l237Cc, snap_masked-scaffold336_size202805-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of l237Cc vs. L. salmonis genes
Match: EMLSAG00000007686 (supercontig:LSalAtl2s:LSalAtl2s447:426260:427822:1 gene:EMLSAG00000007686 transcript:EMLSAT00000007686 description:"maker-LSalAtl2s447-snap-gene-4.45") HSP 1 Score: 389.423 bits (999), Expect = 1.313e-138 Identity = 192/272 (70.59%), Postives = 223/272 (81.99%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAAQLFNR+ Q+GVG+A+AGGV SAL+NV+GG RAVIFDRFSGIK+ V+GEGTHFMIPWVQ PIIFDIR+RPKNVP+ITGSKDLQNVNITLR+LFRP+P+ALP IY+++G+DY+DR+LPSITNEVLK + + + TQ DISITH TFGREFT AVELKQVAQQDAEKARFLVE AEQ KKA+II+AEGDTEAADLL+KAF KAGEGLVELRRIETAE+IS Q++ +RNV+YLP GQ TLL+LPQ Sbjct: 1 MAAQLFNRIXQIGVGMALAGGVVNSALFNVEGGQRAVIFDRFSGIKETVVGEGTHFMIPWVQSPIIFDIRARPKNVPTITGSKDLQNVNITLRILFRPRPEALPKIYSSIGVDYDDRILPSITNEVLKKRIRL-RSRQRRTQH-----------------------DISITHLTFGREFTQAVELKQVAQQDAEKARFLVEKAEQIKKASIIAAEGDTEAADLLSKAFIKAGEGLVELRRIETAEDISAQLSASRNVIYLPNGQSTLLNLPQ 248
BLAST of l237Cc vs. L. salmonis genes
Match: EMLSAG00000010095 (supercontig:LSalAtl2s:LSalAtl2s6658:850:3163:1 gene:EMLSAG00000010095 transcript:EMLSAT00000010095 description:"maker-LSalAtl2s6658-augustus-gene-0.2") HSP 1 Score: 226.098 bits (575), Expect = 3.361e-74 Identity = 117/234 (50.00%), Postives = 167/234 (71.37%), Query Frame = 0 Query: 27 LYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYL 260 +Y V+GGHRA++F R GI+ ++ EG HF IPW Q PII+ IRSRP+ + S TGSKDLQ VNI+LRVL RP ++P I+ LG D++++VLPSI NEVLK VVA+F+A +LITQR+QVS I ++LT RA+ F +IL +IT +FGRE+ AVE KQ AQQ+A++A F+V+ A+Q ++ I+ AEG+ AA +L A K G ++LR++ + I+ ++ ++N VYL Sbjct: 1 MYTVEGGHRAIMFSRIGGIQDTIMTEGLHFRIPWFQYPIIYXIRSRPRKITSPTGSKDLQMVNISLRVLSRPXSMSIPTIHRELGRDFDEKVLPSICNEVLKGVVAKFNASQLITQRQQVSXLIRKQLTDRARDFNIILXXXAITELSFGREYAAAVESKQXAQQEAQRAAFVVDKAKQERQQKIVQAEGEALAAAMLGDAISK-NPGYLKLRKLRASTNIAKTVSQSQNRVYL 233
BLAST of l237Cc vs. L. salmonis genes
Match: EMLSAG00000009543 (supercontig:LSalAtl2s:LSalAtl2s614:148035:148595:-1 gene:EMLSAG00000009543 transcript:EMLSAT00000009543 description:"augustus_masked-LSalAtl2s614-processed-gene-1.3") HSP 1 Score: 76.2554 bits (186), Expect = 1.580e-17 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0 Query: 26 ALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDR--VLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKK 208 +L + D G RA IFD F IK+ ++GE THFMIP S+ Q++ +DY+ + +LP + + + +F +++ VS RI+ EL +A QFG++LDD+SIT T REFT AV LK QD E+ F +E EQ KK Sbjct: 7 SLQSEDEGQRAFIFDHFGRIKETIVGEVTHFMIP----------------------SRFFQDLQ-------------------CYWVDYDVKSFLLPQRSPQ--GSCCGRFQPH---YKKKFVSTRINEELNIKASQFGILLDDMSITPLTLSREFTXAVVLK----QDKEETIFRLEKVEQIKK 141
BLAST of l237Cc vs. L. salmonis genes
Match: EMLSAG00000000777 (supercontig:LSalAtl2s:LSalAtl2s1125:65221:65806:1 gene:EMLSAG00000000777 transcript:EMLSAT00000000777 description:"snap_masked-LSalAtl2s1125-processed-gene-0.0") HSP 1 Score: 51.2174 bits (121), Expect = 4.424e-9 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 201 EMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISG 249 + EQ KKA II+ E +TEAAD ++K+F + EGLV+++ I+TAEEIS Sbjct: 27 QFDEQIKKAYIIALENETEAADWMSKSFIQVCEGLVKVKLIKTAEEISA 75
BLAST of l237Cc vs. SwissProt
Match: gi|73920219|sp|P24156.2|L2CC_DROME (RecName: Full=Protein l(2)37Cc) HSP 1 Score: 431.409 bits (1108), Expect = 2.319e-153 Identity = 206/271 (76.01%), Postives = 239/271 (88.19%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLP 271 MAAQ FNR+GQ+G+GVA+ GGV SALYNV+GGHRAVIFDRF+GIK++V+GEGTHF IPWVQ+PIIFDIRS+P+NVP ITGSKDLQNVNITLR+L+RP PD LP IYT LG DY++RVLPSI EVLKAVVAQFDAGELITQRE VS R+ +ELT RA+QFG ILDDIS+TH TFGREFT AVE+KQVAQQ+AEKARF+VE AEQ K A+IISAEGD EAA LLAK+FG+AG+GLVELRRIE AE+I+ Q++ +R V YLP GQ TLL+LP Sbjct: 1 MAAQFFNRIGQMGLGVAVLGGVVNSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQLSRSRGVAYLPSGQSTLLNLP 271
BLAST of l237Cc vs. SwissProt
Match: gi|88909244|sp|P84173.1|PHB_CHICK (RecName: Full=Prohibitin) HSP 1 Score: 399.823 bits (1026), Expect = 6.130e-141 Identity = 183/272 (67.28%), Postives = 231/272 (84.93%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAA++F +G+ G+G+A+AGGV SALYNVD GHRAVIFDRF G++ V+GEGTHF+IPWVQKPIIFD RSRP+N+P ITGSKDLQNVNITLR+LFRP LP I+T++G DY++RVLPSIT E+LK+VVA+FDAGELITQRE VS ++ +LT RA FGLILDD+S+TH TFG+EFT AVE+KQVAQQ+AE+ARF+VE AEQ KKAA+ISAEGD++AA+L+A + AG+GL+ELR++E AE+I+ Q++ +RN+ YLP GQ LL LPQ Sbjct: 1 MAAKVFESIGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ 272
BLAST of l237Cc vs. SwissProt
Match: gi|54038835|sp|P67779.1|PHB_RAT (RecName: Full=Prohibitin >gi|54038837|sp|P67778.1|PHB_MOUSE RecName: Full=Prohibitin; AltName: Full=B-cell receptor-associated protein 32; Short=BAP 32) HSP 1 Score: 397.897 bits (1021), Expect = 4.549e-140 Identity = 185/272 (68.01%), Postives = 229/272 (84.19%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAA++F +G+ G+ +A+AGGV SALYNVD GHRAVIFDRF G++ V+GEGTHF+IPWVQKPIIFD RSRP+NVP ITGSKDLQNVNITLR+LFRP LP IYT++G DY++RVLPSIT E+LK+VVA+FDAGELITQRE VS ++ +LT RA FGLILDD+S+TH TFG+EFT AVE KQVAQQ+AE+ARF+VE AEQ KKAAIISAEGD++AA+L+A + AG+GL+ELR++E AE+I+ Q++ +RN+ YLP GQ LL LPQ Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ 272
BLAST of l237Cc vs. SwissProt
Match: gi|464371|sp|P35232.1|PHB_HUMAN (RecName: Full=Prohibitin >gi|88909243|sp|Q3T165.1|PHB_BOVIN RecName: Full=Prohibitin) HSP 1 Score: 395.971 bits (1016), Expect = 2.300e-139 Identity = 184/272 (67.65%), Postives = 229/272 (84.19%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAA++F +G+ G+ +A+AGGV SALYNVD GHRAVIFDRF G++ V+GEGTHF+IPWVQKPIIFD RSRP+NVP ITGSKDLQNVNITLR+LFRP LP I+T++G DY++RVLPSIT E+LK+VVA+FDAGELITQRE VS ++ +LT RA FGLILDD+S+TH TFG+EFT AVE KQVAQQ+AE+ARF+VE AEQ KKAAIISAEGD++AA+L+A + AG+GL+ELR++E AE+I+ Q++ +RN+ YLP GQ LL LPQ Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ 272
BLAST of l237Cc vs. SwissProt
Match: gi|55976579|sp|Q9BKU4.1|PHB1_CAEEL (RecName: Full=Mitochondrial prohibitin complex protein 1; Short=Prohibitin-1) HSP 1 Score: 385.571 bits (989), Expect = 3.873e-135 Identity = 195/269 (72.49%), Postives = 226/269 (84.01%), Query Frame = 0 Query: 2 AAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSL 270 A +L RLG +GVG++IAGG+AQ+ALYNVDGG RAVIFDRFSG+K +V+GEGTHF+IPWVQKPIIFDIRS P+ V +ITGSKDLQNVNITLR+L RP PD LPNIY +G+DY +RVLPSITNEVLKAVVAQFDA E+ITQRE VS R L RA QFGL+LDDI+ITH FGREFT AVE+KQVAQQ+AEKAR+LVE AEQ K AA+ +AEGD +AA LLAKAF AG+GLVELR+IE AEEI+ +MA +NV YLP QQTLL+L Sbjct: 5 AQKLLGRLGTVGVGLSIAGGIAQTALYNVDGGQRAVIFDRFSGVKNEVVGEGTHFLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVALRERAAQFGLLLDDIAITHLNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIAAVTTAEGDAQAAKLLAKAFASAGDGLVELRKIEAAEEIAERMAKNKNVTYLPGNQQTLLNL 273
BLAST of l237Cc vs. SwissProt
Match: gi|74625389|sp|Q9P7H3.1|PHB1_SCHPO (RecName: Full=Prohibitin-1) HSP 1 Score: 317.005 bits (811), Expect = 4.395e-108 Identity = 148/262 (56.49%), Postives = 205/262 (78.24%), Query Frame = 0 Query: 3 AQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAG-ARNVVYLPQG 263 A + R+ + + + I + QS++Y+V GG RAV+FDR SG++K V+ EGTHF+IPW+QK I++D+R+RP+N+ + TGSKDLQ V++TLRVL RP+ LP IY LG+DY++RVLPSI NE+LK+VVAQFDA ELITQRE VSA+I +EL RA +FG+ L+D+SITH TFG+EFT AVE KQ+AQQ+AE+ARFLVE +EQ ++A +I AEG+ EAAD+++KA KAG L+++RR+ET++E++ +A V YLP G Sbjct: 2 AVVLERVARYAIPIGIGFTLLQSSIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQERQANVIRAEGEAEAADIVSKALDKAGGALIQIRRLETSKEVATALANKGAQVTYLPFG 263
BLAST of l237Cc vs. SwissProt
Match: gi|1730544|sp|P40961.2|PHB1_YEAST (RecName: Full=Prohibitin-1) HSP 1 Score: 315.849 bits (808), Expect = 1.552e-107 Identity = 143/260 (55.00%), Postives = 207/260 (79.62%), Query Frame = 0 Query: 2 AAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLP 261 +A+L + + ++ + + I Q ++Y+V GG R VIFDR +G+K+ V+GEGTHF++PW+QK II+D+R++PK++ + TG+KDLQ V++TLRVL RP+ LP IY LG+DY++RVLPSI NEVLK++VAQFDA ELITQRE +S +I +EL+TRA +FG+ L+D+SITH TFG EFT AVE KQ+AQQDAE+A+FLVE AEQ ++A++I AEG+ E+A+ ++KA K G+GL+ +RR+E +++I+ +A + NVVYLP Sbjct: 4 SAKLIDVITKVALPIGIIASGIQYSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAKVGDGLLLIRRLEASKDIAQTLANSSNVVYLP 263
BLAST of l237Cc vs. SwissProt
Match: gi|74851946|sp|Q54GI9.1|PHB1_DICDI (RecName: Full=Prohibitin-1, mitochondrial; Flags: Precursor) HSP 1 Score: 310.842 bits (795), Expect = 9.278e-106 Identity = 144/266 (54.14%), Postives = 201/266 (75.56%), Query Frame = 0 Query: 5 LFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSL 270 N+L L + V +AQS++Y VDGG RAVIFDR SG+K+ +GEGTHF++PW+QKPIIFDIRS P+N+ S TGSKDLQ V++T+RVLFRP + LP+I++ LG+DY++R+LPS+ NEVLK+VVAQ+DA ELITQRE VS I L RA++F L+LDD+SITH +F ++FT+A+E KQVAQQ+AE+++++V EQ KKA II AEG+ EAA L+ +A G + +ELRRIE ++I+ ++ ++ V Y+P L++L Sbjct: 4 FLNKLIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIGQAMGNSA-AFIELRRIEAYKDITESLSKSKQVTYVPTSGNLLMNL 268
BLAST of l237Cc vs. SwissProt
Match: gi|75096997|sp|O04331.1|PHB3_ARATH (RecName: Full=Prohibitin-3, mitochondrial; Short=Atphb3; AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 3) HSP 1 Score: 304.679 bits (779), Expect = 3.330e-103 Identity = 144/269 (53.53%), Postives = 199/269 (73.98%), Query Frame = 0 Query: 2 AAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSL 270 A + L + G+ A V ++L+ VDGG RAVIFDRF G+ +GEGTHF+IP +Q+P IFDIR++P SI+G+KDLQ VN+TLRVL RP+ LP I+ TLG++Y+++VLPSI NEVLKAVVAQF+A +L+T+R VSA + L TRA+ F ++LDD++ITH ++G EF+ AVE KQVAQQ+AE+++F+V A+Q ++AA+I AEG++EAA L++ A KAG GL+ELRRIE + EI+ +A + NV YLP GQ L +L Sbjct: 7 AVSFLSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSYGVEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLIELRRIEASREIASTLARSPNVAYLPGGQSMLFAL 275
BLAST of l237Cc vs. SwissProt
Match: gi|75273705|sp|Q9LK25.1|PHB4_ARATH (RecName: Full=Prohibitin-4, mitochondrial; Short=Atphb4) HSP 1 Score: 300.827 bits (769), Expect = 1.029e-101 Identity = 142/270 (52.59%), Postives = 198/270 (73.33%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSL 270 +A L + G+ +A S+LY VDGG RAV+FDRF G+ +GEGTHF+IP++Q P I+DIR++P S +G+KDLQ VN+TLRVLFRP+ LP I+ TLG++Y+++VLPSI NEVLKAVVA F+A +L+T+R QVSA + L RA++F + LDDI+ITH ++G EF+ AVE KQVAQQ+AE+++F+V A+Q ++AA+I AEG++EAA L++ A KAG GL+ELRRIE + E++ +A + NV YLP GQ L +L Sbjct: 6 VAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLIELRRIEASREVAATLARSPNVAYLPGGQSMLFNL 275
BLAST of l237Cc vs. nr
Match: gi|749798785|ref|XP_011152909.1| (PREDICTED: protein l(2)37Cc [Harpegnathos saltator] >gi|749798787|ref|XP_011152910.1| PREDICTED: protein l(2)37Cc [Harpegnathos saltator] >gi|1126604191|ref|XP_019700684.1| PREDICTED: protein l(2)37Cc [Harpegnathos saltator] >gi|307192234|gb|EFN75536.1| Protein l(2)37Cc [Harpegnathos saltator]) HSP 1 Score: 440.269 bits (1131), Expect = 2.601e-154 Identity = 211/272 (77.57%), Postives = 238/272 (87.50%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAAQ FNR+GQLG+GVA+AGGV SALYNVDGGHRAVIFDRF+GIK V+GEGTHF IPWVQKPI+FDIRSRP+NVP ITGSKDLQNVNITLR+LFRP PD+LP IYT LG+DY++RVLPSIT EVLKAVVAQFDAGELITQRE VS ++ ELT RA QFGLILDDIS+TH TFG+EFT AVELKQVAQQ+AEKARFLVE AEQ KKAAIISAEGD +AA LLAK+ +AG+GLVELRRIE AE+I+ ++ +R V YLP GQ LL+LPQ Sbjct: 1 MAAQFFNRIGQLGLGVALAGGVINSALYNVDGGHRAVIFDRFAGIKNVVVGEGTHFFIPWVQKPILFDIRSRPRNVPVITGSKDLQNVNITLRILFRPVPDSLPKIYTILGVDYDERVLPSITTEVLKAVVAQFDAGELITQREVVSQKVSEELTDRASQFGLILDDISLTHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAIISAEGDAQAASLLAKSLAEAGDGLVELRRIEAAEDIAHNLSKSRQVAYLPPGQNVLLNLPQ 272
BLAST of l237Cc vs. nr
Match: gi|861649181|gb|KMQ96698.1| (protein l 37cc [Lasius niger]) HSP 1 Score: 439.499 bits (1129), Expect = 4.911e-154 Identity = 211/272 (77.57%), Postives = 237/272 (87.13%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAAQ FNRLGQLG+G+A+AGGV SALYNVDGGHRAVIFDRF+GIK V+GEGTHF+IPWVQKPIIFDIRSRP+NVP ITGSKDLQNVNITLR+LFRP PD+LP IYT LG+DY++RVLPSIT EVLKAVVAQFDA ELITQRE VS ++ +LT RA QFGLILDDISITH TFG+EFT AVELKQVAQQDAEKARFLVE AEQ KKA+IISAEGD +AA LLAK+ +AG+GLVELRRIE AE+I+ M+ +R V YLP G LL+LPQ Sbjct: 1 MAAQFFNRLGQLGLGIALAGGVVNSALYNVDGGHRAVIFDRFAGIKNIVVGEGTHFIIPWVQKPIIFDIRSRPRNVPVITGSKDLQNVNITLRILFRPVPDSLPKIYTILGVDYDERVLPSITTEVLKAVVAQFDASELITQREIVSQKVSDDLTDRASQFGLILDDISITHLTFGKEFTQAVELKQVAQQDAEKARFLVEKAEQQKKASIISAEGDAQAASLLAKSLAEAGDGLVELRRIEAAEDIAYNMSKSRQVAYLPSGLNVLLNLPQ 272
BLAST of l237Cc vs. nr
Match: gi|1130230126|ref|XP_019760167.1| (PREDICTED: protein l(2)37Cc [Dendroctonus ponderosae] >gi|332376699|gb|AEE63489.1| unknown [Dendroctonus ponderosae] >gi|478256840|gb|ENN77015.1| hypothetical protein YQE_06509, partial [Dendroctonus ponderosae]) HSP 1 Score: 439.499 bits (1129), Expect = 5.733e-154 Identity = 210/270 (77.78%), Postives = 238/270 (88.15%), Query Frame = 0 Query: 2 AAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLP 271 AAQ+FNR+GQ+G+GVA+AGGV SALYNVDGGHRAVIFDRF+GIKK VIGEGTHF +PWVQ+PIIFD+RSRP+NVP +TGSKDLQNVNITLR+LFRP PD LP IYT LG DYE+RVLPSIT EVLKAVVAQFDAGELITQR+ VS ++ +LT RA QFG+ILDDISITH TFGREFT AVELKQVAQQDAEKARFLVE AEQTKKA +ISAEGD +AA LLAKAFG AGEGLVELRRIE AE+I+ Q++ +R V YLP GQ L+++P Sbjct: 3 AAQIFNRIGQVGLGVALAGGVVNSALYNVDGGHRAVIFDRFAGIKKQVIGEGTHFFVPWVQRPIIFDVRSRPRNVPVVTGSKDLQNVNITLRILFRPVPDQLPKIYTVLGQDYEERVLPSITTEVLKAVVAQFDAGELITQRDLVSQKVSEDLTERASQFGVILDDISITHLTFGREFTQAVELKQVAQQDAEKARFLVEKAEQTKKATVISAEGDAQAAILLAKAFGDAGEGLVELRRIEAAEDIAYQLSRSRQVAYLPSGQNLLMNVP 272
BLAST of l237Cc vs. nr
Match: gi|1070593717|ref|XP_018393922.1| (PREDICTED: protein l(2)37Cc [Cyphomyrmex costatus]) HSP 1 Score: 439.113 bits (1128), Expect = 7.448e-154 Identity = 209/272 (76.84%), Postives = 237/272 (87.13%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAAQ FNRLGQLG+G+A+AGGV SALYNVDGGHRAVIFDRF+GIK VIGEGTHF IPWVQKPIIFDIRSRP+NVP ITGSKDLQNVNITLR+LFRP PD+LP IYT LG+DY++RVLPSIT EVLKAVVAQFDAGELITQRE VS ++ +LT RA QFG+ILDDIS+TH TFG+EFT AVELKQVAQQDAEKARFLVE AEQ KKAA+ISAEGD +AA LLAK+ +AGEGLVELR+IE AE+I+ ++ +R V YLP G LL++PQ Sbjct: 1 MAAQFFNRLGQLGLGIALAGGVVNSALYNVDGGHRAVIFDRFAGIKNTVIGEGTHFFIPWVQKPIIFDIRSRPRNVPVITGSKDLQNVNITLRILFRPVPDSLPKIYTILGVDYDERVLPSITTEVLKAVVAQFDAGELITQREIVSQKVSEDLTERAAQFGIILDDISLTHLTFGKEFTQAVELKQVAQQDAEKARFLVEKAEQQKKAAVISAEGDAQAASLLAKSLAEAGEGLVELRKIEAAEDIAHNLSKSRQVAYLPTGLNMLLNMPQ 272
BLAST of l237Cc vs. nr
Match: gi|951573157|ref|XP_014484638.1| (PREDICTED: protein l(2)37Cc [Dinoponera quadriceps]) HSP 1 Score: 438.728 bits (1127), Expect = 7.613e-154 Identity = 211/272 (77.57%), Postives = 237/272 (87.13%), Query Frame = 0 Query: 1 MAAQLFNRLGQLGVGVAIAGGVAQSALYNVDGGHRAVIFDRFSGIKKDVIGEGTHFMIPWVQKPIIFDIRSRPKNVPSITGSKDLQNVNITLRVLFRPQPDALPNIYTTLGIDYEDRVLPSITNEVLKAVVAQFDAGELITQREQVSARIDRELTTRAQQFGLILDDISITHCTFGREFTHAVELKQVAQQDAEKARFLVEMAEQTKKAAIISAEGDTEAADLLAKAFGKAGEGLVELRRIETAEEISGQMAGARNVVYLPQGQQTLLSLPQ 272 MAAQ FNR+GQLG+GVA+AGGV SALYNVDGGHRAVIFDRF+GIK V+GEGTHF IPWVQKPIIFDIRSRP+NVP ITGSKDLQNVNITLR+LFRP PD+LP IYT LG+DY++RVLPSIT EVLKAVVAQFDAGELITQRE VS ++ +L RA QFGLILDDISITH TFG+EFT AVELKQVAQQ+AEKARFLVE AEQ KKAA+ISAEGD +AA LLAK+ +AGEGLVELRRIE AE+I+ ++ +R V YLP GQ LL+LPQ Sbjct: 1 MAAQFFNRIGQLGLGVALAGGVLNSALYNVDGGHRAVIFDRFAGIKNLVVGEGTHFFIPWVQKPIIFDIRSRPRNVPVITGSKDLQNVNITLRILFRPVPDSLPKIYTILGVDYDERVLPSITTEVLKAVVAQFDAGELITQREVVSQKVSEDLMDRASQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVISAEGDAQAASLLAKSLAEAGEGLVELRRIEAAEDIAHNLSKSRQVAYLPPGQNVLLNLPQ 272 The following BLAST results are available for this feature:
BLAST of l237Cc vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of l237Cc vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of l237Cc vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold336_size202805:35466..36284+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold336_size202805-processed-gene-0.4 ID=snap_masked-scaffold336_size202805-processed-gene-0.4|Name=l237Cc|organism=Tigriopus kingsejongensis|type=gene|length=819bp|location=Sequence derived from alignment at scaffold336_size202805:35466..36284+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'l237Cc' has the following synonyms
Add to Basket
|