b12-dependent methionine synthase, snap_masked-scaffold5557_size4524-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview
Nameb12-dependent methionine synthase
Unique Namesnap_masked-scaffold5557_size4524-processed-gene-0.0
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|3122391|sp|O33465.1|METH_PSEPU (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 174.481 bits (441), Expect = 1.311e-51
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV++F  HA+LC RYGAAVVVMAFDEVGQADT  RK +IC R+YDILVN+VGFPP+DIIFDPNIFAVATG+EEHNNY +DFIEA   I+D LPHA+ S G  N
Sbjct:  462 MKEGVEQFKHHARLCKRYGAAVVVMAFDEVGQADTAARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAYIRDHLPHALTSGGVSN 567
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|75463102|sp|Q9AJQ8.1|METH_ALIFS (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 167.933 bits (424), Expect = 3.427e-48
Identity = 76/106 (71.70%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++F+  AKL  RYGAAV+VMAFDEVGQADT ERK++ICT AY+ILV++VGFPP+DIIFDPNIFAVATG++EHNNY +DFIEA   IK TLPHAM+S G  N
Sbjct:  461 LKEGKEKFVHQAKLIRRYGAAVIVMAFDEVGQADTRERKIEICTNAYNILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFIEAVGDIKRTLPHAMISGGVSN 566
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|75431838|sp|Q5E814.1|METH_VIBF1 (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 167.933 bits (424), Expect = 3.495e-48
Identity = 76/106 (71.70%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++F+  AKL  RYGAAV+VMAFDEVGQADT ERK++ICT AY+ILV++VGFPP+DIIFDPNIFAVATG++EHNNY +DFIEA   IK TLPHAM+S G  N
Sbjct:  461 LKEGKEKFVHQAKLIRRYGAAVIVMAFDEVGQADTRERKIEICTNAYNILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFIEAVGDIKRTLPHAMISGGVSN 566
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|34395941|sp|P13009.5|METH_ECOLI (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12-dependent; Short=MS)

HSP 1 Score: 165.236 bits (417), Expect = 2.865e-47
Identity = 77/106 (72.64%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGVD FI HAKL  RYGAAVVVMAFDE GQADT  RK++IC RAY IL  +VGFPP+DIIFDPNIFAVATG+EEHNNY  DFI A + IK  LPHA++S G  N
Sbjct:  459 MKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSN 564
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|81756509|sp|Q7MHB1.1|METH_VIBVY (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 164.851 bits (416), Expect = 3.444e-47
Identity = 74/106 (69.81%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++F++ AKL  RYGAAV+VMAFDEVGQADT ERK++ICT+AY ILV++VGFPP+D+IFDPNIFAVATG++EHNNY +DFIEA   IK  LPHAM+S G  N
Sbjct:  460 LKEGKEKFVEQAKLIRRYGAAVIVMAFDEVGQADTRERKLEICTKAYRILVDEVGFPPEDVIFDPNIFAVATGIDEHNNYAVDFIEAVADIKRDLPHAMISGGVSN 565
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|81587851|sp|Q8DCJ7.1|METH_VIBVU (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 164.851 bits (416), Expect = 3.650e-47
Identity = 74/106 (69.81%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++F++ AKL  RYGAAV+VMAFDEVGQADT ERK++ICT+AY ILV++VGFPP+D+IFDPNIFAVATG++EHNNY +DFIEA   IK  LPHAM+S G  N
Sbjct:  460 LKEGKEKFVEQAKLIRRYGAAVIVMAFDEVGQADTRERKLEICTKAYRILVDEVGFPPEDVIFDPNIFAVATGIDEHNNYAVDFIEAVADIKRDLPHAMISGGVSN 565
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|81623236|sp|Q9KUW9.1|METH_VIBCH (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 164.466 bits (415), Expect = 5.327e-47
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++FI  AKL  RYGAAV+VMAFDEVGQADT ERK++IC RAY ILV++VGFPP+DIIFDPNIFAVATG++EHNNY LDFI A   IK  LPHAM+S G  N
Sbjct:  460 LKEGKEKFIAQAKLVRRYGAAVIVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVADIKRELPHAMISGGVSN 565
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|17865736|sp|P37586.3|METH_SALTY (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 163.696 bits (413), Expect = 9.348e-47
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV+ FI HAKL  RYGAAVVVMAFDE GQADT  RK++IC RAY IL  +VGFPP+DIIFDPNIFAVATG+EEHNNY  DFI A + IK  LPHA++S G  N
Sbjct:  459 MKEGVEAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSN 564
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|81726828|sp|Q87L95.1|METH_VIBPA (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 160.614 bits (405), Expect = 1.220e-45
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG ++F++ AKL  RYGAAV+VMAFDEVGQA+T  RK++ICT AY ILV++VGFPP+DIIFDPNIFAVATG++EHNNY +DFIEA   IK  LPHAM+S G  N
Sbjct:  460 LKEGKEKFVEQAKLIRRYGAAVIVMAFDEVGQAETRTRKLEICTNAYRILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFIEAVADIKRDLPHAMISGGVSN 565
[Close]
BLAST of b12-dependent methionine synthase vs. SwissProt
Match: gi|81622416|sp|Q9I2Q2.1|METH_PSEAE (RecName: Full=Methionine synthase; AltName: Full=5-methyltetrahydrofolate--homocysteine methyltransferase; AltName: Full=Methionine synthase, vitamin-B12 dependent; Short=MS)

HSP 1 Score: 159.073 bits (401), Expect = 3.833e-45
Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV+ F  HA+LC RYGAAVVVMAFDE GQADT  RK +IC R+YDILV++VGFPP+DIIFD NIFA+ATG+EEHNNY +DFI A   I+D LP+A+ S G  N
Sbjct:  466 MKEGVEAFKHHARLCKRYGAAVVVMAFDEDGQADTQARKEEICKRSYDILVDEVGFPPEDIIFDANIFAIATGIEEHNNYAVDFINACAYIRDNLPYALSSGGVSN 571
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|551333882|ref|WP_022953319.1| (methionine synthase [Leucothrix mucor])

HSP 1 Score: 200.675 bits (509), Expect = 3.644e-57
Identity = 91/106 (85.85%), Postives = 101/106 (95.28%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV++FI+HAKLCMRYGAAVVVMAFDE GQADTI+RKV+ICTRAY+ILVN+VGFPPQDIIFDPNIFA+ATGMEEHNNYG+DFIEAT+QIK TLPHAMVS G  N
Sbjct:  459 MKEGVEQFIQHAKLCMRYGAAVVVMAFDEEGQADTIDRKVEICTRAYNILVNEVGFPPQDIIFDPNIFAIATGMEEHNNYGIDFIEATRQIKQTLPHAMVSGGLSN 564
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1192424911|gb|OTL04049.1| (hypothetical protein B9X91_18135, partial [Acinetobacter baumannii])

HSP 1 Score: 171.014 bits (432), Expect = 5.936e-52
Identity = 76/106 (71.70%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            +KEG DEF++ A+LC +YGAA++VMAFDEVGQADT ERK +IC R+YDILVN+VGFP +DIIFDPN+FAVATG+EEHNNY +DFIEAT  IK  LPHAM+S G  N
Sbjct:   16 LKEGYDEFVEKARLCRQYGAAIIVMAFDEVGQADTAERKREICKRSYDILVNEVGFPAEDIIFDPNVFAVATGIEEHNNYAVDFIEATGWIKQNLPHAMISGGVSN 121
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1067640637|emb|SCN47506.1| (5-methyltetrahydrofolate--homocysteine methyltransferase [methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen)])

HSP 1 Score: 175.637 bits (444), Expect = 9.867e-51
Identity = 81/106 (76.42%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEG D FIKHAKL  RYGAAV+VMAFDE GQADT ++KV IC RAY ILV QVGFPPQDIIFDPNIFA+ATG++EHNNYG+DFIEAT++IK T PHAM+S G  N
Sbjct:  250 MKEGEDAFIKHAKLVRRYGAAVIVMAFDEEGQADTYDKKVTICQRAYKILVEQVGFPPQDIIFDPNIFAIATGIDEHNNYGVDFIEATREIKRTCPHAMISGGVSN 355
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|518704229|ref|WP_019865328.1| (methionine synthase [Methylovulum miyakonense])

HSP 1 Score: 181.03 bits (458), Expect = 2.682e-50
Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEG + FIKHAKL  RYGAAV+VMAFDE GQADT  RKV+ICTRAY ILV Q+GFPP+DIIFDPNIFAVATG+EEHNNYG+DFIEAT+ IK TLPHA+VS G  N
Sbjct:  458 MKEGEEAFIKHAKLVKRYGAAVIVMAFDEAGQADTQARKVEICTRAYKILVGQIGFPPEDIIFDPNIFAVATGIEEHNNYGVDFIEATRTIKQTLPHALVSGGVSN 563
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1308599160|gb|PKL94258.1| (hypothetical protein CVV19_22105, partial [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-9])

HSP 1 Score: 171.785 bits (434), Expect = 2.927e-50
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV++F  HAKLC RYGAAVVVMAFDEVGQADT  RK +IC R+YDILVN+VGFPP+DIIFDPNIFAVATG+EEHNNY +DFIEA   I+D LP+A+ S G  N
Sbjct:   88 MKEGVEQFKHHAKLCKRYGAAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAFIRDNLPYALSSGGVSN 193
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1232427179|gb|OYW88292.1| (methionine synthase, partial [Pseudomonadales bacterium 32-61-5])

HSP 1 Score: 172.17 bits (435), Expect = 3.480e-50
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV++F + A+LC RYGAAVVVMAFDE GQADT  RK +IC R+YDILVN+VGFPPQDIIFDPNIFA+ATG+EEHNNY +DFIEA   I+D LPHA+ S G  N
Sbjct:  119 MKEGVEQFKQQARLCKRYGAAVVVMAFDEAGQADTAARKKEICKRSYDILVNEVGFPPQDIIFDPNIFAIATGIEEHNNYAVDFIEACAYIRDELPHALTSGGVSN 224
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|519191220|gb|EPM78742.1| (B12-dependent methionine synthase, partial [Pseudomonas syringae pv. actinidiae ICMP 18804])

HSP 1 Score: 171.014 bits (432), Expect = 5.205e-50
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGV++FI HA+LC RYGAAVVVMAFDE GQADT  RK +IC R+YDILVN+VGFPP+DIIFDPNIFA+ATG+EEHNNY +DFI A   I+D LPHA+ S G  N
Sbjct:  135 MKEGVEQFIHHARLCKRYGAAVVVMAFDEQGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINACAYIRDELPHALTSGGVSN 240
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|661518563|gb|KEP73033.1| (hypothetical protein HR12_21205 [Microbacterium sp. SUBG005])

HSP 1 Score: 166.777 bits (421), Expect = 5.744e-50
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEGVD FI HAK+  RYGAAVVVMAFDEVGQADT ERK++IC RAY IL  +VGFPP+DIIFDPNIFAVATG+EEHNNY  DFI A + IK  LPHA++S G  N
Sbjct:    1 MKEGVDIFIHHAKMVRRYGAAVVVMAFDEVGQADTRERKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSN 106
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1343577055|gb|PPD47459.1| (methionine synthase [Methylobacter sp.])

HSP 1 Score: 179.874 bits (455), Expect = 7.212e-50
Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEG + FIKHAKL  RYGAAV+VMAFDE GQADT  RKV+ICTRAY ILV Q+GFPP+DIIFDPNIFAVATG+EEHNNYG+DFIEAT+ IK TLPHA+VS G  N
Sbjct:  458 MKEGEEAFIKHAKLVKRYGAAVIVMAFDEAGQADTQARKVEICTRAYKILVEQIGFPPEDIIFDPNIFAVATGIEEHNNYGVDFIEATRIIKQTLPHALVSGGVSN 563
[Close]
BLAST of b12-dependent methionine synthase vs. nr
Match: gi|1154831779|ref|WP_078744934.1| (methionine synthase [Oceanospirillum multiglobuliferum] >gi|1152150252|emb|SJZ85172.1| methionine synthase (B12-dependent) [Oceanospirillum multiglobuliferum] >gi|1163323170|gb|OPX55095.1| methionine synthase [Oceanospirillum multiglobuliferum])

HSP 1 Score: 179.874 bits (455), Expect = 7.428e-50
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKEGVDEFIKHAKLCMRYGAAVVVMAFDEVGQADTIERKVDICTRAYDILVNQVGFPPQDIIFDPNIFAVATGMEEHNNYGLDFIEATQQIKDTLPHAMVSAGTVN 106
            MKEG D F  HAKLCMRYGAA++VMAFDE GQADT  RK++IC R+YDILVN+VGFP +DIIFDPNIFAVATG+EEHNNY +DFIEAT+ IKD LPHAM+S G  N
Sbjct:  461 MKEGEDAFRHHAKLCMRYGAAIIVMAFDEAGQADTFARKIEICKRSYDILVNEVGFPAEDIIFDPNIFAVATGIEEHNNYAVDFIEATRWIKDNLPHAMISGGVSN 566
The following BLAST results are available for this feature:
BLAST of b12-dependent methionine synthase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of b12-dependent methionine synthase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
gi|3122391|sp|O33465.1|METH_PSEPU1.311e-5174.53RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|75463102|sp|Q9AJQ8.1|METH_ALIFS3.427e-4871.70RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|75431838|sp|Q5E814.1|METH_VIBF13.495e-4871.70RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|34395941|sp|P13009.5|METH_ECOLI2.865e-4772.64RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|81756509|sp|Q7MHB1.1|METH_VIBVY3.444e-4769.81RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|81587851|sp|Q8DCJ7.1|METH_VIBVU3.650e-4769.81RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|81623236|sp|Q9KUW9.1|METH_VIBCH5.327e-4771.70RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|17865736|sp|P37586.3|METH_SALTY9.348e-4771.70RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|81726828|sp|Q87L95.1|METH_VIBPA1.220e-4568.87RecName: Full=Methionine synthase; AltName: Full=5... [more]
gi|81622416|sp|Q9I2Q2.1|METH_PSEAE3.833e-4568.87RecName: Full=Methionine synthase; AltName: Full=5... [more]

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BLAST of b12-dependent methionine synthase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|551333882|ref|WP_022953319.1|3.644e-5785.85methionine synthase [Leucothrix mucor][more]
gi|1192424911|gb|OTL04049.1|5.936e-5271.70hypothetical protein B9X91_18135, partial [Acineto... [more]
gi|1067640637|emb|SCN47506.1|9.867e-5176.425-methyltetrahydrofolate--homocysteine methyltrans... [more]
gi|518704229|ref|WP_019865328.1|2.682e-5078.30methionine synthase [Methylovulum miyakonense][more]
gi|1308599160|gb|PKL94258.1|2.927e-5074.53hypothetical protein CVV19_22105, partial [Gammapr... [more]
gi|1232427179|gb|OYW88292.1|3.480e-5072.64methionine synthase, partial [Pseudomonadales bact... [more]
gi|519191220|gb|EPM78742.1|5.205e-5072.64B12-dependent methionine synthase, partial [Pseudo... [more]
gi|661518563|gb|KEP73033.1|5.744e-5073.58hypothetical protein HR12_21205 [Microbacterium sp... [more]
gi|1343577055|gb|PPD47459.1|7.212e-5078.30methionine synthase [Methylobacter sp.][more]
gi|1154831779|ref|WP_078744934.1|7.428e-5075.47methionine synthase [Oceanospirillum multiglobulif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold5557_size4524supercontigscaffold5557_size4524:86..1789 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold5557_size4524-processed-gene-0.0-mRNA-1snap_masked-scaffold5557_size4524-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold5557_size4524:86..1789+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold5557_size4524-processed-gene-0.0 ID=snap_masked-scaffold5557_size4524-processed-gene-0.0|Name=b12-dependent methionine synthase|organism=Tigriopus kingsejongensis|type=gene|length=1704bp|location=Sequence derived from alignment at scaffold5557_size4524:86..1789+ (Tigriopus kingsejongensis)
ATGAAAGAAGGCGTGGACGAGTTCATCAAGCACGCTAAATTGTGCATGCG
CTACGGTGCAGCGGTTGTGGTGATGGCGTTTGACGAAGTCGGTCAGGCAG
ACACGATTGAGCGTAAAGTTGACATCTGTACCCGTGCTTACGACATCCTT
GTGAATCAAGTGGGTTTCCCACCGCAAGACATTATTTTCGACCCTAATAT
CTTCGCGGTTGCGACGGGTATGGAAGAGCATAACAACTACGGTTTGGACT
TCATCGAAGCGACACAGCAGATCAAAGATACGCTGCCTCACGCAATGGTG
TCAGGTGGTTTGTCGAACGTATCGTTCTCATTCCGTGGTAACAACCCTGT
TCGTGAAGCGATTCACGCGGTATTCCTATTCCACGCGATCAAAGCGGGTA
TGGACATGGGTATCGTTAACGCAGGTCAGCTGGCGATTTACGAAGACATT
CCAACAAAACTACGTGATGCGGTAGAAGATGTAATTTTGAACCGTAACGC
GGGCGCAACAGAAGCATTACTAGACATCGCTGAAGAGTTCCGTGGTGACG
GCTCTGTTGCTGAGAAGCAAGATGAAGAGTGGCGTTCACTACCTGTGAAC
AAGCGTCTTGAGCACTCATTGGTTAAGGGTATTACTGAGTTCATTACCGA
AGATACTGCTGAGGCGCTGGAGGCTGTTGGCCGCCCGCTTGAGCTTATCG
AAGGCCCACTAATGGCGGGTATGAACGTCGTTGGTGACTTATTCGGTGCA
GGTAAGATGTTCCTGCCACAGGTTGTTAAGTCTGCCCGTGTAATGAAGCA
ATCGGTGGCTTACCTTGAGCCGTTTATGGATGCTGAGAAAGATGGCGTTG
CACAGTCAAATGGCCGTGTGATCATGGCGACAGCTAAGGGTGACGTTCAC
GACATTGGTAAAAACATCGTGGGTGTTGTTCTACAGTGTAATGGTTTTGA
AGTGATCGACTTAGGCGTTATGTGTCAGGCGGAAACGATCTTTGCGGCAG
CGCGTGAGCATAATGCGGATGTCATTGGTATTTCTGGTTTGATCACACCA
TCGCTTGAAGAGATGACGCACGTTGCAAAAGAAATGGAACGTCAAGGCTT
TGATATCCCGCTTATGATTGGTGGTGCTACAACGTCTAAGATGCATACGG
CGGTTAAAATTGCGCCTCACTACAAAGAGCCAGTGGTTTATGTTGCTGAT
GCGTCACGTTCTGTGGGTGTGGTGAGTAGCCTATTGAGTAAAACGCTACG
TGAGCCTTTCTTGGCTGATTTGAAAACGGAATACGATCAGTACCGTGAGC
GTTTTGAAGCGAAGATGAAGAAGCAAGACTTCCTACGTCTTGAGATCGCA
CGTTCAAACAAGCTAGCGACTGACTGGGCACACTACGAAGTGACTAAGCC
AGCGGTTGAGGGCGTACAGGTTATCGAGAAGATGGACTTGCGTGTACTAG
CCGAGTTAATCGACTGGACACCGTTCTTCCACACATGGCAGCTACGTAAG
AAGTACCCACAGATTCTTGACGATGAAGAGTTAGGTGAAGAAGCGACTAA
GCTATTCGCTGATGCAAAACTGATGATCGAGCGATTCATTGAGAATGATA
CGGTTCAGGCACACGGTGTGTTTGGTATCTTCCCAGCCGGTACGGTTAAC
GACGACGATATCGAGATTTATACGGATGAGTCTCGCTCTGAAGTGTTTGA
TACG
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Synonyms
The feature 'b12-dependent methionine synthase' has the following synonyms
Synonym
Tk10944
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