vesicle transport protein use1-like isoform x2, snap_masked-scaffold474_size162001-processed-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vesicle transport protein use1-like isoform x2 vs. L. salmonis genes
Match: EMLSAG00000005945 (supercontig:LSalAtl2s:LSalAtl2s321:154585:156007:1 gene:EMLSAG00000005945 transcript:EMLSAT00000005945 description:"maker-LSalAtl2s321-augustus-gene-1.28") HSP 1 Score: 107.071 bits (266), Expect = 2.152e-27 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 0 Query: 164 VAPLPAAARQAHPVSQQLFRQLTERGHGRERHELLGQSDAELRRRLPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQL-CRWWIWLIILIVTVTFVAMVMIMKVFRK 316 + P P A V +++FR+ ER ++R EL + E R + + L+ AQE++AE+M+ LT+SLK + AA +I +D +SLE T A+ N +L VE++RL +H CR WIW+++ IV +TF+ M++IMK+F+K Sbjct: 120 IPPPPLANLDNDSVQKEIFRKTIERYRAQDRKELFESNKGESSRLRKRRDEQSAQSLIHDQDVAQEEIAEQMLSLTKSLKEQTEAANRMIHRDISSLEGTRRTADENIBKLAVESDRLQEHRSTFNCRCWIWILMFIVVMTFLKMLVIMKLFKK 273
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|83288173|sp|Q7ZTY7.1|USE1_DANRE (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein) HSP 1 Score: 110.538 bits (275), Expect = 2.011e-27 Identity = 55/159 (34.59%), Postives = 99/159 (62.26%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELL--GQSDA-----ELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P + + P S+ + Q R G R EL+ G S++ +LR R +PVD L ++Q HH+ QE++A++M+ L R+LK ++LAA +II+QD +L ++ A+VN +L E+ERL QH ++ W++WL++++V+ TF++M++ +++F Sbjct: 96 PTISSERTPASKTVHIQSKARCAGEMRKELMSSGVSNSALLENDLRHRKSLPVDERQSAAELDQILQHHHNLQEKLADDMLNLARNLKNNTLAAQNIIKQDNQTLTQSMRQADVNFEKLKTESERLEQHAKKSVNWFLWLMLIVVSFTFISMILFIRLF 254
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|83288174|sp|Q9VSU7.3|USE1_DROME (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein) HSP 1 Score: 96.2857 bits (238), Expect = 4.284e-22 Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 0 Query: 163 GVAPLPAAA----RQAHPVSQ------QLFRQL-TERGHGRERHELLGQSDAELRRR-------------LPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVFRKR 317 G A +P + Q+ VS+ + RQL + H R ELL SDA RRR + ++ + + +AQE++ E M+ LTR+LK + A IIR+DT + R+ +A+ N LG EAE+L QH+++ + W+WL+I V TF+ MV+ MK+ +K+ Sbjct: 70 GYADVPGSTTKTPSQSSAVSETGENALKEIRQLQNSKYHNELRKELLQDSDALRRRRGADESSSSSGSANVQETSGENMNQAAKYYTNAQEKITEHMLSLTRNLKEQTETANRIIRRDTEVVSRSAGMADRNINSLGKEAEKLEQHSKKAYKCWLWLMIAFVIATFIGMVLFMKIMKKK 248
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|296452858|sp|Q9NZ43.2|USE1_HUMAN (RecName: Full=Vesicle transport protein USE1; AltName: Full=Putative MAPK-activating protein PM26; AltName: Full=USE1-like protein; AltName: Full=p31) HSP 1 Score: 96.2857 bits (238), Expect = 4.510e-22 Identity = 57/161 (35.40%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 167 LPAAARQAHPVSQQLFRQLTERGHGRERHELLGQSDAE----LRRRLPV----PVD----GALSDLV-QAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 +P AR+ P ++ + Q R R ELLG AE +R+R V PV A DLV Q H + QE++AEEM+ L RSLK ++LAA +I++D +L + ++A+ N +L E+ERL QHT++ W +W +++IV F++M++ +++ Sbjct: 95 VPTTARERVPATKTVHLQSRARYTSEMRSELLGTDSAEPEMDVRKRTGVAGSQPVSEKQLAAELDLVLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKTESERLEQHTQKSVNWLLWAMLIIVCFIFISMILFIRIM 255
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|78103352|sp|Q9CQ56.1|USE1_MOUSE (RecName: Full=Vesicle transport protein USE1; AltName: Full=Protein D12; AltName: Full=USE1-like protein) HSP 1 Score: 89.3521 bits (220), Expect = 2.072e-19 Identity = 48/161 (29.81%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 167 LPAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPV---PVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 +P A++ P ++ + Q R R ELLG + + ++R+R P D L ++Q H QE++AEEM+ L RSLK ++LAA +I++D +L + ++A+ N +L +E+ERL QH ++ W +W ++++V F++M++ +++ Sbjct: 106 VPTTAKERVPATKTVHLQSRARYTSEMRSELLGMEPSGECEVDMRKRAAKGSRPADERQSASELDLVLQRHQGLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKLESERLEQHAQKSVNWLLWAMLIVVCFVFISMILFIRIM 266
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Match: gi|68065391|sp|Q9N598.2|USE1_CAEEL (RecName: Full=Vesicle transport protein USE1; AltName: Full=USE1-like protein) HSP 1 Score: 62.3882 bits (150), Expect = 4.557e-10 Identity = 35/94 (37.23%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 228 QEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELA-EV--NRGRLGVEAERLSQHTRQLCRWWIWLIILIVTV--TFVAMVMIMKVFRK 316 +E++A + + RS K AAGD+I++DT ER +A EV N+ LG+++ER+ +H + C + + ++LIV + +FV+MV++MK+F+K Sbjct: 162 EEELANSLATMARSFKTMMSAAGDVIKEDT---ERAILMAKEVDDNKTALGIQSERVERHAYK-CGYDCFKVMLIVLIFMSFVSMVLMMKIFKK 251
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1041070046|ref|XP_017262564.1| (PREDICTED: vesicle transport protein USE1 [Kryptolebias marmoratus]) HSP 1 Score: 116.316 bits (290), Expect = 4.831e-27 Identity = 60/158 (37.97%), Postives = 98/158 (62.03%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-QS------DAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKV 313 P A + P S+ + Q R G R ELLG QS D +LR R +PVD L ++Q HHD QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++ Sbjct: 95 PTIANERMPASKTVHLQTKARCTGEMRDELLGTQSSGKGTLDGDLRNRRGLPVDERQSAAELDAILQRHHDLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLTQSMRQADLNYEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRI 252
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|835988606|ref|XP_012779841.1| (vesicle transport protein USE1 isoform X2 [Maylandia zebra] >gi|1282286281|ref|XP_023009937.1| vesicle transport protein USE1 isoform X2 [Maylandia zebra]) HSP 1 Score: 115.161 bits (287), Expect = 4.956e-27 Identity = 55/153 (35.95%), Postives = 96/153 (62.75%), Query Frame = 0 Query: 171 ARQAHPVSQQLFRQLTERGHGRERHELLGQ----SDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 A + V++++ Q R G R ELLG D +LR R P+D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 58 ANERMSVTKKVHTQTKARCTGEMRDELLGTGSSGKDGDLRNRRCFPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 210
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1228007819|ref|XP_021935820.1| (vesicle transport protein USE1 isoform X2 [Zootermopsis nevadensis] >gi|1228007821|ref|XP_021935821.1| vesicle transport protein USE1 isoform X2 [Zootermopsis nevadensis] >gi|1228007823|ref|XP_021935822.1| vesicle transport protein USE1 isoform X2 [Zootermopsis nevadensis] >gi|1228007825|ref|XP_021935823.1| vesicle transport protein USE1 isoform X2 [Zootermopsis nevadensis] >gi|1228007827|ref|XP_021935824.1| vesicle transport protein USE1 isoform X2 [Zootermopsis nevadensis] >gi|646700733|gb|KDR10759.1| Vesicle transport protein USE1 [Zootermopsis nevadensis]) HSP 1 Score: 115.546 bits (288), Expect = 6.046e-27 Identity = 77/268 (28.73%), Postives = 134/268 (50.00%), Query Frame = 0 Query: 63 ARTRTNLRRMAARVTRLAQRHPPPSPEDLRDYR--DQVQFLTRTLAHLAPPTRDPSVALGVDVPGLALTRDSPLQFPRRV----GSAAPARRDSPAAAPLPV-VRPYGVAPLPAAARQ------AHPVSQQLFRQLTERGHGRERHELLGQSDAELRRRLPVPVDGALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVFRKR 317 ++ NLRR+ ++ +A+ P +D+R + L + +L PS +D+ ++ RRV G + +PA + V + P+G A A + A +++L QL + G G SD LR+R L L++ HH QE++A++M+ L R+LK S AG IIR+DT ++ +++ +A+ N RL VE+ERL +H+R+ C+ WIW+++ V + F+ MV+ MK+ +K+ Sbjct: 5 SKLEVNLRRLLSQCENMAKEDPQ------KDWRLDKYIGALDEMVTNLQKLPNKPS-------------KDTMAEYIRRVLFLKGIIETHKLTNPAEKIVAVQLVPHGPATSSEAVTKEIHQTTASKYAKELREQLLQNGSG---------SDKNLRQRKQKSGGEDLDALIKYHHSMQEKIADDMLLLARNLKEQSQLAGSIIRRDTETVGKSSNMADHNFARLKVESERLEEHSRRACKCWIWVMVAAVVIIFINMVLFMKIMKKK 244
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|831303321|ref|XP_012683753.1| (PREDICTED: vesicle transport protein USE1 [Clupea harengus]) HSP 1 Score: 115.931 bits (289), Expect = 6.348e-27 Identity = 54/159 (33.96%), Postives = 100/159 (62.89%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLGQ-------SDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P S+ + Q R G R+EL+G+ S+++LR+R +P+D L ++Q HH+ QE++AEEM+ L R+LK ++LA +II+QD +L ++ A+ N +L E++RL QH ++ W++WL++++V+ TF++M++ +++F Sbjct: 96 PTIANERMPASKTVHMQTKARCTGEMRNELMGKGSSGADPSESDLRQRRALPLDERQSAAELDSILQQHHNLQEKLAEEMLNLARNLKNNTLAQQNIIKQDNQTLSQSMRQADNNFEKLKTESDRLEQHAKKSVNWFLWLMLVLVSFTFISMILFIRIF 254
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|928073440|ref|XP_013886578.1| (PREDICTED: vesicle transport protein USE1 [Austrofundulus limnaeus]) HSP 1 Score: 115.931 bits (289), Expect = 7.410e-27 Identity = 59/159 (37.11%), Postives = 98/159 (61.64%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-QS------DAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P S+ + Q R G R ELLG QS D +LR R +P D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 95 PTIANERMPASKTVHLQTKARCTGEMRDELLGTQSSGKGNLDGDLRNRRGLPADERQSAAELDAILQRHHNLQEKLAEDMLSLARNLKNNTLAAQNIIKQDNQTLTQSMRQADLNYEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 253
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1025438677|ref|XP_007552787.2| (PREDICTED: vesicle transport protein USE1 isoform X1 [Poecilia formosa]) HSP 1 Score: 115.931 bits (289), Expect = 8.516e-27 Identity = 56/157 (35.67%), Postives = 99/157 (63.06%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P ++ + Q R G R ELLG ++D +LR R +P+D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 117 PTIANERMPATKTVHIQSKARCTGEMRDELLGTRTSGKADGDLRNRRVLPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 273
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1279706999|ref|XP_022914716.1| (vesicle transport protein USE1 [Onthophagus taurus]) HSP 1 Score: 114.39 bits (285), Expect = 8.548e-27 Identity = 56/127 (44.09%), Postives = 84/127 (66.14%), Query Frame = 0 Query: 194 RHELLGQSDAELRRRLPVPVDGA---LSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVFRKR 317 R ELL E+R+R PV +G +L+ H + QE++A EMI+LT +LK HS A II++DT L R+N+L + N +L VE+E+L QH+++ + W+W++ILIV V FV MV+ MKV +K+ Sbjct: 89 REELL-----EVRKR-PVTKEGTGKDFDNLIDFHQNIQEKIANEMIELTNNLKEHSTLANKIIKKDTEVLGRSNQLTDANFSKLKVESEKLQQHSKKAWKCWMWILILIVLVVFVNMVLFMKVMKKK 209
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1169032984|ref|XP_020468707.1| (vesicle transport protein USE1 [Monopterus albus]) HSP 1 Score: 115.546 bits (288), Expect = 8.616e-27 Identity = 55/156 (35.26%), Postives = 98/156 (62.82%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLGQS----DAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P ++ + Q R G R ELLG + + +LR R +P+D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 95 PTIANERMPATKTVHMQTKARCTGEMRDELLGTASSGKETDLRNRRGLPLDERQSAAELDAILQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 250
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|961895978|ref|XP_014854698.1| (PREDICTED: vesicle transport protein USE1 isoform X2 [Poecilia mexicana]) HSP 1 Score: 115.546 bits (288), Expect = 8.706e-27 Identity = 56/156 (35.90%), Postives = 97/156 (62.18%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLGQ----SDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P ++ + Q R G R ELLG D +LR R +P+D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 95 PTIANERMPATKTVHIQSKARCTGEMRDELLGTRTSGKDGDLRNRRVLPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 250
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Match: gi|1039392971|ref|XP_008406173.2| (PREDICTED: LOW QUALITY PROTEIN: vesicle transport protein USE1 [Poecilia reticulata]) HSP 1 Score: 115.931 bits (289), Expect = 8.786e-27 Identity = 56/157 (35.67%), Postives = 99/157 (63.06%), Query Frame = 0 Query: 168 PAAARQAHPVSQQLFRQLTERGHGRERHELLG-----QSDAELRRRLPVPVD-----GALSDLVQAHHDAQEQVAEEMIQLTRSLKAHSLAAGDIIRQDTASLERTNELAEVNRGRLGVEAERLSQHTRQLCRWWIWLIILIVTVTFVAMVMIMKVF 314 P A + P ++ + Q R G R ELLG ++D +LR R +P+D L ++Q HH+ QE++AE+M+ L R+LK ++LAA +II+QD +L ++ A++N +L E+ERL QHT++ W +WL++++V+ TF++M++ +++F Sbjct: 117 PTIANERMPATKTVHIQSKARCTGEMRDELLGTRTSGKADGDLRNRRVLPLDERQSAAELDAVLQRHHNLQEKLAEDMLNLARNLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWLMLILVSFTFISMILFIRIF 273 The following BLAST results are available for this feature:
BLAST of vesicle transport protein use1-like isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of vesicle transport protein use1-like isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of vesicle transport protein use1-like isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold474_size162001:137880..141845- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold474_size162001-processed-gene-0.23 ID=snap_masked-scaffold474_size162001-processed-gene-0.23|Name=vesicle transport protein use1-like isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=3966bp|location=Sequence derived from alignment at scaffold474_size162001:137880..141845- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vesicle transport protein use1-like isoform x2' has the following synonyms
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