD+MGLGKT Q++ +L + P+L++ P S+ NW +E +FAP +++ +G+ R+ + L + +++ S+ ++ S+ ++ +++ ++ DEAQ +KN + +KAA + NF + TGTPIEN L +LWS F + P LG +K+F QF E D+ + Q+L +PFILRR K++VL ELP + + VE SEE + Y+ +Q D L +E+ IL+ I +LR C + + D E SK +NI+ E ++N K ++F+QF+D + + L Q +++ DG TVK R + F + K + L SLKAGG G+NLTAA+ VIH D WWN AVE+QA+DRAHR+GQ + V +YR+I TIEE++ + QK+EL +L+E S+ E++L L + Sbjct: 557 QLKIASENQFHLSLDNNQINNLRKYQKEGVKWIRALEDNQFGGILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLIIVPASLLLNWKSEFQKFAPHVKIVT-ANGNFKERSQVYESLKNQ-ILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQF--EKEKNDE-SFQKLMKKTSPFILRRTKNKVLKELPKKIITDIYVELSEEHQKLYD---KQKTDGLKEIKESDAKNALNILSLILKLRHICSLVK-DNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTLVEDVNFFKSLSHEELLKLFE 1031
BLAST of helicase snf2 vs. SwissProt
Match: gi|2493354|sp|P75093.1|Y020_MYCPN (RecName: Full=Uncharacterized ATP-dependent helicase MPN_020) HSP 1 Score: 296.975 bits (759), Expect = 1.162e-82 Identity = 169/478 (35.36%), Postives = 268/478 (56.07%), Query Frame = 0 Query: 842 QEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLL----ARAEDGPALVLAPTSVCTNWINEAARFAPTLRMH--RFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD-IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKREL-ADSLLEGREVAASVDVEDMLDLLQ 1311 Q +L L LR+YQ G W+ L + G LAD+MGLGKTVQ++ LL + P+L++ P S+ NW +E +FAP +++ +R + L ++++ S+ ++ S+ L+T +++ ++ DEAQ +KN + +KAA + NF + TGTPIEN L +LWS F + P LG +K+F QF E DQ + L +PFILRR KS+VL ELP++ + VE + + YE R + L+++ ++ + F IL I +LR C P+ S + +K + + I+ E ++N K ++F+QF+D + + +QG+ Y DG + K R + ++ F K + L SLKAGG G+NLTAA+ VIH D WWN AVE+QA+DRAHR+GQ + V +YR+I TIEE++ + +K+EL + +L+E S+ E++L L + Sbjct: 561 QNNNVFDLSLEHKKITSLRNYQQEGVKWIRGLEENKFGGILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASLLLNWKSEFEKFAPQIKVKVANIPSKERGELYEKL-TNEILIVSFNVLRSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLPSFLGNKKQFTDQF--EKEKTDQ-SFHLLMQRTSPFILRRTKSKVLKELPNKITTDIYVELNPMHQKLYEEERDRGLEEIKQIQDKSS---FNILTLILKLRHLCSLPK-NSQGILENSAKKEAALEIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDVNFFESLTNEELLRLFE 1030
BLAST of helicase snf2 vs. SwissProt
Match: gi|57012942|sp|Q7G8Y3.2|ISW2_ORYSJ (RecName: Full=Probable chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog) HSP 1 Score: 265.388 bits (677), Expect = 9.861e-72 Identity = 167/493 (33.87%), Postives = 258/493 (52.33%), Query Frame = 0 Query: 849 LQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA----RAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF--GDGDRTAMISGL---GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHK-----------------ALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVA--ASVDVEDMLDLLQ 1311 L PS + ++RDYQ AG +W++RL LAD+MGLGKT+Q +++L R GP +V+AP S NWI E RF P LR +F +R + L G DV V+S+ + E T L W +I DEA +KN +L SK N N+R++ TGTP++N+L ELWSL + P + + + F++ F E+ Q Q+L ++ PF+LRR KS V LP + E V S+ +K +Y AL ++ L+ + A G +R ++L +LR+ C HP L +G++ E LV+N K L+FSQ L ++ L +G Y +DG+T + R A+++ F + +FL+S +AGG G+NL AD V+ D WNP + QA DRAHR+GQ + V ++R TIEEK++ +K L +++ +A +V+ +D+L +++ Sbjct: 221 LSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINA-----GGERKRLLNIAMQLRKCCNHPYL------FQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVR 702
BLAST of helicase snf2 vs. SwissProt
Match: gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE (RecName: Full=Probable global transcription activator SNF2L1; AltName: Full=ATP-dependent helicase SMARCA1; AltName: Full=DNA-dependent ATPase SNF2L; AltName: Full=Nucleosome-remodeling factor subunit SNF2L; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1) HSP 1 Score: 263.848 bits (673), Expect = 1.751e-71 Identity = 165/483 (34.16%), Postives = 260/483 (53.83%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVL----LARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGD-RTAMISG---LGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPA-----------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLL--EGREV---AASVDVEDMLDLLQ 1311 G LRDYQ G +W++ L LAD+MGLGKT+Q +A+L R GP +VL P S NW+NE R+ P+LR+ F GD D R A I G DV V+SY ++ E ++ W L+ DEA +KN ++ S+ + R++ TGTP++N+L ELW+L + P + + F+ F + GDQ +RL A++ PF+LRR K+ V LP + EI + S+ ++ +Y + + +D L + + + ++L + +LR+ C HP L A + K+ L ++ + + G + L+FSQ L ++ +G Y LDG T ++R+ A+D F A IF++S +AGG G+NL +AD VI D WNP V+ QA DRAHR+GQ +PV ++RLI T+EE+I+ + K L DS++ +GR + + + E+ML +++ Sbjct: 184 GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNS---SGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRL-DSIVIQQGRLIDQQSNKLAKEEMLQMIR 662
BLAST of helicase snf2 vs. SwissProt
Match: gi|417308|sp|P32333.1|MOT1_YEAST (RecName: Full=TATA-binding protein-associated factor MOT1; Short=TBP-associated factor MOT1; AltName: Full=Modifier of transcription 1) HSP 1 Score: 265.388 bits (677), Expect = 9.324e-71 Identity = 182/583 (31.22%), Postives = 286/583 (49.06%), Query Frame = 0 Query: 810 RFHPLASGAIAE---LTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA----RAEDG-----------PALVLAPTSVCTNWINEAARFAPTLRMHRFGDGD--RTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPM------------EHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALD----DLAAPEEATGNQRFKILAEITRLRRACCHPRLV-SPA----------VDIEGSKLKELMN---------------IVEELVDNG---------------HKALVFSQFVDHLKLIRTALDKQ---GVNYQYLDGSTTVKKRQAAVDDFQAGKG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVA-ASVDVEDMLDLL 1310 + PL +G IA+ L ++++ E + Q+ + ++ +LP + A LR YQ G +W+ L + L DDMGLGKT+Q + ++ + R ED P+L++ P S+ +W NE ++AP L++ + G R + L D++V+SY + ++ +L ++N + DE +KN ++ +KA + AN R+I TGTPI+N++ ELWSLF + PG LGT+K F+++F P+ + A + L V PF+LRR K VL++LP + + E + +K Y ++ + D+ E A G Q I + +R+ C HP LV SP + G L +++N I EE +D H+AL+F Q D L ++ L K+ V Y LDGS + RQ V F D L++ K GG GLNLT AD VI ++ WNP + QA DRAHR+GQ + V +YR+I GT+EEKI+ L + K +A +++ + AS+D +LDL Sbjct: 1221 KLVPLEAG-IADPKGLPEELVASRERERDFIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQH--IFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLF 1800
BLAST of helicase snf2 vs. SwissProt
Match: gi|81916841|sp|Q9CXF7.1|CHD1L_MOUSE (RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like) HSP 1 Score: 258.07 bits (658), Expect = 2.364e-70 Identity = 172/475 (36.21%), Postives = 263/475 (55.37%), Query Frame = 0 Query: 844 ARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLL---ARAED-GPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMI-------SGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQK--KFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRL---VSPAVD------IEGS-KLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 +E +LQ G +LR YQ G +W+++ H + G L D+MGLGKT Q +A+L+ R D GP LVL P SV +NW E RFAP L + GD + A + SG V++++Y + +++ L W+ L DEA LKN +L + + +A FR++ TGTPI+N L EL+SL ++ P L ++ F Q++ +E + A + L L+ PF+LRR K+QV TELP +TE+ S +K +Y+A+ + DL A E T ++ K+ +T+LR+ HP L V P IE S KL L ++ L GH+ L+FSQ L +++ +D +G +Y+ +DGS ++R A+ +F +FL+S +AGG G+NLTAAD VI +D +NP + QA+ RAHR+GQ + V + RLI T+EE + K +L + ++EG Sbjct: 25 VQEPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGF---HVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRY-QDIEKESKSASE-LHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAI---LMKDLDAFENETA-KKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490
BLAST of helicase snf2 vs. SwissProt
Match: gi|961454283|sp|Q8RWY3.4|ISW2_ARATH (RecName: Full=ISWI chromatin-remodeling complex ATPase CHR11; AltName: Full=ISW2-like; AltName: Full=Protein CHROMATIN REMODELING 11; AltName: Full=Sucrose nonfermenting protein 2 homolog) HSP 1 Score: 260.381 bits (664), Expect = 2.782e-70 Identity = 156/452 (34.51%), Postives = 244/452 (53.98%), Query Frame = 0 Query: 849 LQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA----RAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMISG----LGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPA-----------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKIL 1278 L PS + ++RDYQ AG +W++RL LAD+MGLGKT+Q +++L R +GP +V+AP S NW+NE RF P LR +F G+ + I G D+ V+S+ + E T L W +I DEA +KN +L SK + N+R++ TGTP++N+L ELW+L + P + + + F++ F E+ Q Q+L ++ PF+LRR KS V LP + E V S+ +K +Y+AL ++ L+ + A G +R ++L +LR+ C HP L A + K+ L ++ +L + + L+FSQ L ++ L +G Y +DG+T +R A+++ + + +FL+S +AGG G+NL AD VI D WNP V+ QA DRAHR+GQ + V ++R IEEK++ Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNA-----GGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVI 625
BLAST of helicase snf2 vs. SwissProt
Match: gi|122139236|sp|Q3B7N1.1|CHD1L_BOVIN (RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like) HSP 1 Score: 254.603 bits (649), Expect = 3.404e-69 Identity = 163/460 (35.43%), Postives = 254/460 (55.22%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARA----EDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMISGLGPRD----VVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQK--KFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRL---VSPAVD------IEGS-KLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 G LR YQ G +W+ + H + G L D+MGLGKT Q +A+ + A ++GP L+L P SV +NW E RFAP L + GD D+ A + ++ V++++Y + +++ L W+ L+ DEA LKN +L K + + F ++ TGTPI+N L EL+SL + P L ++ F Q++ +E + A + L L+ PF+LRR K++V TELP +TE+ S +K +Y+A+ + DL A E T ++ K+ +++LR+ HP L V P IE S KL L ++ L GH+ L+FSQ L +++ LD +G +Y+ +DGS ++R A+ +F FL+S +AGG G+NLTAAD VI D +NP + QA+ RAHR+GQ + V + RLI T+EE + K +L ++++EG Sbjct: 45 GIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRY-QDIEKESESASE-LYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAI---LMKDLDAFENETA-KKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEG 498
BLAST of helicase snf2 vs. SwissProt
Match: gi|961512522|sp|F4JY24.1|CHR17_ARATH (RecName: Full=ISWI chromatin-remodeling complex ATPase CHR17; AltName: Full=Protein CHROMATIN REMODELING 17) HSP 1 Score: 256.529 bits (654), Expect = 6.583e-69 Identity = 155/452 (34.29%), Postives = 242/452 (53.54%), Query Frame = 0 Query: 849 LQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA----RAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMISG----LGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPA-----------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKIL 1278 L P+ + +LRDYQ AG +W++RL LAD+MGLGKT+Q +++L R +GP +V+AP S NW+NE RF P LR +F G+ + I G D+ V+S+ + E T L W +I DEA +KN +L SK + N+R++ TGTP++N+L ELW+L + P + + + F++ F E+ Q Q+L ++ PF+LRR KS V LP + E V S+ +K +Y+AL ++ L+ + G +R ++L +LR+ C HP L A + K+ L ++ +L D + L+FSQ L ++ L +G Y +DG+T +R A+++ + + +FL+S +AGG G+NL AD VI D WNP V+ QA DRAHR+GQ + V ++R IE K++ Sbjct: 184 LTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNG-----GGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVI 630
BLAST of helicase snf2 vs. nr
Match: gi|737288459|ref|WP_035271611.1| (ATP-dependent helicase [Desulfonatronum thiodismutans]) HSP 1 Score: 904.434 bits (2336), Expect = 0.000e+0 Identity = 547/1355 (40.37%), Postives = 780/1355 (57.56%), Query Frame = 0 Query: 1 MITALGWLLDGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQAS---PDTFRGIYSIYQK-RYNRFGHPILTDEL-MRNAYYLGETNALFHY--ACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPY--LSSMAYCAEHASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASAAGFIAFATDKPLPAIG-YFTQAIKLRKREFGTRLESLDDPYM--LFYQLSLLQLGDKNSLARIAKLQKA---DDPYSDSPERLMVVDAAERLLFLHSGRP---KRNIEGRENIGAISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPWHVAQLDAALNKNSASN-----------DSYLAIANIVEPVPEWQMSLNALTGM-MAPPEPTSHTQHVHSETRMAWFI---GEEFELEPREQK-RGKGGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGY--DKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDW--LLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAP-EEATGNQRFKILAEITRLRRACCHPRLVSPAVDIE----GSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQ 1311 ++ L W D + TLA ++ K WR +M L V QL+++ + + V + R + + + Y + + + + +RNA ++ + + A Q P++ ++ + + L + +W LP I++Q +G + ++D R L+ + A P R + A + G + Q L S A G F A+ K+ GTR ++ P M +F L+LL+ G L R+ + Q + + + D + + A + L +P K+++ G + L W +P L L + EH G W+ + L + S+ + + +P EW+++L AL + A V E R+ W + G++F LEPREQK + G W+ GR VAL +LR ES+ +L+ D R+C I+ YGY E ++ QA+LAAVGHP +F D+ VE+ + P L VL + + L + + P + + + ++ + R G +++ V QH +IA ILG G++ P +A+EQVL+SI+ +APLLTV S I G AE V D+R L+++P G+GL + LF RP + L PG GG + +E++G++V + RD E++ AL+E P L +W LEDPESALE L L+ + +VL WP+G+ + + +S +++WFA++G L LDD V+ + ++L L+ S GRF+++ E +F L+ L K+L +L + D G+ HPLA+ + E+ M S W +++EA EL ++PSTL A+LR+YQ GF W++RLAHW AGACLADDMGLGKTVQ LA++L RA+ GP LVLAPTSVC NW+ E ARFAP+LR RFG G+R M+ GP D++V SYGL+ +ES LL ++W TL+ADEAQA+KN A RS+AA L A+F+VI TGTPIEN+LGELW+LF INPGLLG+ ++F + F P+E D AK+RLK+L+ PFILRR KS+VL ELPSRTE+ VE S EE A Y+ALRR+AL+ +A P ++ G QR KILAEI RLRRACCHP LV P + +KL+ I+E+L++N H+ALVFSQFVDHL L+R LD++ V YQYLDGST +KKRQ AV FQAG+GD+FLISLKAGG GLNLTAADYVIH+DPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ GTIEEKIL LH+ KR+LA SLLEG + + VE+MLDL++ Sbjct: 46 ILQKLDWK-DARGRTLAGMVGKEWREKMARLKLLSVKQGRLQLKMELRLEPLRVLDMEGRYSEVLRAVERVVRTPSYTVYDMDVSREWIGLRNALFVRDEKEVLKLIGAAQDPWSLAQSNRIDDLVGMCLVPLNMEWLERLPDVIKFQAVGTYLSNGQAFLIDTRDVWELARRWFPAMAGKHAGP--RHVLAAQYLARGETDQARELLRDDQSAAGLALFGWLLFLLGEYDEAGKVFDDALVAVKK--GTRKRNVRIPGMPGVFQNLALLRRGRPEDL-RLVRHQASLIEKETHKDVYRFVFFLLAKFASVLLGEQKPEQFKQSLFSSSPAGTHTLLFGCLAQLWTGEKPKPAVLGQLAELGVHAEHVGYRWYAEETRRILEATKSGKLLSVFPGSEGVVSWKTLTFLFKPKEEWELALEALKNLGSASTSGGGARGAVVGEQRLTWRLYQAGKQFGLEPREQKLKANGTWTAGRPVALKKLRHSPESYSYLTEHDRRLCLAISEDTYSTYYGYYNKTEYSLVGDQALLAAVGHPLIFLEDDPERPVEMVQAEPSLQVLDEQDGLRVRVEPPLPE-NGTVAIHREGRHRLRVVRFDGQHAKIATILGEKGVKAPAAAKEQVLESIAEVAPLLTVHSTISG--LGQAESVPADSRPVLRLRPVGDGLLIDLFFRPVPDGPLLVRPGEGGKTLFTEVEGRQVCATRDDKTEREAVQALLEHCPPLGLDTDANWSWRLEDPESALETLLSLQEMGDAVVLEWPEGKQVRIAAESGLNRFKIGLSRKQDWFAMNGGLDLDDGTVMEMSRLLSLLENSPGRFVRLEEGDFLCLTRDLRKRLDALRAYGDG-GKVHPLAAPVLDEVLDGMRVTSPKAWKDLLRRVREAAELRPEVPSTLRAELREYQVEGFQWLVRLAHWGAGACLADDMGLGKTVQALALILTRAKQGPTLVLAPTSVCINWMEEVARFAPSLRPVRFGPGERERMVEQAGPFDLIVCSYGLLQTESELLAKIRWTTLVADEAQAIKNVVAKRSRAAMTLPADFKVITTGTPIENNLGELWNLFNFINPGLLGSLERFNRNFAVPIEQNRDAEAKRRLKSLIRPFILRRLKSEVLAELPSRTEVVLSVELSPEEAAVYDALRRRALEKMAEPDDDQPGQQRIKILAEIMRLRRACCHPELVMPGAGPKSGPGSAKLQAFGEILEDLLENKHQALVFSQFVDHLHLVRDYLDQRKVRYQYLDGSTPIKKRQQAVTAFQAGEGDLFLISLKAGGFGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVTKGTIEEKILDLHRHKRDLATSLLEGTDSGIKLSVEEMLDLIR 1390
BLAST of helicase snf2 vs. nr
Match: gi|1224091685|ref|WP_092120913.1| (ATP-dependent helicase [Desulfonatronum thiosulfatophilum] >gi|1086396834|emb|SDB42196.1| Superfamily II DNA or RNA helicase, SNF2 family [Desulfonatronum thiosulfatophilum]) HSP 1 Score: 902.508 bits (2331), Expect = 0.000e+0 Identity = 553/1349 (40.99%), Postives = 782/1349 (57.97%), Query Frame = 0 Query: 10 DGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVR-----QASPDTFRGIYSIYQKRYNRFGHPILTDE---LMRNAYYLGETNALFH--YACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAYC-------AEHASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYM--LFYQLSLLQLGDKNSLARIAK----LQKAD--DPYSDSPERLMVVDAAERLLFLHSGRPK--RNIEGRENIGAIS--CLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPWHVAQLDAAL-------NKNSAS----------------NDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAW---FIGEEFELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCI--NIVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAA 1299 D + T L + K W+ RME L V + Q + +I E R + + R + + + +P+ + MR YLG+ + + + + + E+ + L + W LP +++Q+LG T G+ DL P + A++ S + Y + L A E L V +S S G+ F + A+ F I + KRE TR ++ P M +F+ L LL+ G+ L I K + K + DPY++ + A L+ L +P +++ G N+ L W +P K+L+ L G W+ + + L NK S N+ + +I +++P W+++L+AL + A P++ ETRM W +GE LEPREQKR K G W+ G+ V+ RL E F L+ D RI + + RYG I + QA+LAAVGHP +FW D+ VE+ ++ P L VL + E+L L + P +LV +++ + E+HL+IA ILG GL VP++A+E+VL SI+ IAPLL V S+IGG + AE V D+R ++++P GL M LF+RP L PG GG + +E+DG++ + RD EQ ++E PV WL+ED E ALE L L+ E +VL WP+G+ + ++ ++ M ++ +++WF+L+GEL+L+D VL + ++L L+ QS GRF+++ E +F +L+ L K+L ++ ++D GRF+PLA+ A+ ++ Q M +++ W +L+E+R+L ++P+TL A+LRDYQ GF W+ RLAHW AGACLADDMGLGKT+Q LA++L RA+ GP LVLAPTSVC NW++E+ARFAP+LR RFG G R M++ GP D++V SYGL+ ++S L V+W+TL+ADEAQA+KN RS+AA AL A FR+I TGTPIENHLGELW+LF INPGLL + ++F ++F P+E D A++RLK L+ PFILRR KS+VL ELPSRTE+ VE S EE A YEA+RR AL+ ++ P + G QR ++LAEI RLRRACCHP LV P SKL+ I++EL++N H+ALVFSQF HLKL+R LDK+ V+YQYLDGST +K+RQAAV+ FQAG+GD+FLISLKAGG GLNLTAADYVIHMDPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ GTIEEKIL LH+ KR+LA SLLEG + A Sbjct: 54 DSRGTPLHQAVTKAWQERMERLHLLSV--KNARFQCNEMIREEPARTLALEKKYAEVHRVVLKLLPLPEFSWNNPMDFSKGYHRMRTDLYLGKYSDVMRGISGVSSTWDLLPSHEVAQLARLCLYPLNRSWVEQLPDVLKFQVLG---TSLMKGMEDLIPRNTHFELAEKWFPKMAQNHSGPKYVMAQQYLIRGNLQSAR---ELLGVDQNSTDLSLLGWWHFVRGEYDQAMEAFDACIIIMKRE--TRKRNVRIPGMAGIFHNLCLLRRGEPEDLRLIPKQAGFMAKGEIPDPYAE----VFAAFADAALILLGEKKPSSCKDLAGTYNLQHFPYPALFRPLIRSWLGQDPIDKQLKALSDNYHIALSGGYLWYAEEAEMLLRKMGKIRNKKSVKESAKESNRERTDVPQKNEHWASITELLKPKASWELALDALKNIGATVSPSARGSG--GETRMTWRLRCLGEVCVLEPREQKRKKNGQWTTGKNVSPYRLHDSPEDFSSLTDHDRRISQASFGRMSGSYSRYGGGYSIQDLD-QALLAAVGHPLIFWEDDPERPVELVKSEPALQVLEEKEKLRLRIDP-TPVAGRNLVRREETRHRLRLVHFDERHLKIADILGLKGLTVPVTAKERVLASIAEIAPLLAVHSNIGGSPVQ-AEEVAADSRPVIRLRPINGGLGMELFLRPIAGGNLLIRPGEGGKTLFAEVDGRQYCAVRDIQAEQLAVKKVLESCPVLDPDANWSWLIEDSEEALETLLQLQELGESVVLEWPEGQRIKVVPEADSSKMRISVRQRKDWFSLEGELQLEDGRVLEMAQLLALLEQSPGRFIRLEEGDFLSLTRDLRKRLDAVRGYSDA-GRFNPLAAPAMEDVLQGMRVDATKPWKDLLRRLRESRDLTPEVPTTLRAELRDYQVEGFQWLARLAHWGAGACLADDMGLGKTIQALALILTRAKLGPTLVLAPTSVCINWMDESARFAPSLRPLRFGPGAREQMLTEAGPFDLIVCSYGLLQTQSEQLAKVEWSTLVADEAQAIKNVFTKRSRAAMALPAGFRMITTGTPIENHLGELWNLFNFINPGLLNSMERFNRKFAVPIEQNKDNEARRRLKNLIRPFILRRLKSEVLAELPSRTEVVLPVELSPEESAIYEAIRRNALEKMSEPMDQPGQQRIRMLAEIMRLRRACCHPELVMPGNGATSSKLQAFGEILDELLENRHQALVFSQFTGHLKLVRDYLDKRKVHYQYLDGSTPIKQRQAAVNAFQAGEGDLFLISLKAGGFGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVTKGTIEEKILDLHRHKRDLATSLLEGTDSGA 1382
BLAST of helicase snf2 vs. nr
Match: gi|495592316|ref|WP_008316895.1| (ATP-dependent helicase [Leptolyngbya sp. PCC 6406]) HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0 Identity = 505/1246 (40.53%), Postives = 747/1246 (59.95%), Query Frame = 0 Query: 126 WDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAYCAEHASEERPAF-----RAMYAVSLVLTG---------ASVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIAKLQKADD-----PYSDSPERLMVVDAAERLLFLHSGRPKRNIE---------GRENIGAISCLITASHSRW-FDVEPTAKELEVLQGIRDDVEHYGLPWHVAQLDAALNKNSASNDSY-----------LAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFI----GEEFELEPREQKRG-KGGWSKGRKVALMRLRTERESFDFLSPADERICDCI--NIVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQ-DEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDG-LRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGT--DWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFN--ISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDG---RFHPLASGAIAELTQDMLG-ESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSE--STLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPME-HGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQ 1311 +D WF LP +I ++ ++ + + ++ ++P + ++ P F +YA L+ G A V + +L+ S++ + G +A A+ + K+ K+ ++ L P + Y ++LL+ LA A L + + P+S S + + +R L S ++ G + +++ LI W + A LQ + + GL W A+ +A L++ + + ++ + + + W++SL AL + ++T +E R+ W + + + +EP+EQK KG WSKGR +AL RL +S +L+P D ++C I + R GY + A+ A VGHP VFW D+ +E+ PEL+V Q ++L L L+P ++ +E +V++ ++ V LS++H IA ILGPD L VP++A+E+VL +ISA++ ++TV SDIGG +AE V + HL + PAG GL++ VRPFG+ GP + PG GG V++EI+G R +++RD + E++ A+V +P Q P + +W+++D E LE L L+ ++++++WP+G +L L HSA + F+ I QR+WFA G L+L +D ++ +Q++++L+ ++ RF+ +G+ +F L+ + K+L L F++ G RFHPL + A+ +L D+ ++ W ++++ L+ ++PSTL A+LRDYQ GF+W+ RLAHW GACLADDMGLGKT+Q LA++L RA GP LV+APTSV TNW++EA +FAPTL G DR A + L P D++V SYGL+ E + LL V W T++ DEAQA+KN RS+ A L F+++ TGTPIENHLGELW+LF+ INPGLLG+ +F +QF +P+E H D+ A+Q+LK L+ PFILRR+KSQVL ELPSRTE+ VE S EEKA YEALRR+AL L G + ++LAEI RLRRACC+PRLV V + +KL+ L ++ +L+DN HKAL+FSQFVDHL LIR LD+Q + YQYLDGST VK R+ VD FQAG+GD+FLISLKAGG+GLNLTAADYVIHMDPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ GTIEE+I+SLHQQKR+LADSLLEG +V+ + +D++ L+Q Sbjct: 185 FDSAWFQALPTSI---IVESIRLVIRLNLMAIQPIDDIIQEANTLWEKDSPVFCNQGAGVLYAEGLIWQGNWNKASQILAKV-VPALSKEESAFGLAVQGMLALLQGNLSQALEQYAAGYKIAKKTTASKQAWLSSPAAILYLVALLKANTSQDLALAATLMETVNKLPLNPFSTS--YIYLSHMVQRQQGLISPTASLDVNPILIPSSRGGSPYLPSMNRLIAGLCQYWTLPKKKRASLTTKLQELVAESRAAGLHWMAAEAEALLHRCNRAPQNFDSQGWWQEHGGTPLVDAIAEYEPWELSLQALANLKDIAR--TNTSSAIAEYRLVWLVTYRNSQSWSIEPKEQKLSVKGNWSKGRSIALKRLAERDDSLSYLTPQDHQVCSHIYNETEYSYGRRGYRSYYYELSASAITALVGHPLVFWNDDTLTRIEIVSGEPELLVQEQPGDRLRLQLSPPLSTDNEVMVIQETP-TRLKVIELSDRHHHIASILGPDNCLEVPMNAKERVLTAISAVSGIVTVHSDIGGEA-ADAETVPAHAQTHLHLFPAGAGLKVATLVRPFGDSGPYYPPGSGGATVLAEINGTRQQTQRDLTAEKEYMAAVVNALPSLQRYPESHGEWVIDDLEDCLELLASLQALGDQVIIAWPEGETLRL--RHSADTKQFSLRIERQRDWFAASGSLQLSEDQIMDMQQLMRLLSETPSRFIPLGDGQFLELTETFRKRLDELRAFSEHHGDGVRFHPLVAPALEDLMDDVGDLKADKAWKAHLKRMKSMATLQPEVPSTLQAELRDYQIEGFNWLARLAHWGVGACLADDMGLGKTLQALALILTRAPQGPTLVVAPTSVATNWLSEATKFAPTLNCLTLGSSDRAAQVDQLQPFDLLVCSYGLLQQEDVADLLAEVDWQTIVLDEAQAIKNSATKRSQGAMKLQGGFKLLTTGTPIENHLGELWNLFRFINPGLLGSADRFNEQFATPIERHQDKVARQKLKKLIQPFILRRNKSQVLAELPSRTEVTLQVELSSEEKALYEALRREALTKLTESNLEAGAKHLQVLAEIMRLRRACCNPRLVMADVAMPSAKLEVLGEVLTDLLDNRHKALIFSQFVDHLSLIREYLDRQNITYQYLDGSTPVKHRKERVDAFQAGQGDVFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAQGTIEEQIVSLHQQKRDLADSLLEGTDVSGKISTDDLMKLIQ 1418
BLAST of helicase snf2 vs. nr
Match: gi|1302475738|ref|WP_100903349.1| (ATP-dependent helicase [Nostoc flagelliforme] >gi|1297084627|gb|AUB43066.1| Superfamily II DNA or RNA helicase, SNF2 family (plasmid) [Nostoc flagelliforme CCNUN1]) HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0 Identity = 517/1234 (41.90%), Postives = 751/1234 (60.86%), Query Frame = 0 Query: 126 WDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAY-CAEHASEERPAFRAMYAVSLVLTGASVQL-ESLNVASSSWLASAA---GFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIAKL-----QKADDPYSDSPERLMVV------DAAERLLFLHSGRPKRNIEGRENIGAISCLITASHSRWFDVEPTAKEL-EVLQGIRDDVEHYGLPW---HVAQLDAALNKNSASN--------DSYL-AIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIG---EEFELEPREQKRG-KGGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVL-AQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDG-LRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTD--WLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQRE--WFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDG---RFHPLASGAIAELTQDMLGESSSE--WNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSE--STLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPME-HGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 +D WF TLP + + + + + + + L+ + C + L+L G + + ESL S+ + +AA G+++F + AI Y+T A+K K+ G R + LF+ L+LL+ G L + ++ D + RL +V D ++ F+ SG +I E ++ L + W D E K L +L+ + G W A+L + L +S N DS + I +++ P W+M LNAL + + P+ + ++ SE R+AWFI L+PREQK KG WSKGR +AL RL + FD+++P D R+C CI + + Y K F +A+ A +GHP VFW D VE+ + PEL+V + ++L L +P++ + S++++ + ++ V ++ +H IA I+G D L VP A +QVL +I+A++ ++TV SDIGGG+ E AE V T H+ + PA GL++ L RPF + GP + PG GG VI+EIDGKR+++ R+ +E+ A ++ P + D W++ DPE LE L L+ +V+ WPQG L + H+A FN+S QR+ WFA GELKL++D VL +Q++L+L+ ++ RF+ +G+ +F AL+ + K+L L F++ RFHPLA+ + + D +G+ ++ W +E+L+E + L+ +LPSTL A+LRDYQ GF W+ RLAHW GACLAD MGLGKT+Q LAV+L A +GP L++APTSVC NW++EA +FAPTL + +F +R ++ GL P D+++ SYGL+ E + +L+ VQW T++ DEAQA+KN RS+AA L +NF+++ TGTPIENHLGELW+LF+ INPGLLG+ + F Q+F +P+E + D+ A+ +LK L+ PF+LRR K+QVL ELPSRTEI VE S EEKAFYEALRRQA+ L + G + ++LAEI +LRRACC+P LV P ++ SKL+ ++ EL++N HKALVFSQFVDHL +IR L++QG++YQYLDGST+V +R+ VD FQAG GD+FLISLKAGG+GLNLTAADYVIH DPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ TIEEKI+ LHQ KR+LADSLL G +++ + E +L L+ + Sbjct: 185 FDADWFKTLPLGLYERGISSILFNSALKLSACEDALTLLEEECPTPGKHCSDYLHLILTEQLLLQGCTQEAQESLERVSNEYQNNAAIFWGWLSFLRGENEQAIKYYTDALKASKKATGKRQIYFNTMGGLFFILALLKDGSVQRLKEAEEYSSLMSRQGDHWLRFTYGRLNMVLQVQLGDITQKQ-FVVSG----HISSVEEENSLQTLFCSLCLYWMDAESAKKRLPNLLEPLYRRSLASGYHWLAMETAELLSRLKPSSNYNQLAPALREDSNIQTIVDLIRPQEAWEMCLNALANLQSRPQTSLKSE---SELRLAWFITFYPSRCVLQPREQKVNVKGEWSKGRPIALKRLNSALSEFDYITPQDMRVCSCIEV---YSEGYYGKVDYTFGEKAISALIGHPLVFWEDTPTIRVEIVKGEPELLVKKGKLDRLTLEFSPKLPE-SQNILHIKETPTRIKVIEITAEHRRIAEIIGKDNKLNVPAFAEKQVLAAINAVSGIVTVHSDIGGGL-EGAEEVPAQTLPHIHLLPANVGLKISLLSRPFAQGGPYYRPGTGGETVIAEIDGKRLQTRRNLPQEKQLAKAAIKACPTLTRTEEQDGEWVIADPEDCLELLLELQALGSNVVIEWPQGEKLRV--SHNADLKDFNLSIQRQQDWFAATGELKLNNDLVLDMQQLLELLEKTPSRFIPLGDGQFLALTQAFRKRLDELRMFSEKHSSCIRFHPLATLGLEDFV-DEVGKVKADKHWKAHRERLKEVQNLQPELPSTLLAELRDYQMEGFCWLARLAHWGVGACLADQMGLGKTLQALAVILRNAHEGPTLIIAPTSVCMNWVSEAQKFAPTLNIIQFSGANRQKLLDGLQPLDMLICSYGLLQQEEVAQMLSGVQWQTIVLDEAQAIKNMTTKRSQAAMNLKSNFKLLTTGTPIENHLGELWNLFRFINPGLLGSFESFNQRFATPIEKYQDKLARNKLKKLIQPFLLRRTKNQVLEELPSRTEILLHVELSREEKAFYEALRRQAISKLTETDAEAGKKHLQVLAEIMKLRRACCNPSLVMPDTELRSSKLQLFGEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGISYQYLDGSTSVSERKKRVDAFQAGSGDVFLISLKAGGTGLNLTAADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVQLHQHKRDLADSLLSGADISGKISTEVLLQLISE 1402
BLAST of helicase snf2 vs. nr
Match: gi|657930402|ref|WP_029631608.1| (ATP-dependent helicase [[Scytonema hofmanni] UTEX B 1581]) HSP 1 Score: 897.886 bits (2319), Expect = 0.000e+0 Identity = 529/1269 (41.69%), Postives = 739/1269 (58.23%), Query Frame = 0 Query: 119 FERTLT-AWDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAY----CAEHASEERPAFRAMYAVSLVLTGASVQL-ESLNVASSSWLASAA---GFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIAKLQKADDPYS----DSPERLMVVDAAERLL------------FLHSGRPKRNIEGRENIGAISCLITASHSRWFDVEPTAKEL-EVLQGIRDDVEHYGLPWHVAQLDAALNKNSASNDSYL-------------AIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIG---EEFELEPREQK-RGKGGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYD-KEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVL-AQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDG-LRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTD--WLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDG---RFHPLASGAIAELTQDM-LGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTA----------------------MISGLGPRDVVVSSYGLMHSE--STLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEH-GDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 FE+ T +D WF TLP + + + A + P + A CA + + L+L G + ESL S + A AA G++ F AI +T +K K+ G R LF+ L+LL+ G ++SL Q+A D S S L + A ++L F+ S R I E ++ L A W D + K L +L+ G W +A A L N SY +I ++++P W+M LNAL + P+ + +E R+AWFI + L+PREQK KG WSKGR +A+ RL FD+L+P D R+C CI +D YGY K F+ +A+ A +GHP VFW D VE+ + PEL+V + E+L L +P++ + S++++ + ++ V +S +H IA I+G + L VP +A +QVL +I+A++ ++TV SDIGGG+ +E V T H+ + PA GL++ L RPF + GP + PG GG VI+EIDGKR+++ R+ E+ NA ++ P + D WL+EDPE LE L L+ + +VL WP+G L + +I Q++WFA GELKLD D VL +Q++L+L+ ++ RF+ +G+ +F AL+ + K+L L F++ RFHPLA+ + +L +++ + ++ W E+L+E + L+ +LPST A+LRDYQ GF W+ RLAHW GACLAD MGLGKTVQ LAV+L A +GP L++APTSVC NW++EA RFAPTL + +FG DR +++ L P D++V SYGL+ E S +L+ VQW T++ DEAQA+KN RS+AA L +F++I TGTPIENHLGELW+LF+ INPGLLG+ + F Q+F P+E D+ A+ +LK L+ PF+LRR K+QVL ELP+RTEI VE S EE AFYEALRR+A+ L E G++ ++LAEI RLRRACC+P LV P ++ SKL ++ +L++N HKALVFSQFVDHL +IR LDKQG+NYQYLDGST +R+ VD FQAG GD+FLISLKAGG+GLNLTAADYVIHMDPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ TIE+KI+ LHQ KR+LADSLLEG +++ + E +L+L+ Sbjct: 177 FEQVCTNPFDADWFRTLPQELYDSCISIILINAALLC---SPADVAFALLQEECATSSGHSSDYLHLILTEQLLLRGCIQEAQESLECISDDYQAEAAVYKGWLNFLRGNNQQAIANYTAGLKALKKATGKRQVYFSTMGGLFFILALLKDGSRDSL------QEALDYTSLLARQSDHWLRSIYAQLKILLQVQLGDIAQKEFILSNR----ILFPEEHNSLETLFFALCHYWVDADRAKKHLPRLLEEFYQQAVTSGYHW-LAMESAELLSRLKPNSSYETQAEILGEDIGIDSIIDVMQPQEPWEMCLNALANLQKEPQAAVKAE---AELRLAWFITFYPSKCILQPREQKVNAKGEWSKGRPIAIKRLSGNLGEFDYLTPQDIRVCGCIETFTSYD-YGYHGKTEYTFSAKAISALIGHPLVFWEDAPTTRVEIVKGEPELIVKKGKRERLTLEFSPKL-EASQNILAVKETPTRIKVIEISAEHRRIAEIIGKENRLNVPATASKQVLAAINAVSGIVTVHSDIGGGM-AGSEEVPAQTIPHIHLLPANAGLKVSLLSRPFAQGGPYYRPGAGGETVIAEIDGKRLQTRRNLHEEKQLANAAIKACPTLTRAEAQDGEWLIEDPEDCLELLLELQALLDTVVLEWPEGEKLRVKHQADLKDFQMSIQRQQDWFAATGELKLDKDLVLDMQQLLELLDKTPSRFIPLGDGQFLALTQAFRKRLDELRAFSEKHSKGIRFHPLATLGLEDLVEEVGIQKADKHWKAHIERLKEVQSLQPELPSTFQAELRDYQMEGFSWLARLAHWGVGACLADQMGLGKTVQALAVILRNAHEGPTLIVAPTSVCMNWVSEAQRFAPTLNIIQFGGSDRVGVGETSRRETSRKEASSTGSRQQLLNNLQPFDMLVCSYGLLQQEEVSQMLSQVQWQTIVLDEAQAIKNMTTKRSQAAMNLKGSFKLITTGTPIENHLGELWNLFRFINPGLLGSFESFNQRFAIPIEKFQDKLARNKLKKLIQPFLLRRLKNQVLEELPNRTEILLHVELSREEMAFYEALRREAISKLTESEATAGHKHLQVLAEIMRLRRACCNPSLVMPDTELSSSKLHLFAEVLGDLLENRHKALVFSQFVDHLHIIRDYLDKQGINYQYLDGSTPAPERKKRVDAFQAGSGDVFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVDLHQHKRDLADSLLEGTDISGKISTEALLELI 1425 The following BLAST results are available for this feature:
BLAST of helicase snf2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 21
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BLAST of helicase snf2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of helicase snf2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2_size2283618:717001..720945+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2_size2283618-processed-gene-7.8 ID=snap_masked-scaffold2_size2283618-processed-gene-7.8|Name=helicase snf2|organism=Tigriopus kingsejongensis|type=gene|length=3945bp|location=Sequence derived from alignment at scaffold2_size2283618:717001..720945+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'helicase snf2' has the following synonyms
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