helicase snf2, snap_masked-scaffold2_size2283618-processed-gene-7.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000008498 (supercontig:LSalAtl2s:LSalAtl2s524:101535:104062:-1 gene:EMLSAG00000008498 transcript:EMLSAT00000008498 description:"maker-LSalAtl2s524-augustus-gene-1.41") HSP 1 Score: 239.58 bits (610), Expect = 3.777e-66 Identity = 171/566 (30.21%), Postives = 263/566 (46.47%), Query Frame = 0 Query: 837 QQEKLQEARELELQLPSTL-GAQLRDYQFAGFDWMMRLAHWEAG--ACLADDMGLGKTVQILAV---LLARAEDGPALVLAPTSVCTNWINEAARFAPTL-----------RMHRFGDGDRTAMISGL--GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQF----ISPMEHGDQYAKQR-------LKALVAPFILRRHKSQVLTELPSRTE------------------INRVVEA--------------------SEEEKAFYEALRRQALDDL-----------AAPEEATGNQR---------FKILAEITRLRRACCHPRLVSPAVDIEGS-------------KLKELMNIVEEL-VDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAA 1299 ++ +L E +E+ P + G +RDYQ GF WM L WE G LAD+MGLGKT+Q +++ L+ +GP LV+AP S NW+NE RF P + R F A ++G+ G + V V+SY ++ + L + W ++ DE LKN + K + +++ TGTP++N++ ELWSL + P + F+ F I E+ +R L +++PF+LRR KS + ++P + E IN+ ++ +K +Y L ++DD + +TG QR F LR+ HP L+ + +G+ KLK L ++ EL V HK L+FSQ L ++ L QG ++ LDGS +++RQ + +F + +IFL+S +AGG G+NLTAAD VI D WNP + QA DR HR+GQ RPV IYRL+ A TI+E+I+ + KR L ++ +E + Sbjct: 167 KKHRLFEGKEIPDDQPLLVKGGIMRDYQIKGFQWMCSL--WENGINGILADEMGLGKTIQTISLFAHLIEMGVEGPFLVVAPLSTLGNWVNEFKRFTPDIPVVLFHGNLEKRKELFRRLKDVAHVTGIRGGIKSVFVTSYEIILNSRKLFKNMNWKYIVVDEGHRLKNFKCRLIKELKMYHTANKLLLTGTPLQNNMAELWSLLNFLMPEIFNDLNMFQSWFSVEKIQANENDSISMSERETKVLTTLHQILSPFLLRRIKSDIELKIPPKKEVLVYCPMTAYQTNLYKATINKTLKTLLEDSETSDSSSKEDLIRSNRRPKKMYYSELNDASIDDTINRRNEAMVWKNGVDVSTGCQRNAPRNSVLNFSNKNITMDLRKITNHPYLIEYPLSEDGNFYRSDKDMIDACGKLKVLDQLLNELIVKRNHKVLIFSQMTKMLDILEDYLQLQGFSHVRLDGSMKLEERQENIHNFSSSSDLNIFLLSTRAGGLGINLTAADTVIIYDSDWNPQQDLQAQDRCHRIGQTRPVMIYRLVTANTIDERIVQIASSKRRLEKMVIHEKEFKS 730
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000001280 (supercontig:LSalAtl2s:LSalAtl2s1211:177823:184435:1 gene:EMLSAG00000001280 transcript:EMLSAT00000001280 description:"augustus_masked-LSalAtl2s1211-processed-gene-1.3") HSP 1 Score: 244.202 bits (622), Expect = 1.234e-65 Identity = 173/562 (30.78%), Postives = 267/562 (47.51%), Query Frame = 0 Query: 801 LADFADDDGRFHPLASGAIAELTQDM---LGESSSEWNLQQ------EKLQEARELELQLPSTLGAQ-------------LRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLA--------RAEDGPALVLAPTSVCTNWINEAARFAP----TLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPM------------EHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALR-RQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSK----------LKELM-----NIVEE-----LVDNGHKALVFSQFVDHLKLIRTALDKQ---GVNYQYLDGSTTVKKRQAAVDDFQAGKG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSL 1291 L +D D + LAS A L + M G E N EK + R+ QL A+ LR YQ +G +W+ L ++ L DDMGLGKT+Q + +L E+ P+LV+ P ++ +W E +F + ++ +R++ + + +++++SY ++ + L ++WN +I DE +KN +A + A +L++N R+I +GTPI+N + E+WSLF + PG LG++++F +F P+ + A + L + PF+LRR K VL +LP + + + S + YE +Q LDDL + I + LR+ C HP+LVS + + S+ LKEL+ IVE + + H+AL+F Q + ++ L K V Y LDGS R V F DI L+S GG GLNLT AD VI + WNP + QA DRAHR+GQ + V +YRLI TIEEKIL L + K + A+++ Sbjct: 1050 LGRMSDTDSQVRLLASNCFATLVRLMPLDSGXXDKEXNCDLFSKEILEKKKSERKFIHQLMDAKNAEYFHIPERVMDTELLRSYQRSGVNWLAFLNRYKLHGILCDDMGLGKTLQSICILAGDHYNRINQNMENIPSLVICPPTLRWHWKEEILKFTKGKFLSPLLYNGNTVNRSSTRTFIEKNNILITSYDIVRKDIEFLKEIKWNYIILDEGHIIKNAKAKTTIAIKSLSSNHRLILSGTPIQNSVLEIWSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLHRQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEYTLKQKLDDLDX-NSIKPTSKSHIFQALQYLRKVCNHPKLVSNELSVTQSQDISVAAKLPALKELLLECGIGIVEGEDNQLCLASQHRALIFFQLKSMIDIVENDLLKNLMPSVTYLRLDGSVPTNMRHEIVQRFNNDVSIDILLLSTSVGGLGLNLTGADTVIFAEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTIEEKILGLQKFKLKTANTV 1610
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000011974 (supercontig:LSalAtl2s:LSalAtl2s851:141371:144613:-1 gene:EMLSAG00000011974 transcript:EMLSAT00000011974 description:"maker-LSalAtl2s851-augustus-gene-0.6") HSP 1 Score: 240.736 bits (613), Expect = 2.414e-65 Identity = 156/494 (31.58%), Postives = 250/494 (50.61%), Query Frame = 0 Query: 849 LQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAED---GPALVLAPTSVCTNWINEAARFAPTLRMHRFGDG------DRTAMISGL-GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQR------------LKALVAPFILRRHKSQVLT--ELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGS---KLKELMNIVEELVD----NGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD-IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 L++P + ++L YQ W+ L + G L D+MGLGKT+QILA L + + GP L++ P ++ W+ E+ + P R+ D R A+IS + + ++V+SY + S + ++WN + E ++ P AL + A ++ R+I +G+P++N+L ELWSLF I PG LGT F QQF P+ G R L+ + P++LRR KS V + LP ++E ++E+++ Y R LD G + KI A + LR+ C HP L + ++ + M +VE L+ H+ L+F+Q L L+ + ++ +Y LDG+T+V RQ+ +D F +F+++ K GG G+NL A+ V+ DP WNP+ + QA +RA R+GQ VTIYRLI +GTIEEKI K+ L + +L+ + D+ +L Sbjct: 252 LKVPYRIWSKLYKYQKVCVQWLWELHQQDVGGILGDEMGLGKTIQILAYLASLSYSIGLGPTLIICPATLMHQWVKESHAWWPAFRIAVLHDSGSYQGKSRKALISSIFEAKGILVTSYSGVVSFKEPINSLKWNYVXLXEGHKIRKPDALXTXAVKSIPTCHRLILSGSPLQNNLKELWSLFDFIYPGKLGTLPVFIQQFSVPITQGGYSNASRVAVATAYKCATVLRDTITPYLLRRMKSDVKSHINLPEKSEQILFCRLTDEQRSCY----RSYLDSSDIQNIFEG--KSKIFAGLINLRKICNHPDLYANKNEVSKYGHWRKSGKMIVVEALLKLWKKQEHRVLLFTQSRQLLSLLEIFIQRRQYSYLKLDGTTSVSSRQSLIDKFNEDPNIFVFILTTKVGGLGVNLVGANRVVIFDPDWNPSTDTQARERAWRIGQKNQVTIYRLITSGTIEEKIYHRQIFKQFLVNRVLKDPKQKRFFKSNDLYELF 739
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000009416 (supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 215.312 bits (547), Expect = 6.598e-57 Identity = 136/475 (28.63%), Postives = 237/475 (49.89%), Query Frame = 0 Query: 855 LGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAV---LLARAED-GPALVLAPTSVCTNWINEAARFAPTLRM--HRFGDGDRTAMISGLGPR--DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALN----ANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQA--LDDLAAPEEATGNQRFKILAEITRLRRACCHPRL-------------------VSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 +G L++YQ G +W++ L + LAD+MGLGKT+Q +A+ L+ R ++ GP L++ P S +NW E ++AP+ ++ ++ G R + S + +V+V++Y + + ++L ++W +I DE +KN K LN +N R++ TGTP++N L ELW+L + P + FEQ F +P ++ PF+LRR K V ++LP + E E S ++ Y+ + + + + ++ + + + + I +LR+ C HP + P V K + + I+ +L GH+ L+F Q + +I + +G + LDG+T ++R + F D IFL+S +AGG GLNL AD V+ D WNP + QA DRAHR+GQ V + RL+ ++EE+ L+ + K + + +++ Sbjct: 401 VGGILKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWTLEFEKWAPSAQVVAYKGSPGLRRNIQSQMKATKFNVLVTTYEYVIKDKSVLAKIRWKYMIIDEGHRMKNHHC---KLTQILNTYYTSNNRILLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPF----------ATTVLRPFLLRRLKKDVESQLPDKVEYIIKCEMSALQRVVYQQMAEKGVLITEDKRDKKTSSSDKKTLRNTIMQLRKLCNHPFIFQKIEECYAKHIGLPTDIVTGPDVYRSSGKFELIDRILPKLNKTGHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKAEERADMLKIFNQKDSDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERXLAAARYKLNMDEKVIQA 862
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000001291 (supercontig:LSalAtl2s:LSalAtl2s1214:48338:54824:1 gene:EMLSAG00000001291 transcript:EMLSAT00000001291 description:"augustus_masked-LSalAtl2s1214-processed-gene-0.5") HSP 1 Score: 205.297 bits (521), Expect = 1.338e-54 Identity = 136/459 (29.63%), Postives = 225/459 (49.02%), Query Frame = 0 Query: 880 ACLADDMGLGKTVQILAVLLARAED----GPALVLAPTSVCTNWINEAARFAPTLRM--HRFGDGDRTAMISGLGPR--DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALN----ANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPM----------EHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFK-ILAEITRLRRACCHPRL-------------------VSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEG 1294 A LAD+MGLGKT+Q +A++ E GP L++ P S +NWI E ++AP++++ ++ G R S + +V+V++Y + + ++L ++W +I DE +KN K LN +N R++ TGTP++N L ELW+L + P + FEQ F +P E +RL ++ PF+LRR K V ++LP + E E S ++ Y + + + GN K ++ I +LR+ C HP + P + K + + I+ +L +GH+ L+F Q + +I + +G + LDG+T ++R + F + IFL+S +AGG GLNL AD VI D WNP + QA DRAHR+GQ V + RL+ ++EE+IL+ + K + + +++ Sbjct: 2 AFLADEMGLGKTIQTIALITYLMEKKKNMGPYLIIVPLSTLSNWILEFGKWAPSVQIVPYKGSPGSRRKAQSQMRATKFNVLVTTYEYVIRDKSVLAKIRWKYMIIDEGHRMKNHHC---KLTQILNTYYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAVTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSALQRVIYSQMAETGVLITEDRRDRKGNSGTKALMNTIMQLRKLCNHPFMFQKLEEAYAKHTGLPTNIVTGPDLYRSSGKFELIDRILPKLKKSGHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKSEERGEMLATFNEKNSEYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 457
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000004539 (supercontig:LSalAtl2s:LSalAtl2s237:482549:485751:-1 gene:EMLSAG00000004539 transcript:EMLSAT00000004539 description:"augustus_masked-LSalAtl2s237-processed-gene-4.3") HSP 1 Score: 199.904 bits (507), Expect = 1.632e-52 Identity = 127/432 (29.40%), Postives = 226/432 (52.31%), Query Frame = 0 Query: 901 RAEDGPALVLAPTSVCTNWINEAARFAPTLR-MHRFGDGD-RTAMISGL---GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVD----------IEGS-KLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLL-EGR--EVAASVDVEDMLDLLQ 1311 R++ GP +VL P + NW+NE ++ PTLR + GD + R I G DV+V+S+ ++ E ++ W ++ DEA +KN + S + R++ TGTP++N+L ELW+L + P + + F++ F + GD +RL ++ PF+LRR KS V L + E N + S+ ++ +Y + + D+ A ++ ++ + +LR+ HP L A +E S KL+ + ++ +L + + L+F+Q L ++ +G +Y +DG T+ + R +D++ + IF++S +AGG G+NL AD VI D WNP + QA DRAHR+GQ + V ++RL+M T++EKI+ K L ++ +GR + +++ +DML++++ Sbjct: 108 RSDPGPHMVLVPKTTLANWMNEFKKWCPTLRAVCLIGDQETRNKFIRDTMMPGGWDVLVTSFEMLLREKSVFKKFTWRYMVIDEAHRIKNEESKLSLIVREIKTTNRLLLTGTPLQNNLHELWALLNFLLPEVFSSSNDFDKWFNTDTCLGDDSLVKRLHGILKPFVLRRLKSDVEKSLLPKKETNIYMSLSKMQREWYTKI---LMKDIDIVNGAGKVEKMRLQNILMQLRKCVNHPYLFDGAEPGPPYTTDEHLVENSGKLQVIDKLLPKLKEQESRVLIFTQMTRILDILEDYCWFRGYSYCRIDGQTSHEDRVRQIDEYNMPNSEKFIFMLSTRAGGLGINLYTADIVILFDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVMENTVDEKIVERAAIKLRLDRMIIQQGRISDQKQNINKDDMLNIIR 536
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000010320 (supercontig:LSalAtl2s:LSalAtl2s683:133039:146718:1 gene:EMLSAG00000010320 transcript:EMLSAT00000010320 description:"maker-LSalAtl2s683-augustus-gene-1.38") HSP 1 Score: 198.749 bits (504), Expect = 1.755e-51 Identity = 143/460 (31.09%), Postives = 227/460 (49.35%), Query Frame = 0 Query: 858 QLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLL----ARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMI---------SGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGS-------KLKELMN----------IVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQ-AGKGDI-FLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQK 1284 +LRDYQ G +W++ + LAD+MGLGKT+Q + L GP LV+ P S W E AR+AP + + + GD ++I + + ++++Y ++ + L V + ++ DEA LKN ++ K L R++ TGTP++N L ELWSL I P +F +QF + Y K L L+ P+ILRR K V LP++ E V+ S ++K FY+ + + + AA + + + L++ C H L P +I+ + KL+ L+ ++ L + GH+ L+FSQ V L ++ L+ + ++Q LDG + R+ A++ F G D FL+S +AGG G+NL AD VI D WNP + QA RAHR+GQ V +YRL+ ++EE I+ ++K Sbjct: 475 KLRDYQLDGINWLVHAWCKQNSVILADEMGLGKTIQTVNFLYYLFHTHQLYGPFLVVVPLSTLDAWQREFARWAPDINVLSYVGDVASRSIIREYEWTHPGNKRSKFNAILTTYEIVLKDKQFLINVPYAVIMVDEAHRLKNDDSMLYKCLQDLTVYQRLLITGTPLQNSLKELWSLLHFIMPDKFDRWDEFNEQFGTSSAEKRGYTK--LHKLLEPYILRRVKKDVEKSLPAKVERILRVDMSRKQKQFYKWILTR---NYAALTKGIKGSTVSFVNIVMELKKCCNHILLTRPE-EIDNTFTMSREEKLQFLLRGSGKLLLLDKLLVRLRETGHRVLIFSQMVRVLDILAEYLELRRFSFQRLDGGIKGELRKQALEHFNNPGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKDQVNVYRLVTMNSVEEDIIERAKKK 928
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000000421 (supercontig:LSalAtl2s:LSalAtl2s1067:62002:65123:-1 gene:EMLSAG00000000421 transcript:EMLSAT00000000421 description:"maker-LSalAtl2s1067-augustus-gene-0.15") HSP 1 Score: 194.897 bits (494), Expect = 2.274e-51 Identity = 152/525 (28.95%), Postives = 248/525 (47.24%), Query Frame = 0 Query: 854 TLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG---PALVLAPTSVCTNWINEAARFAPTLRMHRFGDGD------RTAMISGLGPRDVVVSSYGLMHS---ESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQ------YAKQRL---KALVAPFILRRHKSQVLTELPSRTE-INRVVEASEEEKAFYEAL---RRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLI------RTALDKQGV--------------NYQYLD-----------------------------------------GSTTVKKRQAAVDDF-QAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSL 1291 T +L+DYQ G +W++ + LAD+MGLGKTV ++ L E G P L++ P+S NW E + P+L + ++ R ++ D+++++Y ++ S + +L + ++ ++ DEA LKN R + + A +++ TGTP++N+L EL SL + P L +K ++ S + Y ++R+ K ++ PF LRR K V+ LP + E + ++ S + + +++ + + +A L + +A+ N+ I + LR+ HP L+ D +KLK+L NI++ D HK V VD L ++ +T L + + ++YLD GST V +RQ +DDF Q IF++S KAGG G+NLT+A+ VI D +NP + QA DR HR+GQ RPV+I RLI GTIEE I S+ Q+K +L L Sbjct: 272 TTKLKLKDYQMIGLNWLVLMHKQSLNGVLADEMGLGKTVXAISFLAHLKETGNSKPHLIVVPSSTMDNWEKEIETWCPSLSIVKYYGSQEERQKIRYDLVRENLEYDILLTTYSMVVSSAEDKSLFKKISFHYVVFDEAHMLKNMSTSRYENLMRVKAPRKLLLTGTPLQNNLVELMSLLVFVMPELFANKKDLLKKVFSLFPKASEKQSRSNYEQERIAHAKHIMKPFFLRRLKVDVIKNLPPKNERVEKLPLTSRQHEHYFKLVSVYKEKA--KLLSEGKASSNEDSGI-GMLMNLRKTANHPLLIRSHYD--ENKLKKLANILKN--DPSHKNAVEKFIVDDLGIMSDYDIHKTCLLYKCIEDFRLSNEYICESGKFEYLDKLLPKMKENDDRILLFTQFTMVLDIIEDYLKIRGHNYIRLDGSTPVTERQYLIDDFNQDSSIFIFILSTKAGGLGINLTSANTVILHDLDFNPYNDKQAEDRCHRVGQTRPVSIIRLISEGTIEEGIYSVAQEKLKLEQDL 789
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000010789 (supercontig:LSalAtl2s:LSalAtl2s714:242685:269290:-1 gene:EMLSAG00000010789 transcript:EMLSAT00000010789 description:"maker-LSalAtl2s714-augustus-gene-2.35") HSP 1 Score: 190.66 bits (483), Expect = 8.878e-49 Identity = 143/482 (29.67%), Postives = 225/482 (46.68%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILA---VLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMIS---------------GLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRF-KILAEITRLRRACCHPRLVSPA-------------VDIEGSKLKELMNIVEELV----------DNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLE 1293 G QLR YQ G +W+M + LAD+MGLGKT+Q LA +L GP LV+AP S NW E ++ + G M+S G+ ++++Y + ++ L ++W + DEA LKN + + L+ R++ +GTP++N++ EL+SL + P +Q+ F ++F M++ Q K L+AL+ P +LRR K V L + E VE + +K +Y + + L+ + T N ++ + LR+ C HP L++ A D EG L ++V + GH+ L+FSQ V L ++ L ++ ++ +DG RQAA+D + D +FL+ KAGG G+NL AD I D WNP + QA R HR+GQ + V IYRLI T E ++ K L ++L+ Sbjct: 1418 GNQLRPYQLEGVNWLMFSWYNGRNCLLADEMGLGKTIQSLAFVDAILNYGIRGPFLVIAPLSTIPNWQREFELWSNMNVIVYHGSQTSRNMLSEYEMYYKDENGERIPGVYKFHCLITTYECVITDILELREIKWRACVIDEAHRLKNKNCKLLEGLSLLDLETRLLLSGTPLQNNINELFSLLSFLEPSQFNSQEAFIKEF-GDMQNEAQVTK--LQALLKPLMLRRMKEDVEKSLKPKEETIVEVELTNMQKKYYRGILEKNFSFLS---KGTSNANVPNLMNTMMELRKCCIHPYLLNGAEEQIQEEYRSMHDNDPEGVYFNSLTRSSGKMVLLDKLLPKLKEGGHRVLIFSQMVKMLDILEDYLIRKKYQFERIDGRIRGNLRQAAIDRYCRPDSDRFVFLLCTKAGGLGINLVXADTCIIYDSDWNPQNDLQAQARCHRIGQSKMVKIYRLITRNTYEREMFDKASLKLGLDKAVLQ 1893
BLAST of helicase snf2 vs. L. salmonis genes
Match: EMLSAG00000000885 (supercontig:LSalAtl2s:LSalAtl2s1153:27270:31467:1 gene:EMLSAG00000000885 transcript:EMLSAT00000000885 description:"snap_masked-LSalAtl2s1153-processed-gene-0.34") HSP 1 Score: 182.956 bits (463), Expect = 6.516e-48 Identity = 148/525 (28.19%), Postives = 238/525 (45.33%), Query Frame = 0 Query: 855 LGAQLRDYQFAGFDWM------MRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGP--------ALVLAPTSVCTNWINEAARF----APTLRMHRFG----DGDRTAMISGLGPRDV---VVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-------DQYAK-----QRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLV----------------------------SPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGRE-VAASVDVEDMLDLLQ 1311 L LR +Q G +M +R+ G +A +MGLGKT+Q + ++ + P A+V+ P+S+ NW NE +++ L M D D + I+ G R V ++ SY S++L + ++ DE LKN L ++ + + RV+ +GTPI+N L E +SL +N GLLGT ++F ++F +P+ G D + K Q + +V I+RR ++ + LP + E V+ ++ +K Y++ R D + + + F L IT L++ HP L+ PA + S L L+ V+ + K ++ S + L L + + LDGS ++KKR VD F IF++S KAGG GLNL A+ ++ DP WNPA ++QA R R GQ + IYR + GTIEEKI K+ L+ +++ E V V D+ +L + Sbjct: 138 LTKVLRPHQREGVKFMYDCVTGIRIPE-NYGCIMAXEMGLGKTLQCITLMWTLLKQSPECKPTIEKAIVVCPSSLVKNWYNEISKWLGGRVQPLAMDGGSKDSIDKDLSGFINTYGRRPVNPILIISYETFRLHSSVLQSGEVGLVLCDEGHRLKNSENLTYQSLMGIKSKRRVLLSGTPIQNDLLEYFSLIHFVNEGLLGTAQEFRKKFENPILRGRDADATDDDHKKGVQKLQEMAEVVNRCIIRRTQALLSKYLPVKYEQVICVQLTDLQKDIYQSFCRS--DTIRKNLKGSEKVGFSPLRAITSLKKLVNHPDLIYNVCKEGHEGFEKSLXYYPANYXPNGRLXPAYSGKLSVLDCLLAFVKNCSTD--KVVLVSNYTQMLDLFERLCSLRNYGFVRLDGSMSIKKRAKVVDKFNDPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRFLAVGTIEEKIFQRQAHKKALSSCVVDQEENVEKHFSVTDLKELFK 657
BLAST of helicase snf2 vs. SwissProt
Match: gi|82209540|sp|Q7ZU90.1|CHD1L_DANRE (RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like) HSP 1 Score: 239.195 bits (609), Expect = 1.820e-63 Identity = 162/462 (35.06%), Postives = 247/462 (53.46%), Query Frame = 0 Query: 855 LGA-QLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVL-LARAE---DGPALVLAPTSVCTNWINEAARFAPTLRMHRF-GDGDRTAMIS---GLGPR-DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPME--HGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRL---VSPA--------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLE 1293 LGA LR YQ G W+ + G L D+MGLGKT Q +++L AR +GP LVL P +V NW E RF P+L + + GD ++ A + PR V++++Y + ++ L +W L+ DEA LKN +L + FRV+ TGTPI+N+L E++SL I P + + + F++ + L ++ PF+LRR K++V ELP +TE+ S +K +Y+A+ + LD + + + ++L + +LR+ HP L V P V+ G KL L +++ L + GH L+FSQ L +++ L+ +G +Y+ LDGS ++R A+ +F IFL+S KAGG G+NLTAAD VI +D +NP + QA+ RAHR+GQ RPV + RL+ TIEE I S K L D+++E Sbjct: 30 LGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAV--EDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQ----STKTRLLNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASG-KLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIE 484
BLAST of helicase snf2 vs. SwissProt
Match: gi|6647560|sp|Q24368.1|ISWI_DROME (RecName: Full=Chromatin-remodeling complex ATPase chain Iswi; AltName: Full=CHRAC 140 kDa subunit; AltName: Full=Nucleosome-remodeling factor 140 kDa subunit; Short=NURF-140; AltName: Full=Protein imitation swi) HSP 1 Score: 238.81 bits (608), Expect = 2.339e-63 Identity = 147/482 (30.50%), Postives = 249/482 (51.66%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVL----LARAEDGPALVLAPTSVCTNWINEAARFAPTLR-MHRFGDGD-RTAMISGL---GPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPA-----------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREV----AASVDVEDMLDLLQ 1311 ++RDYQ G +WM+ L LAD+MGLGKT+Q +++L + + GP +V+ P S NW+NE ++ P+LR + GD D R I + G DV V+SY + E ++ W L+ DEA +KN ++ S+ R++ TGTP++N+L ELW+L + P + + + F++ F + GD RL A++ PF+LRR K++V L + E+ V S+ ++ +Y + L D+ A ++ ++ + +LR+ HP L A + K+ L ++ +L + G + L+FSQ L ++ + NY LDG T + R + +F +F++S +AGG G+NL AD VI D WNP ++ QA DRAHR+GQ + V ++RLI T+EEKI+ + K L +++G + + ++ ++ML++++ Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKV---LLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIR 603
BLAST of helicase snf2 vs. SwissProt
Match: gi|730465|sp|P40352.1|RAD26_YEAST (RecName: Full=DNA repair and recombination protein RAD26; AltName: Full=ATP-dependent helicase RAD26) HSP 1 Score: 239.195 bits (609), Expect = 2.943e-63 Identity = 162/544 (29.78%), Postives = 258/544 (47.43%), Query Frame = 0 Query: 848 ELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG----PALVLAPTSVCTNWINEAARFAPTLR---MHRFGDG------------DRTAMISGLGPRD----------------------------------VVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQR-------------LKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFY-EALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAV-----DIEGSKLKELMNIVEELV----DNGHKALVFSQFVDHLKLIRTAL-----DKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 + ++P + + L +YQ W+ L G + D+MGLGKT+Q++A + A G P L++ P +V W NE + P LR +H G G D +I P D +++++Y + S L V+W + DE ++NP + S L + R+I +GTPI+N+L ELWSLF I PG LGT F+QQF+ P+ G YA L+ L++P++LRR K+ V +LP + E+ + ++ +++ Y E L L+ + N + +L I LR+ C HP L+ D K M +V++L+ G+KAL+F+Q L ++ + D +NY +DG+T +K RQ+ VD F D+FL++ + GG G+NLT A+ +I DP WNP+ + QA +RA R+GQ R V+IYRL++ G+IEEKI K+ L + +L + + ++ DL Sbjct: 286 QFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGG-YANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQ-------NGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLF 821
BLAST of helicase snf2 vs. SwissProt
Match: gi|75193642|sp|Q9S775.1|PKL_ARATH (RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein CHROMATIN REMODELING 6; Short=AtCHR6; AltName: Full=Protein GYMNOS) HSP 1 Score: 236.498 bits (602), Expect = 6.297e-62 Identity = 153/505 (30.30%), Postives = 259/505 (51.29%), Query Frame = 0 Query: 852 PSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDG--PALVLAPTSVCTNWINEAARFAP---------------TLRMHRF--------GDGDRTAMISGLGPR-----DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRL---VSPAVDIEGSKLKELM----------NIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQ 1311 P L L YQ G +++ + LAD+MGLGKT+Q +A+L + E+ P LV+AP S NW E A +AP +R H F ++ IS + DV+++SY +++ +S +L P++W +I DE LKN + + ++N R++ TGTP++N+L EL+ L ++ G G+ ++F+++F + +Q + RL ++AP +LRR K V+ ++P + E+ V+ S +K +Y+A+ + L G + + + LR+ CCHP + V P + K+L+ ++ +L + GH+ L+++QF L L+ + Y+ +DG +RQ +D F A + FL+S +AGG G+NL AD VI D WNP + QA RAHR+GQ V IYRLI GTIEE+++ L ++K L + L+ G+ +++ E++ D+++ Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQEEQIS--RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLT----KKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVL-EHLVVGKLKTQNINQEELDDIIR 762
BLAST of helicase snf2 vs. SwissProt
Match: gi|74676479|sp|Q08773.1|ISW2_YEAST (RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2; AltName: Full=Imitation switch protein 2) HSP 1 Score: 232.261 bits (591), Expect = 5.886e-61 Identity = 152/487 (31.21%), Postives = 255/487 (52.36%), Query Frame = 0 Query: 856 GAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVL----LARAEDGPALVLAPTSVCTNWINEAARFAPT---LRMHRFGDGDRTAMISG---LGPR-DVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQ-YAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQ--RFKILAEITRLRRACCHPRLVSPA-----------VDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGD--IFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLE---GREVAA-SVDVEDMLDLLQ 1311 +LRDYQ G +W++ L + LAD+MGLGKT+Q ++ L + +GP L++ P S NW E ++ P L +H GD D A I L R DV+++SY ++ E L + W ++ DEA +KN ++ S+ + R++ TGTP++N+L ELW+L + P + G + F++ F DQ Q+L +++ PF+LRR K+ V L + E N V ++ + +Y++L + +D A A G + + ++L + +LR+ C HP L A + K+ L +++ L + G + L+FSQ L ++ + Y +DGST+ ++R A+D++ + +FL++ +AGG G+NL AD VI D WNP + QA DRAHR+GQ + V +YR + IEEK++ QK L +++ G++ A+ +D+LD++Q Sbjct: 181 SGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLH--GDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDID---AVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQ 662
BLAST of helicase snf2 vs. nr
Match: gi|1199220824|gb|OUR87942.1| (hypothetical protein A9Q81_24855 [Gammaproteobacteria bacterium 42_54_T18]) HSP 1 Score: 964.14 bits (2491), Expect = 0.000e+0 Identity = 566/1369 (41.34%), Postives = 784/1369 (57.27%), Query Frame = 0 Query: 1 MITALGWLLDGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASPDTF------RGIYSIYQKRYNRFGHPILT----DELMRNAYYLGETNALFHYAC-QKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIV-DLRPYLSSMAYCAEHASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASAAGFIA---FATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIAK-LQKADDPYSDSPERLMVVDAAERLLFLHSGRPKRNIEGRENI-----GAISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPWHV------------AQLDAALNKNSASNDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIGEE-----FELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCIN-----IVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSES-------LVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGD----GDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEH-GDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQDQ 1313 ++ LGW+ G LA +N +++ + G + D ++ P+I EVL R+ D +I + Y FG + D +RNA Y + A+ + C +P+ + T +D KWF+ AIQ+Q+L T I D+ Y + P F + +L GA +E L V L + G + F K A+ + +K ++ R + +FY L+L++ G K LQ + + + + V+ + +L + G+ K + + CL+ S W + +A ++++L W+ A L A + S ++VEP W+++L AL + ++ SETR+ W + ++ EL PR+QKR K G W+KGR +AL RL ER+ + L+ D+ IC+ I Y D E +A AAV HP ++W D VE++ PEL+VL +++ L L+P V + ES +V++ G N++ + + QHL I I+G GL VPL A+ QVL SI A+APLLT+ SDIGGG + + + V+ D RLH+ +Q G GL+ +++PF GPLF PG GG V +EI+GKR ++ RD E + L E+ P G +WLL+DPE ALE L L++ +E LVLSWP+G+ + L S + +R+WF L GEL +DD +V+++ +++ L+ +S GRFL + E AL+ L +L ++ F+DD G FHPLAS AI ELT+ M + W Q E++ +A+EL+ +PSTL A+LR+YQ GF W+ R+AHW AGACLADDMGLGKT+Q LA++L RA DGP LVLAPTSVC NW++E ARFAPT + FG +R +S +G DVVV +YGL+ SE+ VQW+T++ADEAQA+KNP RSKAA AL +F+++ TGTPIENHLGELW++F+ INPGLLG+ F Q F P+E+ D A+Q LK L+ PFILRR KS VLTELPSRTEI V+ SEEE YE LRRQA+D L E+ G Q K+LAEITRLR ACC+P LV P IE KLK +++EL++N HKALVFSQFV HL LIR LD++GV+YQYLDGST KKR+ AV+DFQAGKGD+FLISLKAGGSGLNLTAADYV+HMDPWWNPAVEDQASDRAHRMGQ RPVTIYR +M TIE+KI+ LHQ KR+LA+SLLEG E++ + V DML+L+ ++ Sbjct: 43 VLKGLGWV-SGSGQLLADRVNSLQKMQWFDAGLIVEAEDC--VKCSPLIEEVLTRKMEVDGVLNEVVGAAECAIPARPYRDFGGYVAAQGSEDRCLRNALYQNDVAAVLNELCIDEPFESADFPVAMPLVLMCGTPFDPKWFSQRDIAIQYQVLNTYLTYGTPSISPDICTYYDVIEALFREGKITHPNFLRLLLEQRLLRGALDDVEPLLVGVD--LVNGLGMLTWLRFLQGKAEEAVTSYQLGLKAYRKATRKRSVYITGLPAIFYVLALIKSGTAEHKKEALKCLQSIEQDFDEGETHVQSVELLQEVLMVLEGKSKAGDCYQLQVELLREAPFFCLLQVSACYWLGEDVSAAQIDMLVECCHAAFTEKWNWYAYESVALLQRLDKADLCAEILAQSQEEAFVPQFVDLVEPTSSWEIALGALQDICQKEPDSAGKADAVSETRIVWMVEKDAYSGHCELAPRQQKRKKNGQWTKGRAIALSRLYQERDQIEDLTEEDKVICEAIREEVGYGYYGRSSYYLDAE------KAFAAAVDHPNLYWADRPNTRVEIQRGEPELMVLQDGKKITLQLSP-VPSIDESHEGLLRHSMVQQEGPNRLRIIEFNRQHLHIFTIVGRKGLTVPLKAKAQVLDSIGAVAPLLTIHSDIGGGENSSIDVVDADPRLHIHLQAVGNGLKAECYIQPFSGGGPLFRPGEGGATVFAEIEGKRFQTNRDLPLEAANRAELWEQCPALGDEQG-EWLLDDPELALEVLLQLQDMQESLVLSWPKGKKIRLSREISKDQFHVTVGKKRDWFELGGELTMDDGDVIAMSQLMTLMEKSSGRFLHLENGEVLALTRDLQHRLDAMRRFSDD-GVFHPLASHAIDELTEGMDVRENPVWQQQIERINQAQELQPVIPSTLQAELREYQVEGFSWLARIAHWGAGACLADDMGLGKTIQALALMLTRAPDGPTLVLAPTSVCMNWMDEIARFAPTFKSVYFGGLLGAENRQQCLSSVGAFDVVVCTYGLLQSEAEAFAGVQWHTIVADEAQAIKNPATKRSKAAMALQGDFKMVTTGTPIENHLGELWNIFRFINPGLLGSLDSFGQLFSGPIENDNDAEARQHLKKLIRPFILRRLKSDVLTELPSRTEITLRVQPSEEESVMYETLRRQAMDRLTQSEDKAGQQHIKVLAEITRLRLACCNPELVLPDAGIESEKLKAFEAVLDELLENRHKALVFSQFVGHLSLIRKLLDEKGVHYQYLDGSTPAKKRKQAVNDFQAGKGDVFLISLKAGGSGLNLTAADYVLHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRFVMKDTIEDKIVDLHQHKRDLANSLLEGSEMSGKMSVGDMLELISEE 1397
BLAST of helicase snf2 vs. nr
Match: gi|1247480054|gb|PCJ36733.1| (helicase SNF2 [Moraxellaceae bacterium]) HSP 1 Score: 960.288 bits (2481), Expect = 0.000e+0 Identity = 565/1375 (41.09%), Postives = 797/1375 (57.96%), Query Frame = 0 Query: 1 MITALGWLLD-GQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASP-----DTFRGIYSIYQ-KRYNRFGHPI---LTDELMRNAYYLGETNALFH-YACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIV-DLRPYLSSMAYCAEHASEERPAFRAMYAVSLVLTGASVQLESL--NVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLG---DKNSLAR-IAKLQKADDPYSDSPERLMVVDAAERLLFLHSGRPKRNIEGRENIGA-----ISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPW---------------HVAQLDAALNKNSASNDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIGE-----EFELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGY--DKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTP------RVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLR------NYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFG----DGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEH-GDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 ++ +LGW + GQP LA LN + + G ++ G ++Q +I EVL R+ D + +R+ H I +RNA Y + NA+ A + + AD T +D +WF+ IQ+ +L T + ++ Y + + + P A+ +L G + L V SS+ L S +++F +I + +K ++E G D +FY LSL++ G DK R + LQK S P+ ++++ L+ + G+ K ++ + + L W + A+++++L+ R + + W HV + +L+ +AS + +V P WQ++L AL + + S R+ W I E EFEL+PR+QKR K G W+KGR VAL RL + + L+ AD+ ICD I Q + YGY + + + ++ +AAVGHP VFW ++ VE++ PEL+VL + ++ + LTP + S ++ + N++ VT + +HL I ILGP GL VP++A+ QVL SISA+APLLTV SDIGGG N + VE +TRL +Q+Q GEGL++ +V+PF GPLF PGVGG +V +EI+GK +++ RD +E+ + AL + P +WLL+DPE ALE L L+ ++ + L WP+G+ + L + + +R+WF L GEL LD+ ++++ ++ L++QS RF+ + E AL+ L ++L + F+DD G FHP+AS AI ELT+ M ++ W Q ++ +A+ L+ +PSTL A+LRDYQ GF+W+ RLA+W AGACLADDMGLGKTVQ LA++L RA DGPALVLAPTSVC NW+ E RF+PTL FG R + GP DVVV +YGL+ SE+ + +QW+T++ADEAQA+KNP RSKA AL +F+++ TGTPIENHLGELW+LF+ INPGLLG+ + F Q+F +P+E+ D KQ LK L+ PFILRR KS VL ELPSRTEI V+ S EE YE LRRQAL+ +A E G Q K+LAEIT+LR ACC+P LV P DI KLK +++EL++N HKALVFSQFV HL LIR LD +G++YQYLDGST KKR+ AV+DFQAGKGD+FLISLKAGG+GLNLTAADYV+HMDPWWNPAVEDQASDRAHRMGQLRPVTIYR +M TIE+KI++LHQ KR+LA+SLLEG E++ + + DML L+ D Sbjct: 43 ILRSLGWRSESGQP--LANRLNDELKRQWLANGL--IMDRGARIQCSLIIAEVLTREIEAAGLLQDVIEAADQVVPVRRFQYLSHSINEATKARYLRNALYRNDGNAVLEEMASCDHFQFQGADLSASLQTICNTPFDLQWFSERQWVIQYLVLAPSLTGGPDSLSSNMVSYFDVIEHLYRSGKLQHPKMFALLGAQRLLKGDRADAKELMERVESSARL-SLISWLSFLDGDVDRSIATYKLGLKELRKESGKTAVHFYDLSSIFYVLSLIKSGLPADKVEAKRCLMHLQKN----SHRPDHSLIINLLIELMAVLDGKKKISVAYSLTLNTNAPAPLWILFQVLGCYWLGEDVPAEKIDLLE--RCCCHAFDMKWMWYAYESAALLEQLGHVKKCQESLDALNASG-FVPQLMGVVIPTSSWQIALGALQDIGSTSNDKSTAIAESESERLVWIIEEDPYSDEFELKPRQQKRKKNGQWTKGRAVALSRLYRDAKDVGILTDADKAICDTI----QEEDYGYYGNTSYYLHSEKSFVAAVGHPNVFWSNQPDSPVEIQRVEPELMVLQKKNKITIQLTPIPGIDEDWGETSHFCLIRKSASNRLQVTEFTRRHLHIFNILGPQGLVVPVNAKTQVLDSISAVAPLLTVHSDIGGGSHSNIDVVEANTRLQIQLQAIGEGLKIECYVQPFVNGGPLFRPGVGGASVFAEIEGKHLQANRDIKKEKSNKLALWNQCPALAGDENDEWLLDDPEQALEVLLQLQELKELPELQDNVELLWPKGKKVKLSREITKEQFQMQVGKKRDWFELKGELTLDNGEIIAMGNLMALMQQSSSRFIHLENGEIVALTQDLKRRLDGIRRFSDD-GVFHPMASHAIDELTEGMDVRKNALWKKQLARIDQAQALQPVIPSTLQAELRDYQIEGFNWLARLANWGAGACLADDMGLGKTVQTLAIMLTRAPDGPALVLAPTSVCMNWMEEIQRFSPTLNPVYFGALTGKESRKKCLVDAGPYDVVVCTYGLLQSEAETMATIQWHTIVADEAQAIKNPLTKRSKAVMALQGDFKMVTTGTPIENHLGELWNLFRFINPGLLGSLENFRQRFSNPIENDNDSECKQHLKKLIRPFILRRLKSDVLKELPSRTEITLRVQPSPEEAVMYETLRRQALERIAKSEGGKGQQHIKVLAEITKLRLACCNPALVLPNTDIVSEKLKAFSAVLDELLENRHKALVFSQFVGHLSLIRKLLDDRGIHYQYLDGSTPTKKRKQAVNDFQAGKGDVFLISLKAGGAGLNLTAADYVLHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRFVMKDTIEDKIVNLHQHKRDLANSLLEGSEMSGKMSINDMLSLVGD 1400
BLAST of helicase snf2 vs. nr
Match: gi|1311012766|ref|WP_101081640.1| (ATP-dependent helicase [Psychromonas sp. Urea-02u-13] >gi|1304973158|gb|PKG39737.1| hypothetical protein CXF74_06685 [Psychromonas sp. Urea-02u-13]) HSP 1 Score: 954.896 bits (2467), Expect = 0.000e+0 Identity = 545/1337 (40.76%), Postives = 787/1337 (58.86%), Query Frame = 0 Query: 14 TTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASPD----------TFRGIYSIYQKRYNR-----FGHPILTDELMRNAYYLGETNALFHYACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAYCAEH----ASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIA-----KLQKADDP---YSDSPERLMVVDAAERLLFLHSGRPKRNIEGRENIGAISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPWHVAQLDAALNKNS----ASNDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIG-EEFELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGL-RMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSL--ADFADDDG-RFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEAT-GNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGRE-VAASVDVEDMLDLLQ 1311 T L++++N WR M + G +V + +I E L R+A + T R + Y+ P++ + + E C + I++ + + E +++WF A Q+Q+L + + + ++ YL C + + P F A+ A + L L + SW + + A+ F A+K +++E R L D +FY L+ L +G+ + ++A + QKA++ ++ + ++A H+ P A S LI WFD L+ + + P Q A L K S + A+ ++ P+ +WQ SL+AL + S + RM W++ ++ L PREQK K G W+KGR V+L +L ERES+D+L+ AD +IC I YG + A+ AA+ HP ++W ++ + + + P+L+V Q++ L L L P + + +++ +N + + + +H +IA IL GL VP+ A++QVL SISAIAPLLT+ SDIGGG ++N + +E DTRL++QI EG+ ++ P GE GP F PG G +ISEI+GK++++ RD +E Q ++L + PV + WL+EDP+ AL ++ L+N E+LVL W +G+ + L SA++M + + +WFALDG+L++D+ VL L+++L L+ +S GRF+ + + E+ AL+ L+++LQ L A + G FHPLAS A+ ELT M +S+ W Q KL +A +L+ +LPSTL A LRDYQ GF+W+ RLAHW+AGACLADDMGLGKT+Q LA+++ RA GP LVLAPTSVC NW +E +F+PTLR+ F DR I D+V+ SYGL+ +E LL VQ+ T++ADEAQA+KNP+A R++AA L +F++I TGTPIENHLGELWSLF INPGLLGT ++F QF + +E GD+ A +L+ L+ PFILRR K++VLTELP+RTEIN V+AS EE AFYEA RRQA++ ++ EE+ G+Q+ KILAEITRLR+ACCHP+LV+ VDI +K + + +VEEL++N HKALVFSQFV HL L++ L K+ +++QYLDGST KKRQ AV +FQAG GD+FLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQ RPVTIYR+IM +IEEKI++LH QKR+LA++LL G E V+ +DV+ ML LL+ Sbjct: 55 TLLSSIINASWRRDMMQLGL--IVEIKSAYMCHHLIAETLARKAVNNPLGSKIKMALTTRALPYHIANNYSEDIPLWKIRPLICSPTQDDLFETLELTPFSEIECSYSLSLIFSCDFADESET-----NKEWFLNTSLAFQFQVLAPILYQRSLALENIDKYLILAEKCYQQHLQKTGQHEPIFAALLAQQYLQRNQFELLPKLLSKTLSWSIAIDACLTLIKGDAEKALQQFELALKAKRKETKKRAVQLFDFENMFYLLANLVVGNTALVKKVAMKHTGQHQKANNVQLYFTFINAAQLAENSAALTTSHHTSYPI----------AFSALIRLYADYWFDDLTEISPPIALEKLLQKAQQNNFPLFTQQAQAMLAKVSDNYQQKTSEHPALYQLITPIQKWQRSLDALKNLNDSNTSESKKSSPQAGARMIWWLDRHDYSLSPREQKLSKNGQWTKGRAVSLKKLHRERESYDYLTEADLKICSHIGEYTSGGWYG--STTFELSENAIFAAINHPALYWAEDNSQNIHLTNNTPKLLVSKQNKNLKLVLQPFPE--AGTNIIKESDYN-ITLIDFNHEHHKIAEILTSKGLTVPIKAKQQVLDSISAIAPLLTIHSDIGGG-NKNTKEIESDTRLYMQISLLDEGMMKINATTSPLGELGPSFKPGQGSKVIISEIEGKQLQTTRDLKQESQQLSSLAKIAPVLFTCEDSQWLIEDPQQALITIETLQN-SEKLVLVWQKGQKIKLNKTASASNMQLKVGKKTDWFALDGQLQIDEQTVLPLEQLLTLIGESSGRFIALKKGEYLALTEQLYQQLQRLRGVSRAGNKGIEFHPLASQAMDELTDGMQLSNSAAWKKQLTKLNQAYQLQPELPSTLQATLRDYQLQGFEWLSRLAHWQAGACLADDMGLGKTLQALAIIVNRANQGPTLVLAPTSVCLNWESEVVKFSPTLRIINFSGKDRKQKIKEATCFDIVICSYGLLQTEIELLKEVQFTTIVADEAQAIKNPQAKRTQAAMQLQGDFKIITTGTPIENHLGELWSLFNFINPGLLGTLEQFNTQFSNTIEKGDEVAADQLRTLLKPFILRRLKTEVLTELPARTEINISVKASTEEIAFYEACRRQAVNRISESEESNKGSQKLKILAEITRLRQACCHPQLVNADVDISSAKQQAFIELVEELIENKHKALVFSQFVGHLALLKEVLIKRNISFQYLDGSTPPKKRQQAVSEFQAGSGDVFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRMIMENSIEEKIIALHGQKRDLANNLLSGNEKVSGKLDVDQMLALLE 1367
BLAST of helicase snf2 vs. nr
Match: gi|1232223284|gb|OYV20987.1| (SNF2 family helicase, partial [Methylococcaceae bacterium NSM2-1]) HSP 1 Score: 949.503 bits (2453), Expect = 0.000e+0 Identity = 541/1244 (43.49%), Postives = 765/1244 (61.50%), Query Frame = 0 Query: 126 WDEKWFTTLPAAIQWQ-LLGYLQTLAWMGIVDLRPYLSSMAYCAE-----------------HASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSL------ARIAKLQKADDPYSDSPERLMVVDAAERLLFLHSGRPKRNIEG---RENIGAISCLITASHSRWF-DVEP---TAKE---LEVLQGIRDDVEHYGLPWHVAQLDAALNKNSASNDSYLAIAN---------IVEPVPE---WQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIGEEFE---LEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYD-KEIAMFNGQAMLAAVGHPWVFWPDELRET--VEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFAD---DDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 +D WF +LP I++ L+ +LQ D R +L+ +A E HA E R + + + + + L + ++ + F ++ AI +F AIK K+E G R +D + F+ L+LL+ + N+L A+IA Q + + L++++A + ++ G+ + N A L A W +++P AK L L G + G W+ A + L + +N+ IA I++ +P+ WQ +L+ALT + A P + V E R+ W + + L P+EQ GK G W+KGR +AL RL + FD+LS D RIC I + ++ YGY KE + QA++AAVGHP ++W +E V++R AP+L+V Q L ++L P + ++ ++ ++ N + V +++ H ++A ILG +GL VP +AR+QV+ SI++IA +LTVQSDIGG +A V+ D+RLH+ +QP G+G+++ +FV+PF + GPL+ PGVGG V++EIDGK++++ RDF E + + P WLL+D E+ALEAL L+ + VL WP+G+ + L + F++ +++WF+++G +++DD VL +Q+++ L+ S GRFLK+ + + AL+ L ++L LA D D FHPLA+ A+ E+T M +S W Q +L E +L +LPSTL +LRDYQ GF WMMRLAHW AGACLADDMGLGKTVQ LA++L+RA GPAL+LAPTSVC NW+ E+ RFAPTL +H+FG GDR M+ GP D++V SYGL+ +E+ L W+TL+ADEAQA+KN RSKAA AL A+F++I TGTPIENHLGELW+LF INPGLLG+ +KF +++ +E+ DQ +QRLK L+ PFILRR K+ VLTELPSRTE+ VE S EE+A YEALRR A+ + + G ++ KILAEI +LRRACCHPRLV + +KL+ +V+EL+DN HKALVFSQFV HLKLIR LDK+GV+Y YLDGST V +R+ AV+ FQAG+GD+FLISLKAGG+GLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQ RPVTIYRL+ TIE+KI+ LH+ KR+LA+SLLEG EV+ + VEDM+ L++D Sbjct: 36 YDATWFASLPDQIKFHALIFFLQ--------DGRAHLNDVAVEYELLEHFFGAVKHDNSAIVHAVIEERLLRGNFKDAELWLAGDLSTDGLKLLAT---------LRFLQNRNNEAIEFFNAAIKALKKETGKRNVGIDGLHGYFFNLALLRSRNLNNLLLLKHQAQIAIRQGWQNEFY--LLNLILLEAVD----IYQGKATAEHSQYLFKTNKFAFERLFHALLLYWIGEIDPMTGNAKNSAFLAELAGFCQQAQRLGYGWYAAVSSSLLQRLDYNNEPCRQIAQQYLQSPFNEIIDLLPQVSAWQRALDALTQLTAQPATS-----VQKELRLIWSLSLDNNGVFLAPKEQSLGKSGRWTKGRPIALKRLYHDMADFDYLSEQDRRICAHIELEKEPAYYGYSSKEFYALSSQAIIAAVGHPHIYWANEESSNAPVDIRLAAPQLLVKEQQANLHISLIPPIT--TQKIMAQKTASNGLIVYVINDSHRQVAEILGKNGLIVPATARQQVIDSIASIASMLTVQSDIGG-TSSHAISVDADSRLHIHLQPVGQGIQIEMFVQPFSDGGPLYKPGVGGTTVLAEIDGKQLQTNRDFKLENRYLKEALSKCPELYAVKEPKWLLDDAETALEALLHLQELGDFAVLEWPKGKKIQLSREAGLSQAQFSVRKEKDWFSVEGAVQIDDQQVLDMQRLMSLLNTSSGRFLKLEDGQIIALTRELRQRLDDLAGLGDVQKDKVSFHPLAALALDEITNGMKITASKPWKDQLLRLSEMGDLNPKLPSTLQGELRDYQREGFQWMMRLAHWGAGACLADDMGLGKTVQALALILSRAPQGPALILAPTSVCINWLEESQRFAPTLNVHQFGSGDRQDMLDAAGPFDLIVCSYGLLQTEAERLAQKHWHTLVADEAQAIKNALTKRSKAAMALQADFKLITTGTPIENHLGELWNLFNFINPGLLGSLQKFNERYAQAIENQQDQEIQQRLKKLLRPFILRRLKNDVLTELPSRTEVTLHVELSPEERALYEALRRNAMQTMMETTDQPGQKQLKILAEIMKLRRACCHPRLVMEESTMNSAKLQAFEELVDELLDNRHKALVFSQFVGHLKLIRELLDKKGVHYHYLDGSTPVPQRKRAVNLFQAGEGDLFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQKRPVTIYRLVAKDTIEDKIVDLHKHKRDLANSLLEGGEVSGKMSVEDMMALIKD 1248
BLAST of helicase snf2 vs. nr
Match: gi|1247544496|gb|PCJ99628.1| (helicase SNF2 [Alteromonadaceae bacterium]) HSP 1 Score: 943.34 bits (2437), Expect = 0.000e+0 Identity = 585/1391 (42.06%), Postives = 801/1391 (57.58%), Query Frame = 0 Query: 1 MITALGWLLDGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASPD-TFRGIYSIYQKRYNRF----GHPILTD------ELMRNAYYLGETNALFHYACQKPYTYIWADELV-ECFERTLTAWDEKWFTTLPAAIQWQLLGYL-QTLAWMGIVDLRPYLSSMAYCAEHASEERPAFRAMYAVSLV---LTGASVQLESLN----VASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLL--QLGDKNSL--ARIAKLQKAD--DPYSDSPERL-------MVVDAAERLLFLHSGRPKRNIEGRENIGAISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGL-PWHV---------AQLDAALNK----------------NSASNDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFIGEE---FELEPREQKRGK-GGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYDK-EIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSE--SLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPV---FQLSPGTDWLLEDP----------ESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLA-APEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLL 1310 ++TAL W D L +L K + ++ + G L +S+G ++Q + EVL RQA + + R + G +TD +R YLG L + Y DEL+ + +D +WF L +Q+Q+L ++ + A +G D YL + C + FR + + L GA+ L N + +WL + G AI F +A+K ++ R + L Y LSLL + + N L +I + D DP D+ L + + +LH E E + L+ W V PT L L + G W V Q D + K NSA N ++ +++P +WQ +LNAL G+ Q +E R+ W + EE + L P+EQK GK G W+KGR +AL RL E FD++S D++IC +I ++H+ YG IA A++ GHP VFW D + VEV PEL V Q++ L L L P V D S +++V + G +++ V + QH I ILGPDGLRVPL+A+ +VL+SISAIAPLL++QSDIGGG D NA+ V+ D L++ IQP G++ L V P G GP PG G +++E++ +RV + RD +E + LV F P +DP E ALEAL L++Y E LV+ WP+G + L +SM ++ +++WFAL+GEL LDD +LS+ K++ L QS GRF+ +G+ EF L+ L ++L+ L ++ RFHPLA+ A+ ELTQ M E++ +W Q++++++A L +P TL AQLRDYQ+ GF+W+ RLAHW AGACLADDMGLGKTVQ LA++L RA DGP L+LAPTSV W+NEA RFAPTL RFG GDR M+ GP D+VV SYGL+ +E L V+W+T+IADEAQALKNP+ RS+AA +L +F++I TGTPIENHLGELW+LF+ INPGLLG+ F ++F P+E+ D +A+Q LK LV PF+LRR KS+VL+ELP RTEI V S EE FYEA+RRQA+D LA A G Q+ +ILAEI RLRRACC+P+LV P +I +KL +IV ELVDN H+ALVFSQFVDHLK+IR LD QG++YQYLDGST+ K+R+ AV+ FQ G+GD+FLISLKAGGSGLNLTAADYV+HMDPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ TIE+KI++LH QKR+LADSLLEG +++ + ++++ L+ Sbjct: 72 LLTALDWK-DDNGKLLNSLPTKALQKQLVKAGFL-TLSNG-KMQCAEELSEVLTRQACNEGIMEAVVLAAHDRSSTIKFQRGSLYMTDAGARVLRRLREVLYLGSAEELELVLRSPLFEY---DELIGKVANICCKPFDPEWFKQLDETLQYQVLHHIVENRAELGAEDPE-YLYLLTACQAQVITDPGLFRVLAHWRIAFGQLAGAAELLPKDNHWQTIRLEAWLLALLG-------DHQHAIILFEKALKAARKATQNRSTYITGIPGLCYALSLLASEKPESNKLLDKQIKLVLTGDTLDPQEDAYRALESFKDVRSSAKSVDEYTYLH--------ETAELDSEEAYLLLNLSRHWLGVSPTEAMLNHLAALTVRCHQEGRQSWFVRHSVDLLQHYQFDGSDKKSLQDIYSTNSYTDSYANSAQNSDIASLLFLIKPQNQWQRALNALQGLSQDGNEAKAAQ--QAEVRLVWQLLEEWGGWSLHPKEQKLGKRGRWTKGRNIALARLYESPEEFDYMSEQDKQICR--HIEKEHNYYGSSSFHIAT---SALVTVAGHPLVFWEDNNEKPVEVLSCDPELNVREQNKFLYLQLQPVVEDHSGEINIIVLKEGSHRLLVYQFNAQHNRILNILGPDGLRVPLNAKPEVLKSISAIAPLLSIQSDIGGG-DINAKEVDVDAHLYMLIQPYDSGMQFNLCVYPLGVDGPQLLPGDGRAMMMTEVNSERVHTMRDIGKETQEHKTLVATCTALSEFGWDPLEQDQGDDPNLVCEWHLAGEEALEALYQLQHYGEPLVMLWPKGGRIKLNSPAGVSSMRVSVRQEKDWFALEGELNLDDGQILSIAKLMALTEQSQGRFVALGDDEFIILTQQLRQRLEGLRRHGENQ-RFHPLATTALEELTQGMELEAAPQWLQQKDRIEQACALNTAVPVTLEAQLRDYQYDGFNWLTRLAHWGAGACLADDMGLGKTVQSLALILTRAADGPTLILAPTSVSMTWLNEATRFAPTLNTKRFGTGDRGDMLDKAGPFDLVVCSYGLLQTEINRLKEVRWHTIIADEAQALKNPQTKRSQAAMSLQGDFKMITTGTPIENHLGELWTLFRFINPGLLGSLNSFNKRFAVPIENKQDTHARQHLKRLVQPFMLRRLKSEVLSELPPRTEITINVPLSHEETTFYEAVRRQAIDKLANADNNQPGQQQLRILAEIMRLRRACCNPKLVDPGSNIPSAKLDAFGDIVAELVDNKHRALVFSQFVDHLKIIREYLDGQGIDYQYLDGSTSFKQREKAVNAFQNGEGDLFLISLKAGGSGLNLTAADYVVHMDPWWNPAVEDQASDRAHRLGQKRPVTIYRLVAENTIEQKIIALHAQKRDLADSLLEGSDMSGKLSAKEIMGLI 1431
BLAST of helicase snf2 vs. nr
Match: gi|1199037829|ref|WP_087143523.1| (ATP-dependent helicase [Crenothrix polyspora] >gi|1148281655|emb|SJM92739.1| SNF2-related protein [Crenothrix polyspora]) HSP 1 Score: 930.628 bits (2404), Expect = 0.000e+0 Identity = 556/1365 (40.73%), Postives = 797/1365 (58.39%), Query Frame = 0 Query: 3 TALGWLLDGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASPDTFRGIYSIYQKRYNRFGHPILTDELMRNAYYLGETNALFHY--------------ACQKPYTYIWADELVECFERTLTA-WDEKWFTTLPAAIQWQLL-GYLQTLAWMGIVDLRPYLSSMAYCAEHASEERPAFRAMYAVSLVLTGASVQLESLNVASSS-WLA---SAAGFIAFATDKPLP-----AIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLGDKNSLARIAK-LQKADDPYSDSPERLMVVDAAERLLFLHSGRPKRN--IEGRENIGAISCLITASHSRWF---DVEPTAKE--LEVLQGIRDDVEHYGLPWHVAQLDAALNK------------NSASNDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAW---FIGEEFELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYDKEIAMFNGQAMLAAVGHPWVFWPDE--LRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFAD---DDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 T L LD +P + L+ K R ++ + G + SDG Q P + E L+++A + + NRF + D L +YL + LF Y A KP EL FE A +D +WF ++ ++I++ +L G++++ W+ D R + + E + E+P A+ A ++ S +L N+A + WL S+ AT + L A+ F A K K+E R S Y FY L+L + +S+ + + LQ L+ V E + P + + N CL A W + AK+ L L G + G W+ A L + ++ ++AI +++ V +WQ +L ALT + + E RM W + LEP+EQK GK G WSKGR +AL RL FD+LS D RIC I + ++ D Y Y K+I + +A+ +A+GHP++FW ++ L V++ P+L+V Q + L +++ P++ S+ ++ ++ N + + +S+QH ++A ILG +GL VP +AR+QV+ SI++IA +LTVQSDI GG +A V+ D+RLH+ +QP G GL++ +FV+PF GPL+ P GG V++EIDGK++++ RDF E++ ++ E + WLL+D E ALEAL L+ + VL WP+G+ + + + F++ +++WF+++G L++ + VL +Q+++ L+ S RFLK+ + + AL+ L ++L L D D RFHPLA+ A+ ++T M +S W Q ++L E +L ++PSTL +LRDYQ GF WM RLAHW AGACLADDMGLGKT+Q LA++L+RA +GP L++APTSVC NW+ E FAPTL ++FG GDR AM+ GP D+VV SYGL+ SE L +W+TL+ADEAQA+KN RSKAA AL A+F+++ TGTPIENHLGELW+LF INPGLLGT KF +++ +E+ D+ +QRLK L+ PFILRR K+ VL ELP RTE+ VE S EE+ YEALRR A+ + P G+Q+ ++LAEI +LRRACCHPRLV I SKL+ +V+EL+ N HKALVFSQFV HL LIR LDK+G++Y YLDGST V +R+ A++ FQAG GD+FLISLKAGG+GLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQ RPVTIYRL+ TIE+KI+ LH+ KR+LA+SLLEG EV+ + VEDM+ L++D Sbjct: 37 TLLKKALDLKPA-ITGLIEKSLREKLLKAGLILTPSDG--WQCHPEMCEYLMKRAVLQPWFTALATALLSENRFYYYADRDTL----FYLTKRLRLFLYQGNSKGFMDETRRIAALKP------QELPVLFESLFFANFDAEWFASINSSIRFCVLSGFVESNIWL-FNDTRKHYQLLE---EFFAAEKPV--ALAAAQSII---SERLLRGNLADADDWLTGDNSSVSLKLLATTRFLQNRNDDALLLFEAAHKALKKEVSKRNVSFTGLYGYFYSLALFRNRSVSSITLLKQNLQITLKTGGQGRFYLLNVILQEAVDIYQGKLPVESSVYLFKNNNYDYECLFHALLLYWLGEMETMTAAKKDFLPSLAGFCEQAHQLGFVWYATVSSALLQRLGYESHVCQKIAAQYADSPFIAILDLLPRVEKWQRALEALTQLTG----DATVNKAQPEVRMIWALSLVNNYIALEPKEQKLGKNGRWSKGRPIALKRLFHNLADFDYLSEYDRRICAHITLEKERDYY-YTKDIYEISSEAIWSAIGHPYIFWLNQEILDAPVQITTAEPQLLVKEQKKALHISIVPKIT--SQKIIAQKTADNGLLLYKISDQHRQVAEILGSNGLIVPAAARQQVIDSIASIASMLTVQSDI-GGTSSHAISVDVDSRLHIHLQPMGNGLQIEIFVQPFSAGGPLYKPAAGGATVLAEIDGKQLQTHRDFKLEKNYLKRVLNECSELYVDKDCKWLLDDAEFALEALLQLQALGDFAVLEWPKGKKIHISREAGLKQVQFSVRKEKDWFSIEGSLEIAEQEVLDMQRLMALLNGSSSRFLKLEDGQIIALTRELRQRLDDLVGLGDVQKDKVRFHPLAAQALDDITAGMRISASKPWQDQLKRLNEVGDLNPKIPSTLQGELRDYQREGFQWMTRLAHWGAGACLADDMGLGKTIQALALILSRAPNGPTLIIAPTSVCINWLEECQHFAPTLNAYQFGSGDRQAMLDNAGPFDLVVCSYGLLQSEGERLAEKRWHTLVADEAQAIKNALTKRSKAAMALQADFKLVTTGTPIENHLGELWNLFNFINPGLLGTLTKFNERYAQAIENNQDKVVQQRLKKLLRPFILRRLKNDVLKELPPRTELTLHVELSPEERTLYEALRRNAMQTMMEPTGQAGHQQLRVLAEIMKLRRACCHPRLVMEESTIASSKLEAFEELVDELLANRHKALVFSQFVGHLTLIRERLDKKGISYHYLDGSTPVPQRKLAMNAFQAGDGDLFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQKRPVTIYRLVAKDTIEDKIVELHKHKRDLANSLLEGGEVSGKMSVEDMMALIKD 1371
BLAST of helicase snf2 vs. nr
Match: gi|494098628|ref|WP_007039425.1| (ATP-dependent helicase [Thiorhodococcus drewsii] >gi|343922329|gb|EGV33031.1| SNF2-related protein [Thiorhodococcus drewsii AZ1]) HSP 1 Score: 930.243 bits (2403), Expect = 0.000e+0 Identity = 568/1361 (41.73%), Postives = 786/1361 (57.75%), Query Frame = 0 Query: 1 MITALGWLLDGQPTTLAALLNKHWRVRMEEGGALEVVSDGTQLQVDPVIGEVLVRQASPD-TFRGIYS-----IYQKRYNRFGHP--ILTDELMRNAYYLGETN------ALFHYACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTL---AWMGIVDLRPYLSSMAYCAEHASEERPAFRAMYAVSLVLTGASVQLESLNVASSSWLASA---AGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLLQLG---DKNSLARIAKLQKADDPYSDSPERLMVVDA-----AERLLFLHSGRPKRNIEGRENIGAISCLITASHSRWFDVEPTAKELEVLQG-----IRDDVEHYGLPWHVAQLDAALNKNSASND------SYLAIANIVEPVPEWQMSLNALTGMMAP---PEPTSHTQHVHSETRMAWFI---GEEFELEPREQKRGK-GGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYDKEIAMFNGQ-AMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPME-HGDQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQDQ 1313 ++ L W D + L+ + K R R+ + G L+ G L P + E+L R+ + TF I + + N + P +RNA Y G L ++P +Y ELV+ L + D W LP +++ +L + L A+ +D ++ A E A A+ A +L G Q S + S + A G++ F + A+G F + KR+ R + +FY L+LL+ G D +++ R A++ P ++D+ R+ F + R+++ +G + L + W P + L+ L G I+ V Y W A L AL++ S+ +A ++ P W+++L+AL G+ A E QH S+ RM W + G LEPREQKR K GGW++GR VAL RL RE FD+L+ D RI + R+ Y Y + + A+L AVGHP +F P + + +E+ P L VL ++ LLL + P + S L+ + G ++ + H I ILG DGL VP + +E+VL+ I+AIAPLLTV S IGG + AE E D + + P EGL + LF+ P G+ GP +PG G + +EIDG+ V++ RD E+ + + P+ G W LEDPE AL AL+ L + + L WP+G+ + L S +SM ++ QR+W LDGEL LDD VL++Q++L+LV++S GRF+++GE EF LS +L ++L++LA D DGRFHPLA+G I E M + ++ W ++L E R+LE LPSTL A+LRDYQ GF W+ RLAHW AGACLADDMGLGKT+Q LA++L+RA +GP LVLAP SVC+NWI+EA RFAPTL RFGDGDR M+ GP D++V SYGL+ +E L ++W T++ADEAQ KN RS+A L A FR+I TGTPIENHLGELW+LF+ INPGLLG+ + F ++F +P+E H D A+QRL+ L+ PFILRR KS+VLTELP RTEI +E + E A YEA+RR+A++ L E G +R ++LAEI RLRR CCHP+LV P ++ +KL I+++L+DN HKALVFSQFVDHL +IR LD +G++YQYLDGST KR+AAV FQAG+GD+FLISL+AGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ GTIEEKIL+LH KR+LAD LLEG + ++ML L++D Sbjct: 37 ILRRLAWR-DQKGQFLSMQVAKPLRERLLDAGVLDRARQG--LICAPSLVEILTRETVREGTFEKIREAGEAEVSSRPRNSWESPDTYRVTRRLRNALYGGNEPEVRRLLGLEGRGAERPVSYPEVQELVKI---CLRSPDADWLEGLPPSLR--ILAFAPKLLDEAYALALDPDFDALALGMLTPLAQEHVDAALAL-AERHLLCGELGQAGS--ILSDRVVPQALPLIGWLHFVQGRQDEALGVFDLYLSTLKRQTRKRNLHVRGLPGIFYLLALLRRGAPGDIDTVKRQAEIAARSQPPEIFGAVFRILDSLADVLGGRVRFQDTIWLTRDLQ---RLGPLDVLFQSLARHWLGECPREEALDALAGHCRAAIKAGVHWYA--WECADLMTALDRKPLSDGLLPRPAGLSTLAGLISPKSTWEIALDALKGLGAGGGNSEAKGDAQHA-SDRRMCWVLNRYGCRATLEPREQKRTKRGGWTQGRPVALQRLAESREEFDYLTEEDRRILSGMTKAREDGWYSYGRVYYSLDSDGALLGAVGHPRLFRPGVMDKPIELVAAGPALEVLERERDLLLRIAPFPPEGSNLLLQDEAG-QRLRLIQFDASHRRIGEILGSDGLAVPHAGKEKVLEGIAAIAPLLTVHSAIGG-TEHLAETQEADGLPRVHLNPLDEGLTLELFMHPLGDDGPRMAPGQGMATLFAEIDGRSVQTTRDLVGERRVAKRVRDACPILAGHSGWTWTLEDPEEALSALEQLHALGDAVALRWPEGKRIGLTSELSPSSMRVGVTKQRDWLGLDGELDLDDGRVLNMQQLLELVQESPGRFVRLGEREFMVLSDALRRRLENLAGLTDKDGRFHPLAAGVIDENLDGMSVKKNAHWQATLKRLAEVRDLEPSLPSTLQAELRDYQVEGFRWLARLAHWGAGACLADDMGLGKTLQALALVLSRATEGPTLVLAPMSVCSNWISEAHRFAPTLNPKRFGDGDREQMLESAGPFDLIVCSYGLVQTEGERLAGLRWATIVADEAQVFKNAMTKRSQAIMKLEAGFRLITTGTPIENHLGELWNLFRFINPGLLGSLETFNRRFATPIEQHQDSGARQRLRQLLRPFILRRLKSEVLTELPPRTEIAIELELGQAEAALYEAVRREAIERLETEEANPGQKRMQLLAEIMRLRRVCCHPKLVLPDSELSSAKLDAFGEILDDLLDNRHKALVFSQFVDHLSIIRAYLDARGISYQYLDGSTPENKRKAAVAAFQAGEGDLFLISLRAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQERPVTIYRLVTKGTIEEKILALHASKRDLADGLLEGTGDGGRLSYDEMLSLIRDH 1378
BLAST of helicase snf2 vs. nr
Match: gi|771611909|ref|WP_045222813.1| (ATP-dependent helicase [Desulfonatronum thioautotrophicum]) HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0 Identity = 541/1296 (41.74%), Postives = 773/1296 (59.65%), Query Frame = 0 Query: 60 DTFRGIYSIYQK-RYNRFGHPILTDEL-MRNAYYL---GETNALFHYACQKPYTYIWADELVECFERTLTAWDEKWFTTLPAAIQWQLLGYLQTLAWMGIVDLRPYLSSMAYCAEHASEERPAFRAMYAVSLVLTGA-SVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYM--LFYQLSLLQLGDKNSL------ARIAKLQKADDPYSDSPERLMVVDAAERLLFL----HSGRPKRNIEGRENI-GAISCLITASHSRWFDVEPTAKELEVLQGIRDDVEHYGLPWHVAQ----LDAALNKNSASND-------SYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFI---GEEFELEPREQK-RGKGGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGYD--KEIAMFNGQAMLAAVGHPWVFWPDELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEA--TGNQRFKILAEITRLRRACCHPRLV----SPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 + FR + I + Y + + ++ + +RNA ++ E L Q P+ + + + + E L + +W L I++Q L +VD R + C + R + A L+ G + E L ++ + +G++ F + A F +++ K+ GTR ++ P + +F L+LL+ G L A I + + +D + R + AE L S + + + R + G + L W +P EL L + E G W+ + L+A+ ++ S S+ +A + +P EW+++L AL + + T E R+ W + G++F LEPREQK + G W+ GR VAL +LR +++ +L+ D R+C I+ + YGY E +F QA+LAAVGHP +F D+ + VEV + P L VL + L + + P + + + V+ G ++V V + H+ IARILG G+ VP++A++QVL+SI+ +APLLTV S +GGGV + AE V D R L++ P G+GL M LF RP L PG GG + +E+DG++V + RD E+D + L+E P + W LEDPESAL+ L GL+ + +VL WP+GR + + M + +++WFA+DG L+LDD V+ + ++L L+ S GRF+++ E +F L+ L K+L++L + G+FHPLA+ A+ EL M S W +++ E+R+L ++P+TL A LRDYQ GF W++RLAHW AGACLADDMGLGKT+Q LA++L+RA+ GP LVLAPTSVC NW+ E +FAP+LR RFG G R MIS GP D+VV SYGL+ +ES LL+ V+W+TL+ADEAQA+KN A RS+AA +L A+F++I TGTPIEN+L ELW+LF INPGLLG+ +F + F +P+E D A++RLK L+ PFILRR KS+VL ELPSRTE+ VE S EE A Y+ALRR+AL+ +A PE+ G +R K+LAEI RLRRACCHP LV P + +KL+ I++EL++N H+ALVFSQFVDHL L+R+ LD++ V+YQYLDGST++ KRQ AV FQAG+GD+FLISLKAGG GLNLTAADYVIH+DPWWNPAVEDQASDRAHR+GQ RPVTIYRL+ GTIEEKIL LH+ KR+LA SLLEG + + VE+MLDL++D Sbjct: 95 EVFRAVERIVRTPSYTTYDMDVTSEWIELRNALFMHNEKEVLKLIVGPAQNPWVPVQSKRIDDLVEMCLLPLNTEWLERLSDEIKFQALAACLNKGLAFLVDTRDIWAFAQRCLPTMVQNHTGPRHVLATQLLSRGELELVWELLRDDQTATGLALSGWLHFLLGRYDAAERIFDESLAAVKK--GTRKRNIRIPGLPGIFQNLTLLRRGRPEDLRLVMHQASIIEKESREDVF-----RFVFYLLAEFASVLLGETKSDQFNQFLSSRSSFSGTYALLFVCLLKLWTGQKPNQAELTKLAELGAQAELVGYRWYAEETRRILEASKSRKVLSGSPSAKDVSSWKYLAFLFKPKEEWELALEALKNLGSGASSGGGTNATARELRLKWRLYNSGQQFGLEPREQKLKANGTWTAGRPVALKKLRNSPQNYPYLTEHDRRLCLAISEDTYSNYYGYSYKTEYNLFGDQALLAAVGHPLIFREDDAEQPVEVIQAEPCLQVLDEQNGLRIRIDPPLPAQGK-VAVQEEGRHRVRVVRFDDPHVTIARILGDGGVAVPVAAKKQVLESIAEVAPLLTVHSAVGGGVGQ-AEPVPADARPVLRVHPIGDGLGMELFFRPIPGGSLLARPGEGGKTLFAEVDGRQVCTTRDHQAERDAVDKLLESCPTLGANDDWSWRLEDPESALDTLLGLQEMGDAVVLEWPEGRQVRIAPESGVNRMVVGMRRKQDWFAMDGGLELDDGTVMEMSRLLSLLEHSPGRFVRLEEGDFLCLTRDLRKRLEALRSYGQG-GKFHPLAAPAMDELLDGMRVTSGKPWKGLLQRVSESRDLHPEVPATLRADLRDYQTQGFQWLVRLAHWGAGACLADDMGLGKTIQTLALILSRAKLGPTLVLAPTSVCINWMEETVKFAPSLRPLRFGPGQRDRMISEAGPFDLVVCSYGLLQNESELLSTVRWSTLVADEAQAIKNVVAKRSRAAMSLPADFKMITTGTPIENNLSELWNLFNFINPGLLGSMDRFNRNFATPIEQNRDTEARRRLKNLIRPFILRRLKSEVLAELPSRTEVVLPVELSPEEAAIYDALRRKALEKIAEPEDGDQPGQRRIKVLAEIMRLRRACCHPELVMPGNGPKLGPGSAKLQAFGEILDELLENRHQALVFSQFVDHLHLVRSYLDQRKVSYQYLDGSTSIAKRQEAVTAFQAGEGDLFLISLKAGGFGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVTRGTIEEKILDLHRHKRDLATSLLEGTDSGIKLSVEEMLDLIKD 1380
BLAST of helicase snf2 vs. nr
Match: gi|1170132273|ref|WP_080522915.1| (ATP-dependent helicase [Methyloprofundus sedimenti] >gi|1169185895|gb|OQK18309.1| hypothetical protein AU255_10950 [Methyloprofundus sedimenti]) HSP 1 Score: 923.694 bits (2386), Expect = 0.000e+0 Identity = 464/957 (48.48%), Postives = 657/957 (68.65%), Query Frame = 0 Query: 370 NDSYLAIANIVEPVPEWQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFI---GEEFELEPREQKRGK-GGWSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGY-DKEIAMFNGQAMLAAVGHPWVFWP--DELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEELVLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQSLADFADDDG---RFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRR---QALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 N + + I ++V PV +W+ +L AL+ + + T +HSE+R+ W + G LEPREQK GK G W+KGR +AL RL E+++FDFLS D++IC+ I + + + YGY E GQ +++A+GHP+V+W D+ V + + P+L+V ++ L ++L P + + E +V R NQV V ++EQH ++A ILG GL VP A++QV+ SI++IA +LT+QSDI G V +N E VE D+RLH+ +Q G+GL++ +FV+PF + GP++ P VGG V++EI GK++++ RDF+ E L + P S WLL+DPE ALEAL ++ E+ +V+ WP+G+ +++ F++ +++WF+++GE+++DD+ V +Q+++ L++ + GRFLK+ + +F +L+ L ++L +A + G FH LA+ A+ + + M ++ +W Q EKL+ +LE +LPSTL +LRDYQ G+ WM RLAHW AGACLADDMGLGKT+Q L+++L+RA GP L+LAPTSVC NW+ EA FAPTL + +FG G+R +I+ DV+V SYGL+ +E+ LL QWN ++ADEAQA+KN RS+AA AL +F++I TGTPIENHLGELW+LF INPGLLGT KKF +++ +E+ D +QRLK L+ PFILRR K+ VL ELP++TEI VE S+EE+ FYEA+RR QA+ + G Q K+LAEI +LRRACCHP+LV I +KL+ +V+EL+ N HKAL+FSQFV HL +I+ LDK+G++YQYLDGST V KR+ AV+ FQAG+GD+FLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQ RPVTIYRL+ TIE+KI+ LH KR+LA SLLEG EV+ + V +M+ L+++ Sbjct: 431 NAACIHIVDLVPPVEKWERALQALSHLNELSTDGADT--IHSESRLVWLLTLDGNYATLEPREQKMGKLGRWTKGRPIALKRLHYEQDTFDFLSDQDKQICNQIEVEYESNYYGYGHSEFFSVTGQGVISAIGHPYVYWANADKFDTPVAINKAEPQLLVTSKASNLHISLHPAINN--EQTLVARTADNQVLVYQINEQHRQVAGILGAKGLSVPHKAKQQVIDSIASIASMLTIQSDIEG-VAKNVESVEVDSRLHMHLQRVGDGLQIEVFVQPFADAGPIYKPAVGGTTVLAEIAGKQMQTTRDFAIETGYLEQLQMQCPELYQSKDARWLLDDPEMALEALLQIQAIEDFVVMEWPKGQKINVSREAGLNQAHFSVRKEKDWFSVEGEVQIDDEQVYDMQRLINLLQATSGRFLKLEDGQFISLTNELRQRLDDVAGLGEQKGNKLHFHALAAPALNDAMEGMDVKADKKWLEQLEKLESMADLEPELPSTLQGELRDYQLEGYQWMARLAHWGAGACLADDMGLGKTIQALSLILSRATLGPTLILAPTSVCMNWLEEAQHFAPTLNVQQFGVGNRQKIIADAAEFDVIVCSYGLLQTEADLLINKQWNIIVADEAQAIKNGLTKRSQAAMALQGDFKLITTGTPIENHLGELWNLFHFINPGLLGTLKKFNERYAQAIENNKDHSTQQRLKKLLRPFILRRLKNDVLKELPAKTEITIHVELSKEERIFYEAMRRNAVQAMQAAQEEGQQAGQQHLKVLAEIMKLRRACCHPKLVMQDSPISSAKLQAFEELVDELISNRHKALIFSQFVGHLSIIKELLDKKGIHYQYLDGSTPVVKRKKAVNAFQAGEGDVFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQKRPVTIYRLLAKDTIEDKIVDLHAHKRDLASSLLEGGEVSGKMSVNEMMALIRE 1382
BLAST of helicase snf2 vs. nr
Match: gi|1212743371|ref|WP_088617960.1| (ATP-dependent helicase [Methylovulum psychrotolerans] >gi|1211199292|gb|ASF45077.1| helicase [Methylovulum psychrotolerans]) HSP 1 Score: 922.539 bits (2383), Expect = 0.000e+0 Identity = 526/1242 (42.35%), Postives = 746/1242 (60.06%), Query Frame = 0 Query: 126 WDEKWFTTLPAAIQWQLLGYLQTLAWMGIV-DLRPYLSSMAYCAEHASEERPAFRAMYAVSL---VLTG----ASVQLESLNVASSSWLASAAGFIAFATDKPLPAIGYFTQAIKLRKREFGTRLESLDDPYMLFYQLSLL--QLGDKNSLARIAKLQKADDPYSDSPERLMVVDAAERLLFLHSGRPKRNIEGRENIGAI-SCLITASHS-----RWF------------DVEPTAKELEVLQGIRD---DVEHYGLPWHVA---------QLDAALNKNSASNDSYLAIANIVEPVPE---WQMSLNALTGMMAPPEPTSHTQHVHSETRMAWFI---GEEFELEPREQKRGKGG-WSKGRKVALMRLRTERESFDFLSPADERICDCINIVRQHDRYGY-DKEIAMFNGQAMLAAVGHPWVFWP--DELRETVEVRETAPELVVLAQDEQLLLTLTPRVADLSESLVVERRGFNQVDVTPLSEQHLEIARILGPDGLRVPLSAREQVLQSISAIAPLLTVQSDIGGGVDENAEFVECDTRLHLQIQPAGEGLRMGLFVRPFGEQGPLFSPGVGGLNVISEIDGKRVRSERDFSREQDQQNALVEEIPVFQLSPGTDWLLEDPESALEALDGLRNYEEEL-VLSWPQGRSLSLLGHHSATSMAFNISSQREWFALDGELKLDDDNVLSLQKVLQLVRQSDGRFLKIGETEFFALSASLHKKLQ---SLADFADDDGRFHPLASGAIAELTQDMLGESSSEWNLQQEKLQEARELELQLPSTLGAQLRDYQFAGFDWMMRLAHWEAGACLADDMGLGKTVQILAVLLARAEDGPALVLAPTSVCTNWINEAARFAPTLRMHRFGDGDRTAMISGLGPRDVVVSSYGLMHSESTLLTPVQWNTLIADEAQALKNPRALRSKAAAALNANFRVIATGTPIENHLGELWSLFQIINPGLLGTQKKFEQQFISPMEHG-DQYAKQRLKALVAPFILRRHKSQVLTELPSRTEINRVVEASEEEKAFYEALRRQALDDLAAPEEATGNQRFKILAEITRLRRACCHPRLVSPAVDIEGSKLKELMNIVEELVDNGHKALVFSQFVDHLKLIRTALDKQGVNYQYLDGSTTVKKRQAAVDDFQAGKGDIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLIMAGTIEEKILSLHQQKRELADSLLEGREVAASVDVEDMLDLLQD 1312 +D WFT+LP +Q+ L YL + D +PYL + +P + + + +L G A + LE + + + A F D+ AI F A++ K+E R ++ Y F+ L+LL Q GD +A L+K P M+ A +L + I+ + I SC H+ R F + A + ++ G+ ++ G W+ A Q A + A+ + A I++ +P+ W+ +L ALT + P ++ T E RM W + G E L P+EQ+ K G WSKGR VAL +L + +++LS D +IC I I ++ D YGY K++ + +LAA GHP V+W ++ + V++ T P+L+V + + L ++L P ++ + ++ ++ + + + ++ QHL++A ILG +GL VP SAR+QV+ SI++IA +LTVQSDIGG +A V D+RLH+ +QP G+G+++ +F++PF GPL+ P GG V+++IDG++ ++ RDF E L + P WLL+DPE ALE L L+ E+ VL WP+G+ + L + F+I ++ WF++DG+L +D+D V ++Q+++ L+ S+ RFLK+ + + AL+ L ++L L + DD RFH LA+ A+ +T+ M +S W Q + L +L Q+PSTL +LRDYQ GF WM RLAHW AGACLADDMGLGKTVQ LA++L+RA +GP L+LAPTSVC NW+ EA RFAPTL + FG GDR AM+ D++V SYGL+ +E+ L V+W TL+ADEAQA+KN RSKAA +L A F++I TGTPIENHLGELW+LF INPGLLG+ +F +++ +E+ D +QRLK L+ PFILRR K+ VLTELP RTE+ +E S EE+A YEALRR A+D +A+ +E GNQ+ K+LAEI +LRRACC+PRLV I SKL+ +V+EL+DN HKALVFSQFV HL LIR LDK+G+ Y YLDGST V +R+ A++ FQAG GD+FLISLKAGG+GLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQ RPVTIYRL+ TIE+KI+ LH+ KR+LA+SLLEG EV+ + VEDM+ L+ D Sbjct: 161 FDADWFTSLPVQMQYGALKYLVANNYTEFTADKKPYL----LLEQLFGNTKPGYPEIAHTVIEQRLLRGNFQDAQLWLEGDATSEGLKILATARFFQNRNDE---AISLFNAALRQLKKETNKRNITITGLYGCFFALALLRSQTGDN-----VAYLKKQHLP--------MLAKAGYDPFYLAHSLLDQAIDVYQAKAPIESCHQLLKHTTFPYERLFQALILYWLVDSDSIANNAPMVAIMAGLAKLCQQAQNAGFVWYAAVSSLLLQRVQYKDADCRQIAAFYAGSPFAEIIDLLPKVSLWERALTALTQLSGQPAASAQTSQ---ELRMVWSLSLEGNEVFLVPKEQRLSKNGQWSKGRPVALKKLYHDLADYEYLSEQDRKICTKIVIDKESDYYGYYAKDVYELSVDGLLAAAGHPNVYWAGQEQTGKPVDISITEPQLLVKEEGDNLRISLLPEIS--GQRIIAQKTANHGLIIYVINNQHLQVAEILGKNGLVVPASARQQVIDSIASIASMLTVQSDIGG-TSSHAIDVAADSRLHIHLQPVGQGIQIDVFIQPFLSGGPLYKPASGGTTVLADIDGQQYQTTRDFKDENAHVAKLFADCPRLFKDKELKWLLDDPEMALEVLLDLQALSEDFAVLEWPKGKKIRLSREAGLSQAQFSIRKEQNWFSVDGDLVVDNDQVFNMQRLMHLLSGSNSRFLKLEDGQIIALTRELRQRLDDLTGLGEVQDDKIRFHALAAPALDGITEGMAITASKPWKDQLKHLNAISDLNPQVPSTLQGELRDYQREGFQWMSRLAHWGAGACLADDMGLGKTVQALALILSRAPEGPTLILAPTSVCINWLEEAQRFAPTLNVQHFGHGDRQAMLDNAAEFDLIVCSYGLLQTEAERLGQVRWQTLVADEAQAIKNALTKRSKAAMSLQAEFKLITTGTPIENHLGELWNLFNFINPGLLGSLSRFNERYAHAIENQQDHVVQQRLKKLLRPFILRRLKNDVLTELPPRTEVTLHIELSTEERAMYEALRRNAMDAIASAKEQPGNQQLKVLAEIMKLRRACCNPRLVMEDSHIGSSKLQAFEELVDELLDNRHKALVFSQFVGHLDLIRELLDKKGITYHYLDGSTPVPQRKKAMNAFQAGDGDLFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQKRPVTIYRLVAKDTIEDKIVDLHKHKRDLANSLLEGGEVSGKMSVEDMMALISD 1376 The following BLAST results are available for this feature:
BLAST of helicase snf2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 21
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BLAST of helicase snf2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of helicase snf2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2_size2283618:717001..720945+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2_size2283618-processed-gene-7.8 ID=snap_masked-scaffold2_size2283618-processed-gene-7.8|Name=helicase snf2|organism=Tigriopus kingsejongensis|type=gene|length=3945bp|location=Sequence derived from alignment at scaffold2_size2283618:717001..720945+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'helicase snf2' has the following synonyms
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