40s ribosomal protein s30, snap_masked-scaffold397_size184017-processed-gene-0.8 (gene) Tigriopus kingsejongensis

Overview
Name40s ribosomal protein s30
Unique Namesnap_masked-scaffold397_size184017-processed-gene-0.8
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 40s ribosomal protein s30 vs. L. salmonis genes
Match: EMLSAG00000007119 (supercontig:LSalAtl2s:LSalAtl2s401:551543:551923:-1 gene:EMLSAG00000007119 transcript:EMLSAT00000007119 description:"augustus_masked-LSalAtl2s401-processed-gene-4.2")

HSP 1 Score: 152.525 bits (384), Expect = 2.432e-49
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0 
Query:    1 MQLIVR-SQSTYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR S  TY + AES  DL A+V +QEGS ++ ++ AG P+  +  L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSTGTYAVNAESTSDLWAEVVRQEGSQEISIFAAGNPVEKETSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|51316582|sp|P62866.1|RS30_BOVIN (RecName: Full=40S ribosomal protein S30 >gi|51316583|sp|P62867.1|RS30_MUSSI RecName: Full=40S ribosomal protein S30 >gi|51338624|sp|P62863.1|RS30_PIG RecName: Full=40S ribosomal protein S30 >gi|51338625|sp|P62864.1|RS30_RAT RecName: Full=40S ribosomal protein S30 >gi|51338654|sp|P62860.1|RS30_CRIGR RecName: Full=40S ribosomal protein S30 >gi|51338655|sp|P62861.1|RS30_HUMAN RecName: Full=40S ribosomal protein S30; AltName: Full=Small ribosomal subunit protein eS30 >gi|51338656|sp|P62862.1|RS30_MOUSE RecName: Full=40S ribosomal protein S30 >gi|124053371|sp|P0C2F0.1|RS30_PONAB RecName: Full=40S ribosomal protein S30)

HSP 1 Score: 84.7297 bits (208), Expect = 6.942e-22
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:   65 KVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            KVHGSLARAGKVRGQTPK  A +EKKKKKTGR KRR+QYNRRFVNVV TFG+KKGPN+NS
Sbjct:    1 KVHGSLARAGKVRGQTPK-VAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|6831662|sp|Q9W6Y0.2|RS30_ORYLA (RecName: Full=40S ribosomal protein S30)

HSP 1 Score: 83.5741 bits (205), Expect = 1.814e-21
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:   65 KVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            KVHGSLARAGKVRGQTP V+   E+K+++ GR KRRIQYNRRFVNVV TFG+KKG N+NS
Sbjct:    1 KVHGSLARAGKVRGQTPNVD-KHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|22096379|sp|P49689.3|RS30_ARATH (RecName: Full=40S ribosomal protein S30)

HSP 1 Score: 69.707 bits (169), Expect = 5.569e-16
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0 
Query:   64 GKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSN 123
            GKVHGSLARAGKVRGQTPKV   ++KKK + GR  +R+Q+NRRFV  V  FG+K+GPNS+
Sbjct:    2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPR-GRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|6831661|sp|O96269.1|RS30_PLAF7 (RecName: Full=40S ribosomal protein S30)

HSP 1 Score: 66.2402 bits (160), Expect = 1.359e-14
Identity = 39/59 (66.10%), Postives = 44/59 (74.58%), Query Frame = 0 
Query:   64 GKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNS 122
            GKVHGSLARAGKV+ QTPKV    +KKK+ TGR K+R  YNRRF +     GRKKGPNS
Sbjct:    2 GKVHGSLARAGKVKNQTPKV-PKLDKKKRLTGRAKKRQLYNRRFSD---NGGRKKGPNS 56
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|122057699|sp|Q556Y1.1|RS30_DICDI (RecName: Full=40S ribosomal protein S30)

HSP 1 Score: 65.4698 bits (158), Expect = 3.310e-14
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0 
Query:   64 GKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNS 122
            GKVHG L RAGKVR  TPK +  EEK+K K GR K+R+ +NRR V  VA FG+KKG N+
Sbjct:    2 GKVHGGLNRAGKVRNATPKKD-KEEKRKPKVGRAKKRMIFNRRNVAAVAGFGKKKGYNT 59
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|857338648|sp|P0CT62.1|RS30A_SCHPO (RecName: Full=40S ribosomal protein S30-A >gi|857338654|sp|P0CT63.1|RS30_SCHPO RecName: Full=40S ribosomal protein S30-B)

HSP 1 Score: 63.5438 bits (153), Expect = 1.266e-13
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0 
Query:   64 GKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            GKVHGSLARAGKV+ QTPKVE  +EK K+  GR  +R+ Y RRFVNV    G K+  N +S
Sbjct:    2 GKVHGSLARAGKVKSQTPKVE-KQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPSS 61
[Close]
BLAST of 40s ribosomal protein s30 vs. SwissProt
Match: gi|338819349|sp|P0CX33.1|RS30A_YEAST (RecName: Full=40S ribosomal protein S30-A; AltName: Full=Small ribosomal subunit protein eS30-A >gi|338819350|sp|P0CX34.1|RS30B_YEAST RecName: Full=40S ribosomal protein S30-B; AltName: Full=Small ribosomal subunit protein eS30-B)

HSP 1 Score: 53.1434 bits (126), Expect = 1.724e-9
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:   65 KVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKK 118
            KVHGSLARAGKV+ QTPKVE +E+  KK  GR  +R+ Y RRFVNV    G+++
Sbjct:    3 KVHGSLARAGKVKSQTPKVEKTEK-PKKPKGRAYKRLLYTRRFVNVTLVNGKRR 55
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|290562766|gb|ADD38778.1| (40S ribosomal protein S30 [Lepeophtheirus salmonis])

HSP 1 Score: 152.525 bits (384), Expect = 2.278e-45
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0 
Query:    1 MQLIVR-SQSTYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR S  TY + AES  DL A+V +QEGS ++ ++ AG P+  +  L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSTGTYAVNAESTSDLWAEVVRQEGSQEISIFAAGNPVEKETSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|225711818|gb|ACO11755.1| (40S ribosomal protein S30 [Lepeophtheirus salmonis])

HSP 1 Score: 152.525 bits (384), Expect = 2.805e-45
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0 
Query:    1 MQLIVR-SQSTYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR S  TY + AES  DL A+V +QEGS ++ ++ AG P+  +  L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSTGTYAVNAESTSDLWAEVVRQEGSQEISIFAAGNPVEKETSLEALSGLTLDVNVKLPGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|225713444|gb|ACO12568.1| (40S ribosomal protein S30 [Lepeophtheirus salmonis])

HSP 1 Score: 150.599 bits (379), Expect = 1.465e-44
Identity = 82/127 (64.57%), Postives = 100/127 (78.74%), Query Frame = 0 
Query:    1 MQLIVR-SQSTYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR S  TY + AES  DL A+V +QEGS ++ ++ AG P+  +  L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GP+SNS
Sbjct:    1 MQLLVRGSTGTYAVNAESTSDLWAEVVRQEGSQEISIFAAGNPVEKETSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPDSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|225710992|gb|ACO11342.1| (40S ribosomal protein S30 [Caligus rogercresseyi])

HSP 1 Score: 150.214 bits (378), Expect = 1.746e-44
Identity = 82/127 (64.57%), Postives = 98/127 (77.17%), Query Frame = 0 
Query:    1 MQLIVRSQS-TYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR  S TY + AES  +L +Q+  QEGS +V ++  G P+ A   L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSSGTYAVNAESTSELWSQIVAQEGSEEVSVFATGNPVDASTSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|225708962|gb|ACO10327.1| (40S ribosomal protein S30 [Caligus rogercresseyi])

HSP 1 Score: 150.214 bits (378), Expect = 1.824e-44
Identity = 83/127 (65.35%), Postives = 98/127 (77.17%), Query Frame = 0 
Query:    1 MQLIVRSQS-TYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR  S TY + AES  +L  Q+  QEGS +V ++ AG P+ A   L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSSGTYAVNAESTSELWPQIVAQEGSEEVSVFAAGNPVDASTSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|225711952|gb|ACO11822.1| (40S ribosomal protein S30 [Lepeophtheirus salmonis])

HSP 1 Score: 149.058 bits (375), Expect = 6.786e-44
Identity = 82/127 (64.57%), Postives = 99/127 (77.95%), Query Frame = 0 
Query:    1 MQLIVR-SQSTYVLQAESFEDLHAQVCQQEGSSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR S  TY + AES  D  A+V +QEGS ++ ++ AG P+  +  L  +   T+DVN+ L GGKVHGSLARAGKVRGQTPKVEA +EKKKKKTGR KRRIQYNRRFVNVV +FGR++GPNSNS
Sbjct:    1 MQLLVRGSTGTYAVNAESTSDPWAEVVRQEGSQEISIFAAGNPVEKETSLEALSGLTLDVNVKLLGGKVHGSLARAGKVRGQTPKVEA-QEKKKKKTGRAKRRIQYNRRFVNVVQSFGRRRGPNSNS 126
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|1050812867|gb|ANZ80586.1| (ubiquitin/ribosomal S30 fusion protein [Penaeus monodon])

HSP 1 Score: 147.132 bits (370), Expect = 3.509e-43
Identity = 80/133 (60.15%), Postives = 102/133 (76.69%), Query Frame = 0 
Query:    1 MQLIVRSQSTYVLQ---AESFEDLHAQVCQQEG--SSDVLLYLAGRPLTAD----ADLVPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQ+ VRS+ T+V++    ++  D+ + +CQ EG   ++V LY AG PL  D    A+L  +A IDVN+ LKGGKVHGSL+RAGKV+GQTPKVE  +EK+K KTGR KRRIQYNRRFVNVVA+FG+K+GPNSNS
Sbjct:    1 MQIFVRSEVTHVVENAEQQTVGDVRSFICQAEGLPETEVRLYAAGSPLDNDSFPLANLNTDA-IDVNVALKGGKVHGSLSRAGKVKGQTPKVE-KKEKRKSKTGRAKRRIQYNRRFVNVVASFGKKRGPNSNS 131
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|961376422|gb|ALS04955.1| (40S ribosomal protein S30 [Pseudodiaptomus poplesia])

HSP 1 Score: 145.206 bits (365), Expect = 2.187e-42
Identity = 79/131 (60.31%), Postives = 98/131 (74.81%), Query Frame = 0 
Query:    1 MQLIVRSQSTYVLQA---ESFEDLHAQVCQQEGSSDVL--LYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQL+VR+QST+V++    +S ++L AQ+ Q EG +  +  L+  G  L    +L  +    +D+ +PL GGKVHGSLARAGKVRGQTPKVEA E KK+KKTGR KRRIQYNRRFVNVV TFGRKKGPN+NS
Sbjct:    1 MQLLVRAQSTHVVEVSPEQSVQELKAQLSQLEGVAPEMMNLFCCGSILEDGMNLSSLENQALDLTVPLLGGKVHGSLARAGKVRGQTPKVEAGE-KKRKKTGRAKRRIQYNRRFVNVVETFGRKKGPNANS 130
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|961375730|gb|ALS04609.1| (40S ribosomal protein S30 [Pseudodiaptomus poplesia] >gi|961376102|gb|ALS04795.1| 40S ribosomal protein S30 [Pseudodiaptomus poplesia] >gi|961376288|gb|ALS04888.1| 40S ribosomal protein S30 [Pseudodiaptomus poplesia])

HSP 1 Score: 140.198 bits (352), Expect = 2.028e-40
Identity = 85/131 (64.89%), Postives = 94/131 (71.76%), Query Frame = 0 
Query:    1 MQLIVRSQSTYVLQAE---SFEDLHAQVCQQEG--SSDVLLYLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQLIVRSQST+VL      + E L  Q+   EG     + L+ +G PL  D  L  +    +D+ IPL GGKVHGSLARAGKVRGQTPKVEA E KKKKKTGR KRRIQYNRRFVNVV TFGRKKGPNSNS
Sbjct:    1 MQLIVRSQSTHVLDVAPDANVEVLRKQLALLEGVEPESLNLFCSGSPLEDDVSLSTLENLAVDLTIPLLGGKVHGSLARAGKVRGQTPKVEAGE-KKKKKTGRAKRRIQYNRRFVNVVETFGRKKGPNSNS 130
[Close]
BLAST of 40s ribosomal protein s30 vs. nr
Match: gi|1325283891|ref|XP_023326639.1| (ubiquitin-like protein FUBI [Eurytemora affinis])

HSP 1 Score: 139.043 bits (349), Expect = 5.671e-40
Identity = 83/131 (63.36%), Postives = 95/131 (72.52%), Query Frame = 0 
Query:    1 MQLIVRSQSTYVLQAE---SFEDLHAQVCQQEGSSDVLL--YLAGRPLTADADL--VPEATIDVNIPLKGGKVHGSLARAGKVRGQTPKVEASEEKKKKKTGRCKRRIQYNRRFVNVVATFGRKKGPNSNS 124
            MQLIVRSQ+T+VL      + E L +Q+   EG    +L  +  G PL  +  L  +    +D+ IPL+GGKVHGSLARAGKVRGQTPKVEA E KKKKKTGR KRRIQYNRRFVNVV TFGRKKGPNSNS
Sbjct:    1 MQLIVRSQATHVLDVSPDANVEVLRSQLALLEGVEPEMLNLFCCGSPLENEMSLSALENQAVDLTIPLRGGKVHGSLARAGKVRGQTPKVEAGE-KKKKKTGRAKRRIQYNRRFVNVVETFGRKKGPNSNS 130
The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s30 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000071192.432e-4965.35supercontig:LSalAtl2s:LSalAtl2s401:551543:551923:-... [more]
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BLAST of 40s ribosomal protein s30 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|51316582|sp|P62866.1|RS30_BOVIN6.942e-2285.00RecName: Full=40S ribosomal protein S30 >gi|513165... [more]
gi|6831662|sp|Q9W6Y0.2|RS30_ORYLA1.814e-2175.00RecName: Full=40S ribosomal protein S30[more]
gi|22096379|sp|P49689.3|RS30_ARATH5.569e-1666.67RecName: Full=40S ribosomal protein S30[more]
gi|6831661|sp|O96269.1|RS30_PLAF71.359e-1466.10RecName: Full=40S ribosomal protein S30[more]
gi|122057699|sp|Q556Y1.1|RS30_DICDI3.310e-1461.02RecName: Full=40S ribosomal protein S30[more]
gi|857338648|sp|P0CT62.1|RS30A_SCHPO1.266e-1359.02RecName: Full=40S ribosomal protein S30-A >gi|8573... [more]
gi|338819349|sp|P0CX33.1|RS30A_YEAST1.724e-959.26RecName: Full=40S ribosomal protein S30-A; AltName... [more]
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BLAST of 40s ribosomal protein s30 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|290562766|gb|ADD38778.1|2.278e-4565.3540S ribosomal protein S30 [Lepeophtheirus salmonis... [more]
gi|225711818|gb|ACO11755.1|2.805e-4565.3540S ribosomal protein S30 [Lepeophtheirus salmonis... [more]
gi|225713444|gb|ACO12568.1|1.465e-4464.5740S ribosomal protein S30 [Lepeophtheirus salmonis... [more]
gi|225710992|gb|ACO11342.1|1.746e-4464.5740S ribosomal protein S30 [Caligus rogercresseyi][more]
gi|225708962|gb|ACO10327.1|1.824e-4465.3540S ribosomal protein S30 [Caligus rogercresseyi][more]
gi|225711952|gb|ACO11822.1|6.786e-4464.5740S ribosomal protein S30 [Lepeophtheirus salmonis... [more]
gi|1050812867|gb|ANZ80586.1|3.509e-4360.15ubiquitin/ribosomal S30 fusion protein [Penaeus mo... [more]
gi|961376422|gb|ALS04955.1|2.187e-4260.3140S ribosomal protein S30 [Pseudodiaptomus poplesi... [more]
gi|961375730|gb|ALS04609.1|2.028e-4064.8940S ribosomal protein S30 [Pseudodiaptomus poplesi... [more]
gi|1325283891|ref|XP_023326639.1|5.671e-4063.36ubiquitin-like protein FUBI [Eurytemora affinis][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold397_size184017supercontigscaffold397_size184017:83314..84085 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:intracellular
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold397_size184017-processed-gene-0.8-mRNA-1snap_masked-scaffold397_size184017-processed-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold397_size184017:83314..84085+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold397_size184017-processed-gene-0.8 ID=snap_masked-scaffold397_size184017-processed-gene-0.8|Name=40s ribosomal protein s30|organism=Tigriopus kingsejongensis|type=gene|length=772bp|location=Sequence derived from alignment at scaffold397_size184017:83314..84085+ (Tigriopus kingsejongensis)
ATCGCCCTTTCCGGAATAAATTCGACCAGGTAAGATAGCGTCACGCCACG
CTCAGCCCGACGCCCCCTGAGCCCGCCTCACCGCCCCGCCCCCGCCTCTT
TCCAGTCGGTGCCGTTCCCCGCCCACGGTTTCATCATGCAGTTGATCGTG
CGCAGCCAGTCGACCTATGTCCTGCAGGCCGAGTCCTTCGAGGACTTGCA
CGCCCAAGTGTGCCAACAAGAAGGCTCCTCGGATGTGCTCCTCTACTTGG
CCGGTCGCCCCCTCACGGCCGACGCGGACTTGGTGCCCGAGGCCACCATT
GACGTGAACATCCCGCTCAAGGGAGGCAAGGTGAGTGCCGCCCGCTCCGA
TCCAATCTGAGCCCTTGGCCAGGCTGAGATCGAGGCCATCAGAAGCCGCC
ATTCGGCGCCCCGGTCGCCAGCCTCCGCCCGTCCGGGACGGTCTCCACGG
GCTAGTCCCGGGCTAGTCCCAGGCTAGTCCCAGGCTAGCCGGATCGCTGA
ACTAATCCACGGTATTTTTGCGTTGGCCAGGTGCACGGATCTTTGGCTCG
TGCCGGCAAGGTCCGCGGTCAAACCCCCAAGGTCGAGGCTTCGGAGGAGA
AGAAAAAGAAGAAGACCGGACGCTGCAAGCGACGCATCCAGTATAACCGA
CGCTTCGTCAATGTGGTGGCCACTTTCGGACGCAAGAAGGGACCCAATTC
CAACTCCGCTTAAGATTGCCTGGGGCCTGCCGACCTCGTTCAATGTGGGC
CAATAAAGATTTGTGGGTTAAA
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Synonyms
The feature '40s ribosomal protein s30' has the following synonyms
Synonym
Tk01040
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