BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000007282 (supercontig:LSalAtl2s:LSalAtl2s409:129273:131364:-1 gene:EMLSAG00000007282 transcript:EMLSAT00000007282 description:"maker-LSalAtl2s409-augustus-gene-1.22")

HSP 1 Score: 1170.61 bits (3027), Expect = 0.000e+0
Identity = 541/673 (80.39%), Postives = 613/673 (91.08%), Query Frame = 0

Query:   17 SSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSLM 689
            + ++ D+M  RPLGAGQEVGRSCH+LEFKDKR+LLDCGIHPGL+GMDALPFVD+IEAD+IDLLL+SHFHLDHAGALPWFL+KTTFKGK FMTHATKAIYRWLLSD+IKVSNI+TEQMLYSEQDLE SMEKI TLNFHEEKEV GI+FWAYNAGHVLGA MFMIEIAGVR LYTGDFSREEDRHLMA E P+L+P VLI+E+TYGT+IHEKREDRE RFTST+H+IV RGGRCLIPVFALGRAQELLLILDEYW AHPELHEIPIYYASSLAKKCMAVYQTFVNAMN++IRRQI+V+NPFVFKHISNLKGIDHFDD+GPCVILASPGMMQSGLSRELFESWC+D KNGCIVAGYCVEGTLAKHILSEPEE+ +MNGQ+LPLK+QV+YISFSAHTDYKQTSGFIR LKPPHVILVHGEANEMSRLKSALIREYEADP T IDFYNPRNTV+VDL+FRGEKMAKV+G+LA++ PI +HRVSG+LVKRNFNYHIL+ +DL KYTDMT S VTQRQS+YY GSFQLLQF++SQ   D+     +++ KK IR F +ID++HE +M+TLEWIASPVNDMYADAVLSA+LQAES++ P+YIP NA+VD MHFKEC +E+LQDMFGEESVP TFSGD+F + V +KKA ID+ +L+V C ED+    I++TA +KL  SL+
Sbjct:    4 NGEDSDRMVFRPLGAGQEVGRSCHLLEFKDKRILLDCGIHPGLSGMDALPFVDLIEADEIDLLLVSHFHLDHAGALPWFLEKTTFKGKVFMTHATKAIYRWLLSDYIKVSNISTEQMLYSEQDLEASMEKIQTLNFHEEKEVKGIRFWAYNAGHVLGAXMFMIEIAGVRTLYTGDFSREEDRHLMAXEXPSLKPHVLILESTYGTNIHEKREDRESRFTSTVHDIVTRGGRCLIPVFALGRAQELLLILDEYWGAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNERIRRQISVNNPFVFKHISNLKGIDHFDDVGPCVILASPGMMQSGLSRELFESWCSDPKNGCIVAGYCVEGTLAKHILSEPEEVASMNGQKLPLKMQVNYISFSAHTDYKQTSGFIRELKPPHVILVHGEANEMSRLKSALIREYEADPSTKIDFYNPRNTVSVDLFFRGEKMAKVMGSLAVDPPIQEHRVSGILVKRNFNYHILSPSDLPKYTDMTTSVVTQRQSIYYSGSFQLLQFMISQFGCDVTTPKEKEKKKKYIRVFDSIDVIHEDKMITLEWIASPVNDMYADAVLSAILQAESLDTPQYIPANARVDKMHFKECCIELLQDMFGEESVPKTFSGDKFGVIVHNKKALIDLKTLEVSCNEDETFGKIVETAITKLHESLV 676          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000000010 (supercontig:LSalAtl2s:LSalAtl2s1003:5798:7615:-1 gene:EMLSAG00000000010 transcript:EMLSAT00000000010 description:"augustus_masked-LSalAtl2s1003-processed-gene-0.0")

HSP 1 Score: 332.413 bits (851), Expect = 2.430e-105
Identity = 192/552 (34.78%), Postives = 300/552 (54.35%), Query Frame = 0

Query:   22 DKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIE-------ADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVS-NIATEQMLYSEQDLETSMEKIDTLNFHEEKEVN-GIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRN----TVAVDLYFRGEKMAKVVGNLAME---KPIDDHR---VSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQ-----LLQFLVSQLSGDL 549
            +++ + PLGAGQ+VGRSC ++    K ++LDCG+H G N     P    IE          +D ++ISHFHLDH GALP+  +   + G  +MTH TKAI   LL D  +V+     E   ++   ++  M+K+  ++ H+   V+  ++  AY AGHVLGAAMF +++    ++YTGD++   DRHL AA +   RPD+LI E+TY T + + +  RE  F   +H+ V RGG+ LIPVFALGRAQEL ++L+ YW       ++PI++++ L +K    Y+ F+   N+KIR+     N F FK I  L    +  + GP V+ A+PGM+  GLS  +FE WCT+  N  I+ GYCV GT+   IL+   ++    G+ + +K+ V Y+SFSAH D K     I   +P +V+LVHGE  +M  LK+ +  E+       +  + P N    T++  +   G   + ++    ++   KP D  R   + GV+V ++    IL    + +   +   T+    +V +    Q     + Q L + +S DL
Sbjct:    3 EEIRVTPLGAGQDVGRSCLLVSIGGKNLMLDCGMHMGYNDERRFPDFSFIEDTPGAPLTPHLDAVIISHFHLDHCGALPYMTEMVGYSGPIYMTHPTKAIAPILLEDMRRVAVERKGESNFFTSAMIKECMKKVVAVHLHQVIRVDESLEIKAYYAGHVLGAAMFQVKVGNRSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTVRDSKRCRERDFLKKVHDCVERGGKVLIPVFALGRAQELCILLETYWDRMN--LKVPIFFSTGLTEKATNYYKMFITWTNEKIRKTFVERNMFDFKFIKPLDRA-YIQNPGPMVVFATPGMLHGGLSLAIFEEWCTNELNMIIMPGYCVAGTVGHKILNGTRKLEFSKGKTVEVKMSVQYMSFSAHADAKGIMQLISYCEPKNVMLVHGEQAKMEFLKAKIESEH------GVQCFMPANGETATISCPITLEGCVSSSIIKKEHLKYALKPPDPKRARLLHGVIVMKDETLSILDPEKIAEEFGIQSHTIRYTLNVPFRNEVQSPLSAVAQKLYNAISRDL 545          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000011843 (supercontig:LSalAtl2s:LSalAtl2s831:281816:286361:1 gene:EMLSAG00000011843 transcript:EMLSAT00000011843 description:"snap_masked-LSalAtl2s831-processed-gene-2.5")

HSP 1 Score: 140.969 bits (354), Expect = 4.177e-35
Identity = 101/366 (27.60%), Postives = 176/366 (48.09%), Query Frame = 0

Query:   28 PLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHE----EKEVNGIKFWAYNAGHVLGAAMFMIEIAGVR-VLYTGDFSREEDRHLMAAELPTL-RPDVLIVEA-TYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPE-LHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDI-GPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSE 382
            PL  G+  G  C++LE  D   LLD G  P  N         +  A KID +L+S+  LDH GALP+ + K       F T     + +  + D  +      +  L++  +++++ +KI  L +++    + +  GI      AGH++G  ++ I   G   ++Y  DF+ +++RHL   +L  L RP +LI +A   G H   +R  R+ +  + I + +   G  LI     GR  EL  ++D+ W      L    +   ++ +   +   ++ +  M++K+ +      +NPF FKH+     ++  + +  P V+LAS   M+SG SRELF  WCT+ KN  I+       TLA  ++++
Sbjct:    9 PLSGGRSEGPHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKKV--ASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYDVYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIPAGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILITDAFNIGCH-QLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMVDQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRNNPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPKNSIILTSRSPANTLAYDLMTK 371          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. L. salmonis genes
Match: EMLSAG00000011315 (supercontig:LSalAtl2s:LSalAtl2s77:664263:677061:-1 gene:EMLSAG00000011315 transcript:EMLSAT00000011315 description:"maker-LSalAtl2s77-augustus-gene-6.22")

HSP 1 Score: 78.9518 bits (193), Expect = 2.971e-15
Identity = 94/475 (19.79%), Postives = 176/475 (37.05%), Query Frame = 0

Query:   37 RSCHILEFKDKRVLLDCGIH-------------------------PGLNGMD---------------------ALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIK------------------------------VSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNG-IKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVS-NPFVFKHISNLKGIDHFDDI----------GPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKP 423
            + C++L FK  R++LDCG+                          PG+  M+                       P   + +   ID++LIS++      ALP+  +++ FKG  +MT  T  I R  + + I+                              VSN  + + +Y+ + +E+S+ K+  + + E+K+V G +     ++G+ LG++ ++I     ++ Y    S          ++P    D LI+ +   T   +  +     F  ++ E    GG  L+P +  G   +L   L     AH  L  IP+Y+ S +A   +A        ++   + ++ +   PF    ++    +  F  +           PC++      ++ G      E W ++S N           T+     S P E      Q  PL ++V +       ++ Q    IR LKP
Sbjct:  756 KPCYVLNFKGVRIMLDCGLDLSTALHYLPIPLVHSQKLSNLGNYVPGIENMNFCEGELKDCNGKIFVDSSPEFCTPHSGLFDFADIDVILISNYTC--MLALPYVTEESGFKGIVYMTEPTLHIGRLFMEETIEYMERTALSSRHSSSGSWKDILHALPPPLCDVSNPRSWKRIYNRKQMESSLSKVQLMGYSEKKDVFGLLTVSPVSSGYCLGSSNWIISSGFEKIGYVSGTSTLTTHPRPLNQIPLRNVDCLIMTSLTQTPT-QMPDPMIGEFCKSVVETTRLGGNVLVPCYPSGITYDLFECLAGQMDAH-SLCTIPMYFVSPVADSSLAYSNIMAEWLSQSKQNKVYLPEEPFPHGGLARNGRLKSFRTMHDENFSNEYRQPCIMFCGHPSLRFGEVIHFIELWGSNSNN-----------TIVFTEPSFPYEAALAPFQ--PLHMKVIHCPIDTSLNFSQAKKLIRDLKP 1213          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74636942|sp|Q6CUI5.1|YSH1_KLULA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0
Identity = 294/667 (44.08%), Postives = 439/667 (65.82%), Query Frame = 0

Query:   20 EQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNI-------ATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPEL---HEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQR--LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEA--DPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGN--------------LAMEKPI---------------------DDHRVSGVLV--KRNFNYHILAANDLQK-YTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLEL-----------VDTEQESKKI------IRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAK 615
            ++D +    LG   EVGRSCHIL++K K ++LD GIHP   G+ +LP+ D  +   IDLLLISHFHLDHA +LP+ +Q+T F+G+ FMTH TKAIYRWLL+DF+KV++I       ++   LYS++DL  S ++I+T+++H   EVNGIKF A++AGHVLGAAMF IEIAGVRVL+TGD+SRE DRHL +AE+P    DV+IVE+T+GT  HE R++RE + T  IH +V++GGR L+PVFALGRAQE++LILDEYW  H E     ++PI+YAS+LAKKCM+V+QT+VN MND IR++   + +NPF+FK+IS LK +D F+D GP V+LASPGM+Q+GLSR++ E WC + KN  +V GY VEGT+AK++L EPE I +++     +P + QV  I+F+AH D+++   FI  +   ++ILVHGE+N M RLKSAL+  + +  D +  +  +NPRN V VD+ F+  K+A+ VG               L  EK I                     ++  VSG+LV  ++NF+  +++ +DL++ Y  ++ + +T+RQ+V+ +   +L+ + + Q+ GD+++           ++ E +++KI      I+  G + +     + TL+W  + ++D  AD+V++ +L  ES   P  I  ++K
Sbjct:   10 DKDHLRFFSLGGSNEVGRSCHILQYKGKTLMLDAGIHPAHQGLASLPYYDEFDLSTIDLLLISHFHLDHAASLPYVMQRTNFRGRVFMTHPTKAIYRWLLNDFVKVTSIGDSPGQDSSNDNLYSDEDLAESFDRIETIDYHSTMEVNGIKFTAFHAGHVLGAAMFQIEIAGVRVLFTGDYSREVDRHLNSAEVPPQSSDVIIVESTFGTATHEPRQNRERKLTQLIHTVVSKGGRVLLPVFALGRAQEIMLILDEYWQNHKEELGNGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFKDSQTNPFIFKNISYLKNLDEFEDFGPSVMLASPGMLQNGLSRDILEKWCPEEKNLVLVTGYSVEGTMAKYLLLEPEAIPSVHNPEITIPRRCQVDEITFAAHVDFRENLEFIELIGASNIILVHGESNPMGRLKSALLSNFSSLKDTENEVHVFNPRNCVFVDIEFKDVKVARAVGKIIEDLDEFITEEDALKNEKRITEIHEEDPETEESKTEIVKEENEKIVSGILVSDEKNFDLSLVSLSDLREHYQQLSTTVLTERQTVHLDCKSELVYWHICQMFGDVDVYIDEENVSLKNINPEFKTRKIKKGELEIKIMGDVILNIVDNVATLQWTQNVISDSVADSVMAILLSVES--APASIKMSSK 674          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74644951|sp|Q06224.1|YSH1_YEAST (RecName: Full=Endoribonuclease YSH1; AltName: Full=Yeast 73 kDa homolog 1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 294/653 (45.02%), Postives = 423/653 (64.78%), Query Frame = 0

Query:   29 LGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIAT--------EQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPEL---HEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQR--LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEA--DPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAME-----------------KPI-------------------DDHR---VSGVLVK--RNFNYHILAANDLQK-YTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVD-----TEQE--------------SKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES 603
            LG   EVGRSCHIL++K K V+LD GIHP   G+ +LPF D  +  K+D+LLISHFHLDHA +LP+ +Q+T F+G+ FMTH TKAIYRWLL DF++V++I +        ++ L+S++DL  S +KI+T+++H   +VNGIKF A++AGHVLGAAMF IEIAG+RVL+TGD+SRE DRHL +AE+P L  +VLIVE+T+GT  HE R +RE + T  IH  V RGGR L+PVFALGRAQE++LILDEYW+ H +     ++PI+YAS+LAKKCM+V+QT+VN MND IR++   + +NPF+FK+IS L+ ++ F D GP V+LASPGM+QSGLSR+L E WC + KN  ++ GY +EGT+AK I+ EP+ I ++N     +P + QV  ISF+AH D+++   FI  +  P++ILVHGEAN M RLKSAL+  + +    D  +  +NPRN V VDL F+G K+AK VGN+  E                 +PI                   ++H+   VSG+LV   +NF    L+ +DL++ + D++ + + +RQSV      +L+ + + Q+ G+ E++      T QE               K I++  G I +     +  +EW    +ND  AD++++ ++  +S
Sbjct:   14 LGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFDLSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHSTVDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREVDRHLNSAEVPPLSSNVLIVESTFGTATHEPRLNRERKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELGGGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFIFKNISYLRNLEDFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMAKFIMLEPDTIPSINNPEITIPRRCQVEEISFAAHVDFQENLEFIEKISAPNIILVHGEANPMGRLKSALLSNFASLKGTDNEVHVFNPRNCVEVDLEFQGVKVAKAVGNIVNEIYKEENVEIKEEIAAKIEPIKEENEDNLDSQAEKGLVDEEEHKDIVVSGILVSDDKNFELDFLSLSDLREHHPDLSTTILRERQSVRVNCKKELIYWHILQMFGEAEVLQDDDRVTNQEPKVKEESKDNLTNTGKLILQIMGDIKLTIVNTLAVVEWTQDLMNDTVADSIIAILMNVDS 666          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74637743|sp|Q6FUA5.1|YSH1_CANGA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0
Identity = 283/641 (44.15%), Postives = 423/641 (65.99%), Query Frame = 0

Query:   29 LGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQM------LYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPE---LHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQI--AVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQR--LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDT--NIDFYNPRNTVAVDLYFRGEKMAKVVGNLAME---------KPIDDHR--------------------------VSGVLV--KRNFNYHILAANDLQK-YTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELV----------DTEQESKK---IIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAES 603
            LG G EVGRSCHI++FK K ++LD GIHP   GM +LPF D  +   +D+LLISHFHLDHA +LP+ +QKT FKG+ FMTH TKAIYRWLL DF++V++I ++        LYS +DL  S +KI+T+++H   +VNGIKF A++AGHVLGAAMF IEIAG+RVL+TGD+SRE DRHL +AE+P L  D+LIVE+T+GT  HE R  RE + T  IH  VN+GGR L+PVFALGRAQEL+LILDEYW+ H E    ++IPI+YAS+LA+KC++V+QT+VN MND IR++   + +NPF+FK+I+ +K +D F D GP V+LASPGM+Q+GLSR+L E WC D KN  ++ GY VEGT+AK++L EP+ I +++     +P + +V  +SF+AH D+++   FI  +   ++ILVHGE N M RLKSAL+  Y +   T   +  +NPRN   +D+  +G K+AK VGN+  E         KP +D                            +S +LV  ++NF+ ++++ +DL++ + +++ + + +RQ++  +   +L+ + + Q+ GD+ ++          +T+ E+ +   +++  GAI +  +     LEW    ++D  AD++++ ++  +S
Sbjct:   15 LGGGNEVGRSCHIIQFKGKTIMLDAGIHPAYQGMASLPFYDDFDLSIVDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLRDFVRVTSIGSQSSNAEDDNLYSNEDLIESFDKIETIDYHSMIDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREIDRHLNSAEVPPLPSDILIVESTFGTATHEPRLHREKKLTQLIHSTVNKGGRVLMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLARKCLSVFQTYVNMMNDNIRKKFRDSQTNPFIFKNIAYIKNLDEFQDFGPSVMLASPGMLQNGLSRDLLERWCPDEKNLVLITGYSVEGTMAKYLLLEPDTIPSVSNPEVTIPRRCRVEELSFAAHVDFQENLEFIEQINASNIILVHGEPNPMGRLKSALLSNYASFKGTEDEVHVHNPRNCYELDIECKGVKVAKAVGNIVDEIKRTEEEVVKPENDAGQSKEGIEEFTGKTQDVRKDAEGEGAIISSILVSDEKNFDLNLVSLSDLREHHPELSTTVIRERQTIQVDCKKELIYWHICQMFGDVSVLIDDDNVTNTKETKLETSRGMLVLQIMGAIRLTVQHNKAILEWTQGLISDTIADSIIAILMSVDS 655          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|218511903|sp|Q6BMW3.2|YSH1_DEBHA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0
Identity = 258/500 (51.60%), Postives = 349/500 (69.80%), Query Frame = 0

Query:   13 VESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIAT----------------EQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVS------NPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEI-TAMNGQ-RLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDT--NIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEK 486
            V+S  +D  D      LG   EVGRSCHI+E+K+K ++LD G+HPGL G+ +LPF D  +  K+D+LL+SHFHLDHA +LP+ +Q T F G+ FMTHATKAIYRWLLSDF+KV++I                     LY++ DL  S ++I+T+++H   E++GI+F AY+AGHVLGA M+ IEI G++VL+TGD+S EEDRHL  AE+P ++PD+LI E+T+GT  HE R ++E R T+ IH  + +GGR L+PVFALGRAQELLLIL+EYW+ + +L  I IYYASSLA+KCMAVYQT+ N MND IR   + +      NPF FK I ++K +D F D GPCV++ASPGM+Q+G+SREL E W  D KN  I+ GY VEGT+AK +L+EP  I +AMN    +P +L +  ISF+AH D++Q + FI  + P  +ILVHGE+N M RLKSAL+ +Y +   T   +  +NPRN   V +  +G K+AKV+G LA E+
Sbjct:    3 VDSQPADGTDDFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYDEYDLSKVDILLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVKVTSIGGGSDARLNNSDPNANTGSSNLYTDDDLMRSFDRIETIDYHSTIELDGIRFTAYHAGHVLGACMYFIEIGGLKVLFTGDYSSEEDRHLQVAEVPPIKPDILITESTFGTATHEPRLEKETRMTNIIHSTLLKGGRILMPVFALGRAQELLLILEEYWSLNDDLQNINIYYASSLARKCMAVYQTYTNIMNDSIRLTTSATNSSKKQNPFQFKFIKSIKNLDKFQDFGPCVVVASPGMLQNGVSRELLERWAPDPKNAVIMTGYSVEGTMAKDLLTEPHTIQSAMNSDMTIPRRLSIEEISFAAHVDFQQNASFIEKVNPSKIILVHGESNPMGRLKSALLSKYASRKGTEQEVKVFNPRNCDEVTIGIKGLKVAKVLGTLAEEQ 502          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74672067|sp|Q4WRC2.1|YSH1_ASPFU (RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1)

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 298/703 (42.39%), Postives = 417/703 (59.32%), Query Frame = 0

Query:    1 MALKR-AHSPGFIVESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQ----MLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPT-LRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRR--------------QIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQR-------------------LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPI---DDHRV-SGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYY------------EGSFQLLQFLVSQLSGDLE-----LVDTEQESK-------------KIIRAFGAIDIVHEKRM--VTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAKVDMMHFKECLLEM 628
            MA KR A +    V+    D  D++    LG G EVGRSCHI+++K K V+LD G+HP   G  ALPF D  +   +D+LLISHFH+DH+ ALP+ L KT FKG+ FMTHATKAIY+WL+ D ++VSN A+       LY+E D  +++  I+T++F+    VN I+   + AGHVLGAAMF+I IAG+ +L+TGD+SREEDRHL+ AE+P  ++ DVLI E+T+G   +  R +RE     +I  I+NRGGR L+PVFALGRAQELLLILDEYW  HPEL +IPIYY  + A++CM VYQT++ AMND I+R              + A + P+ FK + +L+ ++ FDD+G CV+LASPGM+Q+G SREL E W  + +NG ++ GY VEGT+AK +L+EPE+I A+  +                    +P +  V  ISF+AH D  +   FI  +  P VILVHGE ++M RLKS L+    AD    +  Y P N   V + FR +K+AKVVG LA   P    DD R+ SGVLV+  F+  ++A +DL++Y  +T +T+T +Q +              EG+F  ++ L S     ++      V+ EQE K             +     G + I +  R   V LEW  + +ND  ADAV++ +L  ES   P  +  +AK+   H     LE+
Sbjct:    1 MATKRKASALNAAVDDEPVDPSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTVNSIRITPFPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPAEVPKGIKIDVLITESTFGISTNPPRLEREAALMKSITGILNRGGRVLMPVFALGRAQELLLILDEYWETHPELQKIPIYYIGNTARRCMVVYQTYIGAMNDNIKRLFRQRMAEAEASGDKSASAGPWDFKFVRSLRSLERFDDVGGCVMLASPGMLQTGTSRELLERWAPNERNGVVMTGYSVEGTMAKQLLNEPEQIPAVMSRSAGGVSRRGLAGTDEEQKIMIPRRCTVDEISFAAHVDGVENRNFIEEVAAPVVILVHGEKHQMMRLKSKLL-SLNADKAVKVKVYTPANCDEVRIPFRKDKIAKVVGKLAQVAPPSDQDDGRLMSGVLVQNGFDLSLMAPDDLREYAGLTTTTITCKQHITLSSASMDLIRWALEGTFGAIEELGSNERSKVKEESTKAVNGEQEIKEEPADEEIPMEETQTYLVMGCVLIRYHSRTREVELEWEGNMMNDGVADAVMAVLLTVES--SPASVKQSAKLKHHHHHHSDLEL 700          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|338819805|sp|P0CM89.1|YSH1_CRYNB (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1 >gi|338819806|sp|P0CM88.1|YSH1_CRYNJ RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 525.013 bits (1351), Expect = 2.376e-176
Identity = 263/605 (43.47%), Postives = 391/605 (64.63%), Query Frame = 0

Query:    3 LKRAHSPGFIVESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFK---GKCFMTHATKAIYRWLLSDFIKVS--NIATEQMLYSEQDLETSMEKIDTLNFHEEKEV-NGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIA-VSNPFVFKHISNLKGIDHF-DDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVL 599
             K A  P   V     ++   +TI  LGAGQEVGRSC ++E + K+++ D G+HP   G+ ALPF+D ++   +D +LI+HFH+DHA ALP+ ++KT FK   GK +MTHATKAIY   + D ++++  N  T   LY E D+++S +    +++H++  +  G++F  Y+AGHVLGA+MF+IEIAG+++LYTGD+SREEDRHL+ AE+P ++PDV+I E+T+G H    R+++E +FT+ +  IV RGGRCL+P+ + G  QEL L+LDEYW  HPEL  IP+Y+ASSL ++ M VY+T+V+ MN  IR + A   NPF F+ +  LK      ++ GPCVI++SP  M  GLSR+L E W  DSKNG IV GY +EGT+A+ +LSEP+ I ++ G  +P +L V  ISF AH DY Q S FI+ +   HV+LVHGEA++M RL++AL   Y A     I+ + P+N   + L FR E+M K +G+LA  +P     V G+LV ++F+Y +L+  DL  +T ++ ST+ Q+Q V     + ++++ +  + G++E    E+     I   G   +      V L W +S  NDM AD+ L+ +L
Sbjct:    8 FKPAPQPTVQVLQPPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDELDWSTVDAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAGHVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKEKEEQFTTLVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQRGMRVYKTYVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFGLSRDLLEEWAPDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGNVPRRLTVKEISFGAHVDYAQNSKFIQEIGAQHVVLVHGEASQMGRLRAALRDTYAAK-GQEINIHTPKNCEPLTLTFRQERMVKAIGSLAATRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQGVAISVDWAVVRWYLEGMYGEVEEGVEEEGKAAFIIMNGVQVVQISPTAVELRWKSSSSNDMIADSALALLL 611          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74598547|sp|Q5BEP0.1|YSH1_EMENI (RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1)

HSP 1 Score: 526.168 bits (1354), Expect = 2.280e-175
Identity = 279/677 (41.21%), Postives = 404/677 (59.68%), Query Frame = 0

Query:   13 VESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQ----MLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPT-LRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRR--------------QIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEI-------------TAMNGQ------RLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEK-PIDDHR-----VSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYY------------EGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEK------------------RMVTLEWIASPVNDMYADAVLSAVLQAESIEKPRYIPTNAK 615
            V+    D  D++    LG G EVGRSCHI+++K K V+LD G+HP   G  ALPF D  +   +D+LLISHFH+DH+ ALP+ L KT FKG+ FMTHATKAIY+WL+ D ++V+N A+       LY+E D  +++  I+T++F+    +N I+   Y AGHVLGAAMF+I IAG+ +L+TGD+SREEDRHL+ A +P  ++ DVLI E+T+G   +  R +RE     +I  ++NRGGR L+PVFALGRAQELLLIL+EYW  HPEL +IPIYY  + A++CM VYQT++ AMND I+R              +   + P+ FK++ +L+ ++ FDD+G CV+LASPGM+Q+G SREL E W  + +NG ++ GY VEGT+AK +L+EP++I             T MNG        +P +  V  ISF+AH D  +   FI  +  P VILVHGE ++M RLKS L+    A+    +  Y P N   V + FR +K+AKVVG LA    P D+       ++GVLV+  F+  ++A +DL++Y  +  +T+T +Q +              EG+F  ++ + +    + E   +E E K+ ++     +I  EK                  R V L+W  + +ND  ADAV++ +L  ES   P  +  +AK
Sbjct:   13 VDDEPVDPSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPYPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPATVPRGVKIDVLITESTFGISSNPPRLEREAALMKSITGVLNRGGRVLMPVFALGRAQELLLILEEYWETHPELQKIPIYYIGNTARRCMVVYQTYIGAMNDNIKRLFRQRMAEAEASGDKSVSAGPWDFKYVRSLRSLERFDDVGGCVMLASPGMLQTGTSRELLERWAPNERNGVVMTGYSVEGTMAKQLLNEPDQIHAVMSRAATGMGRTRMNGNDEEQKIMIPRRCTVDEISFAAHVDGVENRNFIEEVSAPVVILVHGEKHQMMRLKSKLL-SLNAEKTVKVKVYTPANCEEVRIPFRKDKIAKVVGKLAQTTLPTDNEDGDGPLMAGVLVQNGFDLSLMAPDDLREYAGLATTTITCKQHITLSSASMDLIKWALEGTFGAIEEIGTDEDAEKEDQQSESEEKQRMKEEADEEIPMEKPQAYLVMGCVVIRYHPRTREVELQWEGNMMNDGIADAVMAVLLTVES--SPASVKQSAK 686          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|442570104|sp|Q4IPN9.2|YSH1_GIBZE (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 521.546 bits (1342), Expect = 3.303e-174
Identity = 277/661 (41.91%), Postives = 398/661 (60.21%), Query Frame = 0

Query:   19 DEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIA---TEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPT-LRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRR--------------QIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITA-----MNGQR-----------LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLA-MEKPIDDHR--------VSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGS-FQLLQFLVSQLSGDLE-------------------LVDTEQESKK---------IIRAF---GAIDIVHEKR-MVTLEWIASPVNDMYADAVLSAVLQAES 603
            D  D++    LG G EVGRSCHI+++K K V+LD G HP  +G+ ALPF D  +   +D+LLISHFH+DHA +LP+ L KT F+G+ FMTH TKAIY+WL+ D ++V N +   T Q +Y+EQD   +  +I+ +++H    ++ I+   Y AGHVLGAAMF+IEIAG+ + +TGD+SRE+DRHL++AE+P  ++ DVLI E+TYG   H  R +RE     +I  I+NRGGR L+PVFALGRAQELLLILDEYW  H +  + PIYYAS+LA+KCM +YQT+V AMND I+R                    P+ FK+I +LK +D FDD+G CV+LASPGM+Q+G+SREL E W    KNG I+ GY VEGT+AK I+ EP++I A     M G R           +P +  V   SF+AH D  +   FI  ++ P VILVHGE + M RLKS L+    A+    +  Y+PRN   + + F+ +K+AKVVG LA ++ P   H         V+GVLV+ +F   ++A  DL++Y  +  +T+T +Q +    +   L+++ +    G++E                   + D + ESK+         ++ A+   G + + +     V LEW  + +ND  AD+V++ +   ES
Sbjct:   20 DPSDELMFLCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYDGLAALPFYDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHPTKAIYKWLIQDSVRVGNTSSNPTTQPVYTEQDHLNTFPQIEAIDYHTTHTISSIRITPYPAGHVLGAAMFLIEIAGLNIFFTGDYSREQDRHLVSAEVPKGVKIDVLITESTYGIASHVPRLEREQALMKSITSILNRGGRVLMPVFALGRAQELLLILDEYWGKHADFQKYPIYYASNLARKCMLIYQTYVGAMNDNIKRLFRERMAEAEASGDGAGKGGPWDFKYIRSLKNLDRFDDVGGCVMLASPGMLQNGVSRELLERWAPSEKNGVIITGYSVEGTMAKQIMQEPDQIQAVMSRSMAGARRMPGGDGEKVLIPRRCSVQEYSFAAHVDGVENREFIEEVQAPVVILVHGEQHNMMRLKSKLL-SLNANKTAKVKVYSPRNCEELRIPFKADKIAKVVGKLACIQPPQSIHPDQTATPPLVTGVLVQNDFKLSLMAPEDLREYAGLNTTTITCKQRLTLSAAGVDLVKWALEGTFGNIEELPEMRRAKNGQNGHADKMITDGDDESKQEDADEEVASLVAAYLVMGCVSVRYRTNGEVELEWEGNMLNDGIADSVMAVLFSVES 679          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74584420|sp|Q59P50.1|YSH1_CANAL (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1)

HSP 1 Score: 518.464 bits (1334), Expect = 1.575e-172
Identity = 286/758 (37.73%), Postives = 442/758 (58.31%), Query Frame = 0

Query:   29 LGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQM----------LYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAV---SNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNG--QRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEA--DPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAME-----KPIDDHRVSG-----------------------------------------------VLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKR-----MVTLEWIASPV-NDMYADAVLS-------------------------AVLQAESIEKPRYIPTNAKVDMMHFKECLLEMLQDMFGE--ESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPE---DDMLQNIIQTAC 681
            LG   EVGRSCHI+E+K+K ++LD G+HP L+G  + P+ D  +  K+D+LLISHFH+DH+ +LP+ +Q++ F+GK FMTHATKAIYRWL+ DF++V++I   +           LY++ D+  S ++I+T+++H   E++GI+F AY+AGHVLGA M+ IEI G++VL+TGD+SREE+RHL AAE+P L+PD+LI E+T+GT   E R + E + T+ IH  + +GGR L+PVFALG AQELLLILDEYW+ + +L  + ++YAS+LAKKCMAVY+T+   MNDKIR   A    SNPF FK+I ++K +  F D+GP V++A+PGM+Q+G+SR+L E W  D KN  I+ GY VEGT+AK +L EP  I +       +P ++ +  ISF+AH D++Q S FI  + P  VILVHG++  M RLKSAL+ +Y +    D  +  YNP+N   + + F+G K+AKV+G+LA E     K I    VS                                                VLV ++FN ++L   DL ++T ++ S V  +  +       L+ + + Q+ G + +++ + E  + +     +D+  ++       +T+EWI   +  D  AD+V++                          V + +S+E  R +  +AK D+    E +  +L+  FG+  + +P     ++  I +    A++D   L+V+C      D ++N+I+  C
Sbjct:  105 LGGCNEVGRSCHIIEYKNKVIMLDSGMHPALSGHASFPYFDEYDISKVDILLISHFHVDHSASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGNSRSEDGGGGEGSNLYTDDDIMKSFDRIETIDYHSTMEIDGIRFTAYHAGHVLGACMYFIEIGGLKVLFTGDYSREENRHLHAAEVPPLKPDILISESTFGTGTLEPRIELERKLTTHIHATIAKGGRVLLPVFALGNAQELLLILDEYWSQNEDLQNVNVFYASNLAKKCMAVYETYTGIMNDKIRLSSASSEKSNPFDFKYIKSIKDLSKFQDMGPSVVVATPGMLQAGVSRQLLEKWAPDGKNLVILTGYSVEGTMAKELLKEPTMIQSATNPDMTIPRRIGIEEISFAAHVDFQQNSEFIEKVSPSKVILVHGDSVPMGRLKSALLSKYASRKGTDQEVKVYNPKNCEELIIGFKGLKIAKVLGSLAEEQLQVLKKIIQDEVSAENSKITELTEEKEEADEIKEDNGETDTTQKPNESSINVLKTGQVVSGVLVSKDFNLNLLQLQDLHEFTQLSTSIVKSKMHLKINADISLMVWHLEQMFGYINVINDDDEEWECV-IMDVVDVFIDRSKGPGLFITVEWINDNLMADSLADSVIAILYSIDSSPASVKLSSQNHNHGDNHIVKKEDSMEIDRPVEAHAKTDIKSRIERIALLLKAQFGDSLKELPE----EKAIIQIGKTVANVDYKRLEVECSSKVLKDRVENVIKRGC 857          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. SwissProt
Match: gi|74630409|sp|Q8WZS6.1|YSH1_NEUCR (RecName: Full=Endoribonuclease ysh-1; AltName: Full=mRNA 3'-end-processing protein ysh-1)

HSP 1 Score: 514.227 bits (1323), Expect = 4.443e-171
Identity = 280/681 (41.12%), Postives = 405/681 (59.47%), Query Frame = 0

Query:    1 MALKRAHSPGFIVESTSSDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATE---QMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPT-LRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRR----QIAVS----------NPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITA-----MNGQR-----------LPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKP----------------IDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVY------------YEGSFQLLQFL---------VSQLSGDLELVDTEQE---SKKIIRAF---GAIDIVHEKR-MVTLEWIASPVNDMYADAVLSAVLQAES 603
            MA KR  S          D  D++    LG G EVGRSCHI+++K K V+LD G HP  +G+ ALPF D  +   +D+LLISHFH+DHA +LP+ L KT F+G+ FMTHATKAIY+WL+ D ++V N ++     ++Y+E+D   +   I+ ++++    ++ I+   Y AGHVLGAAMF+IEIAG+++ +TGD+SREEDRHL++A++P  ++ DVLI E+TYG   H  R +RE     +I  I+NRGGR L+PVFALGRAQELLLILDEYW  H E  + PIYYAS+LA+KCM VYQT+V +MND I+R    ++A S           P+ F+ I +LK +D F+D+G CV+LASPGM+Q+G+SREL E W    KNG I+ GY VEGT+AK +L EPE+I A     + G R           +P +  V   SF+AH D  +   FI  +  P VILVHGE + M RLKS L+    A  +  +  ++PRN   + + F+ +K+AKVVG LA   P                 +   ++GVLV+ +F   ++A  DL++Y  +T +T+  +Q +              EG+F  ++ L         V   +GD ++ + ++E      ++ A+   G + + +     V LEW  + +ND  ADAV++ +L  ES
Sbjct:    1 MASKRKASAMATEPEEPVDPADELMFLNLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYDGLAALPFFDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQDSVRVGNTSSNPQSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGHVLGAAMFLIEIAGLKIFFTGDYSREEDRHLISAKVPKGVKIDVLITESTYGIASHIPRPEREQALMKSITGILNRGGRVLMPVFALGRAQELLLILDEYWGKHAEYQKYPIYYASNLARKCMLVYQTYVGSMNDNIKRLFRERLAESESSGDGAGKGGPWDFRFIRSLKSLDRFEDVGGCVMLASPGMLQNGVSRELLERWAPSEKNGVIITGYSVEGTMAKQLLQEPEQIQAVMSRNIAGARRGPGGDAEKVMIPRRCTVQEFSFAAHVDGVENREFIEEVAAPVVILVHGEVHNMMRLKSKLL-SLNATKEHKVKVFSPRNCEELRIPFKTDKVAKVVGKLASIPPSLKEAKTGHDGPLPSSTEPQLITGVLVQNDFKMSLMAPEDLREYAGLTTTTIACKQRLKLSAAGIDLIKWGLEGTFGAVEELPEVKPKLEIVKSENGDTKMEEADEELPHGDDVVAAYLVMGCVTVRYRASGEVELEWEGNMLNDGIADAVMAVLLGIES 680          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|987921609|ref|XP_015436983.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Dufourea novaeangliae] >gi|1016171138|gb|KZC14174.1| Cleavage and polyadenylation specificity factor subunit 3 [Dufourea novaeangliae])

HSP 1 Score: 1083.94 bits (2802), Expect = 0.000e+0
Identity = 499/672 (74.26%), Postives = 591/672 (87.95%), Query Frame = 0

Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE+VD      K +R F  +D+  + ++ T+EWIA+PVNDMYAD+VL+A+LQAE +++ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVVD-----DKKLRVFKNVDVTIDGKIATMEWIATPVNDMYADSVLTAILQAEMMDQPPKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|751229559|ref|XP_011168248.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Solenopsis invicta] >gi|322786053|gb|EFZ12664.1| hypothetical protein SINV_01905, partial [Solenopsis invicta])

HSP 1 Score: 1083.55 bits (2801), Expect = 0.000e+0
Identity = 499/672 (74.26%), Postives = 590/672 (87.80%), Query Frame = 0

Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ H ELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P    ++SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G LE+VD      K +R F  +D+  + ++VT+EW+A+PVNDMYAD+VL+A+LQAE +E+ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   13 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPSTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPRPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGSLEVVD-----DKKLRVFKNVDVTIDGKIVTMEWVATPVNDMYADSVLTAILQAEIMEQSPKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 679          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1080066061|ref|XP_018575214.1| (cleavage and polyadenylation specificity factor 73 [Anoplophora glabripennis])

HSP 1 Score: 1083.17 bits (2800), Expect = 0.000e+0
Identity = 496/672 (73.81%), Postives = 596/672 (88.69%), Query Frame = 0

Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEKP-RYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D++ I PLGAGQEVGRSC ++EFK K+++LDCGIHPGL+GMDALPFVD+IEAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLE SM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+PT+ PDVLI E+TYGTHIHEKREDRE RFT+ +H+IVNRGGRCLIPVFALGRAQELLLILDEYW+ HPELH+IPIYYASSLAKKCMAVYQT++NAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM+RLK+AL REYE DP+T I  +NPRNT AV+LYFRGEK AKV+GNLA+++P     +SG+LVKRNFNYHIL+A+DL KYTD+++S + QRQS++Y G+   L++L+SQ++G LE +DT+++    +RAF AIDI  + ++VTLEW+A+PVNDMYADA+++A+LQA+ +E P + + T+ KVD MHFKECL+EMLQDMFGE+SVP  F G++  +TV  K+A ID+ +L+VKCP D+  Q I+ TA +KL  SL
Sbjct:   13 AEESDQLIIMPLGAGQEVGRSCIMIEFKGKKIMLDCGIHPGLSGMDALPFVDLIEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTEADLEASMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPTVHPDVLITESTYGTHIHEKREDRESRFTNLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHDIPIYYASSLAKKCMAVYQTYINAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMVGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMNRLKAALQREYEDDPNTTIHLHNPRNTHAVELYFRGEKTAKVMGNLAIDEPKPGRTLSGILVKRNFNYHILSADDLSKYTDLSMSQIMQRQSIHYSGNMGALRYLISQVAGLLESIDTDKK----MRAFNAIDITLDHKIVTLEWVANPVNDMYADAIVAAILQADLLEVPIKNMSTSVKVDRMHFKECLIEMLQDMFGEDSVPKIFKGEKLYVTVNDKRADIDLSNLEVKCPSDETFQQIVHTAVTKLYQSL 680          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|1068410897|ref|XP_018051823.1| (PREDICTED: uncharacterized protein LOC108689541 [Atta colombica])

HSP 1 Score: 1083.17 bits (2800), Expect = 0.000e+0
Identity = 496/672 (73.81%), Postives = 589/672 (87.65%), Query Frame = 0

Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK K+++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFL KT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK++ GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW+ H ELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P     +SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G LE+VD      K +R F  +D+  + +++T+EWIA+PVNDMYAD+VL+A+LQAE +++ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +LDV   +D+  Q I+QTA +KL  SL
Sbjct: 1137 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLLKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDMFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPRPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGHLEVVD-----DKKLRIFKNVDVTIDGKIITMEWIATPVNDMYADSVLTAILQAEIMDQSPKVLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLDVTS-KDETFQQIVQTAVTKLHQSL 1802          

BLAST of cleavage and polyadenylation specificity factor subunit 3 vs. nr
Match: gi|749784937|ref|XP_011146254.1| (PREDICTED: cleavage and polyadenylation specificity factor 73 [Harpegnathos saltator] >gi|307199387|gb|EFN80012.1| Cleavage and polyadenylation specificity factor subunit 3 [Harpegnathos saltator])

HSP 1 Score: 1083.17 bits (2800), Expect = 0.000e+0
Identity = 499/672 (74.26%), Postives = 591/672 (87.95%), Query Frame = 0

Query:   18 SDEQDKMTIRPLGAGQEVGRSCHILEFKDKRVLLDCGIHPGLNGMDALPFVDMIEADKIDLLLISHFHLDHAGALPWFLQKTTFKGKCFMTHATKAIYRWLLSDFIKVSNIATEQMLYSEQDLETSMEKIDTLNFHEEKEVNGIKFWAYNAGHVLGAAMFMIEIAGVRVLYTGDFSREEDRHLMAAELPTLRPDVLIVEATYGTHIHEKREDREHRFTSTIHEIVNRGGRCLIPVFALGRAQELLLILDEYWAAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNDKIRRQIAVSNPFVFKHISNLKGIDHFDDIGPCVILASPGMMQSGLSRELFESWCTDSKNGCIVAGYCVEGTLAKHILSEPEEITAMNGQRLPLKLQVSYISFSAHTDYKQTSGFIRALKPPHVILVHGEANEMSRLKSALIREYEADPDTNIDFYNPRNTVAVDLYFRGEKMAKVVGNLAMEKPIDDHRVSGVLVKRNFNYHILAANDLQKYTDMTISTVTQRQSVYYEGSFQLLQFLVSQLSGDLELVDTEQESKKIIRAFGAIDIVHEKRMVTLEWIASPVNDMYADAVLSAVLQAESIEK-PRYIPTNAKVDMMHFKECLLEMLQDMFGEESVPTTFSGDRFEITVESKKAHIDIGSLDVKCPEDDMLQNIIQTACSKLKLSL 688
            ++E D ++IRPLGAGQEVGRSC +LEFK KR++LDCGIHPGL+GMDALPFVD++EAD+IDLLLISHFHLDH GALPWFLQKT+FKG+CFMTHATKAIYRWLLSD+IKVSNIATEQMLY+E DLETSM+KI+T+NFHEEK+V GIKFWAYNAGHVLGAAMFMIEIAGV++LYTGDFSR+EDRHLMAAE+P + PDVLI E+TYGTHIHEKREDRE RFT+ +HEIVNRGGRCLIPVFALGRAQELLLILDEYW  H ELHEIPIYYASSLAKKCMAVYQT+VNAMNDKIRRQIA++NPFVFKHISNLKGIDHF+DIGPCV++ASPGMMQSGLSRELFESWCTD+KNG I+AGYCVEGTLAK ILSEPEEIT M+GQ+LPLK+ V YISFSAHTDY+QTS FIR LKPPHV+LVHGE NEM RLK+AL REYE DP+T ++ +NPRNTVAV+LYFRGEK AKV+G LAME P    ++SGVLVKRNFNYH+LA  DL KYTDM++S V QRQSVY+  S  +L+ L++Q++G+LE++D      K +R F  +D+  + ++VT+EWIA+PVNDMYAD+VL+A+LQAE +++ P+ +P   K+D MHFKECL+EMLQ+MFGE+SVP  F G++  +TV+ KKAHID+ +L+V   ED+  Q I+QTA +KL  SL
Sbjct:   12 AEESDLLSIRPLGAGQEVGRSCIMLEFKGKRIMLDCGIHPGLSGMDALPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKVSNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRGGRCLIPVFALGRAQELLLILDEYWGQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKIRRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVIIAGYCVEGTLAKGILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPHVVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAMETPKPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQIAGNLEVID-----DKKLRVFKNVDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEIMDQSPKMLPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKEDETFQQIVQTAVTKLHQSL 678