zinc finger protein partial, snap_masked-scaffold371_size192504-processed-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Namezinc finger protein partial
Unique Namesnap_masked-scaffold371_size192504-processed-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076256|ref|XP_018021704.1| (PREDICTED: zinc finger protein rotund-like isoform X2 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 4.791e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  154 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 224
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076264|ref|XP_018021709.1| (PREDICTED: zinc finger protein rotund-like isoform X6 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 5.257e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  123 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 193
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076260|ref|XP_018021707.1| (PREDICTED: zinc finger protein rotund-like isoform X4 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 5.268e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  137 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 207
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076268|ref|XP_018021711.1| (PREDICTED: zinc finger protein rotund-like isoform X8 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 5.302e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  115 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 185
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076254|ref|XP_018021703.1| (PREDICTED: zinc finger protein rotund-like isoform X1 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 5.497e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  162 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 232
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076272|ref|XP_018021713.1| (PREDICTED: zinc finger protein rotund-like isoform X10 [Hyalella azteca])

HSP 1 Score: 61.6178 bits (148), Expect = 5.718e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  100 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 170
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076262|ref|XP_018021708.1| (PREDICTED: zinc finger protein rotund-like isoform X5 [Hyalella azteca])

HSP 1 Score: 61.2326 bits (147), Expect = 6.337e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  134 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 204
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076258|ref|XP_018021705.1| (PREDICTED: zinc finger protein rotund-like isoform X3 [Hyalella azteca])

HSP 1 Score: 61.2326 bits (147), Expect = 6.342e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  139 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 209
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076270|ref|XP_018021712.1| (PREDICTED: zinc finger protein rotund-like isoform X9 [Hyalella azteca])

HSP 1 Score: 61.2326 bits (147), Expect = 6.567e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:  112 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 182
[Close]
BLAST of zinc finger protein partial vs. nr
Match: gi|1067076274|ref|XP_018021714.1| (PREDICTED: zinc finger protein rotund-like isoform X11 [Hyalella azteca])

HSP 1 Score: 61.2326 bits (147), Expect = 7.081e-9
Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   13 QHMG----IYGQRSNSSASSSPPAVSGGGGLVVPQPINAAAKMGGGGAQMGGHSNSNGGGSGATGRKYQCKMCPQI 84
            QHM     +Y + + S+AS+SPP VS    L+VPQPIN A KM       G   N   GG+G   RKYQCKMCPQI
Sbjct:   97 QHMAPSSALYPRSNGSAASTSPPTVSTPSMLIVPQPIN-AVKMPTSPT--GHLHNQANGGNGV--RKYQCKMCPQI 167
The following BLAST results are available for this feature:
BLAST of zinc finger protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of zinc finger protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of zinc finger protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 21
Match NameE-valueIdentityDescription
gi|1067076256|ref|XP_018021704.1|4.791e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076264|ref|XP_018021709.1|5.257e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076260|ref|XP_018021707.1|5.268e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076268|ref|XP_018021711.1|5.302e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076254|ref|XP_018021703.1|5.497e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076272|ref|XP_018021713.1|5.718e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076262|ref|XP_018021708.1|6.337e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076258|ref|XP_018021705.1|6.342e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076270|ref|XP_018021712.1|6.567e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]
gi|1067076274|ref|XP_018021714.1|7.081e-950.00PREDICTED: zinc finger protein rotund-like isoform... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold371_size192504supercontigscaffold371_size192504:48051..49825 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold371_size192504-processed-gene-0.9-mRNA-1snap_masked-scaffold371_size192504-processed-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold371_size192504:48051..49825-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold371_size192504-processed-gene-0.9 ID=snap_masked-scaffold371_size192504-processed-gene-0.9|Name=zinc finger protein partial|organism=Tigriopus kingsejongensis|type=gene|length=1775bp|location=Sequence derived from alignment at scaffold371_size192504:48051..49825- (Tigriopus kingsejongensis)
ATGTTTACAAGTGAGCCGTTATGGGACCGGTTGTAAAGTTCACTTGTTGT
TAGCTACTCTGAAAAATTAGCAATACTTTTTACAACCCGTCACAGCCGGT
CTCTGGTGGGCCAGGTTATGGCCAAACAAGGTGAATCCAATCGAGCCGAT
CCGGAAAGATGAGGAGAGAGTATGGATCCAATTGGATTTTCCACCCCACC
CTCGCACCCAAAGCCGCAGATTCAACTGGCCTTTTTTGTGGCTCGACCCT
GATTGAAAATCCAAGTAGATTTCAATTTGGAGGAGAGAGAGAGAGAGACG
CACTTTTTGTACATGACCGCATGGCCCTTTTTGCCCAATTGAAATTGTGT
GTGTGTGGCTGAGGCATGGTTCAAAGGCTCGTCGTCCGTACCGTATTGGA
CCCACCGGAGAAACACATGGCAAATGATAAACCAGACCTCTTCGCCTTCC
CCTCCAATTTAAATGCATGGCTAATTCATCCATCATCATCTACCCAATAT
GACGTCATTTCAAGGCGTGTTCCCAATTTTCTCTCTCCGTGAAACTCCAT
TTCAAACCCCGAAACGGTTTTTACAGGGTGCAAAAACGGTCTCTAATATT
CGAAGGAGAAGACAGCAAAAAGTCAACCCTTCGACCCGACACTCGAGAAG
AGTGTGGGCCTCAAGATATGTGGAGCTTGCCAGAAGCTACGGGGTTACAA
ACACTCTCTCCTGCTTTGGATGTGGAGCATGTTTTTTCAAACTCTCATTG
ACTTCCTGGGATAAATAAAGGTGGCTAGAGCAAGTTTCCAACTGGAGGAC
ATCAACATCAGACACTGGGTTGACAACTTTTCAAGTGCTGAAACAATTAT
CGGAATCAGATCCAATCACACTCCCTCGCACTTGCACTTGTTCAGACACA
CGATAATATCACTCTCTGTATCAACTGTTTCCAGCTTTGGCCGAAAAGAG
CAGCCCAATCAACACGCCACATGAATAATTTACTAGAAGGCTATAACCAT
GTCGTATTTGGGAGGGCGAACCCTCGGCTTTCTTTCGCCAAGAATCAAAA
GCTGACAGATTGAAATCAAATGCTGTCCTCGCCCTTCTGATCCCACTGTT
ACGTGGGCCTCAAATCAAAGATTGTCTCTCTTTTGTTGGTCCACAAAATA
GATCCTGCGCGCTTTCTTCCAAGGCGGCAATTTTAAAACCAGGTCATTGG
GTTCACGTCACCCAAGTAACTTCCGCCTTACAAATTGACCCCCACACTCT
CTCAATCAGGAACTTCGGAATTTAGCTCGAGGTTTAGAAGTTATTACACA
CATGGGTGTGATAAATCTCCATTTCATTGATCTTCTAGGCCTGGACGACG
GTCGCCTGGATCCTCAGCACATGGGCATCTACGGCCAAAGAAGTAATTCC
TCTGCCTCATCCTCGCCTCCGGCTGTGTCTGGTGGAGGCGGGCTAGTGGT
GCCGCAGCCCATTAATGCGGCCGCGAAAATGGGCGGTGGCGGAGCTCAAA
TGGGCGGTCATTCAAACAGCAATGGAGGGGGCAGTGGGGCCACTGGAAGA
AAGTATCAGTGCAAGATGTGTCCACAGGTAGGTCCATCACCCAAATGCCC
GTGTAACCTATTACTCGTAGCCATCTTAAGACTCTTCAAATGTGGTCTGC
ATGTATGATAGGGGGATTTGACAGCCACTCCCTGGGCTATTCTCGTCCAA
GGTGGGGGGCCAACGACATTCAATGTTAATCGCTGCAAGATAGCCCTTCA
AGCCTTGATGAGCATCAATGAATAA
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Synonyms
The feature 'zinc finger protein partial' has the following synonyms
Synonym
Tk05697
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