cleavage stimulation factor 50 kda subunit, snap_masked-scaffold403_size186359-processed-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000005728 (supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-1 gene:EMLSAG00000005728 transcript:EMLSAT00000005728 description:"augustus_masked-LSalAtl2s309-processed-gene-7.10") HSP 1 Score: 481.485 bits (1238), Expect = 1.177e-168 Identity = 234/354 (66.10%), Postives = 281/354 (79.38%), Query Frame = 0 Query: 120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------IKNSRNEVLGP--GLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQ 464 PEF I GN++KNR++LYRL+ISQLFYDG+QQ+A+QL + +P CPPSE+L +V+LG+E++ + + + N + G GLDLEFDT++ APEPA YET Y SHK CRAGAFS+DG LCATGS DASIK+LDV+RMLAKSN + + E GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TI DAEPV S++FHP+GDFLLVGC P+VRLYD NT QCFV S+P H E+ VK+S DGK+Y S+S DGSIKIWDG+SS+VI TF AHDGAEVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAGATG+Q Sbjct: 15 PEFTIGGNVLKNRDALYRLIISQLFYDGYQQVALQLSGIVGADPPCPPSERLHKVVSLGLEKERNAIXAXKVSAASNGLGGDLYGLDLEFDTEMRXEAPEPALYETXYXXSHKAFCRAGAFSNDGQLCATGSADASIKVLDVDRMLAKSNNDIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTIIDAEPVQSLSFHPSGDFLLVGCEHPVVRLYDVNTSQCFVSSIPHQRHTSEVTMVKFSNDGKIYASSSTDGSIKIWDGVSSKVINTFDEAHDGAEVCSVYFTRNGKYILSSGKDSLIKLWELSTSRCLIAYTGAGATGRQ 366
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 93.2041 bits (230), Expect = 1.110e-20 Identity = 69/250 (27.60%), Postives = 116/250 (46.40%), Query Frame = 0 Query: 210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGH--PVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 P Y + H A FS +G A+ S D IK+ G + +T+ H ++ + + +L S S D T+K+++ S K +K ++ V F+P + ++ G VR++D TG+C + ++P+H + +V ++ DG L VS+S DG +IWD S Q + T + +D V +F+ NGKY+L++ D+ KLWE S +CL Y+G Sbjct: 17 RPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKV---------------------WGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNY--VFCCNFNPQSNLVVSGSFDESVRIWDVRTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLID-NDNPPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSG 239 HSP 2 Score: 88.1965 bits (217), Expect = 5.129e-19 Identity = 58/241 (24.07%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRN-GKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 ++ HK A+SSD L + S D ++KI E ++TL H + V +F+P+ ++ SGS D +V+++D K +KT+ ++PV+++ F+ G ++ + R++DT +GQC + + + + VK+SP+GK ++A++D ++K+W+ + + T++ + A F+ GK+++S +D++ +W L T + G Sbjct: 68 ISGHKLGISDVAWSSDSRLLVSASDDKTLKIW-------------------ELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWD---VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDN--PPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQG 284
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006156 (supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-1 gene:EMLSAG00000006156 transcript:EMLSAT00000006156 description:"augustus_masked-LSalAtl2s336-processed-gene-4.9") HSP 1 Score: 72.4034 bits (176), Expect = 1.027e-13 Identity = 73/274 (26.64%), Postives = 121/274 (44.16%), Query Frame = 0 Query: 277 IRTLYDHMDEVTALDFHP---------KEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE----PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPD-EATTSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 IRTL H + ++ F+P K+P +AS S+D +VKL++ ++ + I D E V+ A+HP+G FL + RL+D Q + H + + + + DG L ++ +D +IWD + Q I G + ++R+G + + D+ CK+W+L + I YT T N VF+ ED+++ + T L W + T + L SL GH+ + SP TCS D + W Sbjct: 239 IRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNL------ESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQ---EVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKG--IIGVDWSRDGYHCATGSSDNACKIWDLRKRK--IEYTIPAHTNVVSN---VVFD--EDYLLTASYDGTAKL--WARK--TWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14") HSP 1 Score: 70.4774 bits (171), Expect = 2.009e-13 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0 Query: 277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGC-HQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC 421 I++ Y H +EV ++ + P+ LASGS D T+K++ K S +K + A + +I + +P D +LV + VRL+D G C HQ + SV +SPDGK S S D + IW ++ +++ + EVC Sbjct: 191 IKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKA--IYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLT---RHQETVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVC 339 HSP 2 Score: 51.6026 bits (122), Expect = 2.508e-7 Identity = 63/265 (23.77%), Postives = 106/265 (40.00%), Query Frame = 0 Query: 231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEH---LSNPNHEQGGHPVI-----RT--LYD------------HMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHH---HQREILSVKWS--------PDGKL-YVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGA 460 ++S G+L ATG D +I L K+ +H + + G+ ++ RT ++D H + +D+ E AS S+D K K +K +K+ V SI + P G FL G + ++++ C H H + I ++KWS P+ L VSAS D ++++WD + T + V S F+ +GK++ S D +W + + Y G GA Sbjct: 82 WNSSGSLLATGFYDGIARIWSTTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDES-FASCSKD---KCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVW------CMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQE--TVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGA 334
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0") HSP 1 Score: 70.8626 bits (172), Expect = 2.143e-13 Identity = 52/204 (25.49%), Postives = 87/204 (42.65%), Query Frame = 0 Query: 278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQC---FVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQF---------------------TRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 RTL H D V + F +L S S D ++K++DF K ++ V+S+ F P GD++L +++++T TG C + G H+ + +V+ DG L S S D S+++W S++ HD C + R G ++ S +D K+W++ST + L Y G Sbjct: 116 RTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWDFQTYECLKTLQG--HDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTYTG------HREWVRNVRVLHDGSLLASCSNDQSVRVW-STSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVG 310 HSP 2 Score: 68.5514 bits (166), Expect = 1.241e-12 Identity = 64/244 (26.23%), Postives = 103/244 (42.21%), Query Frame = 0 Query: 231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPD----------------------GKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRC 451 F S G L + S D SIKI D + + ++TL H V+++ F P + S SRD T+K+++ T+ ++T T E V ++ G L + VR++ T+T C + H H E +S W+P+ G S S D +IK+WD + QV+ T+ HD V + GKY+LS+ D ++W+++ RC Sbjct: 130 FDSPGKLLVSCSADMSIKIWDFQ-------------------TYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWE---TATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDC-KDELRDHDHVVECIS--WAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYV-GHDNW-VRGLVWHPGGKYLLSASDDKTIRVWDIAHKRC 346
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42") HSP 1 Score: 69.3218 bits (168), Expect = 3.744e-13 Identity = 43/153 (28.10%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 287 VTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDS 439 + ++ + P +ASG+ D + +F S + K+ A P+ S+AF LL G ++LY+ + G +G++ H +LSV++SPD + +VS S D S+K+W+ + Q + TF + D +V +A ++ NG+ + + +D+ Sbjct: 154 ILSIAYSPDGKYIASGATDGIINIF--SMPTGKQXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGS-LIGTLSGH--TSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFTDHSD--QVWAASYSPNGRKIATVSEDA 299 HSP 2 Score: 52.7582 bits (125), Expect = 8.082e-8 Identity = 42/165 (25.45%), Postives = 75/165 (45.45%), Query Frame = 0 Query: 292 FHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYT 456 F P L SG+ V ++ +T K T + + SIA+ P G ++ G I+ ++ TG+ H I S+ +S D K ++ S DG +K+++ +I T + + V S QF+ + + +S D K+WE +T +C+ +T Sbjct: 116 FSPDSETLISGANAGKVNIY-CVETGQNKQQLLDTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGK---QXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTLSG--HTSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFT 274
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000000276 (supercontig:LSalAtl2s:LSalAtl2s1041:88294:89557:1 gene:EMLSAG00000000276 transcript:EMLSAT00000000276 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.10") HSP 1 Score: 67.781 bits (164), Expect = 1.166e-12 Identity = 49/187 (26.20%), Postives = 89/187 (47.59%), Query Frame = 0 Query: 266 NPNHEQGGHPVIRTLYDHMDEVTALDFHPK-EPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSV-----KWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWEL 446 N + EQ ++ L H +++ + +HP + + + S D TV+++ + K ++ I D PVT ++ H TGD++L D +G+ SV ++ PDG ++ + + D IKIWD Q +A F H+G+ + + F+ NG Y+ ++ D+ KLW+L Sbjct: 48 NKDTEQ----IVANLKGHSKKISRVIYHPSSDDTVITASHDTTVRVWHVPSSQTLKILR-IHDG-PVTGLSLHATGDYILSTSTDRYWAFTDLRSGRLITKVTADSSAGGASSSVALTCAQFHPDGLIFGTGTSDSEIKIWDLKEQQNVANFP-GHNGS-ITALSFSENGYYLATAADDACVKLWDL 226
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000007279 (supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-1 gene:EMLSAG00000007279 transcript:EMLSAT00000007279 description:"augustus_masked-LSalAtl2s409-processed-gene-1.3") HSP 1 Score: 68.1662 bits (165), Expect = 3.244e-12 Identity = 49/200 (24.50%), Postives = 93/200 (46.50%), Query Frame = 0 Query: 279 TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFH----------PTGDFLLVGCHQPIVRLY-----DTNTGQCFVGSVPSHH---HQREILSVKWSPDGKLYVSASMDGSIKIWDGISS-QVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAG 459 TL H D V AL FHPKEP+L + S D T+K+++ KT+ K T D EPV + H GD + G +R++ D + + SV + H + + ++ + +S S DG++K+W ++ ++ TF + ++G + Y++++ ++ C ++++ T + +I G Sbjct: 395 TLRSHYDGVRALRFHPKEPVLITASEDQTLKMWNLQKTTPVKK-STAFDVEPVYTFRAHRGPVLSLDVSRAGDLIFSGGIDASIRVWNMPSPDIDPYNLYDPSVLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQG 593 HSP 2 Score: 54.6842 bits (130), Expect = 4.354e-8 Identity = 59/251 (23.51%), Postives = 105/251 (41.83%), Query Frame = 0 Query: 210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIE--HLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFD-FSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 EP Y A H+G + S G L +G +DASI++ + + +I+ +L +P+ + +L+ H D V L ++ + L S S D TVKL+ +K + + + P + + +++ +YD TG+ + + I V P + V+A D I+ +D + ++ + AH A V S NG Y++S D +LW + T C+ T Sbjct: 444 EPVYTFRA----HRGPVLSLDVSRAGDLIFSGGIDASIRVWN----MPSPDIDPYNLYDPS------VLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFDNYTGKLTHSMV-AHLEA-VTSIAIDANGLYLISGSHDRSVRLWNIETKTCVQEITA 678 HSP 3 Score: 51.2174 bits (121), Expect = 6.259e-7 Identity = 37/134 (27.61%), Postives = 59/134 (44.03%), Query Frame = 0 Query: 271 QGGHPVIR--TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQ--REILSVKWSPDGKLYVSASMDGSIKIW 400 + G PVI+ T + + +T + HP P+ + D ++ FD + K + E VTSIA G +L+ G H VRL++ T C V + +H + I V + P SA D K++ Sbjct: 581 ETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFD--NYTGKLTHSMVAHLEAVTSIAIDANGLYLISGSHDRSVRLWNIETKTC-VQEITAHRKKFDESIFDVAFHPSSSYIASAGADALAKVF 711
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000008384 (supercontig:LSalAtl2s:LSalAtl2s512:319189:321924:1 gene:EMLSAG00000008384 transcript:EMLSAT00000008384 description:"maker-LSalAtl2s512-augustus-gene-3.19") HSP 1 Score: 65.4698 bits (158), Expect = 8.116e-12 Identity = 58/228 (25.44%), Postives = 101/228 (44.30%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEP----VTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWE 445 H+G R+ F+SDG+ + S D SIK+ VE+ I++ H + V + + + +AS S D ++KLFD + K + + EP ++FHP+G + +G V++YD T + H + V + P G +S S DG +K++D I +Q + + EV + +F+ G+Y S G D+ +W+ Sbjct: 29 HQGPVRSVDFNSDGSKXLSASDDKSIKLWTVEK-------------------QRFIKSFNGHNNWVRSAKWSXBQKXIASVSDDRSLKLFD---ENTGKEIHSFN--EPGRGFGQCLSFHPSGSCIAIGTSDKKVKMYDIRTMKLHQSYTS---HTGPVNQVAFHPSGCYLLSCSSDGFVKMFDIIEAQPVYGLTGHKE--EVTAIEFSPKGEYFSSGGSDNAVFVWK 227
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000011537 (supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1 gene:EMLSAG00000011537 transcript:EMLSAT00000011537 description:"maker-LSalAtl2s799-snap-gene-3.77") HSP 1 Score: 65.4698 bits (158), Expect = 1.321e-11 Identity = 46/171 (26.90%), Postives = 78/171 (45.61%), Query Frame = 0 Query: 277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGCH-QPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKD 438 I++ Y H +EV A+ + P+ LAS S D T+K++ K S ++ ++ + +I + +P D +L VRL+D G C H+ + SV +SPDGK S S D + IW ++ +++ ++ EVC + G V +S D Sbjct: 309 IKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQA--HSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGSCLHXLX---RHKEPVYSVAFSPDGKFLASGSFDKCVHIWSTVTGKLVHSYKGTGGIFEVC---WNSRGDKVGASASD 471
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|8928446|sp|Q9V3J8.1|WDS_DROME (RecName: Full=Protein will die slowly) HSP 1 Score: 95.9005 bits (237), Expect = 2.636e-20 Identity = 71/248 (28.63%), Postives = 117/248 (47.18%), Query Frame = 0 Query: 210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 +P Y + H A FS +G A+ S D IKI E +T+ H ++ + + +L SGS D T+K+++ S + K +K ++ V F+P + ++ G VR++D TG+C + ++P+H + +V ++ DG L VS+S DG +IWD S Q + T + D V +F+ NGKY+L++ D+ KLW+ S +CL YTG Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY----DGKFE---------------KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY--VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 281 HSP 2 Score: 90.5077 bits (223), Expect = 1.807e-18 Identity = 59/241 (24.48%), Postives = 121/241 (50.21%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFT-RNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 ++ HK A+SSD L +GS D ++K+ ++ KS ++TL H + V +F+P+ ++ SGS D +V+++D K +KT+ ++PV+++ F+ G ++ + + R++DT +GQC + + + VK+SP+GK ++A++D ++K+WD + + T+ + A F+ GK+++S +D++ +W L + + G Sbjct: 110 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST--GKS-----------------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD---VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQG 326
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|20532307|sp|Q8YV57.1|Y2124_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein all2124) HSP 1 Score: 98.5969 bits (244), Expect = 3.572e-20 Identity = 65/217 (29.95%), Postives = 110/217 (50.69%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWEL 446 +F+ G L A+ + D ++KI V A ++TL H +EV ++F P LAS SRD TVKL++ S KK +K TD V ++F P G + +RL+D+ +G + S+P+H+ + SV ++PDG + S S D ++K+W ++ TF+ H V S+ F+ +G+Y+ S+ +D K+W++ Sbjct: 1411 SFTPQGDLIASANADKTVKIWRVRDGKA-------------------LKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTD--EVFWVSFSPDGKIIASASADKTIRLWDSFSGN-LIKSLPAHNDL--VYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFS-GHSNV-VYSSSFSPDGRYIASASEDKTVKIWQI 1601 HSP 2 Score: 92.4337 bits (228), Expect = 3.120e-18 Identity = 84/320 (26.25%), Postives = 139/320 (43.44%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE-PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKRPI 540 HK + + S DG A+GS+D +IK+ + L RTL H D V ++ F P +ASG D T+KL+ +TS +KTIT E V ++ F P G L ++L+DT +GQ + H +++V++SPDG+ + S D ++K+W +++ T D V S F+ +GK + S+ D KLW ++ + + T K N + N + D + + +R+ + + GH+G V + P S + S D R W +RP+ Sbjct: 1071 HKDGVISISISRDGQTIASGSLDKTIKLWSRDGRL--------------------FRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLW---QTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTG---HSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDW--VNSLSFSPDGKTLASASADKTIKLWRIADGKLV-------KTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFT-GHSGGVYAVNFLPDSNIIASASLDNTIRLW-QRPL 1353 HSP 3 Score: 75.485 bits (184), Expect = 5.707e-13 Identity = 72/272 (26.47%), Postives = 119/272 (43.75%), Query Frame = 0 Query: 280 LYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE-PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFV----MFPDEATTSLCCWDS-----RNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFWYKRPI 540 L H D V ++ +ASGS D T+KL+ + + +T+ E V S++F P G + G ++L+ T+ G + ++ H ++ + +V +SPDGK SAS D SIK+WD S Q++ T G V + +F+ +G+ + + +D KLW +Q+ + N +D+V PD T + D R A K + +L GHN V + S A + S D + W + I Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLW----SRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDG-TLLKTITGH--EQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAG--VITVRFSPDGQTIAAGSEDKTVKLWH-----------------RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGI 1313 HSP 4 Score: 73.1738 bits (178), Expect = 3.563e-12 Identity = 74/320 (23.12%), Postives = 126/320 (39.38%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTN--TGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHT-EDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 +T H FS DG A GS D ++K+ H Q G +++TL H D V +L F P LAS S D T+KL+ + K +K D+ V + F G + ++L++ + + F G H + +V + PD + SAS+D +I++W +I+ + V + F +G + ++G D +LW L G N+A + T + ++ A ++ W R+ + L +GH+ V + SP + S D + W Sbjct: 1193 LTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW------------------HRQDG-KLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDS--VWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTG------HSGGVYAVNFLPDSNIIASASLDNTIRLW---QRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPG--------NKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTL-IGHDNEVNKVNFSPDGKTLASASRDNTVKLW 1473 HSP 5 Score: 67.3958 bits (163), Expect = 2.065e-10 Identity = 75/315 (23.81%), Postives = 131/315 (41.59%), Query Frame = 0 Query: 231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTED--FVMF-PD-------EATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 FSSDG A+ S D +IK+ + + IE + T H V A++F P I+AS S D T++L+ S ++ + V +++F G + ++L+ + G + ++P + + I + ++P G L SA+ D ++KIW + + T HD EV F+ +GK + S+ +D+ KLW +S + G HT++ +V F PD A ++ WDS + + L HN +V + +P + S D + W Sbjct: 1289 FSSDGKAIASASRDNTIKLWN------RHGIE--------------LETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISP---LEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDG-SLLKTLPGN---KAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLI-GHDN-EVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKG----------------HTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLP-AHNDLVYSVNFNPDGSMLASTSADKTVKLW 1557 HSP 6 Score: 61.6178 bits (148), Expect = 1.194e-8 Identity = 49/178 (27.53%), Postives = 85/178 (47.75%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQ 406 +FS DG + A+ S D +I++ D +I++L H D V +++F+P +LAS S D TVKL+ ++ + T + + V S +F P G ++ V+++ + + ++P HQ ++S +SPDGK +S S+D + KIW S Q Sbjct: 1495 SFSPDGKIIASASADKTIRLWD-------------------SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLW---RSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGH--LLTTLP--QHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQ 1646
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|384872644|sp|Q9UUG8.2|TUP12_SCHPO (RecName: Full=Transcriptional repressor tup12) HSP 1 Score: 96.6709 bits (239), Expect = 7.762e-20 Identity = 87/323 (26.93%), Postives = 126/323 (39.01%), Query Frame = 0 Query: 226 CRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFA-NAHDGAEVCSAQFT------------RNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 R+ AFS DG ATG D I+I D+ + V R L H E+ +LDF L SGS D TV L+D K + T + VT++ F P G F+ G ++R++ T++G V + H H+ + SV +SPDGK VS S+D +IK+W+ Q ++ A + + +C FT +GK+++S KD + W S ++ QL GHN V + SP F T S D RAR W Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQ-------------------KRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHT---DDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSG-TLVEQL--HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWE---LQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW-------------------------------------------------SPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|322518365|sp|C4Q0P6.1|LIS1_SCHMA (RecName: Full=Lissencephaly-1 homolog) HSP 1 Score: 94.7449 bits (234), Expect = 1.008e-19 Identity = 94/359 (26.18%), Postives = 148/359 (41.23%), Query Frame = 0 Query: 193 GPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE-PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQC---FVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTR-----------NGKYVLSSG-KDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 G GL D + P P T +T H+ F + + S DASIK+ D E EH TL H D V + F P LAS S D VKL+DF + + +KT+T + V+S+AF P+GDFL+ +++++ +TG C F+G H I SV+ SP+G L S S D +I+IW + S+ H+ C A + N +L SG +D + W+++ CL G +N + + H ++ ++ WD +N + L+ H+ V + + ++P +T S D W Sbjct: 94 GSGLSDRSDRRDVDAIPRPPAKFT--LTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYE----TGEFEH---------------TLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDF---TIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIG------HTEWIRSVRPSPEGNLLASCSNDHTIRIW-SVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIG------HDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHKTLN-AHSHFVTSLDVNRLAPYAITGSVDQTIHIW 414 HSP 2 Score: 56.9954 bits (136), Expect = 1.812e-7 Identity = 54/238 (22.69%), Postives = 95/238 (39.92%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHP----------TGDFLLV-GCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWE 445 +T H N + AF G + S D +IK+ +V G+ +T H + + ++ P+ +LAS S D T++++ + ++ + A HP LLV G +R +D N G C + + R+++ + P G+L +SAS D +I++WD + + T NAH V S R Y ++ D +W+ Sbjct: 202 LTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEV------------------STGY-CTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLV---FHPHGRLLLSASDDKTIRVWDLKNRRCHKTL-NAHSHF-VTSLDVNRLAPYAITGSVDQTIHIWD 415
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|81908676|sp|Q4V8C4.1|WDR5B_RAT (RecName: Full=WD repeat-containing protein 5B) HSP 1 Score: 93.2041 bits (230), Expect = 1.208e-19 Identity = 76/260 (29.23%), Postives = 112/260 (43.08%), Query Frame = 0 Query: 205 PSSAPE-------PAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 P SAP+ P Y + H + FS +G A+ + DA I I K +TLY H E++ + + L S S D T+KL+D K +K +D V F+P + ++ G V++++ TG+C H I +V + +G L VS S DG +IWD S Q + T A+ V +F+ NGKY+L++ DS KLW+ S RCL YTG Sbjct: 14 PLSAPQRVEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCK-------------------KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDF--VFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLK---TLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLAD-EGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTG 248 HSP 2 Score: 91.6633 bits (226), Expect = 4.240e-19 Identity = 58/221 (26.24%), Postives = 111/221 (50.23%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNG-KYVLSSGKDSLCKLWELST 448 A+SSD + + S D ++K+ DV ++TL H D V DF+P ++ SGS D +VK+++ K +KT++ ++P++++ FH G ++ G + + R++D +GQC + + VK+SP+GK ++A++D ++K+WD + + T+ + A F+ G K+V+S +D++ +W L T Sbjct: 88 AWSSDSSRLVSASDDKTLKLWDVR-------------------SGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE---VKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCL--RTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQT 284 HSP 3 Score: 63.1586 bits (152), Expect = 1.432e-9 Identity = 49/217 (22.58%), Postives = 95/217 (43.78%), Query Frame = 0 Query: 231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDA--EPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDG-KLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLW 444 F+ L +GS D S+KI +V+ ++TL H D ++A+ FH ++ SGS D +++D ++ + ++T+ D PV+ + F P G ++L ++L+D + G+C + + H +++ + +S G K VS S D + IW+ + +++ D + T N + D K+W Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKT-------------------GKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWD---AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRC-LKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTENIIASAALENDKTIKIW 324
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|3023956|sp|Q00808.1|HETE1_PODAS (RecName: Full=Vegetative incompatibility protein HET-E-1) HSP 1 Score: 96.6709 bits (239), Expect = 1.239e-19 Identity = 92/343 (26.82%), Postives = 146/343 (42.57%), Query Frame = 0 Query: 216 TAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIE-HLS-------NPNHEQ----GGHPVIR-----------TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 T + H G ++ AFS DG A+GS D +IKI D +E H S +P+ ++ G I+ TL H V ++ F P +ASGS D T+K++D + + + ++ V S+ F P G + G ++++D +G C + H + SV +SPDG+ S S+DG+IKIWD S T G V S F+ +G+ V S D K+W+ ++ C G G Q+V + + + ++ WD+ + T Q L GH G V+ + SP + S D + W Sbjct: 918 TQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLE--GHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTC---TQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEG--HGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGW------VQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE-GHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246 HSP 2 Score: 92.8189 bits (229), Expect = 1.921e-18 Identity = 85/320 (26.56%), Postives = 132/320 (41.25%), Query Frame = 0 Query: 216 TAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 T + H + + AFS+DG A+GS D +IKI D +TL H V ++ F P +ASGS D T+K++D + + + ++ V S+AF P G + G ++++D +G C + H +LSV +SPDG+ S S D +IKIWD S T G V S F+ +G+ V S D K+W+ ++ C G G Q+V + + ++ WD+ + T Q L GH V + SP + S D + W Sbjct: 834 TQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGT-------------------QTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLE--GHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTC---TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEG--HGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGW------VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE-GHGDSVWSVAFSPDGQRVASGSIDGTIKIW 1120 HSP 3 Score: 72.7886 bits (177), Expect = 4.509e-12 Identity = 57/196 (29.08%), Postives = 87/196 (44.39%), Query Frame = 0 Query: 216 TAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATF 411 T + H + + AFS DG A+GS+D +IKI D +TL H V ++ F P +ASGS D T+K++D + + + ++ V S+AF P G + G ++++DT +G C + H + SV +SPDG+ S S D +IKIWD S T Sbjct: 1086 TQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDA-------------------ASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEG--HGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTC---TQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTL 1257
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|75070930|sp|Q5RE95.1|WDR5B_PONAB (RecName: Full=WD repeat-containing protein 5B) HSP 1 Score: 93.2041 bits (230), Expect = 1.289e-19 Identity = 59/181 (32.60%), Postives = 92/181 (50.83%), Query Frame = 0 Query: 278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 RTLY H E++ + + L S S D T+KL+D + K +KT+ + V F+P + ++ G V++++ TG+C H + +V ++ G L VS S DG +IWD S Q + T + D V +F+ NGKY+L++ D+ KLW+ S RCL YTG Sbjct: 77 RTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMR---SGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLK---TLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVD-DDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 250 HSP 2 Score: 88.1965 bits (217), Expect = 7.363e-18 Identity = 57/221 (25.79%), Postives = 113/221 (51.13%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFT-RNGKYVLSSGKDSLCKLWELST 448 A+SSD + + S D ++K+ D+ ++TL H + V +F+P ++ SGS D TVK+++ K +KT++ ++PV+++ F+ +G ++ G + + R++D +GQC V + + VK+SP+GK ++A++D ++K+WD + + T+ + A F+ GK+++S +D+L +W L T Sbjct: 90 AWSSDSSRLVSASDDKTLKLWDMR-------------------SGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWE---VKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDN--PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 286 HSP 3 Score: 62.003 bits (149), Expect = 3.240e-9 Identity = 50/217 (23.04%), Postives = 96/217 (44.24%), Query Frame = 0 Query: 231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE--PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWS-PDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLW 444 F+ L +GS D ++KI +V+ ++TL H D V+A+ F+ ++ SGS D +++D ++ + +KT+ D + PV+ + F P G ++L ++L+D + G+C + + H +++ + +S GK VS S D + IW+ + +++ D + T N + D KLW Sbjct: 133 FNPPSNLIISGSFDETVKIWEVKT-------------------GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWD---AASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|82232080|sp|Q5M786.1|WDR5_XENTR (RecName: Full=WD repeat-containing protein 5) HSP 1 Score: 92.8189 bits (229), Expect = 1.770e-19 Identity = 63/242 (26.03%), Postives = 120/242 (49.59%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCS-AQFT-RNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 ++ HK A+SSD L + S D ++KI DV ++TL H + V +F+P+ ++ SGS D +V+++D K +KT+ ++PV+++ F+ G ++ + + R++DT +GQC + + + VK+SP+GK ++A++D ++K+WD + + T+ H + C A F+ GK+++S +D+L +W L T + G Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV-------------------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD---VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-CHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQG 299 HSP 2 Score: 90.5077 bits (223), Expect = 1.409e-18 Identity = 57/180 (31.67%), Postives = 98/180 (54.44%), Query Frame = 0 Query: 278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYT 456 +T+ H ++ + + +L S S D T+K++D S+ K +KT+ + V F+P + ++ G VR++D TG+C + ++P+H + +V ++ DG L VS+S DG +IWD S Q + T + D V +F+ NGKY+L++ D+ KLW+ S +CL YT Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD---VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|122136017|sp|Q2KIG2.1|WDR5_BOVIN (RecName: Full=WD repeat-containing protein 5) HSP 1 Score: 92.8189 bits (229), Expect = 1.770e-19 Identity = 61/241 (25.31%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFT-RNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 ++ HK A+SSD L + S D ++KI DV ++TL H + V +F+P+ ++ SGS D +V+++D K +KT+ ++PV+++ F+ G ++ + + R++DT +GQC + + + VK+SP+GK ++A++D ++K+WD + + T+ + A F+ GK+++S +D+L +W L T + G Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV-------------------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD---VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299 HSP 2 Score: 92.8189 bits (229), Expect = 2.056e-19 Identity = 58/181 (32.04%), Postives = 99/181 (54.70%), Query Frame = 0 Query: 278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 +T+ H ++ + + +L S S D T+K++D S+ K +KT+ + V F+P + ++ G VR++D TG+C + ++P+H + +V ++ DG L VS+S DG +IWD S Q + T + D V +F+ NGKY+L++ D+ KLW+ S +CL YTG Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD---VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|48429182|sp|P61964.1|WDR5_HUMAN (RecName: Full=WD repeat-containing protein 5; AltName: Full=BMP2-induced 3-kb gene protein >gi|48429183|sp|P61965.1|WDR5_MOUSE RecName: Full=WD repeat-containing protein 5; AltName: Full=BMP2-induced 3-kb gene protein; AltName: Full=WD repeat-containing protein BIG-3 >gi|123781540|sp|Q498M4.1|WDR5_RAT RecName: Full=WD repeat-containing protein 5) HSP 1 Score: 92.8189 bits (229), Expect = 1.944e-19 Identity = 61/241 (25.31%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFT-RNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 ++ HK A+SSD L + S D ++KI DV ++TL H + V +F+P+ ++ SGS D +V+++D K +KT+ ++PV+++ F+ G ++ + + R++DT +GQC + + + VK+SP+GK ++A++D ++K+WD + + T+ + A F+ GK+++S +D+L +W L T + G Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV-------------------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD---VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 299 HSP 2 Score: 92.8189 bits (229), Expect = 2.279e-19 Identity = 58/181 (32.04%), Postives = 99/181 (54.70%), Query Frame = 0 Query: 278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 +T+ H ++ + + +L S S D T+K++D S+ K +KT+ + V F+P + ++ G VR++D TG+C + ++P+H + +V ++ DG L VS+S DG +IWD S Q + T + D V +F+ NGKY+L++ D+ KLW+ S +CL YTG Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD---VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|795053941|ref|XP_011871011.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X2 [Vollenhovia emeryi]) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+SS+ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNMIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRAKKDSSANLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIT-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|815799842|ref|XP_012220564.1| (PREDICTED: cleavage stimulation factor subunit 1 [Linepithema humile]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 304/431 (70.53%), Postives = 352/431 (81.67%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRNEV----------LGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G E D K++ N + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+SS+ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEVDPKNIIKSREQLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDTSNSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|751218509|ref|XP_011162294.1| (PREDICTED: cleavage stimulation factor subunit 1 [Solenopsis invicta]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDNSTSISTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|951565066|ref|XP_014481393.1| (PREDICTED: cleavage stimulation factor subunit 1 [Dinoponera quadriceps]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 305/437 (69.79%), Postives = 352/437 (80.55%), Query Frame = 0 Query: 113 GGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRN---------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 G N PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G E D K S N LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 3 GQNATKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGAAHEPDRSKKESNNVSTFASSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 438
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|826453264|ref|XP_012532678.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X1 [Monomorium pharaonis]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + PIVRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNVIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPIVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|769832588|ref|XP_011643192.1| (PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1 [Pogonomyrmex barbatus]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 306/449 (68.15%), Postives = 357/449 (79.51%), Query Frame = 0 Query: 102 PAGTQANATTLGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 P+ AN +T+ PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+S NA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 48 PSKNTANQSTM-----KEPEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSSNLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSXNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 490
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|1153833364|ref|XP_020293282.1| (cleavage stimulation factor subunit 1 isoform X1 [Pseudomyrmex gracilis]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 300/438 (68.49%), Postives = 351/438 (80.14%), Query Frame = 0 Query: 112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRN-----------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 + N PE P NIIK+RE+LYRLMISQLFYDGHQ +A+QL N IQ EP CPPS++L HL+ +G + D N LGPGLDLEF+T++ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + + P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGD+L+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 1 MSNNATKEPEVDPKNIIKSRETLYRLMISQLFYDGHQTLAMQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKENTSLSTFASSFDNTLGPGLDLEFETEIQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEVP-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDYLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHSNGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 437
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|225719552|gb|ACO15622.1| (Cleavage stimulation factor 50 kDa subunit [Caligus clemensi]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 303/430 (70.47%), Postives = 351/430 (81.63%), Query Frame = 0 Query: 120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIK----------NSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PEF + GN++KNRE+LYRLMISQLFYDGHQQ+A+QL + EPACPPSE+L +V LGME++ + N+ N + LDLEFDT++ S APEPA YETAYVTSHK CRAGAFSSDG LCATGS DASIK+LDV+RMLAKSN E + E GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TITDAE + S++F+PTGDFLL GC P+VRLYD NT QCFV S+ H E+ VKWS DGKLYVS S+DG+ KIWDG+SS+V+ TF AHDGAEVCSA FTRNGKY+L+SGKDSL KLWELST+RCLIAYTGAG TG+QE+RAQAVFNHT+D+VMFPDEATTSLCCWDSRNA+RK LLSLGHNG VR+IVHS +SPAFLT SDDFRARFW+KR Sbjct: 13 PEFTLGGNVLKNREALYRLMISQLFYDGHQQVALQLSGIVGTEPACPPSERLHKVVTLGMEKERNALAASKAAASAPNNTNGMSLYSLDLEFDTEMRSEAPEPALYETAYVTSHKSFCRAGAFSSDGQLCATGSADASIKVLDVDRMLAKSNNEIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTITDAEKIQSLSFNPTGDFLLAGCEHPVVRLYDVNTSQCFVSSISQQRHNAEVTVVKWSNDGKLYVSTSLDGTFKIWDGVSSKVVNTFEQAHDGAEVCSAYFTRNGKYILTSGKDSLIKLWELSTSRCLIAYTGAGTTGRQEHRAQAVFNHTDDYVMFPDEATTSLCCWDSRNASRKTLLSLGHNGAVRNIVHSTVSPAFLTSSDDFRARFWFKR 440
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|780628358|ref|XP_011684871.1| (PREDICTED: cleavage stimulation factor subunit 1 [Wasmannia auropunctata]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 302/431 (70.07%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|970898967|ref|XP_015115117.1| (PREDICTED: cleavage stimulation factor subunit 1 [Diachasma alloeum]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 302/434 (69.59%), Postives = 351/434 (80.88%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRNE---------------VLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IKNRE+LYRLMISQLFYDGHQ IAVQL N IQ EP CPPS++L HL+ LG + D + +NE LGPGLDLE++T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P++RLYD NT QCFV S+P+H H I SVK+SPD K Y SA DGSIK+WDG+S++ I TF AHD EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFWY+R Sbjct: 11 PEIDPKNVIKNRETLYRLMISQLFYDGHQTIAVQLSNLIQAEPPCPPSDRLLHLMLLGTAHEPD-RAKKNEGSNANHTPSFSSFDNTLGPGLDLEYETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMT-PGDQAGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVIRLYDINTAQCFVCSIPNHQHTAGITSVKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDSYEVCSVAFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWYRR 442 The following BLAST results are available for this feature:
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold403_size186359:168922..170880+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold403_size186359-processed-gene-0.17 ID=snap_masked-scaffold403_size186359-processed-gene-0.17|Name=cleavage stimulation factor 50 kda subunit|organism=Tigriopus kingsejongensis|type=gene|length=1959bp|location=Sequence derived from alignment at scaffold403_size186359:168922..170880+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cleavage stimulation factor 50 kda subunit' has the following synonyms
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