eukaryotic initiation factor 4a-ii, snap_masked-scaffold506_size152672-processed-gene-0.7 (gene) Tigriopus kingsejongensis

Overview


Name	eukaryotic initiation factor 4a-ii
Unique Name	snap_masked-scaffold506_size152672-processed-gene-0.7
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33")

HSP 1 Score: 101.679 bits (252), Expect = 6.692e-24
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 0

Query:   58 FDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQID----TSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFD-MISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLEHGDMDQK 252
            F DM L    L+G+    +++P+ IQ+ +I  C +G DV+  A++G GKT  F I IL+ +     T L    AL++ PTRELA QI + +  +G +        IGG  ++ + ++L    +IV+ TPGR+   M       P  +++ VLDEAD  L  GF + +  +  +L    Q +L SAT    + + G +  K
Sbjct:  104 FRDMPLSAYTLKGLKENNYDEPTQIQKESIGLCFRGSDVLGAAKTGCGKTLAFVIPILELLHREKWTKLDGLGALVITPTRELAYQIFETLRKVGKHHEFSAGLVIGGKDLQYETKRLSTC-NIVICTPGRLLQHMDENPQFDPITLQILVLDEADRCLDLGFAETMNAILGNLPKERQTLLFSATQTRSIKDLGRLSLK 302

HSP 2 Score: 52.7582 bits (125), Expect = 8.454e-8
Identity = 27/76 (35.53%), Postives = 41/76 (53.95%), Query Frame = 0

Query:  246 HGDMDQKERDVIMREF-RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFIT 320
            +G + Q  R  I  EF +  +S VL  TD+ ARG+D  +V  V   D P + + Y+HR+GR  R    G ++  +T
Sbjct:  379 YGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLT 454

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Match: EMLSAG00000006615 (supercontig:LSalAtl2s:LSalAtl2s364:491177:493327:-1 gene:EMLSAG00000006615 transcript:EMLSAT00000006615 description:"snap_masked-LSalAtl2s364-processed-gene-5.14")

HSP 1 Score: 99.7525 bits (247), Expect = 2.427e-23
Identity = 65/189 (34.39%), Postives = 108/189 (57.14%), Query Frame = 0

Query:   61 MELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQ--IDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHI-------VVGTPGRVFDMISRK-VLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATM 239
            M L + LL  +   G+ +P+ IQ RA+   ++G D++A+ ++G+GKT  F++ +LQ+  +  S  + +AL LAP+REL QQI  VV +L  + G      IG  S+ E+   LEAG+ +       +V TPGR++  I  K +     +++ V+DEAD   S G++  +  +  +L +  Q VL SAT+
Sbjct:    1 MGLDDRLLESVAELGWSEPTLIQSRAVPLILEGKDLLARGRTGSGKTGAFALPVLQRLLLGESTGSVRALFLAPSRELVQQIHGVVRSLLSHCGRSI--SIGNLSMGEN---LEAGRALLKTPPDXLVSTPGRLWSHIQAKDIDLSSSLEILVIDEADLTFSFGYESDLKGILINLPSIYQSVLTSATL 184

HSP 2 Score: 50.447 bits (119), Expect = 3.967e-7
Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0

Query:  275 LARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFI 319
            ++RGID Q VS VIN+D P + ++YIHR+GR  R    G A++ I
Sbjct:  324 ISRGIDFQFVSNVINFDFPLDVDSYIHRVGRTARGNNTGTALSMI 368

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 99.3673 bits (246), Expect = 3.648e-23
Identity = 63/199 (31.66%), Postives = 96/199 (48.24%), Query Frame = 0

Query:   58 FDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQI--------DTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQ-HIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHL----NTTIQVVLLSATMPIEV 243
            F D      L   I    + +P+ +Q+ A+   +   D+I+ AQ+G+GKTA F + I+  +         +  A  + LIL PTREL  QI          M   C    GG+S       L   +  I+  TPGR+ DM+ ++ +  ++I+  V+DEAD ML  GF++ I +V  H      T  Q +L SAT P E+
Sbjct:  166 FRDTPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEI 364

HSP 2 Score: 87.0409 bits (214), Expect = 4.886e-19
Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0

Query:  246 HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTL 327
            HGD  Q++R+  +R+F+ GS  +L+ T++ +RG+D+ +VSLVINYDLP +   Y+HRIGR GR G  G +I+F   +  R L
Sbjct:  449 HGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPL 530

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12")

HSP 1 Score: 97.0561 bits (240), Expect = 2.273e-22
Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 0

Query:   57 SFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQI--DTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISRK-VLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEV 243
            SF  M L   LL+ I    +  P+ IQ   I   + G DV   A +GTGKTA + + IL+++    + +  + ++L PTREL  Q+ +V   L  +        +GG  ++     L     IV+ TPGR+ D I        ++I++ +LDEAD ML   F +Q+ ++ +  +   Q +L SATM  +V
Sbjct:  183 SFYAMXLSRPLLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILERLLFRPNQSITRVIVLVPTRELGVQVYQVSKQLSQFTSIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKV 372

HSP 2 Score: 79.7221 bits (195), Expect = 1.505e-16
Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = 0

Query:  246 HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEK 332
            HG++ Q +R   +++F+     VLITTD+ ARG+D+  V  VINY LPT  E+YIHR+GR  R GR G +++   + D++ +++I K
Sbjct:  457 HGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDRKMVREIVK 543

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Match: EMLSAG00000012740 (supercontig:LSalAtl2s:LSalAtl2s967:89676:95604:1 gene:EMLSAG00000012740 transcript:EMLSAT00000012740 description:"augustus_masked-LSalAtl2s967-processed-gene-0.13")

HSP 1 Score: 93.9745 bits (232), Expect = 2.203e-21
Identity = 44/97 (45.36%), Postives = 65/97 (67.01%), Query Frame = 0

Query:  246 HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMP 342
            H      +R+  ++ FR+G + VLI T+L++RGIDV+ V+LVINYD P +  +YIHR+GR GR GR G A+ F TDDDK  L+ I +  ++  + +P
Sbjct:  333 HSHRSLLQREDAIKTFRAGRTWVLICTELMSRGIDVKGVNLVINYDFPPSTVSYIHRVGRTGRAGRPGRAVTFFTDDDKVLLRSIAQIVSSSGNNVP 429

HSP 2 Score: 58.5362 bits (140), Expect = 1.142e-9
Identity = 43/175 (24.57%), Postives = 89/175 (50.86%), Query Frame = 0

Query:   76 FEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMAL--GDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISR-KVLRPQDIKMFVLDEADEML----SRGFKDQIYDVFRHLNTTIQVVLLSATMPIEV 243
            +  P+ IQ ++I   ++G DV+  A +G+GKTA + + IL  ++      + +IL PTREL+ QI +  + L   +Y   Q    +  +      +K   G ++++ TP  +  +I     L  + ++  ++DE+D++        F++Q+  V++   ++ +    SAT+  +V
Sbjct:   87 YPNPTPIQAQSIPIMLQGRDVLGSAPTGSGKTAAYLLPIL--VNQEKNKLKTIILCPTRELSHQIHQEALKLIPPNY---QTKVQVASS------KKSNQGANVLISTPNTLVYLIKDGSSLDLKSLEWLIVDESDKLFEDKGKASFREQLAVVYKACMSS-KKAFFSATLATDV 249

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|2507330|sp|P10630.2|IF4A2_MOUSE (RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2 >gi|45645183|sp|Q14240.2|IF4A2_HUMAN RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2 >gi|73621053|sp|Q5R4X1.1|IF4A2_PONAB RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2 >gi|81889423|sp|Q5RKI1.1|IF4A2_RAT RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2 >gi|109892472|sp|Q3SZ65.1|IF4A2_BOVIN RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2)

HSP 1 Score: 402.134 bits (1032), Expect = 1.541e-138
Identity = 230/394 (58.38%), Postives = 267/394 (67.77%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVF----------------------DMISR----------------------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GMDPDGVI+SNWN + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++      QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT+VR +M+KL+A   HIVVGTPGRVF                      +M+SR                          P D+    K F      +L + +E+   G K             D + D++  L  T  V+ L+    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T++DKR L+DIE FYNT ++EMPMNVADLI
Sbjct:   14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|82213243|sp|Q8JFP1.1|IF4A2_CHICK (RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; AltName: Full=ATP-dependent RNA helicase eIF4A-2)

HSP 1 Score: 402.134 bits (1032), Expect = 2.002e-138
Identity = 230/394 (58.38%), Postives = 268/394 (68.02%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVF----------------------DMISR----------------------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+PDGVI+SNWN + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++  L   QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT+VR +M+KL+A   HIVVGTPGRVF                      +M+SR                          P D+    K F      +L + +E+   G K             D + D++  L  T  V+ L+    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T++DKR L+DIE FYNT ++EMPMNVADLI
Sbjct:   14 GPEGMEPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|124217|sp|P27639.1|IF4A_CAEEL (RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A; AltName: Full=Initiation factor 1)

HSP 1 Score: 387.111 bits (993), Expect = 1.040e-132
Identity = 207/389 (53.21%), Postives = 252/389 (64.78%), Query Frame = 0

Query:   41 MDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISRKVL-------------------------------RPQDIKMFVLD-----------------------EADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            +D DG+I+ N++ V ESFDDMEL+EELLRGIY +GFEKPSAIQ+RAIVPC  G DVIAQAQSGTGKTATFS+SILQ+ID      QAL++APTRELAQQIQKV+ ALG+Y+      CIGGTSVR+D RKLEAG H+VVGTPGRV DMI+R  L                                PQD+++ +L                        + DE+   G +             D + D++  +N T  V+  +    ++ L              HGDMDQ ERD IMREFRSGSSRVLITTD+LARGIDVQQVSLVINYDLP+NRENYIHRIGR GRFGRKGVAINF+T++D R L++IE +Y T+I+EMP ++ADLI
Sbjct:   14 VDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|73621050|sp|Q4R8K5.1|IF4A1_MACFA (RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1)

HSP 1 Score: 380.178 bits (975), Expect = 6.625e-130
Identity = 220/394 (55.84%), Postives = 261/394 (66.24%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKL-----------------------------------EAGQHIVVGTPGRVFDMISR----------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL                                   EA + +  G   +++D+  +              P D+    K F      +L + +E+   G +             D + D++  L  T  V+ ++    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:   13 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|46397463|sp|P60842.1|IF4A1_HUMAN (RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1 >gi|46397464|sp|P60843.1|IF4A1_MOUSE RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1 >gi|109892471|sp|Q3SZ54.1|IF4A1_BOVIN RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1)

HSP 1 Score: 380.178 bits (975), Expect = 6.771e-130
Identity = 220/394 (55.84%), Postives = 261/394 (66.24%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKL-----------------------------------EAGQHIVVGTPGRVFDMISR----------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL                                   EA + +  G   +++D+  +              P D+    K F      +L + +E+   G +             D + D++  L  T  V+ ++    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:   13 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|31077172|sp|P29562.2|IF4A1_RABIT (RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1)

HSP 1 Score: 379.793 bits (974), Expect = 9.148e-130
Identity = 220/394 (55.84%), Postives = 261/394 (66.24%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKL-----------------------------------EAGQHIVVGTPGRVFDMISR----------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL                                   EA + +  G   +++D+  +              P D+    K F      +L + +E+   G +             D + D++  L  T  V+ ++    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:    5 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 398

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|158514251|sp|A5A6N4.1|IF4A1_PANTR (RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1)

HSP 1 Score: 378.637 bits (971), Expect = 2.793e-129
Identity = 219/394 (55.58%), Postives = 260/394 (65.99%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKL-----------------------------------EAGQHIVVGTPGRVFDMISR----------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL                                   EA + +  G   +++D+  +              P D+    K F      +L + +E+   G +             D + D++  L  T  V+ ++    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGV IN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:   13 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|74699660|sp|Q4P331.1|IF4A_USTMA (RecName: Full=ATP-dependent RNA helicase eIF4A; AltName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=Translation initiation factor 1)

HSP 1 Score: 377.096 bits (967), Expect = 1.450e-128
Identity = 217/386 (56.22%), Postives = 256/386 (66.32%), Query Frame = 0

Query:   44 DGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISRKVLR-------------------------------PQDIKMFVLDEA-----------------------DEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            DG I+SNW  V ++FD+MEL+EELLRG+YAYGFE+PSAIQ RAIVP +KG DVIAQAQSGTGKTATFSI+ILQ+ID S+ A QALILAPTRELAQQIQKVV+ALGDYM   CHACIGGT+VREDM KL  G  +VVGTPGRV+DMI+R+  +                               PQD +  +L                          DE+   G K             D + D++  +  T  V+  +    ++ L              HGDM+Q +R+VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP+NRENYIHRIGRGGRFGRKGVAINF+T DD R L+DIE+FY+T+IDEMP+NVADLI
Sbjct:   26 DGEIESNWETVIDNFDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDTQCVLLSATMPQEVLEVTKKFMRDPIRILVKRDELTLEGIKQFYVAVEKEDWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQIDEMPLNVADLI 411

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|73621051|sp|Q5R5F5.1|IF4A1_PONAB (RecName: Full=Eukaryotic initiation factor 4A-I; Short=eIF-4A-I; Short=eIF4A-I; AltName: Full=ATP-dependent RNA helicase eIF4A-1)

HSP 1 Score: 375.941 bits (964), Expect = 3.243e-128
Identity = 219/394 (55.58%), Postives = 260/394 (65.99%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVV----------------------------------GTPGRVFDMISR----------KVLRPQDI----KMF------VLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+P+GVI+SNWN + +S DDM L E LLRGIYAYGFEKPSAIQQRAI+ C+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL+    HI+V                                  G   +++D+  +              P D+    K F      +L + +E+   G +             D + D++  L  T  V+ ++    ++ L              HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:   13 GPDGMEPEGVIESNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Match: gi|161789047|sp|Q7RV88.2|IF4A_NEUCR (RecName: Full=ATP-dependent RNA helicase eIF4A; AltName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=Translation initiation factor 1)

HSP 1 Score: 370.548 bits (950), Expect = 3.700e-126
Identity = 212/387 (54.78%), Postives = 258/387 (66.67%), Query Frame = 0

Query:   43 PDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISRKVLR--------------------------------------------PQDI----------KMFVLDEADEMLSRGFK-------------DQIYDVFRHLNTTIQVVLLSATMPIEVLE-------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            P+G I+SN++   +SFD+M L+ ELLRGIYAYGFE+PSAIQQRAI+P +KG DVIAQAQSGTGKTATFSIS+LQ+ID SL ACQALILAPTRELAQQIQKVV+A+GD+M  +CHACIGGTSVR+DM+ L+ G  +VVGTPGRV DMI R+ L+                                            PQD+           + +L + DE+   G K             D + D++  +  T  V+  +    ++ L              HGDMDQ +RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP NRENYIHRIGRGGRFGRKGVAINF+T DD R +++IE+FY+T+I+EMPMNVADLI
Sbjct:   11 PEGQIESNYDETVDSFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMREPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 397

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|465953010|gb|EMP25200.1| (Eukaryotic initiation factor 4A-II [Chelonia mydas])

HSP 1 Score: 495.352 bits (1274), Expect = 6.483e-173
Identity = 264/389 (67.87%), Postives = 303/389 (77.89%), Query Frame = 0

Query:    1 MSDSNERKSPAPQEESWNSDRIPAGNPEEPRGPA-----YEGPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            +  S +R +P P +      R P         PA     + GP GMDPDG+I+SNWN + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++  L   QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT+VR +M+KL+A   HIVVGTPGRVFDM++R+ L P+ IKMFVLDEADEMLSRGFKDQIY++F+ L+T IQVVLLSATMP++VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T++DKR L+DIE FYNT ++EMPMNVADLI
Sbjct:   18 LRHSRKRLAPHPCDPGGEGQRAPC--------PALTCRDHGGPEGMDPDGIIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 398

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|565310262|gb|ETE63526.1| (Eukaryotic initiation factor 4A-II [Ophiophagus hannah])

HSP 1 Score: 491.115 bits (1263), Expect = 5.599e-172
Identity = 254/344 (73.84%), Postives = 287/344 (83.43%), Query Frame = 0

Query:   41 MDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            MDPDGVI+SNWN + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++  L   QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT+VR +M+KL+A   HIVVGTPGRVFDM++R+ L P+ IKMFVLDEADEMLSRGFKDQIY++F+ L+T IQVVLLSATMP++VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T++DKR L+DIE FYNT ++EMPMNVADLI
Sbjct:    1 MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 344

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|938051994|gb|KPP59149.1| (Eukaryotic initiation factor 4A-II-like [Scleropages formosus])

HSP 1 Score: 490.73 bits (1262), Expect = 1.075e-171
Identity = 254/348 (72.99%), Postives = 288/348 (82.76%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+PDG+I+SNWN + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++      QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT+VR +M+KL+A   HIVVGTPGRVFDM++R+ L P+ IKMFVLDEADEMLSRGFKDQIY++F+ L+T IQVVLLSATMP +VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T++DKR L+DIE FYNT ++EMPMNVADLI
Sbjct:   10 GPDGMEPDGIIESNWNEIVDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEQRETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTKKFMREPVRILVKKEELTLEGIKQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 357

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|966705803|gb|KTG38044.1| (hypothetical protein cypCar_00024873 [Cyprinus carpio])

HSP 1 Score: 490.345 bits (1261), Expect = 1.573e-171
Identity = 256/352 (72.73%), Postives = 286/352 (81.25%), Query Frame = 0

Query:   33 PAYEGPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAG-QHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            P   GP GM+PDGVI+SNW  + +SFDDM LRE LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQ ID  + A QA++LAPTRELAQQIQKVV+ALGDYMGA CHACIGGT+VR D++KL+A   HIVVGTPGRVFDM++R+ L P+ IKMF LDEADEMLSRGFKDQIY++F+ L T  QV+LLSATMP EVLE                                  HGDM+QKERDVIM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T+DDKRTL+DIE FYNT ++EMPMNVADLI
Sbjct:    9 PRDNGPEGMEPDGVIESNWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQHIDVEMKATQAMVLAPTRELAQQIQKVVLALGDYMGASCHACIGGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLGTDTQVILLSATMPQEVLEVTTKFMRDPIRILVKKEELTLEGIRQFYINVEKEHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI 360

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|543381267|ref|XP_005533827.1| (PREDICTED: eukaryotic initiation factor 4A-I [Pseudopodoces humilis])

HSP 1 Score: 489.96 bits (1260), Expect = 2.385e-171
Identity = 255/348 (73.28%), Postives = 287/348 (82.47%), Query Frame = 0

Query:   37 GPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLE-AGQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            GP GM+PDGVI+SNW+ V +SFD+M L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL+    H+VVGTPGRVFDM++R+ L P+ IKMFVLDEADEMLSRGFKDQIYD+F+ L+   QVVLLSATMP++VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:   13 GPEGMEPDGVIESNWHEVVDSFDEMNLSEALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQVELELKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQLEAPHVVVGTPGRVFDMLNRRYLSPKFIKMFVLDEADEMLSRGFKDQIYDIFQKLSGNTQVVLLSATMPLDVLEVTKKFMREPIRILVKKEELTLEGIRQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTAIEEMPLNVADLI 360

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|966706079|gb|KTG38320.1| (hypothetical protein cypCar_00016679 [Cyprinus carpio])

HSP 1 Score: 489.574 bits (1259), Expect = 3.240e-171
Identity = 255/352 (72.44%), Postives = 286/352 (81.25%), Query Frame = 0

Query:   33 PAYEGPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAG-QHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            P   GP GM+PDGVI+SNW  + +SFDDM LRE LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQ +D  L A QA++LAPTRELAQQIQKVV+ALGDYMGA CHACIGGT+VR D++KL+A   HIVVGTPGRVFDM++R+ L P+ IKMF LDEADEMLSRGFKDQIY++F+ L T  QV+LLSATMP EVLE                                  HGDM+QKERD+IM+EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T+DDKRTL+DIE FYNT ++EMPMNVADLI
Sbjct:    9 PRDNGPEGMEPDGVIESNWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQHVDVDLKATQAMVLAPTRELAQQIQKVVLALGDYMGASCHACIGGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLGTDTQVILLSATMPQEVLEVTTKFMRDPIRILVKKEELTLEGIRQFYINVEKEHGDMEQKERDIIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI 360

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|431894013|gb|ELK03819.1| (Eukaryotic initiation factor 4A-I [Pteropus alecto])

HSP 1 Score: 486.878 bits (1252), Expect = 2.727e-170
Identity = 254/344 (73.84%), Postives = 284/344 (82.56%), Query Frame = 0

Query:   41 MDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            M+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL+    HI+VGTPGRVFDM++R+ L P+ IKMFVLDEADEMLSRGFKDQIYD+F+ LN+  QVVLLSATMP +VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:    1 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 344

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|556956355|ref|XP_005989465.1| (PREDICTED: eukaryotic initiation factor 4A-II isoform X3 [Latimeria chalumnae])

HSP 1 Score: 487.263 bits (1253), Expect = 2.853e-170
Identity = 254/349 (72.78%), Postives = 287/349 (82.23%), Query Frame = 0

Query:   36 EGPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            +GP GM PDGVI+SNW+ + ++FDDM L+E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQ++  L   QAL+LAPTRELAQQIQKV++ALGDYMGA CHACIGGT VR +++KL+    HIVVGTPGRVFDM++R  L P+ IKMFVLDEADEMLSRGFKDQIY++F+ LN +IQVVLLSATMP++VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINF+T+DDKR L+DIE FYNT ++EMPMNVADLI
Sbjct:   15 DGPEGMVPDGVIESNWDEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGRDVIAQAQSGTGKTATFAISILQQLEVDLKEIQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTVVRAEIQKLQGEAPHIVVGTPGRVFDMLNRGCLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNNSIQVVLLSATMPVDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEDDKRILRDIETFYNTTVEEMPMNVADLI 363

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|914573619|gb|KOB76105.1| (Eukaryotic initiation factor 4a [Operophtera brumata])

HSP 1 Score: 486.878 bits (1252), Expect = 7.920e-170
Identity = 256/382 (67.02%), Postives = 301/382 (78.80%), Query Frame = 0

Query:    9 SPAPQEESWNSDRIPAGNPEEPRGPA-----YEGPAGMDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEAGQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE------------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            SP  + E W         PE+  GPA     Y+GP GM+P+G +D+NW+ V ESFDDM L+EELLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQAQSGTGKTATFSISILQQIDT++  CQALILAPTRELAQQIQKVV+ALGD++ A+CHACIGGT+VRED+R+LE+G ++VVGTPGRV+DMI+R+ LR   IK+FVLDEADEMLSRGFKDQI+DVF+ L+  +QV+LLSATMP +VLE                                    HGDMDQ+ER+VIMR+FR+GSSRVLITTDLLARGIDVQQVS VINYDLPTNRENYIHRIGRGGRFGRKG+AINF+T+ DKR L+DIE FY+T I EMP +VA+LI
Sbjct:    4 SPERRAEDW---------PEDKNGPAKEQPNYDGPPGMEPEGALDTNWHQVVESFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTTVRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGSNVVVGTPGRVYDMITRRALRANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEEVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHRIGRGGRFGRKGIAINFVTEADKRALKDIEDFYHTSISEMPSDVANLI 376

[Close]

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Match: gi|521033692|gb|EPQ15477.1| (Eukaryotic initiation factor 4A-I [Myotis brandtii])

HSP 1 Score: 485.337 bits (1248), Expect = 1.014e-169
Identity = 253/344 (73.55%), Postives = 284/344 (82.56%), Query Frame = 0

Query:   41 MDPDGVIDSNWNHVCESFDDMELREELLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAACQALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLEA-GQHIVVGTPGRVFDMISRKVLRPQDIKMFVLDEADEMLSRGFKDQIYDVFRHLNTTIQVVLLSATMPIEVLE----------------------------------HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFITDDDKRTLQDIEKFYNTRIDEMPMNVADLI 349
            M+P+GVI+SNWN + +SFDDM L E LLRGIYAYGFEKPSAIQQRAI+PC+KG DVIAQAQSGTGKTATF+ISILQQI+  L A QAL+LAPTRELAQQIQKVVMALGDYMGA CHACIGGT+VR +++KL+    HI+VGTPGRVFDM++R+ L P+ IKMFVLDEAD+MLSRGFKDQIYD+F+ LN+  QVVLLSATMP +VLE                                  HGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAIN +T++DKRTL+DIE FYNT I+EMP+NVADLI
Sbjct:    1 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADKMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 344

The following BLAST results are available for this feature:

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
BLAST of eukaryotic initiation factor 4a-ii vs. nr

BLAST of eukaryotic initiation factor 4a-ii vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000007706	6.692e-24	32.50	supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 ...	[more]
EMLSAG00000006615	2.427e-23	34.39	supercontig:LSalAtl2s:LSalAtl2s364:491177:493327:-...	[more]
EMLSAG00000001805	3.648e-23	31.66	supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1...	[more]
EMLSAG00000000395	2.273e-22	31.58	supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:...	[more]
EMLSAG00000012740	2.203e-21	45.36	supercontig:LSalAtl2s:LSalAtl2s967:89676:95604:1 g...	[more]

Pages

BLAST of eukaryotic initiation factor 4a-ii vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|2507330\|sp\|P10630.2\|IF4A2_MOUSE	1.541e-138	58.38	RecName: Full=Eukaryotic initiation factor 4A-II; ...	[more]
gi\|82213243\|sp\|Q8JFP1.1\|IF4A2_CHICK	2.002e-138	58.38	RecName: Full=Eukaryotic initiation factor 4A-II; ...	[more]
gi\|124217\|sp\|P27639.1\|IF4A_CAEEL	1.040e-132	53.21	RecName: Full=Eukaryotic initiation factor 4A; Sho...	[more]
gi\|73621050\|sp\|Q4R8K5.1\|IF4A1_MACFA	6.625e-130	55.84	RecName: Full=Eukaryotic initiation factor 4A-I; S...	[more]
gi\|46397463\|sp\|P60842.1\|IF4A1_HUMAN	6.771e-130	55.84	RecName: Full=Eukaryotic initiation factor 4A-I; S...	[more]
gi\|31077172\|sp\|P29562.2\|IF4A1_RABIT	9.148e-130	55.84	RecName: Full=Eukaryotic initiation factor 4A-I; S...	[more]
gi\|158514251\|sp\|A5A6N4.1\|IF4A1_PANTR	2.793e-129	55.58	RecName: Full=Eukaryotic initiation factor 4A-I; S...	[more]
gi\|74699660\|sp\|Q4P331.1\|IF4A_USTMA	1.450e-128	56.22	RecName: Full=ATP-dependent RNA helicase eIF4A; Al...	[more]
gi\|73621051\|sp\|Q5R5F5.1\|IF4A1_PONAB	3.243e-128	55.58	RecName: Full=Eukaryotic initiation factor 4A-I; S...	[more]
gi\|161789047\|sp\|Q7RV88.2\|IF4A_NEUCR	3.700e-126	54.78	RecName: Full=ATP-dependent RNA helicase eIF4A; Al...	[more]

Pages

BLAST of eukaryotic initiation factor 4a-ii vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|465953010\|gb\|EMP25200.1\|	6.483e-173	67.87	Eukaryotic initiation factor 4A-II [Chelonia mydas...	[more]
gi\|565310262\|gb\|ETE63526.1\|	5.599e-172	73.84	Eukaryotic initiation factor 4A-II [Ophiophagus ha...	[more]
gi\|938051994\|gb\|KPP59149.1\|	1.075e-171	72.99	Eukaryotic initiation factor 4A-II-like [Scleropag...	[more]
gi\|966705803\|gb\|KTG38044.1\|	1.573e-171	72.73	hypothetical protein cypCar_00024873 [Cyprinus car...	[more]
gi\|543381267\|ref\|XP_005533827.1\|	2.385e-171	73.28	PREDICTED: eukaryotic initiation factor 4A-I [Pseu...	[more]
gi\|966706079\|gb\|KTG38320.1\|	3.240e-171	72.44	hypothetical protein cypCar_00016679 [Cyprinus car...	[more]
gi\|431894013\|gb\|ELK03819.1\|	2.727e-170	73.84	Eukaryotic initiation factor 4A-I [Pteropus alecto...	[more]
gi\|556956355\|ref\|XP_005989465.1\|	2.853e-170	72.78	PREDICTED: eukaryotic initiation factor 4A-II isof...	[more]
gi\|914573619\|gb\|KOB76105.1\|	7.920e-170	67.02	Eukaryotic initiation factor 4a [Operophtera bruma...	[more]
gi\|521033692\|gb\|EPQ15477.1\|	1.014e-169	73.55	Eukaryotic initiation factor 4A-I [Myotis brandtii...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold506_size152672	supercontig	scaffold506_size152672:86047..89447 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:organic substance metabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold506_size152672-processed-gene-0.7-mRNA-1	snap_masked-scaffold506_size152672-processed-gene-0.7-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold506_size152672:86047..89447+

gene from alignment at scaffold506_size152672:86047..89447+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold506_size152672-processed-gene-0.7 ID=snap_masked-scaffold506_size152672-processed-gene-0.7|Name=eukaryotic initiation factor 4a-ii|organism=Tigriopus kingsejongensis|type=gene|length=3401bp|location=Sequence derived from alignment at scaffold506_size152672:86047..89447+ (Tigriopus kingsejongensis)
CGTCGGCAGGTTTGTTGCCCGCGTCGCCCTCTTTCCTTCTTTTCACCCAA
AAGTTGCTTCGCTCGACATCATGTCCGACTCTAACGAAAGAAAGTAAGTT
GGGGCGGGGTGGAACCCGGCCCGAGGGAGGTCCAGTCGTGGCGGCGTTCA
GAGGCCAGACCCCCGGGCCCGTCGGTGGGTGGGCGGCGGGCCCGCCAGCC
CCGTGCCGGAGTTGAGGCGGCCGCCCCACATGCCGGGTGCGGCCAGCGAG
CCGGGGTGGAGCCGGGGTGCGACCACGCGACGTCGTCGATGCCGTCGATG
CCATACTCGCGGCCGTCCCCGAGTATGGCACGCCCCGGACAGGCTGAGCC
GCGCCGAGCGGCGTGAGTCATCGGTGTCATCACGGTGACGCTGAACTGAG
CCGCGCCAATTCCGGGAGCGTGCGCTAACCCCGGGTGCTTTATTCGACAG
ATCCCCAGCCCCCCAGGAGGAGTCCTGGAACTCCGACCGGATCCCGGCCG
GCAACCCCGAGGAGCCGCGTGGACCCGCCTATGAAGGCCCGGCCGGCATG
GACCCCGATGGCGTCATCGACTCCAATTGGAACCACGTGTGCGAGAGCTT
CGACGACATGGAATTGCGCGAAGAGTTGCTCCGCGGCATCTACGCCTACG
GCTTCGAGAAGCCTTCGGCCATTCAGCAGCGGGCCATCGTGCCGTGCGTC
AAGGGCCTCGACGTGATCGCCCAGGCTCAATCCGGAACGGGCAAGACGGC
CACCTTTTCCATCTCGATCCTGCAGCAGATCGATACCTCGTTGGCCGCCT
GCCAGGCCCTCATTTTGGCCCCCACGCGTGAGCTGGCCCAACAGATCCAG
AAGGTGGTCATGGCCTTGGGCGACTACATGGGCGCTCAATGCCACGCCTG
CATTGGTGGCACCTCCGTGCGTGAGGATATGCGCAAGCTCGAGGCGGGCC
AACACATTGTCGTGGGTAAGTCGATGGTCTGGGCGAGCCTGAGCCAGTGA
TGGCGTCATGGTATCTCCCGTCCCCAAGGAAATCCGTTGGGGCCGGGTCG
TAAATTGACGCTAGATCAAGTCGAGGTACTGCATCGTTGGTGAGCGGACG
GCACTCGGGGCCGCTCTCCTGGTTACCAGCCTCGGACACGTCGGATCGTC
GCCCACCCCGGTTGATCGTCGCCGATCGGGAGGCCCTTATTCACATCTCC
CGCTCGCGTTGCAGGTACGCCCGGTCGTGTCTTTGACATGATCTCCCGGA
AAGTCCTCCGTCCTCAGGACATCAAGATGTTCGTCCTGGATGAGGCCGAC
GAGATGTTGTCTCGTGGTTTTAAGGACCAGATCTACGATGTCTTCCGACA
TTTGAACACCACCATTCAAGTCGTTCTGCTGTCGGCCACCATGCCCATCG
AGGTGCTGGAGGTGACGACCCGCTTCATGCGCGAGCCCATTCGCATTCTC
GTCAAGAAGGAAGAGCTCACCCTGGAGGGTATTCGCCAATTCTTTGTGGC
TATCGAGCGGGAGGAGTGGAAGTTGGACACCTTGTGCGACCTCTACGAAA
CCCTCACCATCACCCAAGCTGTCATTTTCTGCAATACGCGCAGGAAGGTC
GATTGGCTCACCGAGAAAATGCACGTGCGCGACTTCACCGTGTCGGCCAT
GGTAAGCTTCGCCCACCCCACCGTAATTCACCCAGTCCCATGCGGCTGTT
CCGAAAAAATGTTCACGGTGTCCTATACGTGGATGTTTAAGAAAATCAGC
CAGAGTAACGATGAGGTCCTGGAGCGCCTAGTCTCAATCTACGTCGGTCG
TTCACTCTTCATCTACATAAACATATCTCGTTCTGGGTGGGACCGCCAAT
CTTGACTTGTGCCCCTGGCTCACCCTCTCTCGCCTTTTTCAGCACGGAGA
TATGGACCAGAAGGAGCGTGATGTGATCATGCGCGAGTTCCGCTCTGGTT
CCTCCCGAGTGCTCATCACCACCGACTTGTTGGCCCGTGGCATTGACGTT
CAACAGGTCTCCTTGGTCATCAATTACGACCTCCCGACCAATCGGGAGAA
CTACATTCATAGGTAATTGTCCCCCAATGGCGTTGAAGGCTCACCCCATC
CCATAGGGCCCGTTACGAACCTTGGCTTCATGGCTGACTCTTTGACTTTC
AGAATTGGTCGTGGTGGACGTTTTGGCCGAAAGGGTGTGGCCATCAACTT
CATCACCGATGACGATAAAAGAACCCTACAAGACATTGAAAAGTTTTACA
ATACCCGCATCGATGAGATGCCTATGAACGTGGCTGACTTGATCTAATTC
TGTGAACTAAAGAGAGAAGTTGCATCCTACCAGAAACAAAGAAGATTGAA
AGCGGCCCCCATTTCAGTAATCAAGATTAAAAGTATCAACTCTCAGCCCA
TGCCCAGCTAACGAAATCGAACATTTAACCCGGACTATCCCTCGAGGTGT
TCCCATACCCTTTTGAGAGACTCCGTGATCACTCGTGTTCCCTGTGGTAT
GTCGAATCCTCGGTCCAAACTTTTCGGCACCTGGGACATTCAGTCCATAT
GCTTATTTTCCTTGACCTGGCCCAAAAGATTGCACGGCCTTTGACATGTC
GTGCAACACGATTTCGACTTAAGGCAACGTTCATCTTGGAGCGAAAGTAC
GACCTTGAGGTTTCATCTAACGTTGCTAATGCAGCTCGGACATTGACCGG
AAGGGTTTTTTATTGGGGGGGGGGGGCGCTTGTTTGATGTTAGTCTCCAA
TCTTACTGTTCGGTCACAGGGATTGGCGACAGGAAAATCAGGTTTCGTAA
TGGGCTAGGATAAGAAGGCCGATAAGGCCGGTCAAGTAATTCCGTCACTC
CGGTTCGAAAAGTTTGGATCCAATCATCTCGTCATATTTCAAGGATCCAG
CGCCAGCCTTCGGTCTCATCGATTGTGTGCTTCAGTCTAACCTAGCGATC
GTCCGTCTTGTGAAATATGGCAAACTGTTCAGATACCCTGTTCGATGGGC
CCAAAAAGCCACCACGCCTCTTCTGCGATCCTCTAGAGATGTCTCTCTCC
GCACTCTTACTCAGAGATGCCAATCCCATCCCTCGCGCCAATTCTAAAAT
CTACATTGGCCTCTGGAGAGGATTTTTCAATCCCAAGCGAGTCCGCCGAA
AACCCAAATGTGTGGAAGAAGTTGACTTGTCATCGTCCCCAATTTCTATC
GAGTGCCTCAAAACGCACCGATTCCACCAATTTTACCTCTTCATTCGTGT
AGTCCTTTTAGCCCGTTCTCGTACATTATGATTTTCCTAGGCTTATCCTG
CTTCAGGAGTCCTTCATTTTGCCAATGTCTGCTTGTGAGCGTATCTTCAA
CGCTCTGGTTTATTTTCGTAAAATATAGCTTTCTTTCCCATAATTTCAAA
A

Synonyms

The feature 'eukaryotic initiation factor 4a-ii' has the following synonyms


Synonym
Tk07577

Add to Basket

Pages

Pages

Pages

Search form