cleavage stimulation factor 50 kda subunit, snap_masked-scaffold403_size186359-processed-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000003570 (supercontig:LSalAtl2s:LSalAtl2s1961:13609:15847:-1 gene:EMLSAG00000003570 transcript:EMLSAT00000003570 description:"maker-LSalAtl2s1961-augustus-gene-0.14") HSP 1 Score: 54.299 bits (129), Expect = 6.506e-8 Identity = 47/179 (26.26%), Postives = 80/179 (44.69%), Query Frame = 0 Query: 280 LYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMK-TIT------DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQ--FTRNGKYVLSSGKDSLCKLWELSTT 449 L H D V AL + +AS D ++ L+D + +A A T+T + + + S+A +P G L+ G + +R +D T H + ++ + +G L +S S DG+ K+W + IAT+ +G A FTR V S+G+D L ++ T+ Sbjct: 108 LRTHKDYVKALAYAKDREQVASAGLDKSIYLWDINTLTALTASNNTVTTSSVSGNKDSIYSLAMNPAGTLLVSGSSEKTLRFWDPRTSAKLA---KLKGHTDNVKALILNREGTLCISGSSDGTFKLWSIGEQRCIATYYRHTEGVWALQANESFTR----VYSAGRDKNIILTDIRTS 279
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000008385 (supercontig:LSalAtl2s:LSalAtl2s512:356044:357420:-1 gene:EMLSAG00000008385 transcript:EMLSAT00000008385 description:"snap_masked-LSalAtl2s512-processed-gene-3.12") HSP 1 Score: 52.7582 bits (125), Expect = 8.307e-8 Identity = 43/186 (23.12%), Postives = 80/186 (43.01%), Query Frame = 0 Query: 260 NIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWE 445 NI + N +G V R L H ++ F I+ S S D T +D + K+ V S++ P + G +L+D G C H H+ +I +V + P G + + S D ++K++D S Q +A +++ + V S F+++G+ +++ D +W+ Sbjct: 75 NICSIYNLKSREGSVRVSRELPGHTGYLSCCRFLDDNLIITS-SGDMTCAQWDIE--TGKQTTTYNGHTGDVMSLSLSPDSKTFVSGACDASAKLWDVRDGMC---KQTFHGHESDINAVTFFPQGTAFSTGSDDATVKLYDIRSDQELAQYSHDNIICGVTSVAFSKSGRLLMAGYDDFNVNIWD 254 HSP 2 Score: 50.8322 bits (120), Expect = 2.728e-7 Identity = 37/143 (25.87%), Postives = 59/143 (41.26%), Query Frame = 0 Query: 215 ETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDT 357 +T H G+ + + S D +G+ DAS K+ DV + K +T + H ++ A+ F P+ ++GS D TVKL+D VTS+AF +G L+ G V ++DT Sbjct: 132 QTTTYNGHTGDVMSLSLSPDSKTFVSGACDASAKLWDVRDGMCK-------------------QTFHGHESDINAVTFFPQGTAFSTGSDDATVKLYDIRSDQELAQYSHDNIICGVTSVAFSKSGRLLMAGYDDFNVNIWDT 255
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000006113 (supercontig:LSalAtl2s:LSalAtl2s332:452120:457604:1 gene:EMLSAG00000006113 transcript:EMLSAT00000006113 description:"augustus_masked-LSalAtl2s332-processed-gene-4.0") HSP 1 Score: 53.5286 bits (127), Expect = 1.123e-7 Identity = 66/265 (24.91%), Postives = 112/265 (42.26%), Query Frame = 0 Query: 290 LDFHPKE---PILASGSRDFTVKLFDFSKTSAKKAMKTIT-------DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILS------VKWSPDGK-LYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC-SAQFTR-NGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 + F P+E + SG +DF++ L F+K + K + T++ + V+SI F +F +G +++YD + V H+ E++S + WS K VS+ +GS+ +WD S+ I TF + + C S F R + K V S D+ KLW + I ++ A K N FN + + A + +D RN L GH V ++ S + ++ S D + + W Sbjct: 219 MSFTPEECSSSLDYSGLKDFSLCLNKFTKYNTVKPLATLSYMTDMFNNTSIVSSIDFDKDNEFFAIGGVTKRIKIYDYSV--VLNDLVDIHYPSMEMVSSSKISCISWSSFHKGTLVSSDYEGSVVVWDANSNSKIRTF---QEHEKRCWSVDFNRIDTKLVASGSDDARVKLWSTN-----IHHSVASLEAKA-NVCCVKFNPESCYHLAFGSADHCVHYYDLRNTKNHLNLFKGHKKAVSYVKFLN-SESIVSASTDSQLKLW 471
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000002626 (supercontig:LSalAtl2s:LSalAtl2s152:460087:461246:-1 gene:EMLSAG00000002626 transcript:EMLSAT00000002626 description:"maker-LSalAtl2s152-augustus-gene-4.9") HSP 1 Score: 52.7582 bits (125), Expect = 1.132e-7 Identity = 33/124 (26.61%), Postives = 54/124 (43.55%), Query Frame = 0 Query: 283 HMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHH------HQREILSVKWSPDGKLYVSASMDGSIKIW 400 H ++ A+ +HP + +GS D T +LFD + V +I F +G L G + V ++D S+ +H H+ + S+K SPDG + S D S+K+W Sbjct: 248 HESDINAVKYHPSGDAIGTGSDDATXRLFDLRAXREXTKYTKESILFGVNAIDFSTSGRILFAGYNDYAVNMWD---------SLKTHRIAMLYGHENRVSSLKVSPDGTAIATGSWDYSLKVW 362
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Match: EMLSAG00000004683 (supercontig:LSalAtl2s:LSalAtl2s245:245484:249637:1 gene:EMLSAG00000004683 transcript:EMLSAT00000004683 description:"augustus_masked-LSalAtl2s245-processed-gene-2.4") HSP 1 Score: 52.7582 bits (125), Expect = 1.566e-7 Identity = 48/210 (22.86%), Postives = 92/210 (43.81%), Query Frame = 0 Query: 234 DGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSH---HHQREILSVKWSPDGKLYVSASMDGS----IKIWDGISSQVIATFANAHDG-AEVCSAQFTRNGKYVLSS 435 +G + G+ +A + + D+E +R L H D V++L ++ IL+SGSR + D + + ++ + V +A+ G +L G + + ++D G+C+ P H HQ + +V W P + +V AS G+ IK+W+ + T N+ D ++VC+ ++ K ++SS Sbjct: 235 EGNFLSVGTTNAELHLWDIE-------------------AEKRVRLLTSHTDRVSSLSWNSY--ILSSGSRSGQIHHSDV-RVAQHHIASSLYHTQEVCGLAWSHNGRYLASGANDNTLNIWDAAQGECYSRPDPLHTFTQHQAAVKAVAWCP-WQPHVLASGGGTAXRCIKLWNCNN----GTLLNSIDSKSQVCALLWSSEYKELVSS 417
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|67460105|sp|Q5BJQ6.1|CSTF1_RAT (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50 >gi|67460583|sp|Q99LC2.1|CSTF1_MOUSE RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50) HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0 Identity = 254/420 (60.48%), Postives = 314/420 (74.76%), Query Frame = 0 Query: 128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 +K+R+ LY+L+ISQL YDG+ IA L N I+P+ C PSE+L HL+ LGME D T ++ + R++ + PG +DLEFD D+ + +PE + YET YVTSHKG CR +S DG L ATGS DASIKILD ERMLAKS IE + N +Q HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG P +RLYD NT QCFV P H I SV ++P +YV+ S DG IK+WDG+S++ I TF AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+++ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYILLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|461848|sp|Q05048.1|CSTF1_HUMAN (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50) HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0 Identity = 254/420 (60.48%), Postives = 313/420 (74.52%), Query Frame = 0 Query: 128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 +K+R+ LY+L+ISQL YDG+ IA L N I+P+ C PSE+L HL+ LGME D T ++ + R++ + PG +DLEFD D+ + +PE + YET YVTSHKG CR +S DG L ATGS DASIKILD ERMLAKS IE + N +Q HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG P +RLYD NT QCFV P H I SV ++ +YV+ S DG IK+WDG+S++ I TF AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+V+ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|67460449|sp|Q5R8K2.1|CSTF1_PONAB (RecName: Full=Cleavage stimulation factor subunit 1; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit; Short=CstF-50) HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0 Identity = 254/420 (60.48%), Postives = 313/420 (74.52%), Query Frame = 0 Query: 128 IKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERD-TDIKNS--RNEVLGPG--LDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSN--IEHLSNPNHEQG--GHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 +K+R+ LY+L+ISQL YDG+ IA L N I+P+ C PSE+L HL+ LGME D T ++ + R++ + PG +DLEFD D+ + +PE + YET YVTSHKG CR +S DG L ATGS DASIKILD ERMLAKS IE + N +Q HPVIRTLYDH+DEVT L FHP E ILASGSRD+T+KLFD+SK SAK+A K I +AE + SI+FHP+GDF+LVG P +RLYD NT QCFV P H I SV ++ +YV+ S DG IK+WDG+S++ I TF AHDGAEVCSA F++N KY+LSSGKDS+ KLWE+ST R L+ YTGAG +G+Q +R QAVFNHTED+V+ PDE T SLCCWDSR A R+ LLSLGHN +VR IVHSP +P F+TCSDDFRARFWY+R Sbjct: 8 LKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHADAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRIAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRR 427
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|75329664|sp|Q8L4J2.1|CTF50_ARATH (RecName: Full=Cleavage stimulation factor subunit 50; Short=AtCstF-50; Short=AtCstF50; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit) HSP 1 Score: 268.855 bits (686), Expect = 2.132e-83 Identity = 161/440 (36.59%), Postives = 238/440 (54.09%), Query Frame = 0 Query: 112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNA-IQPEPACPPSEKLFHLVNLGMERDTD-----------IKNSRNEVLGP---GLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGS-VPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 +G + D GNI + L L+++ L + Q+A + +A + P P +L LV G+ + + + +S + P +D + SS P + E+ ++ HK R FS DG ATG D SIK+ +V ++ K I + + P+IRT YDH + + LDFHP+ IL S ++D +K FDFSKT+AK+A K D V SI+FHP+G+FLL G PI LYD NT QCF+ S P I V++S G +Y++AS DG+I+++DG+S++ + + NAH +EV SA FT++ ++VLSSGKDS KLWE+ + R + Y GA + + R+QA+FN TE+FV+ DEA+ + WD+R A + HNG R I HSP+ F+TC D RFW Sbjct: 1 MGNSGDLEQALQDGNIFRQ---LNALIVAHLRHHNLSQVASAVASATMTPLNIEVPPNRLLELVAKGLAAENNGTLRGVSSSVLLPSSYGSITTPRTASIDFSVNHAKGSSKTIPKH-ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKV--KQMI------SGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGA---KRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|20140995|sp|Q8YTC2.1|Y2800_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr2800) HSP 1 Score: 108.227 bits (269), Expect = 2.505e-23 Identity = 85/313 (27.16%), Postives = 131/313 (41.85%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEAT-------TSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 AFS D + A+GS D ++K+ D Q G I +L H D + + F P LAS S D +V+L++ S + + TD V ++ FHP G + G V+L++ +TGQC H +IL + WSPDG+L SAS D S+++WD + + + + V SA F+ NG+ + + D K+W+ +CL TG N D PD ++ WD N + + +GH +V + SP + S D R W Sbjct: 943 AFSPDRQILASGSNDKTVKLWD------------------WQTG-KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDW--VYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK---TLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSN--RVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHT-------------NWVFDIAFSPDGKILASASHDQTVRIWDV-NTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIW 1215 HSP 2 Score: 106.301 bits (264), Expect = 1.030e-22 Identity = 91/318 (28.62%), Postives = 142/318 (44.65%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 +T H+ + AF DG A+ S D +IK+ D+ Q G ++TL H D V + F P LAS + D T+KL+D S+ + +K+ T V S+AF G L G +++++ +TG+C + H + S+ +SPD K+ VS S D +IK+WD + I T + H EVCS F+ +G+ + D +LW T +CL A+ G + A V + ++ ++ WD + T K + SL GH + I SP S + S D R W Sbjct: 722 LTGHEHEVFSVAFHPDGETLASASGDKTIKLWDI------------------QDG-TCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGW--VRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIG---HTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTL-HGHTN-EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYG------NTDWALPVAFSPDRQILASGSNDKTVKLWDWQ--TGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW 1005 HSP 3 Score: 89.3521 bits (220), Expect = 2.874e-17 Identity = 87/328 (26.52%), Postives = 131/328 (39.94%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFV----MFPDEAT-------TSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 +T H R AFS DG A+ + D +IK+ DV QG +RTL H V ++ F LASGS D T+K++++ K I V SIA+ P L+ G ++L+D T C H H E+ SV +SPDG+ S+D S+++W+ + Q + + D A F+ + + + S D KLW+ T + + + G HT DF+ PD T +S+ W+ Q+L L H V +V P T S D + W Sbjct: 764 LTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVS-----------------QG--KCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY--IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIK---TLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWA--LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEG----------------HT-DFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQIL-LEHTDWVYAVVFHPQGKIIATGSADCTVKLW 1047 HSP 4 Score: 83.5741 bits (205), Expect = 1.706e-15 Identity = 66/264 (25.00%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 230 AFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITD-AEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATF--------------------ANAHDGA------------EVC--------SAQFTRNGKYVLSSGKDSLCKLWELSTTRCL 452 AFS D A+ S D+S+++ ++ + L +H D V A+ FHP+ I+A+GS D TVKL++ S + +KT+++ ++ + +A+ P G L VRL+D TG+C VG + H ++ + S +SP+G++ + S D ++KIWD + + T + +HD +C S F+ +G+ V S +D ++W + T CL Sbjct: 985 AFSPDSQTLASASTDSSVRLWNIST-------------------GQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNIS---TGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRC-VGILRGHSNR--VYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223 HSP 5 Score: 61.6178 bits (148), Expect = 1.119e-8 Identity = 42/142 (29.58%), Postives = 65/142 (45.77%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCF 363 H + FS +G + AT S D ++KI D +QG ++TL H + V + F P ILAS S D TV+++D + + K I V+S+AF P G+ + G VR+++ TG+C Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIWD-----------------WQQG--KCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVN--TGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|74996742|sp|Q54KL5.1|WDR5_DICDI (RecName: Full=WD repeat-containing protein 5 homolog) HSP 1 Score: 102.064 bits (253), Expect = 1.435e-22 Identity = 73/255 (28.63%), Postives = 119/255 (46.67%), Query Frame = 0 Query: 207 SAPE-PAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGH--PVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTT-RCLIAYTG 457 S P+ P Y + H + + FS DG A+ S D +IKI G + RTL H + ++ + + ++ S S D T+K++D K +K E V ++F+P + ++ G VR++D NTG+C + H + V ++ DG L VS S DG+++IWD + Q++ T + DG EV +F+ NGK+VL+ D+ +LW + +CL YTG Sbjct: 29 SIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIW---------------------GAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK--GHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGEC---TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS-TEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256 HSP 2 Score: 89.7373 bits (221), Expect = 2.338e-18 Identity = 61/238 (25.63%), Postives = 112/238 (47.06%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVC--SAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG 457 HK A+S D L + S D +IKI DVE +++TL H + V + F+P+ ++ SGS D V+++D + K + +D PVT + F+ G ++ G + VR++DT TGQ + S +E+ VK+SP+GK ++ ++D ++++W +++ H + C S GK++++ +D+L ++ L T + G Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVE-------------------SGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD--PVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL--NTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAG 301
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|75335857|sp|Q9M2Z2.1|WDR5A_ARATH (RecName: Full=COMPASS-like H3K4 histone methylase component WDR5A; Short=AtWDR5A) HSP 1 Score: 99.3673 bits (246), Expect = 9.594e-22 Identity = 82/336 (24.40%), Postives = 147/336 (43.75%), Query Frame = 0 Query: 203 DLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 ++P++A Y + +TSH + FSSDG L A+ S D +I+ + + + ++ P E GH + ++ + F + S S D T+KL+D S K + I + F+P + ++ G VR++D TG+C + +P+H + +V ++ DG L VS+S DG +IWD + + T + + V +F+ NGK++L D+ +LW +S+ + L YTG + + F+ T + + W+ + Q L GH V ++ P + S D R W ++ Sbjct: 4 EIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIN-----DPIAEPVQEFTGHE---------NGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL--IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC-LKVLPAH--SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH---VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE-GHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|3123159|sp|Q17963.1|WDR51_CAEEL (RecName: Full=WD repeat-containing protein wdr-5.1) HSP 1 Score: 98.5969 bits (244), Expect = 3.661e-21 Identity = 70/251 (27.89%), Postives = 113/251 (45.02%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVF 472 H + + FS G T S D ++KI +++ M+ + RTL H V + + + S S D T+K+F+ + K +K + V F+P ++ G VR++D TG C + ++P+H + +V ++ DG L S S DG ++IWD + Q I T + + V +F+ NGKY+L+S DS KLW+ S + L YTG EN +F Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE-------------------RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY--VFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC-IKTLPAH--SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD-DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTG------HENSKYCIF 305 HSP 2 Score: 90.1225 bits (222), Expect = 2.594e-18 Identity = 64/245 (26.12%), Postives = 119/245 (48.57%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDV--ERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCS-AQFT-RNGKYVLSSGKDSLCKLWELST---TRCLIAYT 456 +T HK A+SSD + S D ++KI ++ RM +TL H + V +F+P+ ++ SGS D +V+++D K + +D PV++++F+ G + G + +VR++DT GQC V + VK+SP+GK +++++D ++K+WD + + + H+ ++ C A F+ GK+++S +D +W L T +CL +T Sbjct: 125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRM---------------------TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSD--PVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV--DDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT-GHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHT 343
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|20532311|sp|Q8YRI1.1|YY46_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr3466) HSP 1 Score: 100.908 bits (250), Expect = 6.555e-21 Identity = 101/374 (27.01%), Postives = 153/374 (40.91%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVE---------------RMLAKS-NIEHLSNPNHEQ-------GGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTG-----------------AGATGKQENRAQAV---------FNHTE---DFVMFPDEAT-------TSLCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 H R+ FS DG + A+G D +++ D+ R L S N L+N + +Q + TL H + V A+ F P LASGS D TV+L+D S + ++ T V S+ F+P G L G VRL++ N+ +C H + SV ++PDG + S S D ++++WD SS+ + TF + V S F +G + S D +LWE+S+++CL + G A + Q R ++ HT + PD A ++ W + K L +L GHN V IV SP + SDD R W Sbjct: 1073 HTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSW--VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLC---TFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNW--VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG--KCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437 HSP 2 Score: 95.9005 bits (237), Expect = 2.036e-19 Identity = 88/322 (27.33%), Postives = 135/322 (41.93%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTS-------LCCWDSRNATRKQLLSL-GHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 H + FS DG + A+GS D ++++ D+ ++T H V ++ F P +LASGS D TV+L+D S + T V S+AF+ G L G VRL+D ++ QCF H + SV +S DG + S S D ++++WD S + T H V S F+ +G + S G D + +LW++S+ CL YT G T + V P+ T + + WD +++K L +L GH V + SP + S D R W Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDI-------------------SSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGW--VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCF---YIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL-QGHTSC-VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCL--YTLQGYT-----------SWVRFLVFSPNGVTLANGSSDQIVRLWDI--SSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185 HSP 3 Score: 83.9593 bits (206), Expect = 1.417e-15 Identity = 88/319 (27.59%), Postives = 126/319 (39.50%), Query Frame = 0 Query: 224 GNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTS-------LCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 G+ AFS DG L ATG ++ + A + E L+ H V ++ F +LASGS D TV+L+D S K K T V S+ F P L G VRL+D ++G+C H + SV ++ DG + + S D ++++WD SSQ F H V S F+ +G + S D +LW++S+ CL YT G T + V PD A + + WD + L G+ VR +V SP S D R W Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWE-----AATGKELLTCKGHNSW--------------VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHT--SRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECL---YIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIF-QGHTSC-VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCL--YTLQGHT-----------SCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQ-GYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143 HSP 4 Score: 82.8037 bits (203), Expect = 2.842e-15 Identity = 62/231 (26.84%), Postives = 105/231 (45.45%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCL 452 H + AF+ DG++ A+GS D ++++ ++ + T H V+++ F P +LASGS D TV+L+ S S + + V S+ F P G L G VRL+ ++G+C H + S+ +SPDG L S S D ++++W+ S + + T + H + V S F+ +G + S D KLW++ T C+ Sbjct: 1283 HTNWVNSVAFNPDGSMLASGSGDQTVRLWEI-------------------SSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSIS--SGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLY---TLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTL-HGHINS-VRSVAFSSDGLILASGSDDETIKLWDVKTGECI 1487 HSP 5 Score: 76.2554 bits (186), Expect = 3.784e-13 Identity = 59/206 (28.64%), Postives = 93/206 (45.15%), Query Frame = 0 Query: 222 HKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTIT-DAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFAN--AHDGAEVCSAQ 424 H + FS DGT+ A+GS D ++++ + + T H + V ++ F P ILASGS D TV+L+ S + K + T+ V SI F P G L G VRL++ ++G+C H H + SV +S DG + S S D +IK+WD + + I T + ++G + S + Sbjct: 1325 HTSWVSSVTFSPDGTMLASGSDDQTVRLWSI-------------------SSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSIS---SGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLY---TLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEKIYEGMNITSVR 1505
BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Match: gi|322518324|sp|B6GZD3.1|LIS12_PENCW (RecName: Full=Nuclear distribution protein nudF 2; AltName: Full=Lissencephaly-1 homolog 2; Short=LIS-1 2) HSP 1 Score: 97.4413 bits (241), Expect = 2.026e-20 Identity = 80/282 (28.37%), Postives = 128/282 (45.39%), Query Frame = 0 Query: 274 HPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGD-FLLVGCHQPI-VRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAV-------FNHTEDFV-----MFPDEATT------SLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFW 535 HP IR+L H D + + FHPK ++ASGS D T++++D+ ++ ++ +K T A V + + T LL C ++L+DT V ++ H H + +V++ P G L SAS D + +W+ I+ + T + S F +G+++LS+G D +LWE+S ++ + +T G ENR F + F+ E T S+ WDS R + GH VR I P L+ SDD R W Sbjct: 105 HP-IRSLESHRDSINCIAFHPKYSLIASGSGDLTIRIWDWEDSTLERTLKGHTMA--VCDVDYGDTSSGILLASCSSDFTIKLWDTTDDYKNVKTLRGHDHI--VSAVRFIPSGNLLASASRDMKVILWNVINGYRVKTIEDHTGWVRDISPSF--DGQFLLSTGDDMTVRLWEISASQPICKFTATG----HENRILCCAVAPATSFRYLASFLESRGSTIAAEITATGSRDKSIKLWDSHG--RCIMTLTGHASWVRAIAFHPGGKYLLSVSDDKTMRCW 373 HSP 2 Score: 63.929 bits (154), Expect = 1.445e-9 Identity = 80/315 (25.40%), Postives = 133/315 (42.22%), Query Frame = 0 Query: 219 VTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEP--ILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTS-IAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATF-ANAHDGAEVCSA-----QFTRNGKYVLSSG------------KDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWD-SRNATRKQLLSLGHNGVV 511 + SH+ + AF +L A+GS D +I+I D E S +E RTL H V +D+ +LAS S DFT+KL+D T K +KT+ + + S + F P+G+ L V L++ G V ++ H + + S DG+ +S D ++++W+ +SQ I F A H+ +C A F ++ S G +D KLW+ S RC++ TG + +A+ H + ++ CWD S+ + +S H+G + Sbjct: 110 LESHRDSINCIAFHPKYSLIASGSGDLTIRIWDWE----DSTLE---------------RTLKGHTMAVCDVDYGDTSSGILLASCSSDFTIKLWD--TTDDYKNVKTLRGHDHIVSAVRFIPSGNLLASASRDMKVILWNVINGY-RVKTIEDHTGW--VRDISPSFDGQFLLSTGDDMTVRLWEISASQPICKFTATGHENRILCCAVAPATSFRYLASFLESRGSTIAAEITATGSRDKSIKLWD-SHGRCIMTLTG------HASWVRAIAFHPGGKYLLSVSDDKTMRCWDLSQQGRCVKSISNAHDGFI 393
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|795053941|ref|XP_011871011.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X2 [Vollenhovia emeryi]) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+SS+ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNMIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRAKKDSSANLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIT-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|815799842|ref|XP_012220564.1| (PREDICTED: cleavage stimulation factor subunit 1 [Linepithema humile]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 304/431 (70.53%), Postives = 352/431 (81.67%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRNEV----------LGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G E D K++ N + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+SS+ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEVDPKNIIKSREQLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDTSNSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSSRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|751218509|ref|XP_011162294.1| (PREDICTED: cleavage stimulation factor subunit 1 [Solenopsis invicta]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDNSTSISTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|951565066|ref|XP_014481393.1| (PREDICTED: cleavage stimulation factor subunit 1 [Dinoponera quadriceps]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 305/437 (69.79%), Postives = 352/437 (80.55%), Query Frame = 0 Query: 113 GGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGM--ERDTDIKNSRN---------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 G N PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G E D K S N LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 3 GQNATKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGAAHEPDRSKKESNNVSTFASSFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 438
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|826453264|ref|XP_012532678.1| (PREDICTED: cleavage stimulation factor subunit 1 isoform X1 [Monomorium pharaonis]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 303/431 (70.30%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + PIVRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNVIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPIVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|769832588|ref|XP_011643192.1| (PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1 [Pogonomyrmex barbatus]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 306/449 (68.15%), Postives = 357/449 (79.51%), Query Frame = 0 Query: 102 PAGTQANATTLGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 P+ AN +T+ PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N IQ EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+S NA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 48 PSKNTANQSTM-----KEPEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSSNLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSXNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 490
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|1153833364|ref|XP_020293282.1| (cleavage stimulation factor subunit 1 isoform X1 [Pseudomyrmex gracilis]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 300/438 (68.49%), Postives = 351/438 (80.14%), Query Frame = 0 Query: 112 LGGNRDAAPEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRN-----------EVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 + N PE P NIIK+RE+LYRLMISQLFYDGHQ +A+QL N IQ EP CPPS++L HL+ +G + D N LGPGLDLEF+T++ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + + P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGD+L+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ I TF AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 1 MSNNATKEPEVDPKNIIKSRETLYRLMISQLFYDGHQTLAMQLSNVIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKENTSLSTFASSFDNTLGPGLDLEFETEIQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEVP-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDYLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHSNGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRR 437
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|225719552|gb|ACO15622.1| (Cleavage stimulation factor 50 kDa subunit [Caligus clemensi]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 303/430 (70.47%), Postives = 351/430 (81.63%), Query Frame = 0 Query: 120 PEF-IPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIK----------NSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PEF + GN++KNRE+LYRLMISQLFYDGHQQ+A+QL + EPACPPSE+L +V LGME++ + N+ N + LDLEFDT++ S APEPA YETAYVTSHK CRAGAFSSDG LCATGS DASIK+LDV+RMLAKSN E + E GHPVIRTLYDH+DEVT L+FHPKE ILASGS+D T+KLFD+SK SAKKA +TITDAE + S++F+PTGDFLL GC P+VRLYD NT QCFV S+ H E+ VKWS DGKLYVS S+DG+ KIWDG+SS+V+ TF AHDGAEVCSA FTRNGKY+L+SGKDSL KLWELST+RCLIAYTGAG TG+QE+RAQAVFNHT+D+VMFPDEATTSLCCWDSRNA+RK LLSLGHNG VR+IVHS +SPAFLT SDDFRARFW+KR Sbjct: 13 PEFTLGGNVLKNREALYRLMISQLFYDGHQQVALQLSGIVGTEPACPPSERLHKVVTLGMEKERNALAASKAAASAPNNTNGMSLYSLDLEFDTEMRSEAPEPALYETAYVTSHKSFCRAGAFSSDGQLCATGSADASIKVLDVDRMLAKSNNEIPVSKQSE--GHPVIRTLYDHVDEVTCLEFHPKETILASGSKDNTIKLFDYSKASAKKACRTITDAEKIQSLSFNPTGDFLLAGCEHPVVRLYDVNTSQCFVSSISQQRHNAEVTVVKWSNDGKLYVSTSLDGTFKIWDGVSSKVVNTFEQAHDGAEVCSAYFTRNGKYILTSGKDSLIKLWELSTSRCLIAYTGAGTTGRQEHRAQAVFNHTDDYVMFPDEATTSLCCWDSRNASRKTLLSLGHNGAVRNIVHSTVSPAFLTSSDDFRARFWFKR 440
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|780628358|ref|XP_011684871.1| (PREDICTED: cleavage stimulation factor subunit 1 [Wasmannia auropunctata]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 302/431 (70.07%), Postives = 351/431 (81.44%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTD------------IKNSRNEVLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P NIIK+RE LYRLMISQLFYDGHQ +AVQL N +Q EP CPPS++L HL+ +G + D +S + LGPGLDLEF+T+ + APEPA YETAYVTSHKGNCRAGAFSSDG L ATGSVDASIKILDV+RMLAKS E ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P+VRLYD NT QCFV S+PSH H I S+K+SPD K Y SA DGSIK+WDG+S++ + TFA AHDG EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFW++R Sbjct: 4 PEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMMQAEPPCPPSDRLLHLMLIGTAHEPDRSKKDNSTSLSTFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSSDGQLIATGSVDASIKILDVDRMLAKSAPEEIA-PGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNRCVNTFAKAHDGYEVCSVIFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLTCSDDFRARFWFRR 433
BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Match: gi|970898967|ref|XP_015115117.1| (PREDICTED: cleavage stimulation factor subunit 1 [Diachasma alloeum]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 302/434 (69.59%), Postives = 351/434 (80.88%), Query Frame = 0 Query: 120 PEFIPGNIIKNRESLYRLMISQLFYDGHQQIAVQLQNAIQPEPACPPSEKLFHLVNLGMERDTDIKNSRNE---------------VLGPGLDLEFDTDLPSSAPEPAYYETAYVTSHKGNCRAGAFSSDGTLCATGSVDASIKILDVERMLAKSNIEHLSNPNHEQGGHPVIRTLYDHMDEVTALDFHPKEPILASGSRDFTVKLFDFSKTSAKKAMKTITDAEPVTSIAFHPTGDFLLVGCHQPIVRLYDTNTGQCFVGSVPSHHHQREILSVKWSPDGKLYVSASMDGSIKIWDGISSQVIATFANAHDGAEVCSAQFTRNGKYVLSSGKDSLCKLWELSTTRCLIAYTGAGATGKQENRAQAVFNHTEDFVMFPDEATTSLCCWDSRNATRKQLLSLGHNGVVRHIVHSPISPAFLTCSDDFRARFWYKR 538 PE P N+IKNRE+LYRLMISQLFYDGHQ IAVQL N IQ EP CPPS++L HL+ LG + D + +NE LGPGLDLE++T+ + APEPA YETAYVTSHKGNCRAGAFS+DG L ATGSVDASIKILDV+RMLAKS + ++ P + GGHPVIRTLYDH++EVT L+FHP+EPIL SGSRDF+VKLFDFSK S KKA +TITDA+ + ++FHPTGDFL+VG + P++RLYD NT QCFV S+P+H H I SVK+SPD K Y SA DGSIK+WDG+S++ I TF AHD EVCS FTRNGKY+LSSGKDSL KLWELST+RCLIAYTGAG TGKQE++AQA+FNHTED+VMFPDEATTSLC W+SRNA+RKQLLSLGHNG VR IVHSP +PAFLTCSDDFRARFWY+R Sbjct: 11 PEIDPKNVIKNRETLYRLMISQLFYDGHQTIAVQLSNLIQAEPPCPPSDRLLHLMLLGTAHEPD-RAKKNEGSNANHTPSFSSFDNTLGPGLDLEYETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMT-PGDQAGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVGTNHPVIRLYDINTAQCFVCSIPNHQHTAGITSVKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDSYEVCSVAFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWYRR 442 The following BLAST results are available for this feature:
BLAST of cleavage stimulation factor 50 kda subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cleavage stimulation factor 50 kda subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cleavage stimulation factor 50 kda subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold403_size186359:168922..170880+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold403_size186359-processed-gene-0.17 ID=snap_masked-scaffold403_size186359-processed-gene-0.17|Name=cleavage stimulation factor 50 kda subunit|organism=Tigriopus kingsejongensis|type=gene|length=1959bp|location=Sequence derived from alignment at scaffold403_size186359:168922..170880+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cleavage stimulation factor 50 kda subunit' has the following synonyms
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