daf-12 c1, snap_masked-scaffold497_size155254-processed-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 56.225 bits (134), Expect = 4.339e-8 Identity = 34/106 (32.08%), Postives = 47/106 (44.34%), Query Frame = 0 Query: 481 SNSLLEP-SNDSLSGSEEGGTSGRRSKI----CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEA 581 SNSL S +S G + S ++I C +C S H YG TC C+ FFRR S C R C + NR +C+ CR + C+ GM+ + Sbjct: 15 SNSLYNTRSGNSACGGSDSNNSVHNAQIEIIPCKVCGDKSSGVH--YGVITCEGCKGFFRRSQSS--VVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000012750 (supercontig:LSalAtl2s:LSalAtl2s968:217376:224713:-1 gene:EMLSAG00000012750 transcript:EMLSAT00000012750 description:"maker-LSalAtl2s968-augustus-gene-1.36") HSP 1 Score: 56.225 bits (134), Expect = 4.865e-8 Identity = 42/157 (26.75%), Postives = 66/157 (42.04%), Query Frame = 0 Query: 205 TFVDVFDNNFWITVGLAFVMSTLALYILFLFV---------------QRETTIGFNTSLAISFLALLALSVPTYPRQVPGRILFLSVLVMGSLVFWSYNAGLVSLLTIEVVNLPIKSLEDLVQKTDYQLMVESATSYEDYFKTATKEINPTAATLWE 346 +F+ F WI G AFV ++ LY+L F + E S + +L+ P R++ ++ SY A L + LT+E + P +S EDL ++TD + V S E++FKT+T E T +WE Sbjct: 556 SFLSPFTLEVWIYTGFAFVFVSVVLYVLARFSPYEWNNPYPCIEEPEELENQFNIVNSFWFTIGSLMQQGSDVAPTATSTRLVAGMWYFFALIMISSYTANLAAFLTVETLEKPFESAEDLAKQTDIKYGVVEGGSTENFFKTSTFE---TYQKMWE 709
BLAST of daf-12 c1 vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 54.299 bits (129), Expect = 1.593e-7 Identity = 31/92 (33.70%), Postives = 43/92 (46.74%), Query Frame = 0 Query: 497 EGGTSGRRSKI-CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGK--TDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNE 585 E GT R I C +C S H YG +C C FF+R + + T + + C I ++R +CR CR K C MN +AV +E Sbjct: 96 EMGTGDRLLDIPCKVCGDRSSGKH--YGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHE 185
BLAST of daf-12 c1 vs. SwissProt
Match: gi|7676156|sp|O00482.2|NR5A2_HUMAN (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Alpha-1-fetoprotein transcription factor; AltName: Full=B1-binding factor; Short=hB1F; AltName: Full=CYP7A promoter-binding factor; AltName: Full=Hepatocytic transcription factor; AltName: Full=Liver receptor homolog 1; Short=LRH-1) HSP 1 Score: 73.9442 bits (180), Expect = 3.947e-12 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 0 Query: 506 KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDN----MWKRAKG 604 ++C +C +H YG TC SC+ FF+R VQ+ K R C + C I + R +C CRF+ C+ GM +EAV + DR R N M+KR + Sbjct: 84 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNK--RYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAV-----RADRMRGGRNKFGPMYKRDRA 177
BLAST of daf-12 c1 vs. SwissProt
Match: gi|387912843|sp|Q9NA51.2|NHR5_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-5) HSP 1 Score: 73.9442 bits (180), Expect = 5.089e-12 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 0 Query: 465 GFKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMN 578 G SNV N G ++ L S++ S G +S + +C +C +E L+YGA +C+ C+ FFRR + K D+L C + C +S +T+CR CRF C+R GMN Sbjct: 4 GGNSSNVNR--NSGSSNVITLNDSDEETEDSNLGSSSS--TNLCKVC--GAEKAALHYGALSCVGCKGFFRRALL--KADQLECAANGECTVSVLQKTQCRSCRFNKCLREGMN 109
BLAST of daf-12 c1 vs. SwissProt
Match: gi|3334187|sp|O42101.1|NR5A2_CHICK (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=FTF/LRH-1; AltName: Full=OR2.0) HSP 1 Score: 73.1738 bits (178), Expect = 6.444e-12 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 0 Query: 506 KICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDN----MWKRAKG 604 ++C +C +H YG TC SC+ FF+R VQ+ K R C + C I + R +C CRF+ C+ GM +EAV + DR R N M+KR + Sbjct: 44 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNK--RYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAV-----RADRMRGGRNKFGPMYKRDRA 137
BLAST of daf-12 c1 vs. SwissProt
Match: gi|6016234|sp|P79926.1|HNF4B_XENLA (RecName: Full=Hepatocyte nuclear factor 4-beta; Short=HNF-4-beta; AltName: Full=Nuclear receptor subfamily 2 group A member 3) HSP 1 Score: 72.7886 bits (177), Expect = 6.733e-12 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 CAIC + H YGA +C C+ FFRR V+ K AC+ S C + R +CR CR + C RAGM EAV NE ++ Sbjct: 50 CAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHVYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDR 126
BLAST of daf-12 c1 vs. SwissProt
Match: gi|160110004|sp|Q14541.3|HNF4G_HUMAN (RecName: Full=Hepatocyte nuclear factor 4-gamma; Short=HNF-4-gamma; AltName: Full=Nuclear receptor subfamily 2 group A member 2) HSP 1 Score: 72.4034 bits (176), Expect = 8.064e-12 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 507 ICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 +CAIC + H YGA +C C+ FFRR ++ K+ +C+ S C + R +CR CR + C RAGM EAV NE ++ Sbjct: 11 LCAICGDRATGKH--YGASSCDGCKGFFRRSIR--KSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDR 88
BLAST of daf-12 c1 vs. SwissProt
Match: gi|635377442|sp|P49866.3|HNF4_DROME (RecName: Full=Transcription factor HNF-4 homolog; Short=dHNF4; AltName: Full=Nuclear receptor subfamily 2 group A member 4) HSP 1 Score: 73.1738 bits (178), Expect = 8.828e-12 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0 Query: 507 ICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 +CAIC + H YGA +C C+ FFRR V+ K + C+ + C + R +CR CR + C +AGM EAV NE ++ Sbjct: 141 VCAICGDRATGKH--YGASSCDGCKGFFRRSVR--KNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDR 218
BLAST of daf-12 c1 vs. SwissProt
Match: gi|12644423|sp|Q27521.3|NHR16_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-16) HSP 1 Score: 72.0182 bits (175), Expect = 9.571e-12 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNEL 586 CAIC ++E FH +GA C +C AFFRR V + KT +C+ ++ C+++ + R CR CR+ CI GMN V L Sbjct: 14 CAICQESAEGFH--FGAEACRACAAFFRRTVSNRKT--YSCQGNNDCDVTINIRCMCRACRYIKCIEVGMNPAGVQQRL 88
BLAST of daf-12 c1 vs. SwissProt
Match: gi|10720045|sp|Q9WUU6.2|HNF4G_MOUSE (RecName: Full=Hepatocyte nuclear factor 4-gamma; Short=HNF-4-gamma; AltName: Full=Nuclear receptor subfamily 2 group A member 2) HSP 1 Score: 72.0182 bits (175), Expect = 1.024e-11 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0 Query: 507 ICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 +CAIC + H YGA +C C+ FFRR ++ K+ +C+ S C + R +CR CR + C RAGM EAV NE ++ Sbjct: 11 LCAICGDRATGKH--YGASSCDGCKGFFRRSIR--KSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDR 88
BLAST of daf-12 c1 vs. SwissProt
Match: gi|114152849|sp|O44960.2|NHR64_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-64) HSP 1 Score: 71.2478 bits (173), Expect = 1.127e-11 Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDNMWKRAKGEGDPDE 610 CAIC + H YGA +C C+ FFRR ++ K C+ + C + + R CRKCRF C+R GM +AV E DR R + + + G PD+ Sbjct: 27 CAICGDRATGKH--YGAMSCDGCKGFFRRTIR--KRHSYVCRFGEKCQVDKAKRNSCRKCRFDVCLRKGMRRDAVQTE---RDRIRPANPLSNGSNGGIVPDD 122
BLAST of daf-12 c1 vs. SwissProt
Match: gi|152032433|sp|Q5QJV7.2|ERR1_RAT (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1 >gi|341941116|sp|O08580.4|ERR1_MOUSE RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 71.633 bits (174), Expect = 1.249e-11 Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 486 EPSNDSLSGSEEGGT-----SGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDNMWKRAKGEGDP 608 E + +GS E G+ S ++C +C + +H YG +C +C+AFF+R +Q + +C S+ C I+ R C+ CRF C+R GM E V + DR R +KR + E DP Sbjct: 52 EEEDGEGAGSGEQGSGKLVLSSLPKRLCLVCGDVASGYH--YGVASCEACKAFFKRTIQG--SIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGV-----RLDRVRGGRQKYKR-RPEVDP 169
BLAST of daf-12 c1 vs. nr
Match: gi|657600362|gb|AID52842.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 298/491 (60.69%), Postives = 378/491 (76.99%), Query Frame = 0 Query: 735 KVEPRDI-EVVDQRVAPRLCSTGEHRQVLFLSLIWSESLSKMKINQRFLDSLIQFHKHSGVYTKPMLHEHLKTIGQHFLDFAVQIPEFKALTPNDQVKQLDRAVPMFISFIFAKYLGLPTGSEQFQWLFLLKSIPVDLQPTSFYEVNLALNLLQDTRKTVQCGNLVDIVAKIQVDLSKVFTVACACLFDPHPETQYDSLEQLVQSQETVLGYFALDRGHLWELIDAINRLSEIYTKMDWNNPMSISTLRMPFTDVEENWMDQGWSLINRCFQKVPLGEDHIKQVIASELFDVPFPPNFFRNYLGLWSKRFLAILQLFDEFQDLSNENQCRLWQSISNKLFSITMIKFESLPDAVSQLRFALGFEDMNTLEEMIRPWGTILEVMPRMGMKRSNRLNKFFDKAMEGRIEVMKREVAEVLQDVQIFSNCFMFLLFSQGKCMFPGYRIATLSDQYLRGMYRKLDAETVDPTIAIARLDKCLSNLDPYQELCDTLF 1224 K EP ++ E DQ +T EHRQVL LSL+WSE LSKMKINQRFLDSLIQFHK +G YTK M+ +HL IG F D+A QIPEFK L+ NDQ KQL+RA+PMFISFIFAKYLG GSEQFQWLFLLKS P+D+ PT+ Y VNL+LNLLQDT KT +C NL+ +AKI VD SKVFT+ACACLF+PHPE + DS+EQ++Q+QE VLGYF+LDRG LWELIDA RLS +Y M W + + ++++PFTD+E +WMD+ +I++ FQ+V LGE+H+K VIASELF+VPFPPNFF+ YL LWSKRFL ILQ F+EF LS+ NQC LWQ+ + K+F++T+IKFE PDA+SQLRFALG ED+ TLEEMIRPWG I EVMP+MGMKRSNR+NKFFDK E IE MK +A+V+ D +IF N FM+LL ++ K + P IA++ D++L +YRKLD + D +++ +L+KC+++L+ Y + LF Sbjct: 321 KREPSEVQETEDQHP-----TTTEHRQVLLLSLLWSECLSKMKINQRFLDSLIQFHKRTGSYTKAMILDHLNNIGALFQDYAKQIPEFKTLSTNDQHKQLERAIPMFISFIFAKYLGSTNGSEQFQWLFLLKSTPIDIDPTNLYAVNLSLNLLQDTVKTARCENLIKTIAKIPVDQSKVFTIACACLFEPHPEAECDSVEQIIQNQEKVLGYFSLDRGSLWELIDATRRLSLLYASMSWESTPRLKSIQLPFTDMENSWMDEACLMISKSFQEVALGEEHMKHVIASELFEVPFPPNFFQEYLKLWSKRFLTILQGFEEFNTLSSANQCLLWQATAKKVFTMTLIKFEHEPDAISQLRFALGVEDIQTLEEMIRPWGAIPEVMPKMGMKRSNRVNKFFDKEQEEIIEEMKSSIAKVIDDKKIFGNLFMYLLLAEAKNVLPKESIASIGDRHLTVLYRKLDNDG-DSKVSVDQLNKCIADLNTYNAQIEPLF 805 HSP 2 Score: 193.356 bits (490), Expect = 4.969e-47 Identity = 84/131 (64.12%), Postives = 108/131 (82.44%), Query Frame = 0 Query: 473 MYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRNYDNMWKRAK 603 M + G N++ E +N+S + SGRRSKICAICLTNS+SFHLNYGAPTCLSCRAFFRRIVQ+G+ ++L CKR++ C+++ SNRTKCRKCR +AC++AGMNM++VMNE++KHDRFRNYD MWKR + Sbjct: 1 MSEDDGDNNSPKPETTNES-NDKFPDDPSGRRSKICAICLTNSDSFHLNYGAPTCLSCRAFFRRIVQNGRVNKLTCKRNNDCDVTQSNRTKCRKCRLEACLKAGMNMQSVMNEIQKHDRFRNYDKMWKRTR 130
BLAST of daf-12 c1 vs. nr
Match: gi|657600358|gb|AID52840.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 95.1301 bits (235), Expect = 2.604e-16 Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 0 Query: 489 NDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRN 594 +D SG E S ++ C IC + HL+YGA TC SC+AFFRR QS + CK + CN+ + R KCRKCR++ CIR GM V+++ EK RF+ Sbjct: 10 DDGTSGMETEDVSMEPTEECQIC-QDPAIRHLHYGAITCFSCKAFFRRTSQSKAYQKFMCKSTGECNVLHKLRKKCRKCRYEKCIRVGMKPSLVLSDEEKIKRFKK 114
BLAST of daf-12 c1 vs. nr
Match: gi|17568425|ref|NP_510423.1| (Nuclear hormone receptor family member nhr-3 [Caenorhabditis elegans] >gi|10720139|sp|Q9XTJ4.1|NHR3_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-3 >gi|3878017|emb|CAA16168.1| Nuclear hormone receptor family member nhr-3 [Caenorhabditis elegans] >gi|4139070|gb|AAD03680.1| nuclear receptor NHR-3 [Caenorhabditis elegans] >gi|10197967|gb|AAG15118.1| nuclear receptor NHR-3 [Caenorhabditis elegans]) HSP 1 Score: 86.6557 bits (213), Expect = 8.720e-14 Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 477 QGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFRN 594 Q + SLL+P S S E G G S IC++C + H YG C C+ FFRR V++GK C+ S C I + R CR CRF+ C+ GM +A+ + +K R +N Sbjct: 22 QTFSMESLLKPELGEYSPSGENGIDGEESTICSVCCDEASGRH--YGVVACFGCKGFFRRTVRAGKN--YVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKN 135
BLAST of daf-12 c1 vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 85.5001 bits (210), Expect = 3.967e-13 Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 508 CAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEKHDRFR 593 C IC + H++YGA TC SCRAFFRR +Q+ + C+RS C I+ R C+ CR++ C+ GM V++E E+ RFR Sbjct: 41 CKIC-NEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFR 125
BLAST of daf-12 c1 vs. nr
Match: gi|926653773|ref|XP_013793497.1| (vitamin D3 receptor-like, partial [Limulus polyphemus]) HSP 1 Score: 80.4925 bits (197), Expect = 6.998e-13 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 0 Query: 481 SNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 S + +EP++ S T ++ K C +C ++S+H +G +C SC+AFFRR VQS C TC I+ S+R C+ CRF+ C+ GM VM E E+ Sbjct: 8 SATFIEPTDPSF-------TPAKKLKFCKVCGDRAKSYH--FGGLSCDSCKAFFRRSVQSAGYKNFQCPYRRTCEITISSRKCCQFCRFQKCVAIGMEKGWVMTEEER 106
BLAST of daf-12 c1 vs. nr
Match: gi|1241828755|gb|PBC25281.1| (Transcription factor HNF-4 [Apis cerana cerana]) HSP 1 Score: 80.1073 bits (196), Expect = 7.846e-13 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 491 SLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 12 TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 102
BLAST of daf-12 c1 vs. nr
Match: gi|1316197142|ref|XP_023244311.1| (hepatocyte nuclear factor 4-gamma-like [Centruroides sculpturatus]) HSP 1 Score: 83.1889 bits (204), Expect = 7.902e-13 Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 478 GVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 G+NS +LL ND+++ + + + C+IC + H YGA +C C+ FFRR V+ K R C++ C I + R +CR CRFK C + GM +EAV NE +K Sbjct: 79 GLNSGNLLSNQNDNVNIVSSSSDNQQFNFECSICGDKASGKH--YGAYSCDGCKGFFRRSVR--KNQRYRCRKDSNCIIDKNGRNQCRFCRFKKCYQVGMKIEAVQNERDK 185
BLAST of daf-12 c1 vs. nr
Match: gi|675863136|ref|XP_009017128.1| (hypothetical protein HELRODRAFT_79060, partial [Helobdella robusta] >gi|555701316|gb|ESO04549.1| hypothetical protein HELRODRAFT_79060, partial [Helobdella robusta]) HSP 1 Score: 78.5666 bits (192), Expect = 1.000e-12 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 504 RSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEA 581 RS C +C S FH +GA TC C+ FFRR+++ + C + CNI +NRT C+ CRF CI+ GM +E Sbjct: 80 RSIPCKVCKAPSSGFH--FGAITCEGCKGFFRRMLKEQVHRKFICSNDERCNIDSANRTTCKSCRFNKCIKIGMTLEG 155
BLAST of daf-12 c1 vs. nr
Match: gi|572316407|ref|XP_006623829.1| (PREDICTED: transcription factor HNF-4 homolog isoform X1 [Apis dorsata]) HSP 1 Score: 83.1889 bits (204), Expect = 1.046e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 466 FKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 F+V + + + G S+L +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 8 FEVLDADLSMGAGAAGGSVL-----TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 118
BLAST of daf-12 c1 vs. nr
Match: gi|572316409|ref|XP_006623830.1| (PREDICTED: transcription factor HNF-4 homolog isoform X2 [Apis dorsata]) HSP 1 Score: 83.1889 bits (204), Expect = 1.094e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0 Query: 466 FKVSNVAMYVNQGVNSNSLLEPSNDSLSGSEEGGTSGRRSKICAICLTNSESFHLNYGAPTCLSCRAFFRRIVQSGKTDRLACKRSDTCNISYSNRTKCRKCRFKACIRAGMNMEAVMNELEK 588 F+V + + + G S+L +LSGS G G S+ CAIC + H YGA +C C+ FFRR V+ K C+ S C I R +CR CR + C +AGM MEAV NE ++ Sbjct: 8 FEVLDADLSMGAGAAGGSVL-----TLSGS---GVGGVLSQHCAICGDRATGKH--YGAASCDGCKGFFRRSVR--KKHEYTCRFSRNCIIDKDKRNQCRYCRLRKCFKAGMKMEAVQNERDR 118 The following BLAST results are available for this feature:
BLAST of daf-12 c1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of daf-12 c1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of daf-12 c1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold497_size155254:103658..142498- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold497_size155254-processed-gene-0.9 ID=snap_masked-scaffold497_size155254-processed-gene-0.9|Name=daf-12 c1|organism=Tigriopus kingsejongensis|type=gene|length=38841bp|location=Sequence derived from alignment at scaffold497_size155254:103658..142498- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'daf-12 c1' has the following synonyms
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