vesicle transport protein use1-like isoform x2, snap_masked-scaffold474_size162001-processed-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Namevesicle transport protein use1-like isoform x2
Unique Namesnap_masked-scaffold474_size162001-processed-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. L. salmonis genes
Match: EMLSAG00000005945 (supercontig:LSalAtl2s:LSalAtl2s321:154585:156007:1 gene:EMLSAG00000005945 transcript:EMLSAT00000005945 description:"maker-LSalAtl2s321-augustus-gene-1.28")

HSP 1 Score: 107.071 bits (266), Expect = 2.152e-27
Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 0 
Query:  164 VAPLPAAARQAHPVSQQLFRQLTERGHGRERHELLGQSDAELRRRLPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQL-CRWWIWLIILIVTVTFVAMVMIMKVFRK 316
            + P P A      V +++FR+  ER   ++R EL   +  E  R      + +   L+     AQE++AE+M+ LT+SLK  + AA  +I +D +SLE T   A+ N  +L VE++RL +H     CR WIW+++ IV +TF+ M++IMK+F+K
Sbjct:  120 IPPPPLANLDNDSVQKEIFRKTIERYRAQDRKELFESNKGESSRLRKRRDEQSAQSLIHDQDVAQEEIAEQMLSLTKSLKEQTEAANRMIHRDISSLEGTRRTADENIBKLAVESDRLQEHRSTFNCRCWIWILMFIVVMTFLKMLVIMKLFKK 273
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|83288173|sp|Q7ZTY7.1|USE1_DANRE (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein)

HSP 1 Score: 110.538 bits (275), Expect = 2.011e-27
Identity = 55/159 (34.59%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELL--GQSDA-----ELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  + +  P S+ +  Q   R  G  R EL+  G S++     +LR R  +PVD       L  ++Q HH+ QE++A++M+ L R+LK ++LAA +II+QD  +L ++   A+VN  +L  E+ERL QH ++   W++WL++++V+ TF++M++ +++F
Sbjct:   96 PTISSERTPASKTVHIQSKARCAGEMRKELMSSGVSNSALLENDLRHRKSLPVDERQSAAELDQILQHHHNLQEKLADDMLNLARNLKNNTLAAQNIIKQDNQTLTQSMRQADVNFEKLKTESERLEQHAKKSVNWFLWLMLIVVSFTFISMILFIRLF 254
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|83288174|sp|Q9VSU7.3|USE1_DROME (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein)

HSP 1 Score: 96.2857 bits (238), Expect = 4.284e-22
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 0 
Query:  163 GVAPLPAAA----RQAHPVSQ------QLFRQL-TERGHGRERHELLGQSDAELRRR-------------LPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVFRKR 317
            G A +P +      Q+  VS+      +  RQL   + H   R ELL  SDA  RRR             +       ++   + + +AQE++ E M+ LTR+LK  +  A  IIR+DT  + R+  +A+ N   LG EAE+L QH+++  + W+WL+I  V  TF+ MV+ MK+ +K+
Sbjct:   70 GYADVPGSTTKTPSQSSAVSETGENALKEIRQLQNSKYHNELRKELLQDSDALRRRRGADESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKEQTETANRIIRRDTEVVSRSAGMADRNINSLGKEAEKLEQHSKKAYKCWLWLMIAFVIATFIGMVLFMKIMKKK 248
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|296452858|sp|Q9NZ43.2|USE1_HUMAN (RecName: Full=Vesicle transport protein USE1; AltName: Full=Putative MAPK-activating protein PM26; AltName: Full=USE1-like protein; AltName: Full=p31)

HSP 1 Score: 96.2857 bits (238), Expect = 4.510e-22
Identity = 57/161 (35.40%), Postives = 93/161 (57.76%), Query Frame = 0 
Query:  167 LPAAARQAHPVSQQLFRQLTERGHGRERHELLGQSDAE----LRRRLPV----PVD----GALSDLV-QAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            +P  AR+  P ++ +  Q   R     R ELLG   AE    +R+R  V    PV      A  DLV Q H + QE++AEEM+ L RSLK ++LAA  +I++D  +L  + ++A+ N  +L  E+ERL QHT++   W +W +++IV   F++M++ +++ 
Sbjct:   95 VPTTARERVPATKTVHLQSRARYTSEMRSELLGTDSAEPEMDVRKRTGVAGSQPVSEKQLAAELDLVLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKTESERLEQHTQKSVNWLLWAMLIIVCFIFISMILFIRIM 255
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|78103352|sp|Q9CQ56.1|USE1_MOUSE (RecName: Full=Vesicle transport protein USE1; AltName: Full=Protein D12; AltName: Full=USE1-like protein)

HSP 1 Score: 89.3521 bits (220), Expect = 2.072e-19
Identity = 48/161 (29.81%), Postives = 91/161 (56.52%), Query Frame = 0 
Query:  167 LPAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPV---PVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            +P  A++  P ++ +  Q   R     R ELLG     + + ++R+R      P D       L  ++Q H   QE++AEEM+ L RSLK ++LAA  +I++D  +L  + ++A+ N  +L +E+ERL QH ++   W +W ++++V   F++M++ +++ 
Sbjct:  106 VPTTAKERVPATKTVHLQSRARYTSEMRSELLGMEPSGECEVDMRKRAAKGSRPADERQSASELDLVLQRHQGLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKLESERLEQHAQKSVNWLLWAMLIVVCFVFISMILFIRIM 266
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|68065391|sp|Q9N598.2|USE1_CAEEL (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein)

HSP 1 Score: 62.3882 bits (150), Expect = 4.557e-10
Identity = 35/94 (37.23%), Postives = 62/94 (65.96%), Query Frame = 0 
Query:  228 QEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELA-EV--NRGRLGVEAERLSQHTRQLCRWWIWLIILIVTV--TFVAMVMIMKVFRK 316
            +E++A  +  + RS K    AAGD+I++DT   ER   +A EV  N+  LG+++ER+ +H  + C +  + ++LIV +  +FV+MV++MK+F+K
Sbjct:  162 EEELANSLATMARSFKTMMSAAGDVIKEDT---ERAILMAKEVDDNKTALGIQSERVERHAYK-CGYDCFKVMLIVLIFMSFVSMVLMMKIFKK 251
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|973201415|ref|XP_015220720.1| (PREDICTED: vesicle transport protein USE1 [Lepisosteus oculatus])

HSP 1 Score: 121.324 bits (303), Expect = 5.517e-29
Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-------QSDAELRRRLPVPVDGALSDLV-----QAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +    S+ +  Q   R  G  R ELLG       ++DAE+R+R  +P+D   SD V     Q HH  QE++AEEM+ L R+LK +SLA  +II+QD  +L ++  +A++N  +L  E+ERL QHT++   W++WL++++V  TF++M++ +++F
Sbjct:   96 PTTANERTSASKTVHLQTKARCTGEMRTELLGTVSPNAGRTDAEMRQRRGLPLDEKQSDAVLDAVLQHHHSLQEKLAEEMLSLARNLKNNSLATQNIIKQDNQTLTQSMRMADLNFEKLKTESERLEQHTKKSVNWFLWLMLIVVCFTFISMILFIRIF 254
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1233196623|ref|XP_022198102.1| (vesicle transport protein USE1 [Nilaparvata lugens])

HSP 1 Score: 120.553 bits (301), Expect = 8.214e-29
Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 0 
Query:  157 PVVRPYGVAPLPAAARQAHPVSQQLFRQLTERGHGRERHELLGQSDAELRRRLPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVFRKR 317
            PV +      LP+       VS+Q+  + T + H + R  L G+ +  +R+R        L  L++ HH  QE++A+EM+ L R++K  S  A  II+ DTAS+E+++ELAE N   L  E+ERL +H+R   + W+W++++ V V F+ MV+ MKV RKR
Sbjct:   79 PVEKAVATQLLPSGPAATDNVSKQIHNKTTTKVHKQLREHLFGEKNDGVRKRQSATAGEDLDVLLKYHHSVQEKIADEMLVLARNMKEQSKLANVIIKNDTASVEKSSELAENNFSNLRKESERLQEHSRSSFKCWLWIMLIAVLVIFINMVLFMKVMRKR 239
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1007778704|ref|XP_015826770.1| (PREDICTED: vesicle transport protein USE1 [Nothobranchius furzeri])

HSP 1 Score: 120.168 bits (300), Expect = 1.344e-28
Identity = 60/156 (38.46%), Postives = 98/156 (62.82%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P S+ +  Q   R  G  R ELLG      D+ELR R  +PVD       L  ++Q HH+ QE++AE+MI L R+LK ++LAA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   95 PTIANERMPASKTVHMQSKARCTGEMRAELLGTQPSSKDSELRNRRSLPVDERQSAAELDAILQHHHNLQEKLAEDMINLARNLKNNTLAAQNIIKQDNQTLTQSMRQADMNFEKLRNESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 250
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|584017208|ref|XP_006803347.1| (PREDICTED: vesicle transport protein USE1-like [Neolamprologus brichardi])

HSP 1 Score: 117.087 bits (292), Expect = 7.560e-28
Identity = 56/153 (36.60%), Postives = 98/153 (64.05%), Query Frame = 0 
Query:  171 ARQAHPVSQQLFRQLTERGHGRERHELLGQS----DAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            A +   V++++  Q   R  G  R ELLG +    DA+LR R   P+D       L  ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   58 ANERMSVTKKVHTQTKARCTGEMRDELLGTASSGKDADLRNRRCFPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 210
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|657571114|ref|XP_008289113.1| (PREDICTED: vesicle transport protein USE1 isoform X1 [Stegastes partitus])

HSP 1 Score: 117.857 bits (294), Expect = 1.115e-27
Identity = 57/157 (36.31%), Postives = 99/157 (63.06%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P ++ +  Q   R  G  R ELLG     +  ++LR R  VP+D       L  ++Q HH+ QE++AE+M+ L R+LK++SLAA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   95 PTIANERMPATKTVHMQTKARCTGEMRDELLGTGSSDKGTSDLRNRRCVPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKSNSLAAQNIIKQDNQTLSQSMRQADMNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 251
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1229130433|ref|XP_022096653.1| (vesicle transport protein USE1-like [Acanthaster planci] >gi|1229130435|ref|XP_022096664.1| vesicle transport protein USE1-like [Acanthaster planci])

HSP 1 Score: 117.857 bits (294), Expect = 1.230e-27
Identity = 91/267 (34.08%), Postives = 138/267 (51.69%), Query Frame = 0 
Query:   63 ARTRTNLRRMAARVTRLAQRHPPPSPEDLRDYRDQVQFLTRTLAHLAPPTRDPSV----ALGVDVPGLALTRDSPLQFPRRVGSAAPARRDSPAAAPL--PVVRPYGVAPLPAAARQAHPVS-QQLFRQLTERGHGRERHELLGQSDAE---LR-RRLPVPVDGALSD----LVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            +R   NL+R+  R   +A        +D  D+R + +F+      LA   R PS+    AL      +   +   L    ++ SA+    D   A+ L  P      ++  P    +  P S + L  Q T R     R ELL   D +   LR RRL  P D A SD    ++Q HH+ QE++AEEM+ LTRSLK +++AA +II++D   L  T +LA+ N GRL VE+ERL QHT++ C WW+W  +L V++ F+ M++ ++ F
Sbjct:    5 SRLEINLQRLLTRCEAMA------GEQDHGDWRLE-KFVGALQEKLAELKRSPSLPSQEALAEYAKKIDFLK--GLIQTEKLTSAS----DKAMASQLLAPAHSSTSISSEPKTHSKVLPTSSKDLHLQATSRYANEMRRELLETDDLQENGLRHRRLHDPDDKASSDDLDAVLQHHHNMQEKLAEEMLSLTRSLKHNTVAASNIIQEDNRRLGETIQLADSNYGRLKVESERLQQHTQRACNWWLWGSLLCVSIVFLWMIIFIRFF 258
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1079720046|ref|XP_018528792.1| (PREDICTED: vesicle transport protein USE1 isoform X2 [Lates calcarifer])

HSP 1 Score: 115.931 bits (289), Expect = 2.284e-27
Identity = 55/159 (34.59%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLGQ-------SDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P ++ +  Q   R  G  R+ELLG        S+ +LR R  +P+D       L  ++Q HH+ QE++AE+M+ L R+LK +++AA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   55 PTIANERMPATKTVHMQTKARCTGEMRNELLGTILSGKGTSETDLRNRRGLPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTMAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 213
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1143365388|ref|XP_019935980.1| (PREDICTED: vesicle transport protein USE1 isoform X3 [Paralichthys olivaceus])

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-27
Identity = 55/159 (34.59%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLGQ-------SDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P ++ +  Q   R  G  R ELLG+       S+ +LR R  VP+D       L  ++Q HH+ QE++AE+M+ L R+LK +++AA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +W+++++V+ TF++M++ +++F
Sbjct:   55 PTIANERMPATKTVHIQTKARCTGEMRDELLGKVPSGKGTSETDLRNRRGVPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTMAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWMMLILVSFTFISMILFIRIF 213
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|961895974|ref|XP_014854697.1| (PREDICTED: vesicle transport protein USE1 isoform X1 [Poecilia mexicana])

HSP 1 Score: 116.316 bits (290), Expect = 4.291e-27
Identity = 56/157 (35.67%), Postives = 99/157 (63.06%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P ++ +  Q   R  G  R ELLG     ++D +LR R  +P+D       L  ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   95 PTIANERMPATKTVHIQSKARCTGEMRDELLGTRTSGKADGDLRNRRVLPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 251
[Close]
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|941783290|ref|XP_005800569.2| (vesicle transport protein USE1 isoform X1 [Xiphophorus maculatus])

HSP 1 Score: 116.316 bits (290), Expect = 4.763e-27
Identity = 56/157 (35.67%), Postives = 99/157 (63.06%), Query Frame = 0 
Query:  168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314
            P  A +  P ++ +  Q   R  G  R ELLG     ++D +LR R  +P+D       L  ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD  +L ++   A++N  +L  E+ERL QHT++   W +WL++++V+ TF++M++ +++F
Sbjct:   95 PTIANERMPATKTVHIQSKARFTGEMRDELLGTRMSVKADGDLRNRRVLPLDERQSAAELDAVMQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 251
The following BLAST results are available for this feature:
BLAST of vesicle transport protein use1-like isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000059452.152e-2736.36supercontig:LSalAtl2s:LSalAtl2s321:154585:156007:1... [more]
back to top
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|83288173|sp|Q7ZTY7.1|USE1_DANRE2.011e-2734.59RecName: Full=Vesicle transport protein USE1; AltN... [more]
gi|83288174|sp|Q9VSU7.3|USE1_DROME4.284e-2232.96RecName: Full=Vesicle transport protein USE1; AltN... [more]
gi|296452858|sp|Q9NZ43.2|USE1_HUMAN4.510e-2235.40RecName: Full=Vesicle transport protein USE1; AltN... [more]
gi|78103352|sp|Q9CQ56.1|USE1_MOUSE2.072e-1929.81RecName: Full=Vesicle transport protein USE1; AltN... [more]
gi|68065391|sp|Q9N598.2|USE1_CAEEL4.557e-1037.23RecName: Full=Vesicle transport protein USE1; AltN... [more]
back to top
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|973201415|ref|XP_015220720.1|5.517e-2937.74PREDICTED: vesicle transport protein USE1 [Lepisos... [more]
gi|1233196623|ref|XP_022198102.1|8.214e-2937.27vesicle transport protein USE1 [Nilaparvata lugens... [more]
gi|1007778704|ref|XP_015826770.1|1.344e-2838.46PREDICTED: vesicle transport protein USE1 [Nothobr... [more]
gi|584017208|ref|XP_006803347.1|7.560e-2836.60PREDICTED: vesicle transport protein USE1-like [Ne... [more]
gi|657571114|ref|XP_008289113.1|1.115e-2736.31PREDICTED: vesicle transport protein USE1 isoform ... [more]
gi|1229130433|ref|XP_022096653.1|1.230e-2734.08vesicle transport protein USE1-like [Acanthaster p... [more]
gi|1079720046|ref|XP_018528792.1|2.284e-2734.59PREDICTED: vesicle transport protein USE1 isoform ... [more]
gi|1143365388|ref|XP_019935980.1|3.196e-2734.59PREDICTED: vesicle transport protein USE1 isoform ... [more]
gi|961895974|ref|XP_014854697.1|4.291e-2735.67PREDICTED: vesicle transport protein USE1 isoform ... [more]
gi|941783290|ref|XP_005800569.2|4.763e-2735.67vesicle transport protein USE1 isoform X1 [Xiphoph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold474_size162001supercontigscaffold474_size162001:137880..141845 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold474_size162001-processed-gene-0.23-mRNA-1snap_masked-scaffold474_size162001-processed-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold474_size162001:137880..141845-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold474_size162001-processed-gene-0.23 ID=snap_masked-scaffold474_size162001-processed-gene-0.23|Name=vesicle transport protein use1-like isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=3966bp|location=Sequence derived from alignment at scaffold474_size162001:137880..141845- (Tigriopus kingsejongensis)
GCATCGGCTGCTCAGGCCACCCCCGAGACCCACCCGGACCAGCAGTCCCG
GAGCCCACGCGCCACCCGCTAGCATGGGAGGGGCTGAGGCCACGCCTCGC
TCTTGGGCCGAGATGGAGCTCCGCCTCCAATTGCGGGCCCTCGAGAAGCA
GTGCCAGCAGTGGATGGCCCACGAACCGCCCGCAGGCCAGCCGGCCCGGA
CCCGCACCAATTTGCGCCGCATGGCGGCCCGGGTGACGCGCCTCGCCCAA
CGGCACCCGTCCGTGCCCGCTGGCTCCGGTGCCCGCTGGCCTCGTCTCAA
TGCCGGATTTTCTTTTGCAGACCGCCCAGTCCCGAGGATCTGCGCGACTA
CCGGGATCAGGTCCAGTTCCTCACCCGCACCCTGGCCCACCTGGCCCCGC
CCACGCGCGATCCGAGCGTGGCCTTGGGCGTGGACGTGCCCGGTCTGGCG
CTAACGCGGGACAGTCCGCTCCAATTCCCGCGACGGGTCGGCTCGGCTGC
GCCCGCCCGACGGGACAGTCCGGCGGCGGCGCCTTTGCCCGTGGTGCGGC
CCTACGGTGTAGCGCCATTGCCGGCCGCCGCCCGTCAGGCCCACCCCGTG
TCCCAGCAGCTCTTCCGCCAACTGACGGAGCGGGGTCACGGTCGGGAACG
CCATGAGCTCTTGGGTCAATCGGATGCGGGTAAGGTGGGCACCGGTGGCG
CTCAGAGCCCGCCTGGCCCGCTGCCGAAAGCTCAGTGCTTTTCCCTTTTC
TCCGGTAGAGCTGCGTCGACGCCTCCCCGTCCCGGTCGATGGTGCCTTGA
GCGACCTCGTCCAAGCCCATCACGATGCCCAAGAACAGGTGGCCGAGGAA
ATGATCCAGCTGACCCGCTCACTCAAGGCCCATTCGCTGGCCGCCGGCGA
TATCATTCGCCAGGATACGGCCTCGCTCGAACGGACCAACGAGCTGGCCG
AAGTCAACCGCGGTCGGCTCGGCGTGGAGGCCGAGCGCTTAAGCCAGCAC
ACCCGGCAACTCTGCCGCTGGTGGATCTGGCTCATCATCCTCATCGTGAC
CGTCACTTTCGTCGGTAAGCCACCGGGGTCCTCAGTCTGGTGTGTGCCTA
ATCCTAATCTAGCCGGTCACGCATTTTGCTTTACAGCTATGGTGATGATT
ATGAAGGTCTTCCGCAAACGCTGGTAGCCCGGTTGGATCCCGGGCGCCAG
GGGCCACCCCGGGACAGACATTGGGCACATTTATTGATATAACATGAAGC
GATGCAGAGACTGTGATATACGCCCATCGAGCCTATTGACCCGCCGCATT
TTGAACGATCGACGGGGACCCGATTAGCGCGACTCGGGCTTCGTCTTGGG
CGGTCGGAAGCCCAAGGGCGAAAACTTCTTCTTTTTGACCTTCTTCTTGG
CCGGTCCGCTCGTGGGCGGTGGGGCGCGGATCGGCTCGGCCGGCGGACCG
GCCGAGGGTCCGGACGAGCTCCCGGCCTTAAAGGTTTGCCACGAATTCAC
CCGGCCCTGACGCGACTCTTCCCAGTTTTTATGGAATTCCTTCTCCATGT
TGCGCCGCTCTTCGGTGGCCAGTTCATCGGCCCGCTTCTTGGCCGCTTGG
TCGGAGATCTTCTGCTCTTGCGTGCGTCGCTTGCGCTCCAAGTCGGCAAA
CAGCTTCATGATGAGGACGTGGACGGCCTGCTTGAGCTTGGCCGGGTCGT
CTTCCTCCACGGCCGCGGACAGACCTTGCTTCTTCCGCTGCTTGCGCTTC
TCCTCCACGGTGAGACGCGTGCGACCCTCGGCTTCCTCCACGATCTCCAT
GCACTGGGCCCGCGTCTTCACGTCATCCAGCATCTCGTAGGCCTTCTTGA
CGGCGTCGAAAGCGGCTTGGGCCCGCTCCACATTCTTGGGGTTCTTGTCC
GGATGGACCAGGATGGAGAGGCGCCGATACTTCTTGCGCACCTCCTCCGG
CGCCGTGCCCGGATCGAGCTGCAGCACCTCGAAGGGGTTGAGATTGCGGT
AGGTGGAGCCGGGCCGGAGCAGCCGATCGATTTGCTGGTCGGAGGTGAGC
ACCGAATCGCGTTTCTCCGTGGCCTTCAGCTCCGTGTAGAAGGCCTCGAA
GCCCTCGCCCGTCTCGGCCATGACCGCCCGGGGGCCCGGCCTCACGTCGA
TGGGTGGGCGCTGCTCCTGGCTCCCCTGATACCGCTCGGGCTGGGCTAGG
CGTCCGGGTATCGCTCGGGTGCCGCTCCAGGAGGCTGTGGCGGTGTTGTG
GTGGGCTGTTGTGGAAGCGCATCAACCACCAGAGGGCGAGTCCGCACCTC
GAGGTTGGGCGAGTCCCCGCATTCTACCCAAATGGAAAGGGCTGGTTTCA
CCTAGAGATCCTGTTTCACCCAAAGCCGCTAATATCGCTATATGAGGCCA
TGACATACCATGATTAGGATATCAAGGCACAAGGGTACGCTAGAGATATT
AGGGGCTTCTAGTTTTACTATTTGAAGGCGCCCATGCTACGGTCGAGGTC
CGACAGGTGGTGTGTGATCTTTTTGATTTGTGAATCGGGCGAAGCTCGAA
TGTTGGAGTCTTTTGGGCTTGGCGTTGGACATTTGCCGTTGCGACTCTCA
CCTCTCACTACGGAGTAAATACAAGGATACTATGACTAGGGATTCGAATG
TCAGGCCGACAAAATGACTGAAGAGCCTGAAGACAATGTATGCCCAGAAA
TCGCCAGATACAACCAGCTGAATAGGCGTTAAAGCGCCAAATTGCGAACA
ANCACTTTCGTCGGTAAGCCACCGGGGTCCTCAGTCTGGTGTGTGCCTAA
TCCTAATCTAGCCGGTCACGCATTTTGCTTTACAGCTATGGTGATGATTA
TGAAGGTCTTCCGCAAACGCTGGTAGCCCGGTTGGATCCCGGGCGCCAGG
GGCCACCCCGGGACAGACATTGGGCACATTTATTGATATAACATGAAGCG
ATGCAGAGACTGTGATATACGCCCATCGAGCCTATTGACCCGCCGCATTT
TGAACGATCGACGGGGACCCGATTAGCGCGACTCGGGCTTCGTCTTGGGC
GGTCGGAAGCCCAAGGGCGAAAACTTCTTCTTTTTGACCTTCTTCTTGGC
CGGTCCGCTCGTGGGCGGTGGGGCGCGGATCGGCTCGGCCGGCGGACCGG
CCGAGGGTCCGGACGAGCTCCCGGCCTTAAAGGTTTGCCACGAATTCACC
CGGCCCTGACGCGACTCTTCCCAGTTTTTATGGAATTCCTTCTCCATGTT
GCGCCGCTCTTCGGTGGCCAGTTCATCGGCCCGCTTCTTGGCCGCTTGGT
CGGAGATCTTCTGCTCTTGCGTGCGTCGCTTGCGCTCCAAGTCGGCAAAC
AGCTTCATGATGAGGACGTGGACGGCCTGCTTGAGCTTGGCCGGGTCGTC
TTCCTCCACGGCCGCGGACAGACCTTGCTTCTTCCGCTGCTTGCGCTTCT
CCTCCACGGTGAGACGCGTGCGACCCTCGGCTTCCTCCACGATCTCCATG
CACTGGGCCCGCGTCTTCACGTCATCCAGCATCTCGTAGGCCTTCTTGAC
GGCGTCGAAAGCGGCTTGGGCCCGCTCCACATTCTTGGGGTTCTTGTCCG
GATGGACCAGGATGGAGAGGCGCCGATACTTCTTGCGCACCTCCTCCGGC
GCCGTGCCCGGATCGAGCTGCAGCACCTCGAAGGGGTTGAGATTGCGGTA
GGTGGAGCCGGGCCGGAGCAGCCGATCGATTTGCTGGTCGGAGGTGAGCA
CCGAATCGCGTTTCTCCGTGGCCTTCAGCTCCGTGTAGAAGGCCTCGAAG
CCCTCGCCCGTCTCGGCCATGACCGCCCGGGGGCCCGGCCTCACGTCGAT
GGGTGGGCGCTGCTCCTGGCTCCCCTGATACCGCTCGGGCTGGGCTAGGC
GTCCGGGTATCGCTCGGGTGCCGCTCCAGGAGGCTGTGGCGGTGTTGTGG
TGGGCTGTTGTGGAAG
back to top
Synonyms
The feature 'vesicle transport protein use1-like isoform x2' has the following synonyms
Synonym
Tk10286
Add to Basket