bcs-1 protein, snap_masked-scaffold558_size137302-processed-gene-0.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of bcs-1 protein vs. L. salmonis genes
Match: EMLSAG00000003042 (supercontig:LSalAtl2s:LSalAtl2s172:15389:15775:-1 gene:EMLSAG00000003042 transcript:EMLSAT00000003042 description:"maker-LSalAtl2s172-augustus-gene-0.3") HSP 1 Score: 83.5741 bits (205), Expect = 5.297e-22 Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 0 Query: 2 MDVFIALSALLALACAAPADPYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQ 94 M V SAL+++ A+ Y G NY +GY V Y+G NF E+R+GY TNG Y V LPDGR Q VTY+V + +SGY+ADV+ Sbjct: 1 MKVLAIFSALISVIAASG---------YGSGHTNYNFGYKVNGGYSGANFGHQESRNGYGTNGQYHVNLPDGRLQTVTYSVDNGHSGYLADVK 84
BLAST of bcs-1 protein vs. L. salmonis genes
Match: EMLSAG00000000725 (supercontig:LSalAtl2s:LSalAtl2s1115:196876:200911:1 gene:EMLSAG00000000725 transcript:EMLSAT00000000725 description:"augustus-LSalAtl2s1115-processed-gene-1.4") HSP 1 Score: 84.7297 bits (208), Expect = 5.856e-22 Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0 Query: 33 PANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADV 93 P YQY YAV DDYAG+NF ANE RDGYAT+G VALPDGR Q V YTV+D SG+VADV Sbjct: 96 PPTYQYQYAVADDYAGLNFGANEGRDGYATSGEXSVALPDGRIQTVKYTVSDAQSGFVADV 156
BLAST of bcs-1 protein vs. L. salmonis genes
Match: EMLSAG00000005115 (supercontig:LSalAtl2s:LSalAtl2s26:20671:21565:1 gene:EMLSAG00000005115 transcript:EMLSAT00000005115 description:"snap-LSalAtl2s26-processed-gene-0.7") HSP 1 Score: 83.5741 bits (205), Expect = 7.083e-22 Identity = 53/119 (44.54%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 2 MDVFIALSALLALACAAPADPYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQPAPYKPAPAPYQPAPYK 120 M V I LSAL +L P Y+P SY P Y+YGY V DD G F A E+ +G+ T G Y V LPDGR Q V Y D YSG++ADV Y GY K AP Y+ K Sbjct: 1 MKVLIILSALASLGSTRPQYGYNPV-SYNT-PRYYKYGYDVYDDXHGTKFGAYESSNGHDTTGEYHVQLPDGRLQTVNYR-DDGYSGFIADVSYSGYGKHSSHAPIHNLGYGYRGGSNK 116
BLAST of bcs-1 protein vs. L. salmonis genes
Match: EMLSAG00000001951 (supercontig:LSalAtl2s:LSalAtl2s1346:13820:14632:1 gene:EMLSAG00000001951 transcript:EMLSAT00000001951 description:"augustus-LSalAtl2s1346-processed-gene-0.2") HSP 1 Score: 85.1149 bits (209), Expect = 3.796e-21 Identity = 78/180 (43.33%), Postives = 91/180 (50.56%), Query Frame = 0 Query: 23 YH-PAPSYQ----EGPAN-YQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAK--EYQPAP------------------------------------------YKPAPAP-YQPAP-YKAA--PAYKPAP---YQPAPAYKPAPYQPAP 145 YH PAP+Y+ E PA Y + V DDY G NF A E DG T+G Y+VALPDGR Q V+YTV D Y+G+VADVQYEG +Y+P P Y PAPAP Y+PAP YK A PAYKPAP Y+P PA P Y+P P Sbjct: 74 YHGPAPAYKPAKYEXPAKPYAFQXGVADDYTGSNFSAEENADGKITSGSYKVALPDGRIQTVSYTV-DAYNGFVADVQYEGTPVYPKYEPKPSAYKPAPYHAPAPAPYHAPAPAYKPAPYHAPAPAYKPAPAPSYNPAPAPSYKPAPSYKTAPIPAYKPAPPPTYEPTPA--PTTYEPXP 250
BLAST of bcs-1 protein vs. L. salmonis genes
Match: EMLSAG00000009891 (supercontig:LSalAtl2s:LSalAtl2s643:441816:442099:1 gene:EMLSAG00000009891 transcript:EMLSAT00000009891 description:"augustus-LSalAtl2s643-processed-gene-4.6") HSP 1 Score: 79.7221 bits (195), Expect = 5.423e-21 Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 0 Query: 2 MDVFIALSALLALACA--------APADPYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGG 65 M FIAL+ LAL A +PA PYHPAPSY E PA YQY YA++DDY+GVNF A+EARDGYAT G Sbjct: 1 MKTFIALTTFLALVVADHTAPYHPSPA-PYHPAPSYNEVPAPYQYQYAIKDDYSGVNFGADEARDGYATKGS 71
BLAST of bcs-1 protein vs. SwissProt
Match: gi|75026432|sp|Q9V7U0.1|RESIL_DROME (RecName: Full=Pro-resilin; Flags: Precursor) HSP 1 Score: 58.151 bits (139), Expect = 1.583e-9 Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 33 PANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKE 101 PA Y++ Y V+D +G++F +E RDG T G Y V LPDGR QIV Y D GY ++YEG A + Sbjct: 342 PAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEA--DQQGYRPQIRYEGDAND 408
BLAST of bcs-1 protein vs. SwissProt
Match: gi|113011|sp|P26967.1|CU20_TENMO (RecName: Full=Adult-specific cuticular protein ACP-20; Flags: Precursor) HSP 1 Score: 51.6026 bits (122), Expect = 1.755e-7 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0 Query: 33 PANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYA 99 PA+YQ+ Y V+D G Q E R G G Y +A PDG ++V YT ADD++G+ A V G+A Sbjct: 64 PAHYQFKYGVEDHRTGDRKQQAEVRVGDVVKGEYSLAEPDGTVRVVKYT-ADDHNGFNAVVSRVGHA 129
BLAST of bcs-1 protein vs. nr
Match: gi|1325267609|ref|XP_023342074.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 123.635 bits (309), Expect = 1.320e-32 Identity = 82/142 (57.75%), Postives = 91/142 (64.08%), Query Frame = 0 Query: 1 MMDVFIALSALLALACAAPADPYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAK-EYQPAPYKPAPAPYQPAP--YKAAPA-YK--PAPYQPAPAY 136 M F+ ++AL AL A A Y PSY E PA Y Y YAV DDY+G F A E+RDGY+T+G Y V LPDGR Q V Y VAD YSGYVADV Y G A PAPYK A APY PAP Y APA YK PAPY+ APA+ Sbjct: 1 MFKCFV-VTALFALTAADNAPRYGAEPSYDE-PAVYSYNYAVADDYSGSRFNAGESRDGYSTSGSYSVNLPDGRIQTVNYKVADAYSGYVADVTYSGEASYSSAPAPYKAASAPYNPAPASYNPAPASYKASPAPYKAAPAF 140
BLAST of bcs-1 protein vs. nr
Match: gi|155966288|gb|ABU41097.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 112.849 bits (281), Expect = 8.334e-29 Identity = 60/83 (72.29%), Postives = 66/83 (79.52%), Query Frame = 0 Query: 22 PYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQP 104 PYHPAPSY+E PA YQY YAV D+YAG+NF A+EARDGY+T G Y VALPDGR Q V Y VAD YSGYVADV Y G AK Y+P Sbjct: 43 PYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVAYNVADAYSGYVADVTYSGEAK-YEP 124
BLAST of bcs-1 protein vs. nr
Match: gi|155966279|gb|ABU41093.1| (BCS-1 protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 108.227 bits (269), Expect = 2.469e-27 Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0 Query: 22 PYHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEG 97 PYH APSY+E PA YQY YAV D+YAG+NF A+EARDGY+T G Y VALPDGR Q V Y VAD YSGYVADV Y G Sbjct: 18 PYHAAPSYKEEPAAYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVNYDVADAYSGYVADVTYSG 93
BLAST of bcs-1 protein vs. nr
Match: gi|1325269318|ref|XP_023349653.1| (pro-resilin-like [Eurytemora affinis]) HSP 1 Score: 101.679 bits (252), Expect = 5.217e-25 Identity = 59/114 (51.75%), Postives = 71/114 (62.28%), Query Frame = 0 Query: 2 MDVFIALSALLALACAAPADPYHPAPSYQEG---PANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQPAPYKPAPA 112 M I L++L++ A PA P PA ++E PA Y Y Y V DDY+G F+ NE RDGY+T+G YRVALPDGR QIV Y AD YSG +ADV YEG Y P P +P A Sbjct: 1 MQTVIILASLVSAALCIPAGP--PAYGHEENYDTPAAYAYQYGVADDYSGAKFEQNEKRDGYSTSGSYRVALPDGRIQIVNYHTADAYSGNIADVTYEG-TPTYGPGPARPVHA 111
BLAST of bcs-1 protein vs. nr
Match: gi|1325269322|ref|XP_023349655.1| (pro-resilin-like [Eurytemora affinis]) HSP 1 Score: 99.7525 bits (247), Expect = 2.971e-24 Identity = 54/99 (54.55%), Postives = 65/99 (65.66%), Query Frame = 0 Query: 2 MDVFIALSALLALACAAPADPYHPAPSYQEG---PANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEG 97 M I L++L++ A PA P PA ++E PA Y Y Y V DDY+G F+ NE RDGY+T+G YRVALPDGR QIV Y AD YSG +ADV YEG Sbjct: 1 MQTIIVLASLVSAALCIPAGP--PAYGHEENYDTPAAYAYQYGVADDYSGAKFEQNEKRDGYSTSGSYRVALPDGRIQIVNYHTADAYSGNIADVTYEG 97
BLAST of bcs-1 protein vs. nr
Match: gi|225714062|gb|ACO12877.1| (Cuticle protein 19.8 [Lepeophtheirus salmonis]) HSP 1 Score: 98.5969 bits (244), Expect = 1.764e-23 Identity = 68/118 (57.63%), Postives = 79/118 (66.95%), Query Frame = 0 Query: 23 YHPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAK--EYQPAP-YKPAPAPYQPAPYKAAPAYKPAPYQPAPAYK 137 Y PA +Y E Y Y YAV DDY+GVNF A E D +G Y VALPDGR Q V+YTV D+YSGYVADV+YEG A +Y+P P YK APAP YK+AP PA Y+PAP+YK Sbjct: 35 YKPA-TYDESLKPYNYQYAVNDDYSGVNFSAQENPDAKVISGSYTVALPDGRIQTVSYTV-DEYSGYVADVKYEGTASYPKYEPKPAYKSAPAP----AYKSAPT--PA-YKPAPSYK 143
BLAST of bcs-1 protein vs. nr
Match: gi|1325260651|ref|XP_023329804.1| (cuticle protein 7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 98.5969 bits (244), Expect = 3.229e-23 Identity = 57/103 (55.34%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 24 HPAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQPAPYKPAPAPYQPAPYKAAPAYK 126 H AP+Y + Y + Y V DDY+G F E RDGYAT+G Y VALPDGR Q V Y VAD YSGYVADV Y G AK Y PAPYKAAP YK Sbjct: 55 HAAPAYADEAPVYSFNYGVADDYSGATFNHGENRDGYATSGSYSVALPDGRIQTVNYKVADAYSGYVADVTYSGEAK-------------YAPAPYKAAPVYK 144
BLAST of bcs-1 protein vs. nr
Match: gi|155966352|gb|ABU41128.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 97.4413 bits (241), Expect = 4.175e-23 Identity = 61/108 (56.48%), Postives = 69/108 (63.89%), Query Frame = 0 Query: 25 PAPSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEG---YAKEYQPAPYKPAPAPYQPAPYKAAPAYKPAP 129 PAP Y E P Y + Y V DDY+G F A E D G Y+VALPDGR Q VTYT ADDY+G+VADV+YEG Y K Y+P PA Y+PAPYK AP Y PAP Sbjct: 39 PAP-YDESPKPYAFQYGVADDYSGTKFTAEENXDAKTVAGSYQVALPDGRIQTVTYT-ADDYNGFVADVKYEGVPTYPK------YEPKPAAYKPAPYKPAPVYHPAP 138
BLAST of bcs-1 protein vs. nr
Match: gi|1214785061|gb|ASK05861.1| (chitin-binding protein [Macrobrachium nipponense]) HSP 1 Score: 96.2857 bits (238), Expect = 8.786e-23 Identity = 63/123 (51.22%), Postives = 75/123 (60.98%), Query Frame = 0 Query: 1 MMDVFIALSALLALACAAPADPYH-PAPSYQE----GPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQPAPYKPAPAPYQPAP 118 M I L A++A+A A P YH PAPSY GPA Y + YAV+DDY+G +F E R+GY T G Y V LPDGR Q V Y V D SGY+A V Y+G E Q A Y+P+ A YQPAP Sbjct: 1 MAITVIVLLAVMAVASADPVTSYHAPAPSYHAPAPAGPAQYNFNYAVKDDYSGNDFGHEEGRNGYDTQGSYYVQLPDGRLQKVDYVVKGD-SGYLAQVNYQG---EAQYAKYQPSQA-YQPAP 118
BLAST of bcs-1 protein vs. nr
Match: gi|1325286541|ref|XP_023327997.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 97.4413 bits (241), Expect = 1.320e-22 Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 0 Query: 2 MDVFIALSALLALACAAPADPYHP-----APSYQEGPANYQYGYAVQDDYAGVNFQANEARDGYATNGGYRVALPDGRTQIVTYTVADDYSGYVADVQYEGYAKEYQPAPYKPA 110 M VF+A+S+LLA++ AAPA P P AP Y + PA Y + +AV+DDY N+ E R+GYAT+G Y VALPDGR Q VTY+V D GYVA+V YEG A+ + PY A Sbjct: 15 MKVFLAVSSLLAISAAAPA-PDTPGYAPAAPQYADEPAKYAFNWAVKDDYTNNNYGQEETREGYATSGSYYVALPDGRLQKVTYSVNGD-GGYVAEVSYEGTAQYPEAKPYAAA 126 The following BLAST results are available for this feature:
BLAST of bcs-1 protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of bcs-1 protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of bcs-1 protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold558_size137302:57388..74926- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold558_size137302-processed-gene-0.8 ID=snap_masked-scaffold558_size137302-processed-gene-0.8|Name=bcs-1 protein|organism=Tigriopus kingsejongensis|type=gene|length=17539bp|location=Sequence derived from alignment at scaffold558_size137302:57388..74926- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'bcs-1 protein' has the following synonyms
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