cleavage stimulation factor 50 kda subunit, snap_masked-scaffold403_size186359-processed-gene-0.17 (gene) Tigriopus kingsejongensis

Overview


Name	cleavage stimulation factor 50 kda subunit
Unique Name	snap_masked-scaffold403_size186359-processed-gene-0.17
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000005728 (supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-1 gene:EMLSAG00000005728 transcript:EMLSAT00000005728 description:"augustus_masked-LSalAtl2s309-processed-gene-7.10")

HSP 1 Score: 481.485 bits (1238), Expect = 1.177e-168
Identity = 234/354 (66.10%), Postives = 281/354 (79.38%), Query Frame = 0

Query:  120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------IKNSRNEVLGP--GLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQ 464
            PEF I GN++KNR++LYRL+ISQLFYDG+QQ+A+QL   +  +P CPPSE+L  +V+LG+E++ +      +  + N + G   GLDLEFDT++   APEPA YET Y  SHK  CRAGAFS+DG LCATGS DASIK+LDV+RMLAKSN +   +   E  GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TI DAEPV S++FHP+GDFLLVGC  P+VRLYD NT QCFV S+P   H  E+  VK+S DGK+Y S+S DGSIKIWDG+SS+VI TF  AHDGAEVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAGATG+Q
Sbjct:   15 PEFTIGGNVLKNRDALYRLIISQLFYDGYQQVALQLSGIVGADPPCPPSERLHKVVSLGLEKERNAIXAXKVSAASNGLGGDLYGLDLEFDTEMRXEAPEPALYETXYXXSHKAFCRAGAFSNDGQLCATGSADASIKVLDVDRMLAKSNNDIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTIIDAEPVQSLSFHPSGDFLLVGCEHPVVRLYDVNTSQCFVSSIPHQRHTSEVTMVKFSNDGKIYASSSTDGSIKIWDGVSSKVINTFDEAHDGAEVCSVYFTRNGKYILSSGKDSLIKLWELSTSRCLIAYTGAGATGRQ 366

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40")

HSP 1 Score: 93.2041 bits (230), Expect = 1.110e-20
Identity = 69/250 (27.60%), Postives = 116/250 (46.40%), Query Frame = 0

Query:  210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGH--PVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
             P Y     +  H     A  FS +G   A+ S D  IK+                      G +     +T+  H   ++ + +     +L S S D T+K+++ S     K +K  ++   V    F+P  + ++ G     VR++D  TG+C + ++P+H     + +V ++ DG L VS+S DG  +IWD  S Q + T  + +D   V   +F+ NGKY+L++  D+  KLWE S  +CL  Y+G
Sbjct:   17 RPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKV---------------------WGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNY--VFCCNFNPQSNLVVSGSFDESVRIWDVRTGKC-LKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLID-NDNPPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSG 239

HSP 2 Score: 88.1965 bits (217), Expect = 5.129e-19
Identity = 58/241 (24.07%), Postives = 118/241 (48.96%), Query Frame = 0

Query:  219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTI-TDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRN-GKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            ++ HK      A+SSD  L  + S D ++KI                    E      ++TL  H + V   +F+P+  ++ SGS D +V+++D       K +KT+   ++PV+++ F+  G  ++   +    R++DT +GQC    + + +    +  VK+SP+GK  ++A++D ++K+W+    + + T++   +      A F+   GK+++S  +D++  +W L T   +    G
Sbjct:   68 ISGHKLGISDVAWSSDSRLLVSASDDKTLKIW-------------------ELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWD---VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDN--PPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQG 284

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006156 (supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-1 gene:EMLSAG00000006156 transcript:EMLSAT00000006156 description:"augustus_masked-LSalAtl2s336-processed-gene-4.9")

HSP 1 Score: 72.4034 bits (176), Expect = 1.027e-13
Identity = 73/274 (26.64%), Postives = 121/274 (44.16%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHP---------KEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAE----PVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPD-EATTSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            IRTL  H   + ++ F+P         K+P +AS S+D +VKL++       ++ + I D E     V+  A+HP+G FL    +    RL+D    Q     +    H + +  + +  DG L ++  +D   +IWD  + Q I        G  +    ++R+G +  +   D+ CK+W+L   +  I YT    T    N    VF+  ED+++    + T  L  W  +  T + L SL GH+  +     SP      TCS D   + W
Sbjct:  239 IRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNL------ESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQ---EVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKG--IIGVDWSRDGYHCATGSSDNACKIWDLRKRK--IEYTIPAHTNVVSN---VVFD--EDYLLTASYDGTAKL--WARK--TWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14")

HSP 1 Score: 70.4774 bits (171), Expect = 2.009e-13
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGC-HQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC 421
            I++ Y H +EV ++ + P+   LASGS D T+K++   K S    +K  + A  + +I +        +P  D +LV   +   VRL+D   G C         HQ  + SV +SPDGK   S S D  + IW  ++ +++  +       EVC
Sbjct:  191 IKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKA--IYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLT---RHQETVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVC 339

HSP 2 Score: 51.6026 bits (122), Expect = 2.508e-7
Identity = 63/265 (23.77%), Postives = 106/265 (40.00%), Query Frame = 0

Query:  231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEH---LSNPNHEQGGHPVI-----RT--LYD------------HMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHH---HQREILSVKWS--------PDGKL-YVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGA 460
            ++S G+L ATG  D   +I      L K+  +H   +      + G+ ++     RT  ++D            H   +  +D+   E   AS S+D   K     K   +K +K+       V SI + P G FL  G +   ++++      C       H    H + I ++KWS        P+  L  VSAS D ++++WD      + T     +   V S  F+ +GK++ S   D    +W     + +  Y G GA
Sbjct:   82 WNSSGSLLATGFYDGIARIWSTTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDES-FASCSKD---KCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVW------CMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQE--TVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGA 334

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0")

HSP 1 Score: 70.8626 bits (172), Expect = 2.143e-13
Identity = 52/204 (25.49%), Postives = 87/204 (42.65%), Query Frame = 0

Query:  278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQC---FVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQF---------------------TRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            RTL  H D V  + F     +L S S D ++K++DF      K ++       V+S+ F P GD++L       +++++T TG C   + G      H+  + +V+   DG L  S S D S+++W   S++        HD    C +                        R G ++ S  +D   K+W++ST + L  Y G
Sbjct:  116 RTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWDFQTYECLKTLQG--HDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTYTG------HREWVRNVRVLHDGSLLASCSNDQSVRVW-STSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVG 310

HSP 2 Score: 68.5514 bits (166), Expect = 1.241e-12
Identity = 64/244 (26.23%), Postives = 103/244 (42.21%), Query Frame = 0

Query:  231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPD----------------------GKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRC 451
            F S G L  + S D SIKI D +                    +  ++TL  H   V+++ F P    + S SRD T+K+++   T+    ++T T   E V ++     G  L    +   VR++ T+T  C    +  H H  E +S  W+P+                      G    S S D +IK+WD  + QV+ T+   HD   V    +   GKY+LS+  D   ++W+++  RC
Sbjct:  130 FDSPGKLLVSCSADMSIKIWDFQ-------------------TYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWE---TATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDC-KDELRDHDHVVECIS--WAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYV-GHDNW-VRGLVWHPGGKYLLSASDDKTIRVWDIAHKRC 346

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42")

HSP 1 Score: 69.3218 bits (168), Expect = 3.744e-13
Identity = 43/153 (28.10%), Postives = 82/153 (53.59%), Query Frame = 0

Query:  287 VTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDS 439
            + ++ + P    +ASG+ D  + +F  S  + K+       A P+ S+AF      LL G     ++LY+ + G   +G++  H     +LSV++SPD + +VS S D S+K+W+  + Q + TF +  D  +V +A ++ NG+ + +  +D+
Sbjct:  154 ILSIAYSPDGKYIASGATDGIINIF--SMPTGKQXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGS-LIGTLSGH--TSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFTDHSD--QVWAASYSPNGRKIATVSEDA 299

HSP 2 Score: 52.7582 bits (125), Expect = 8.082e-8
Identity = 42/165 (25.45%), Postives = 75/165 (45.45%), Query Frame = 0

Query:  292 FHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYT 456
            F P    L SG+    V ++   +T   K     T  + + SIA+ P G ++  G    I+ ++   TG+          H   I S+ +S D K  ++ S DG +K+++     +I T +     + V S QF+ + +  +S   D   K+WE +T +C+  +T
Sbjct:  116 FSPDSETLISGANAGKVNIY-CVETGQNKQQLLDTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGK---QXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTLSG--HTSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFT 274

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000000276 (supercontig:LSalAtl2s:LSalAtl2s1041:88294:89557:1 gene:EMLSAG00000000276 transcript:EMLSAT00000000276 description:"augustus_masked-LSalAtl2s1041-processed-gene-0.10")

HSP 1 Score: 67.781 bits (164), Expect = 1.166e-12
Identity = 49/187 (26.20%), Postives = 89/187 (47.59%), Query Frame = 0

Query:  266 NPNHEQGGHPVIRTLYDHMDEVTALDFHPK-EPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSV-----KWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWEL 446
            N + EQ    ++  L  H  +++ + +HP  +  + + S D TV+++    +   K ++ I D  PVT ++ H TGD++L           D  +G+                SV     ++ PDG ++ + + D  IKIWD    Q +A F   H+G+ + +  F+ NG Y+ ++  D+  KLW+L
Sbjct:   48 NKDTEQ----IVANLKGHSKKISRVIYHPSSDDTVITASHDTTVRVWHVPSSQTLKILR-IHDG-PVTGLSLHATGDYILSTSTDRYWAFTDLRSGRLITKVTADSSAGGASSSVALTCAQFHPDGLIFGTGTSDSEIKIWDLKEQQNVANFP-GHNGS-ITALSFSENGYYLATAADDACVKLWDL 226

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000007279 (supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-1 gene:EMLSAG00000007279 transcript:EMLSAT00000007279 description:"augustus_masked-LSalAtl2s409-processed-gene-1.3")

HSP 1 Score: 68.1662 bits (165), Expect = 3.244e-12
Identity = 49/200 (24.50%), Postives = 93/200 (46.50%), Query Frame = 0

Query:  279 TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFH----------PTGDFLLVGCHQPIVRLY-----DTNTGQCFVGSVPSHH---HQREILSVKWSPDGKLYVSASMDGSIKIWDGISS-QVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAG 459
            TL  H D V AL FHPKEP+L + S D T+K+++  KT+  K   T  D EPV +   H            GD +  G     +R++     D +    +  SV +     H   +  + ++   +  +S S DG++K+W  ++   ++ TF + ++G          +  Y++++  ++ C ++++ T + +I     G
Sbjct:  395 TLRSHYDGVRALRFHPKEPVLITASEDQTLKMWNLQKTTPVKK-STAFDVEPVYTFRAHRGPVLSLDVSRAGDLIFSGGIDASIRVWNMPSPDIDPYNLYDPSVLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQG 593

HSP 2 Score: 54.6842 bits (130), Expect = 4.354e-8
Identity = 59/251 (23.51%), Postives = 105/251 (41.83%), Query Frame = 0

Query:  210 EPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIE--HLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFD-FSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            EP Y   A    H+G   +   S  G L  +G +DASI++ +    +   +I+  +L +P+       +  +L+ H D V  L ++  +  L S S D TVKL+   +K    +   +  +  P +    +    +++         +YD  TG+  +      +    I  V   P   + V+A  D  I+ +D  + ++  +   AH  A V S     NG Y++S   D   +LW + T  C+   T 
Sbjct:  444 EPVYTFRA----HRGPVLSLDVSRAGDLIFSGGIDASIRVWN----MPSPDIDPYNLYDPS------VLASSLFGHSDAVWGLAYNNLKQQLLSCSADGTVKLWSPLAKVPLLRTFGSENNGTPTSVDWMYEDPSYMITAYSNAACIIYDVETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFDNYTGKLTHSMV-AHLEA-VTSIAIDANGLYLISGSHDRSVRLWNIETKTCVQEITA 678

HSP 3 Score: 51.2174 bits (121), Expect = 6.259e-7
Identity = 37/134 (27.61%), Postives = 59/134 (44.03%), Query Frame = 0

Query:  271 QGGHPVIR--TLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQ--REILSVKWSPDGKLYVSASMDGSIKIW 400
            + G PVI+  T  + +  +T +  HP  P+  +   D  ++ FD    + K     +   E VTSIA    G +L+ G H   VRL++  T  C V  + +H  +    I  V + P      SA  D   K++
Sbjct:  581 ETGKPVIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFD--NYTGKLTHSMVAHLEAVTSIAIDANGLYLISGSHDRSVRLWNIETKTC-VQEITAHRKKFDESIFDVAFHPSSSYIASAGADALAKVF 711

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000008384 (supercontig:LSalAtl2s:LSalAtl2s512:319189:321924:1 gene:EMLSAG00000008384 transcript:EMLSAT00000008384 description:"maker-LSalAtl2s512-augustus-gene-3.19")

HSP 1 Score: 65.4698 bits (158), Expect = 8.116e-12
Identity = 58/228 (25.44%), Postives = 101/228 (44.30%), Query Frame = 0

Query:  222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEP----VTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWE 445
            H+G  R+  F+SDG+   + S D SIK+  VE+                      I++   H + V +  +   +  +AS S D ++KLFD    +  K + +    EP       ++FHP+G  + +G     V++YD  T +          H   +  V + P G   +S S DG +K++D I +Q +       +  EV + +F+  G+Y  S G D+   +W+
Sbjct:   29 HQGPVRSVDFNSDGSKXLSASDDKSIKLWTVEK-------------------QRFIKSFNGHNNWVRSAKWSXBQKXIASVSDDRSLKLFD---ENTGKEIHSFN--EPGRGFGQCLSFHPSGSCIAIGTSDKKVKMYDIRTMKLHQSYTS---HTGPVNQVAFHPSGCYLLSCSSDGFVKMFDIIEAQPVYGLTGHKE--EVTAIEFSPKGEYFSSGGSDNAVFVWK 227

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BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000011537 (supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1 gene:EMLSAG00000011537 transcript:EMLSAT00000011537 description:"maker-LSalAtl2s799-snap-gene-3.77")

HSP 1 Score: 65.4698 bits (158), Expect = 1.321e-11
Identity = 46/171 (26.90%), Postives = 78/171 (45.61%), Query Frame = 0

Query:  277 IRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF--------HPTGDFLLVGCH-QPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKD 438
            I++ Y H +EV A+ + P+   LAS S D T+K++   K S    ++    ++ + +I +        +P  D +L        VRL+D   G C         H+  + SV +SPDGK   S S D  + IW  ++ +++ ++       EVC   +   G  V +S  D
Sbjct:  309 IKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQA--HSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGSCLHXLX---RHKEPVYSVAFSPDGKFLASGSFDKCVHIWSTVTGKLVHSYKGTGGIFEVC---WNSRGDKVGASASD 471

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|161789044|sp|Q7RY30.2|LIS11_NEUCR (RecName: Full=Nuclear distribution protein nudF-2; AltName: Full=Lissencephaly-1 homolog 1; Short=LIS-1 1; AltName: Full=Nuclear migration protein 1; AltName: Full=nudF homolog 2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.002e-19
Identity = 94/333 (28.23%), Postives = 147/333 (44.14%), Query Frame = 0

Query:  240 TGSVDASIKILDVERM--LAKSNIEHLSNPNHEQGGHPVI--------RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAF-HPTGDFLLVGCHQPI-VRLYDTNTGQCFVGSVPSHHHQREILSVKWSP-DGKLYVSASMDGSIKIWDGISSQVIATF-ANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTR----------------CLI----AYTGAGATG---KQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535
            T  V    KI+D+E    + +S +++ + P   Q   PV          TL  H D +T + FHP    LASGS D T+K++D+     ++ +K  T A  V  + +  P G+ LL  C   + ++L+D       + ++P H H   + +V++ P  G L VSAS D +++IWD  +   + T   +A    +VC +    +GKY+LS+  D   +LW+++ T                 C I    AY    A     K    + A F       M       S+  WD+R    K L  +GH+  VR +V  P     L+ SDD   R W
Sbjct:   61 TSVVRLQKKIMDLESRNHILQSELDN-ATPTSRQNKDPVAWLPRAPPRHTLQSHRDPITCVAFHPVFSSLASGSEDQTIKIWDWELGELERTIKGHTKA--VLDVDYGGPRGNTLLASCSSDLTIKLWDPLDSYKNIRTLPGHDHS--VSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSL---DGKYILSTSDDYTSRLWDVTITNPEPKVTLIGHEHVVLCCAIAPPAAYQNLAAMAGIKKPPATSSAEF-------MATGSRDKSIRLWDARGTCIKTL--VGHDNWVRGLVFHPGGKYLLSVSDDKTLRCW 376

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|212288547|sp|A8X8C6.1|TG125_CAEBR (RecName: Full=WD repeat-containing protein tag-125)

HSP 1 Score: 93.2041 bits (230), Expect = 2.174e-19
Identity = 71/271 (26.20%), Postives = 115/271 (42.44%), Query Frame = 0

Query:  202 TDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVF 472
            T   S+ P   Y   + +  H  +  A  FS  G    T S D ++KI ++  +  +                   RTL  H   V    +      + + S D T+K+++       K +K  T+   V    F+P    ++ G     VR++D  TG C V ++P+H     + +V ++ DG L  S S DG ++IWD  + Q + T  +  +   V   +F+ NGKY+LSS  D+  KLW+    + L  Y G       EN    +F
Sbjct:   58 TSQESTIPGAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCE-------------------RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNY--VFCCNFNPQSSLVVSGSFDESVRIWDVRTGMC-VKTLPAHSD--PVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD-DENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQG------HENNKYCIF 297

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|3123176|sp|Q93847.1|WDR52_CAEEL (RecName: Full=WD repeat-containing protein wdr-5.2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.674e-19
Identity = 70/272 (25.74%), Postives = 125/272 (45.96%), Query Frame = 0

Query:  211 PAYYETAYV-TSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNH----------------------EQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC-SAQFT-RNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            P Y   A +  +HK +     FS DG    +GS D SIKI  ++ +  K+ + H    N                       +      ++TL  H + V    F+P   ++ASGS D T+++  +   +           +PV+S+ F+  G +L  G +  IVR++D+ TG C    +   H    I  VK+SP+GK  ++++++ ++K+WD    +V+  +   H+ ++ C +A F+   GK+++S  +D    +W L T   L    G
Sbjct:   94 PTYKLVAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRI--WCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEH--PPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEY-TGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLDG 360

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|81917086|sp|Q9D7H2.1|WDR5B_MOUSE (RecName: Full=WD repeat-containing protein 5B)

HSP 1 Score: 92.0485 bits (227), Expect = 3.418e-19
Identity = 58/180 (32.22%), Postives = 91/180 (50.56%), Query Frame = 0

Query:  278 RTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457
            +TLY H  E++ + +      L S S D T+K++D       K +K  +D   V    F+P  + ++ G     V++++  TG+C         H   I +V ++ +G L VS S DG  +IWD  S Q + T A+      V   +F+ NGKY+L++  D+  KLW+ S  RCL  YTG
Sbjct:   75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDF--VFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLK---TLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLAD-EGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248

HSP 2 Score: 89.3521 bits (220), Expect = 2.933e-18
Identity = 59/241 (24.48%), Postives = 117/241 (48.55%), Query Frame = 0

Query:  221 SHKGNCRAG-----------AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNG-KYVLSSGKDSLCKLWELST 448
            ++ GNC+             A+SSD +   + S D ++K+ D+                        ++TL  H D V   DF+P   ++ SGS D +VK+++       K +KT++  ++P++++ F+  G  ++ G +  + R++D  +GQC      +      +  VK+SP+GK  ++A++D ++K+WD    + + T+    +      A F+  G K+V+S  +D++  +W L T
Sbjct:   68 AYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMR-------------------SGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE---VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCL--RTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQT 284

HSP 3 Score: 63.1586 bits (152), Expect = 1.369e-9
Identity = 49/217 (22.58%), Postives = 97/217 (44.70%), Query Frame = 0

Query:  231 FSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDA--EPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDG-KLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLW 444
            F+    L  +GS D S+KI +V+                       ++TL  H D ++A++F+    ++ SGS D   +++D    ++ + ++T+ D    PV+ + F P G ++L       ++L+D + G+C + +   H +++  L   +S  G K  VS S D  + IW+  + +++       D     +   T+N     +   D   K+W
Sbjct:  131 FNPPSNLIVSGSFDESVKIWEVKT-------------------GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD---AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324

HSP 4 Score: 60.077 bits (144), Expect = 1.402e-8
Identity = 52/210 (24.76%), Postives = 84/210 (40.00%), Query Frame = 0

Query:  331 VTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLC-CWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW-YKR 538
            ++S+ F P G++L       ++ ++    G C       + H  EI  V WS D    VSAS D ++K+WD  S + + T     D    C   F      ++S   D   K+WE+ T +CL        T    +   +  N   +  +    +   LC  WD+ +    + L+   N  V  +  SP     LT + D   + W Y R
Sbjct:   42 ISSVKFSPNGEWLASSAADALIIIWGAYDGNC---KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCC--DFNPPSNLIVSGSFDESVKIWEVKTGKCL-------KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR 239

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|426021072|sp|D3ZW91.1|POC1B_RAT (RecName: Full=POC1 centriolar protein homolog B; AltName: Full=WD repeat-containing protein 51B)

HSP 1 Score: 93.9745 bits (232), Expect = 3.487e-19
Identity = 73/250 (29.20%), Postives = 110/250 (44.00%), Query Frame = 0

Query:  206 SSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAY 455
            +S PE    E  Y   HK    +  FS +    AT S D  + +  ++                    H        H D VT+L F P+  +LAS SRD TV+L+   +       K  T   PV S+ F   G FL+       ++++ +   Q F+ S+  H H   +   K+SPDG+L VS S D +IKIWD  S Q +  F+++   A      F+ NG  + S+G D   ++W++   R L  Y
Sbjct:    2 ASGPEDPILER-YFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLK-------------------PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHT--APVRSVDFSADGQFLVTASEDKSIKVW-SMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF--VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY 224

HSP 2 Score: 67.781 bits (164), Expect = 7.776e-11
Identity = 58/231 (25.11%), Postives = 99/231 (42.86%), Query Frame = 0

Query:  221 SHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTS-IAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQRE---ILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELS 447
            +H    R+  FS+DG    T S D SIK+  + R                      + +LY H   V    F P   ++ S S D T+K++D   T++K+ +   +D+    + + F P G  +        VR++D    +         H+Q     +  + + P G   V+AS DG++KI D +  ++I T    H G  V +  F+++G+   S G D+   +W  S
Sbjct:  100 AHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR-------------------QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD---TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLL------QHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL-QGHTGP-VFTVSFSKDGELFTSGGADAQVLVWRTS 300

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|795053941|ref|XP_011871011.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X2 [Vollenhovia emeryi])

HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+SS+ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNMIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRAKKDSSANLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIT-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|815799842|ref|XP_012220564.1| (PREDICTED: cleavage stimulation factor subunit 1 [Linepithema humile])

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 304/431 (70.53%), Postives = 352/431 (81.67%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRNEV----------LGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   E D   K++ N +          LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+SS+ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEVDPKNIIKSREQLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDTSNSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|751218509|ref|XP_011162294.1| (PREDICTED: cleavage stimulation factor subunit 1 [Solenopsis invicta])

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDNSTSISTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|951565066|ref|XP_014481393.1| (PREDICTED: cleavage stimulation factor subunit 1 [Dinoponera quadriceps])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 305/437 (69.79%), Postives = 352/437 (80.55%), Query Frame = 0

Query:  113 GGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRN---------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            G N    PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G   E D   K S N           LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    3 GQNATKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGAAHEPDRSKKESNNVSTFASSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 438

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|826453264|ref|XP_012532678.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X1 [Monomorium pharaonis])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + PIVRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNVIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPIVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|769832588|ref|XP_011643192.1| (PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1 [Pogonomyrmex barbatus])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 306/449 (68.15%), Postives = 357/449 (79.51%), Query Frame = 0

Query:  102 PAGTQANATTLGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            P+   AN +T+       PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+S NA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:   48 PSKNTANQSTM-----KEPEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSSNLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSXNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 490

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|1153833364|ref|XP_020293282.1| (cleavage stimulation factor subunit 1 isoform X1 [Pseudomyrmex gracilis])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 300/438 (68.49%), Postives = 351/438 (80.14%), Query Frame = 0

Query:  112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRN-----------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            +  N    PE  P NIIK+RE+LYRLMISQLFYDGHQ +A+QL N IQ EP CPPS++L HL+ +G   + D     N             LGPGLDLEF+T++ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + +  P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGD+L+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ I TF  AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    1 MSNNATKEPEVDPKNIIKSRETLYRLMISQLFYDGHQTLAMQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKENTSLSTFASSFDNTLGPGLDLEFETEIQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEVP-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDYLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHSNGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 437

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|225719552|gb|ACO15622.1| (Cleavage stimulation factor 50 kDa subunit [Caligus clemensi])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 303/430 (70.47%), Postives = 351/430 (81.63%), Query Frame = 0

Query:  120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIK----------NSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PEF + GN++KNRE+LYRLMISQLFYDGHQQ+A+QL   +  EPACPPSE+L  +V LGME++ +            N+ N +    LDLEFDT++ S APEPA YETAYVTSHK  CRAGAFSSDG LCATGS DASIK+LDV+RMLAKSN E   +   E  GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TITDAE + S++F+PTGDFLL GC  P+VRLYD NT QCFV S+    H  E+  VKWS DGKLYVS S+DG+ KIWDG+SS+V+ TF  AHDGAEVCSA FTRNGKY+L+SGKDSL KLWELST+RCLIAYTGAG TG+QE+RAQAVFNHT+D+VMFPDEATTSLCCWDSRNA+RK LLSLGHNG VR+IVHS +SPAFLT SDDFRARFW+KR
Sbjct:   13 PEFTLGGNVLKNREALYRLMISQLFYDGHQQVALQLSGIVGTEPACPPSERLHKVVTLGMEKERNALAASKAAASAPNNTNGMSLYSLDLEFDTEMRSEAPEPALYETAYVTSHKSFCRAGAFSSDGQLCATGSADASIKVLDVDRMLAKSNNEIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTITDAEKIQSLSFNPTGDFLLAGCEHPVVRLYDVNTSQCFVSSISQQRHNAEVTVVKWSNDGKLYVSTSLDGTFKIWDGVSSKVVNTFEQAHDGAEVCSAYFTRNGKYILTSGKDSLIKLWELSTSRCLIAYTGAGTTGRQEHRAQAVFNHTDDYVMFPDEATTSLCCWDSRNASRKTLLSLGHNGAVRNIVHSTVSPAFLTSSDDFRARFWFKR 440

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|780628358|ref|XP_011684871.1| (PREDICTED: cleavage stimulation factor subunit 1 [Wasmannia auropunctata])

HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0
Identity = 302/431 (70.07%), Postives = 351/431 (81.44%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G   + D              +S +  LGPGLDLEF+T+  + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS  E ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H   I S+K+SPD K Y SA  DGSIK+WDG+S++ + TFA AHDG EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R
Sbjct:    4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433

[Close]

BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|970898967|ref|XP_015115117.1| (PREDICTED: cleavage stimulation factor subunit 1 [Diachasma alloeum])

HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0
Identity = 302/434 (69.59%), Postives = 351/434 (80.88%), Query Frame = 0

Query:  120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRNE---------------VLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538
            PE  P N+IKNRE+LYRLMISQLFYDGHQ IAVQL N IQ EP CPPS++L HL+ LG   + D +  +NE                LGPGLDLE++T+  + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS  + ++ P  + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ +  ++FHPTGDFL+VG + P++RLYD NT QCFV S+P+H H   I SVK+SPD K Y SA  DGSIK+WDG+S++ I TF  AHD  EVCS  FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFWY+R
Sbjct:   11 PEIDPKNVIKNRETLYRLMISQLFYDGHQTIAVQLSNLIQAEPPCPPSDRLLHLMLLGTAHEPD-RAKKNEGSNANHTPSFSSFDNTLGPGLDLEYETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMT-PGDQAGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVIRLYDINTAQCFVCSIPNHQHTAGITSVKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDSYEVCSVAFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWYRR 442

The following BLAST results are available for this feature:

BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
BLAST of cleavage stimulation factor 50 kda subunit vs. nr

BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000005728	1.177e-168	66.10	supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-...	[more]
EMLSAG00000001111	1.110e-20	27.60	supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:...	[more]
EMLSAG00000006156	1.027e-13	26.64	supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-...	[more]
EMLSAG00000009105	2.009e-13	29.87	supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1...	[more]
EMLSAG00000003976	2.143e-13	25.49	supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 ...	[more]
EMLSAG00000006041	3.744e-13	28.10	supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1...	[more]
EMLSAG00000000276	1.166e-12	26.20	supercontig:LSalAtl2s:LSalAtl2s1041:88294:89557:1 ...	[more]
EMLSAG00000007279	3.244e-12	24.50	supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-...	[more]
EMLSAG00000008384	8.116e-12	25.44	supercontig:LSalAtl2s:LSalAtl2s512:319189:321924:1...	[more]
EMLSAG00000011537	1.321e-11	26.90	supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1...	[more]

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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|161789044\|sp\|Q7RY30.2\|LIS11_NEUCR	2.002e-19	28.23	RecName: Full=Nuclear distribution protein nudF-2;...	[more]
gi\|212288547\|sp\|A8X8C6.1\|TG125_CAEBR	2.174e-19	26.20	RecName: Full=WD repeat-containing protein tag-125	[more]
gi\|3123176\|sp\|Q93847.1\|WDR52_CAEEL	2.674e-19	25.74	RecName: Full=WD repeat-containing protein wdr-5.2	[more]
gi\|81917086\|sp\|Q9D7H2.1\|WDR5B_MOUSE	3.418e-19	32.22	RecName: Full=WD repeat-containing protein 5B	[more]
gi\|426021072\|sp\|D3ZW91.1\|POC1B_RAT	3.487e-19	29.20	RecName: Full=POC1 centriolar protein homolog B; A...	[more]

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BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|795053941\|ref\|XP_011871011.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 i...	[more]
gi\|815799842\|ref\|XP_012220564.1\|	0.000e+0	70.53	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|751218509\|ref\|XP_011162294.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|951565066\|ref\|XP_014481393.1\|	0.000e+0	69.79	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|826453264\|ref\|XP_012532678.1\|	0.000e+0	70.30	PREDICTED: cleavage stimulation factor subunit 1 i...	[more]
gi\|769832588\|ref\|XP_011643192.1\|	0.000e+0	68.15	PREDICTED: LOW QUALITY PROTEIN: cleavage stimulati...	[more]
gi\|1153833364\|ref\|XP_020293282.1\|	0.000e+0	68.49	cleavage stimulation factor subunit 1 isoform X1 [...	[more]
gi\|225719552\|gb\|ACO15622.1\|	0.000e+0	70.47	Cleavage stimulation factor 50 kDa subunit [Caligu...	[more]
gi\|780628358\|ref\|XP_011684871.1\|	0.000e+0	70.07	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]
gi\|970898967\|ref\|XP_015115117.1\|	0.000e+0	69.59	PREDICTED: cleavage stimulation factor subunit 1 [...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold403_size186359	supercontig	scaffold403_size186359:168922..170880 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold403_size186359-processed-gene-0.17-mRNA-1	snap_masked-scaffold403_size186359-processed-gene-0.17-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold403_size186359:168922..170880+

gene from alignment at scaffold403_size186359:168922..170880+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold403_size186359-processed-gene-0.17 ID=snap_masked-scaffold403_size186359-processed-gene-0.17|Name=cleavage stimulation factor 50 kda subunit|organism=Tigriopus kingsejongensis|type=gene|length=1959bp|location=Sequence derived from alignment at scaffold403_size186359:168922..170880+ (Tigriopus kingsejongensis)
GGTTGCGCGAGTCCAATCAATGTCATGGGTTGCGAATCTGGACTGGGACC
AATGTTGATGTACGAGAAGTTGTCCTCTTGACCACGGATCGACAACGTAA
ATTCTGTGCCTGGAGCCCTGGACCCTCAGCCGGAGGTGTACTACCCGAGA
TGAACCACCCCAATGCCAATTTCGGGGGCGGTAGTGGGTCTAGACCCATG
TTGGGGTACGTATGGGGGTCAATCCTGGTCAGGCCGGGTCAGGTTCACGC
TCGTGGGGTGACTTTCCAGGAGTGGCGGGGGCTTCAACGCCCCTTTCGAG
GGCCCTCGAGGTGGATTCGGTGGAGCCGGACCATTCGGTGGTGGAGGTGG
CCTGAGCGCCAAATTTCCACCTGCGGGTACGCAAGCGAATGCCACCACGT
TGGGAGGCAATCGAGACGCCGCTCCCGAATTCATTCCGGGCAATATCATC
AAGAATCGAGAGAGCCTCTACCGACTCATGATCAGCCAGCTCTTCTACGA
CGGTCACCAGCAGATTGCCGTTCAGCTTCAGAACGCCATTCAGCCTGAGC
CGGCTTGCCCCCCGTCCGAGAAGCTCTTTCATCTCGTCAATCTGGGCATG
GAGCGGGACACAGACATCAAGAACTCTCGCAACGAGGTACTGGGCCCGGG
CCTGGACCTCGAGTTCGACACTGATCTGCCCAGCTCGGCCCCCGAGCCCG
CTTACTACGAGACGGCCTACGTGACCAGCCACAAGGGCAATTGTCGGGCT
GGAGCCTTTTCCTCGGACGGTACGCTCTGTGCCACGGGCTCGGTGGACGC
CTCCATCAAGATTCTAGACGTGGAGCGGATGCTGGCCAAGTCCAATATCG
AGCACTTGTCCAATCCCAACCACGAGCAGGGAGGTCATCCGGTTATTCGG
ACCCTCTACGACCACATGGACGTAAGACCGGGAGGTGGGCCGCTAATTGT
TTATGAATGGGATTGACCGTGGGCTTTCCCTTCCCCAGGAGGTGACTGCG
CTCGATTTTCATCCAAAGGAACCCATTTTGGCCTCCGGCTCACGTGACTT
CACGGTTAAGCTCTTCGATTTTAGCAAGACTTCGGCGAAAAAGGCCATGA
AGACCATCACCGATGCCGAACCGGTCACTTCAATTGCTTTCCATCCCACG
GGTATGTCGAGTCTTGGGTCGAAATGAGGCTACGGGGTGTTCCAAACGCT
CATGTTTCAGGCGACTTCCTGCTGGTGGGCTGCCATCAGCCCATTGTCAG
GCTCTACGACACGAATACGGGACAATGCTTTGTGGGGAGCGTTCCCAGTC
ACCACCACCAAAGGGAAATCTTGAGCGTCAAGTGGTCCCCCGACGGCAAG
GTAACCGCCTATCTGGGCCTCTTTTCAATGCTTCGCGAGCTTACTCTCCG
TCTTTGCAGCTGTACGTCTCCGCCTCTATGGACGGTTCCATCAAAATATG
GGACGGGATATCGAGCCAAGTGATTGCCACTTTTGCCAATGCCCACGACG
GGGCTGAGGTCTGCTCGGCTCAATTCACCCGGAACGGAAAGTACGTGCTG
TCATCGGGCAAGGATTCATTGTGCAAGCTATGGGAGTTGTCGACCACTCG
ATGTTTGATCGCCTACACTGGAGCGGGAGCCACCGGAAAGCAGGTGAGAC
CCGACCTTCATTGGCCGTCACAGTCACACCCATCTCAATCCATGCGCATT
TTCCAGGAGAATCGAGCCCAAGCTGTCTTCAATCACACGGAGGATTTCGT
GATGTTCCCGGACGAGGCCACCACCTCACTTTGTTGCTGGGACTCTCGTA
ATGCCACGCGGAAACAGCTTCTCTCTCTGGGTCACAACGGTGTGGTTCGA
CATATTGTCCACTCTCCAATCTCGCCGGCATTCCTGACGTGCTCCGATGA
TTTTCGGGCAAGGTTTTGGTACAAACGCCCCATTTCTCAATGAGCGGGGG
CTATGAAAA

Synonyms

The feature 'cleavage stimulation factor 50 kda subunit' has the following synonyms


Synonym
Tk07437

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