AGAP005256-PA, snap_masked-scaffold583_size130250-processed-gene-0.6 (gene) Tigriopus kingsejongensis

Overview
NameAGAP005256-PA
Unique Namesnap_masked-scaffold583_size130250-processed-gene-0.6
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of AGAP005256-PA vs. SwissProt
Match: gi|75027056|sp|Q9VJK8.2|JHAMT_DROME (RecName: Full=Juvenile hormone acid O-methyltransferase; AltName: Full=Juvenile hormone acid methyltransferase; Short=DmJHAMT)

HSP 1 Score: 111.694 bits (278), Expect = 2.310e-29
Identity = 60/159 (37.74%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHWNS--QELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYG-ERNISFAQMDISQKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLME-FNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            +Q+ DA  IL EFA  + W S  ++ +LD+G GSG+V   F+ P +P        +VG DIS++MV++A  +Y  E    F  +DI  +     ++ RF  V SFYCLHW+++   AL NI+ L++   G+ +L FLA NP++ VY+ +    +WS++M
Sbjct:   13 VQRHDAKLILDEFASTMQWRSDGEDALLDVGSGSGNVLMDFVKPLLPIRG----QLVGTDISSQMVHYASKHYQREERTRFQVLDIGCERLPEELSGRFDHVTSFYCLHWVQNLKGALGNIYNLLKPEGGDCLLAFLASNPVYEVYKILKTNDKWSTFM 167          
BLAST of AGAP005256-PA vs. SwissProt
Match: gi|74797537|sp|Q767F1.1|JHAMT_BOMMO (RecName: Full=Juvenile hormone acid O-methyltransferase; AltName: Full=Juvenile hormone acid methyltransferase; Short=BmJHAMT)

HSP 1 Score: 110.538 bits (275), Expect = 3.830e-29
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHWNS-QELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLMEFNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            LQKRDA   L E A K+ W    + ++D+GC  G VT   L   +PK   +   +VG DIS EMV +A  ++G    SF  +DI   + T  + + F  VFSFY LHWI+D   A  NI  L+   G+ +L+FL   PIF VYR ++   +W S++
Sbjct:   13 LQKRDALRCLEEHANKIKWKKIGDRVIDLGCADGSVTD-ILKVYMPKNYGR---LVGCDISEEMVKYANKHHGFGRTSFRVLDIEGDL-TADLKQGFDHVFSFYTLHWIRDQERAFRNIFNLLGDEGDCLLLFLGHTPIFDVYRTLSHTEKWHSWL 163          
BLAST of AGAP005256-PA vs. SwissProt
Match: gi|82061647|sp|Q91FT7.1|235L_IIV6 (RecName: Full=Putative methyltransferase 235L; Flags: Precursor)

HSP 1 Score: 60.4622 bits (145), Expect = 1.805e-10
Identity = 33/113 (29.20%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   12 REFAPKLHWNSQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLME 124
            + F  +L   S + ++DIGCG+G +T+     S+ K+ +    ++G+D  + M+ +AK  Y   N+ F  MDI  +     + +++  V SF+CL WI +   + H+I  +M+
Sbjct:   35 KNFLDQLQIASNKTVIDIGCGNGKITN--YISSLVKDGS----VIGIDKDSSMIKYAKETYP--NVDFKVMDIQNE----NIDKKYDIVVSFFCLPWIVNKQASFHHISNMMK 135          
BLAST of AGAP005256-PA vs. nr
Match: gi|1059843165|gb|AOG17700.1| (putative juvenile hormone acid methyltransferase, partial [Polypedilum vanderplanki])

HSP 1 Score: 130.183 bits (326), Expect = 3.278e-34
Identity = 66/164 (40.24%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    1 MLQKRDASDILREFAPKLHWN---SQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKI-----PTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLMEFNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            +LQKRDA +I+ EF+   +W    S + +LDIGCGSGDV    + P IP        ++G+DIS EM+ +A  +YG   + F ++DI  ++      T      F+ + SFY LHWI++   AL NIH+L++ NG  +LVFL  NPI+ VY  ++R  ++S YM
Sbjct:   12 VLQKRDAKEIIEEFSSIFNWKWDGSSDALLDIGCGSGDVLYELILPKIPIN----IEVIGIDISKEMIKYANEHYGNEYLKFYKVDIESEMFIDGKTTPIKPESFNFITSFYALHWIQNQRQALSNIHKLLKPNGTCLLVFLVSNPIYDVYTHLSRMKKYSRYM 171          
BLAST of AGAP005256-PA vs. nr
Match: gi|907733020|ref|XP_013114871.1| (PREDICTED: uncharacterized protein LOC106092538 [Stomoxys calcitrans])

HSP 1 Score: 130.568 bits (327), Expect = 4.040e-34
Identity = 69/161 (42.86%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHW--NSQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGER-NISFAQMDIS--QKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLMEF-NGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            +Q+ DA +I+ E+A K+ W  +  + +LD+GCGSGDV   F+ P +PK+  +   IVG DIS++M+  AK  Y       F Q+DI+   K+PT  +   F  V SFYCLHW++D   AL+NI+RL+    G+ +LVFLA NPI+ VY+ +++  +WS YM
Sbjct:   13 VQRHDAEEIIIEYAKKIEWRLDGCDALLDVGCGSGDVLMDFIYPIMPKQFER---IVGTDISDKMIKFAKKCYNSYPQCDFKQLDIASEDKLPT-DLVGAFDHVTSFYCLHWVQDQRQALNNIYRLLHTAGGDCLLVFLAANPIYDVYKILSKSIKWSFYM 169          
BLAST of AGAP005256-PA vs. nr
Match: gi|1355991210|gb|PRD32957.1| (Juvenile hormone acid O-methyltransferase [Nephila clavipes])

HSP 1 Score: 127.487 bits (319), Expect = 4.268e-34
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHWNSQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKIPTMTMT-RRFSKVFSFYCLHWIKDHGIALHNIHRLMEFNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
             Q RDAS IL  +  ++     +++LDIGCG+GDVT+  L P++ +       ++GVD S +MV +A+ +Y   NI +  +DI+  +         F+KVFSFYCLHW+K+   AL NI  LM+  GE +LVF+A+ P+F +Y +MA   +W +YM
Sbjct:   13 FQVRDASQILGVYKKQMSPEDTDIVLDIGCGTGDVTTKILGPTLGRFEL----LLGVDKSRDMVEYAQQHYNVDNIFYEVLDIAGDVSDFKEEWGTFTKVFSFYCLHWVKNLRRALRNIQSLMKNGGETLLVFVAQCPVFEMYERMADDGKWKAYM 164          
BLAST of AGAP005256-PA vs. nr
Match: gi|1344766108|ref|XP_023936434.1| (juvenile hormone acid O-methyltransferase [Bicyclus anynana] >gi|1344766110|ref|XP_023936443.1| juvenile hormone acid O-methyltransferase [Bicyclus anynana] >gi|1344766112|ref|XP_023936451.1| juvenile hormone acid O-methyltransferase [Bicyclus anynana])

HSP 1 Score: 129.028 bits (323), Expect = 7.293e-34
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHW-NSQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLMEFNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            LQKRDA   L E+A K+ W N  + ++DIGCG G VTS  L   +P    K   +VG DIS +MV  A  ++   + SF  +DI  ++P   M   F   FSFY LHWIK    A  NI++L+   G+ +L+FL   P+F VYR +AR P+WS ++
Sbjct:   13 LQKRDALQCLEEYAKKIKWKNDGDTVIDIGCGDGSVTSSILKTFLPYNYKK---LVGCDISEKMVQFANKHHATSHTSFKVLDIEGRLPD-EMRGNFDHAFSFYALHWIKHQETAFTNIYKLLGKGGDCLLIFLGHMPVFDVYRILARSPKWSYWL 164          
BLAST of AGAP005256-PA vs. nr
Match: gi|914567154|gb|KOB71509.1| (Juvenile hormone acid methyltransferase, partial [Operophtera brumata])

HSP 1 Score: 127.487 bits (319), Expect = 7.386e-34
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    2 LQKRDASDILREFAPKLHWNSQELILDIGCGSGDVTSGFLAPSIPKERTKAFNIVGVDISNEMVNHAKTNYGERNISFAQMDISQKIPTMTMTRRFSKVFSFYCLHWIKDHGIALHNIHRLMEFNGEAVLVFLAKNPIFAVYRKMARKPEWSSYM 156
            LQ+RDA   L  +A K+ W   + ++DIGCG G V S  L   +P       N++G DIS +M++ A  N+G+    F  +DI  K+P   +   F   FSFY LHWIK+   A  NI++L+  NG+ +L+FL   PIF VYR++ARK +W +++
Sbjct:   13 LQRRDAIQCLETYARKIKWRKSDRVIDIGCGDGGV-SDILKTYMPVNS----NLLGCDISEKMIDFANINHGDERTEFIVLDIEGKLP-YALRENFDHAFSFYTLHWIKNQETAFRNIYKLLAENGDCLLMFLGHMPIFDVYRRLARKSKWGAWL 161          
The following BLAST results are available for this feature:
BLAST of AGAP005256-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of AGAP005256-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|75027056|sp|Q9VJK8.2|JHAMT_DROME2.310e-2937.74RecName: Full=Juvenile hormone acid O-methyltransf... [more]
gi|74797537|sp|Q767F1.1|JHAMT_BOMMO3.830e-2939.74RecName: Full=Juvenile hormone acid O-methyltransf... [more]
gi|82061647|sp|Q91FT7.1|235L_IIV61.805e-1029.20RecName: Full=Putative methyltransferase 235L; Fla... [more]
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BLAST of AGAP005256-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1059843165|gb|AOG17700.1|3.278e-3440.24putative juvenile hormone acid methyltransferase, ... [more]
gi|907733020|ref|XP_013114871.1|4.040e-3442.86PREDICTED: uncharacterized protein LOC106092538 [S... [more]
gi|1355991210|gb|PRD32957.1|4.268e-3440.38Juvenile hormone acid O-methyltransferase [Nephila... [more]
gi|1344766108|ref|XP_023936434.1|7.293e-3442.31juvenile hormone acid O-methyltransferase [Bicyclu... [more]
gi|914567154|gb|KOB71509.1|7.386e-3440.00Juvenile hormone acid methyltransferase, partial [... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold583_size130250supercontigscaffold583_size130250:129155..129625 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold583_size130250-processed-gene-0.6-mRNA-1snap_masked-scaffold583_size130250-processed-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold583_size130250:129155..129625+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold583_size130250-processed-gene-0.6 ID=snap_masked-scaffold583_size130250-processed-gene-0.6|Name=AGAP005256-PA|organism=Tigriopus kingsejongensis|type=gene|length=471bp|location=Sequence derived from alignment at scaffold583_size130250:129155..129625+ (Tigriopus kingsejongensis)
ATGCTCCAGAAGCGGGATGCTTCGGATATTCTCCGCGAATTTGCGCCCAA GCTTCATTGGAACTCTCAAGAGCTCATCCTGGACATTGGATGCGGCTCCG GGGATGTGACCTCGGGCTTCTTGGCGCCCTCGATTCCCAAGGAGAGGACC AAGGCCTTCAATATTGTCGGAGTGGACATCTCGAATGAAATGGTCAATCA CGCCAAGACCAACTATGGCGAGCGCAACATCTCCTTCGCTCAAATGGACA TCTCCCAGAAGATCCCCACCATGACGATGACGCGGAGGTTCTCCAAGGTC TTCTCATTCTACTGTCTCCACTGGATCAAGGACCACGGTATCGCTCTCCA CAACATCCATCGACTCATGGAGTTCAACGGCGAAGCTGTCCTTGTGTTCT TGGCCAAAAATCCCATTTTCGCCGTCTACCGGAAGATGGCTCGCAAACCC GAGTGGAGCTCCTACATGCTG
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Synonyms
The feature 'AGAP005256-PA' has the following synonyms
Synonym
Tk02146
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