AGAP007930-PA, snap_masked-scaffold49_size462716-processed-gene-3.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP007930-PA vs. L. salmonis genes
Match: EMLSAG00000008230 (supercontig:LSalAtl2s:LSalAtl2s496:50959:123619:1 gene:EMLSAG00000008230 transcript:EMLSAT00000008230 description:"maker-LSalAtl2s496-augustus-gene-1.5") HSP 1 Score: 53.9138 bits (128), Expect = 1.068e-8 Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0 Query: 218 PRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLL 304 P ITG ++ Y G+ ++ +C+S S P L+W+IN A S L Y ++ E D TS+LG+ F +R HF ++ C + + Sbjct: 111 PTITGRRDRYTSGDLVELNCSSNSSKPATELSWYINSIQADNSTLIYYPIKEERDGRKTSILGIKFRLRE-HFFSVSISDACGCTYI 196
BLAST of AGAP007930-PA vs. nr
Match: gi|1325266323|ref|XP_023338379.1| (uncharacterized protein LOC111709035 [Eurytemora affinis]) HSP 1 Score: 153.295 bits (386), Expect = 1.110e-39 Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 0 Query: 212 DLPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHM 325 DLPD+KPRI+G+K+ YQ+GE I+A CTSW SHPPANL+WFIN EPA+ YLK ++R E+DETFTSVL L F++ HF A+ LKCTSSLL+IYWQSS + + + P + + Sbjct: 138 DLPDDKPRISGIKDKYQIGETIEAMCTSWHSHPPANLSWFINEEPARTDYLKPLKIREEYDETFTSVLNLKFEISHHHFRNGAIKLKCTSSLLTIYWQSSMVELHEASPRLGQL 251
BLAST of AGAP007930-PA vs. nr
Match: gi|1059400058|ref|XP_017772957.1| (PREDICTED: cell adhesion molecule 2-like [Nicrophorus vespilloides]) HSP 1 Score: 108.997 bits (271), Expect = 2.192e-23 Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 0 Query: 198 YYEPVDDEYRNANPDLPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLEFDETF-TSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ---IPSSTR 335 +++ V + LP+E+PRI G + YQVG+ ++ +CTS +S P A L WFINGE A +S+LK E + E TSVLGL F V+P HF M LKC +++ ++YW+S+E ++ + P + ++ S+ PS +R Sbjct: 123 FFQTVTEHGHMIVVALPEEEPRIAGGRNRYQVGDTVRVNCTSGRSKPAAQLNWFINGENADQSFLKGPETFVTGREGLETSVLGLEFVVKPKHFKQGDMKLKCLATIATVYWRSNEESVEGERPQRASVLESRGTVAPSGSR 264
BLAST of AGAP007930-PA vs. nr
Match: gi|158297289|ref|XP_317551.4| (AGAP007930-PA, partial [Anopheles gambiae str. PEST] >gi|157015123|gb|EAA12775.4| AGAP007930-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 106.301 bits (264), Expect = 7.192e-23 Identity = 49/107 (45.79%), Postives = 74/107 (69.16%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLE-FDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQ 318 LPD+ P ITG K YQ+G+ ++ +CTS +S P +LTW+ING+PA+ +KRYE R+ D+ TSVLGL F V+P HF M LKC +++ ++YW+S+E ++ + Sbjct: 102 LPDQDPYITGGKPRYQIGDPVRVNCTSGRSKPAVHLTWYINGDPAEPGLVKRYEPRITGADKLETSVLGLEFRVKPKHFKHGDMKLKCLATISTVYWKSNEESVEGE 208
BLAST of AGAP007930-PA vs. nr
Match: gi|668450478|gb|KFB39719.1| (AGAP007930-PA-like protein [Anopheles sinensis]) HSP 1 Score: 107.457 bits (267), Expect = 8.449e-23 Identity = 54/143 (37.76%), Postives = 87/143 (60.84%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLE-FDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ--IPSSTRRGNSPTVLDKPHPPTKK 352 LPD+ P ITG K YQ+G+ ++ +CTS +S P +LTW+ING+PA +S LK YE R+ D TS+LGL F V+P HF M LKC +++ ++YW+S+E ++ + + + S+ + + +R + PPT++ Sbjct: 134 LPDQDPYITGGKPRYQIGDPVRVNCTSGRSKPAVHLTWYINGDPADKSLLKHYEPRISGVDRLETSILGLEFRVKPKHFKHGDMKLKCLATISTVYWKSNEESVEGEKLQKAPTLESRRAVSADSRADRVQGKFVRAQPPTQE 276
BLAST of AGAP007930-PA vs. nr
Match: gi|1000195619|gb|KXJ70572.1| (hypothetical protein RP20_CCG023011 [Aedes albopictus]) HSP 1 Score: 106.686 bits (265), Expect = 1.227e-22 Identity = 52/126 (41.27%), Postives = 80/126 (63.49%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYE-LRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ--IPSSTR 335 LPDE P ITG K YQ+G+ ++ +CTS +S P +LTW+IN EPA +++YE + D TS+LGL F V+P HF M LKC +++ ++YW+S+E ++ P + M+ S+ + S+TR Sbjct: 138 LPDEDPHITGGKPRYQIGDYVRVNCTSGRSKPAVHLTWYINSEPADHGLVRQYEPIVSGSDRLETSILGLEFRVKPKHFKRGDMKLKCLATISTVYWKSNEESVEGDKPQKAPMLESRKAVASNTR 263
BLAST of AGAP007930-PA vs. nr
Match: gi|568255756|gb|ETN64469.1| (beat protein [Anopheles darlingi]) HSP 1 Score: 107.071 bits (266), Expect = 2.231e-22 Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLE-FDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQ 318 LPD+ P ITG K YQVG+ ++ +CTS +S P +LTW+ING+PA LKRYE R+ D TS+LGL F V+P HF M LKC +++ ++YW+S+E ++ + Sbjct: 173 LPDQDPYITGGKPRYQVGDPVRVNCTSGRSKPAVHLTWYINGDPADPGLLKRYEPRITGIDRLETSILGLEFRVKPKHFKHGDMKLKCLATISTVYWKSNEESVEGE 279
BLAST of AGAP007930-PA vs. nr
Match: gi|108881871|gb|EAT46096.1| (AAEL002690-PA [Aedes aegypti]) HSP 1 Score: 106.301 bits (264), Expect = 2.555e-22 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYE-LRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ--IPSSTR 335 LPDE P ITG K YQ+G+ ++ +CTS +S P +LTW+IN E A + ++RYE + D TS+LGL F V+P HF M LKC + + S+YW+S+E ++ P + M+ S+ + S+TR Sbjct: 120 LPDEDPHITGGKPRYQIGDYVRVNCTSGRSKPAVHLTWYINSEEADDGLVRRYEPIVSGADRLETSILGLEFRVKPKHFKRGDMKLKCLAKISSVYWKSNEESVEGDKPQKAPMLESRKAVASNTR 245
BLAST of AGAP007930-PA vs. nr
Match: gi|1218247264|ref|XP_021703962.1| (uncharacterized protein LOC5575663 [Aedes aegypti]) HSP 1 Score: 105.916 bits (263), Expect = 4.295e-22 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYE-LRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ--IPSSTR 335 LPDE P ITG K YQ+G+ ++ +CTS +S P +LTW+IN E A + ++RYE + D TS+LGL F V+P HF M LKC + + S+YW+S+E ++ P + M+ S+ + S+TR Sbjct: 131 LPDEDPHITGGKPRYQIGDYVRVNCTSGRSKPAVHLTWYINSEEADDGLVRRYEPIVSGADRLETSILGLEFRVKPKHFKRGDMKLKCLAKISSVYWKSNEESVEGDKPQKAPMLESRKAVASNTR 256
BLAST of AGAP007930-PA vs. nr
Match: gi|646710283|gb|KDR15839.1| (hypothetical protein L798_09549, partial [Zootermopsis nevadensis]) HSP 1 Score: 103.99 bits (258), Expect = 4.713e-22 Identity = 50/129 (38.76%), Postives = 80/129 (62.02%), Query Frame = 0 Query: 213 LPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLEFDETF-TSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQ--IPSSTRRGN 338 LP+E PRITG + YQ+G+ ++ +CTS +S P A L WFINGE A ++L+ E+ E T++LGL F V+P HF M LKC +++ ++YW+S+E ++ P + ++ S+ +P S R + Sbjct: 118 LPEEGPRITGGRPRYQIGDTVRVNCTSGRSKPAAQLMWFINGEQADSTFLQGPEIVYTGREGLETAILGLEFRVKPKHFRRGDMKLKCLATIATVYWRSNEESVEGDKPQKAPVLESRETVPPSKSRAD 246
BLAST of AGAP007930-PA vs. nr
Match: gi|225712892|gb|ACO12292.1| (Cell adhesion molecule 3 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 104.375 bits (259), Expect = 4.791e-22 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 0 Query: 212 DLPDEKPRITGVKESYQVGENIKASCTSWQSHPPANLTWFINGEPAKESYLKRYELRLEFDETFTSVLGLHFDVRPMHFHGNAMVLKCTSSLLSIYWQSSEMRIKQQVPHISHMINSQIPSSTRRG 337 DLPD+ P ITG Y++G+ ++ +CTS++S P A L W+INGE A ++ R++L + + TSVLGL F VR HFH + LKCT+++ +IYW+S+E ++ P S + S +R G Sbjct: 139 DLPDDGPIITGGFPRYRIGDRVEVNCTSYRSKPAAKLKWYINGEQADPAFTHRFKLIKDKNGLETSVLGLRFKVREKHFHKGDLKLKCTATIATIYWKSNEESVQGVRPQ------SALVSESRSG 258 The following BLAST results are available for this feature:
BLAST of AGAP007930-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 11
Pagesback to top
BLAST of AGAP007930-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of AGAP007930-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold49_size462716:319193..326268+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold49_size462716-processed-gene-3.3 ID=snap_masked-scaffold49_size462716-processed-gene-3.3|Name=AGAP007930-PA|organism=Tigriopus kingsejongensis|type=gene|length=7076bp|location=Sequence derived from alignment at scaffold49_size462716:319193..326268+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP007930-PA' has the following synonyms
Add to Basket
|