nuclear hormone receptor, snap_masked-scaffold58_size443543-processed-gene-3.1 (gene) Tigriopus kingsejongensis

Overview
Namenuclear hormone receptor
Unique Namesnap_masked-scaffold58_size443543-processed-gene-3.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8")

HSP 1 Score: 141.354 bits (355), Expect = 3.318e-41
Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73
            GDR   RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR
Sbjct:  224 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11")

HSP 1 Score: 100.138 bits (248), Expect = 2.960e-27
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0 
Query:   17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            +HYG  +CEGCK FFKRS+R+ L YQCRG+K+C V +HHRN+CQ+CRL+KC  MGMR +
Sbjct:   93 KHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRRE 151
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7")

HSP 1 Score: 100.138 bits (248), Expect = 8.013e-27
Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GD+   +HYG  +CEGCK FFKRS+R+ L YQCRG++ C + +HHRN+CQ+CRL+KC+ MGMR +
Sbjct:  438 GDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKE 502
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5")

HSP 1 Score: 96.2857 bits (238), Expect = 1.525e-25
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GDR   +HYG  SCEGCKGFFKR++RK+L Y CR N+DC + K  RNRCQYCR  KCL  GM+ +
Sbjct:   95 GDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKRE 159
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 93.5893 bits (231), Expect = 1.360e-24
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0 
Query:    5 ILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            IL  +   +   +HYG  +CEGCK FFKR +R+ L +QCR  K C V +HHRN+CQ+CR +KCL MGM+ +
Sbjct:   73 ILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKE 143
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23")

HSP 1 Score: 88.9669 bits (219), Expect = 8.636e-23
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:   18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            HYG I+CEGCKGFF+RS    + YQC   K+C V + +RNRCQ+CRLQKCLA+GM  D
Sbjct:   58 HYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0")

HSP 1 Score: 88.1965 bits (217), Expect = 1.253e-22
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0 
Query:    9 LSLTRGDRR---HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76
            L L  GDR    HY A++CEGCKGFF+RSI K   Y C+ N DCE+  + R +CQ CRL+KC A GMR++C
Sbjct:  172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAEC 242
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1")

HSP 1 Score: 88.1965 bits (217), Expect = 1.397e-22
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:   17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72
            +HYG  +CEGCKGFFKR+++K   Y C  +K+C V K  RNRCQ+CR QKCLA+GM
Sbjct:  419 QHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGM 474
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13")

HSP 1 Score: 87.4261 bits (215), Expect = 2.489e-22
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73
            GDR   +HYGA SC+GCKGFF+RS+RK+  Y CR N+ C V K  RN C+YCRL+ C+  GM+
Sbjct:  155 GDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMK 217
[Close]
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53")

HSP 1 Score: 87.4261 bits (215), Expect = 2.662e-22
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0 
Query:   13 RGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72
            R    HYG I+CEGCKGFFKR+++ +  Y C  + +CE+ K  RNRCQYCR QKCL  GM
Sbjct:  289 RATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|73620966|sp|Q24142.2|HR78_DROME (RecName: Full=Nuclear hormone receptor HR78; Short=dHR78; AltName: Full=Nuclear receptor XR78E/F; AltName: Full=Nuclear receptor subfamily 2 group D member 1)

HSP 1 Score: 132.88 bits (333), Expect = 5.719e-37
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L L  GDR   RHYGAISCEGCKGFFKRSIRKQLGYQCRG  +CEVTKHHRNRCQ+CRLQKCLA GMRSD
Sbjct:   51 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSD 120
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2)

HSP 1 Score: 127.102 bits (318), Expect = 6.446e-35
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GD+   RHYGAISCEGCKGFFKRSIRK LGY CRGNKDC++ KH+RNRCQYCRLQKCL MGM+SD
Sbjct:   91 GDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSD 155
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|57015416|sp|Q9N4B8.4|NHR41_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-41)

HSP 1 Score: 121.709 bits (304), Expect = 6.539e-33
Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA+SCEGCKGFFKRSIRK++GY CR  KDC VTK HRNRCQYCRL+KCL+MGMRS+
Sbjct:  151 LCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKDCPVTKFHRNRCQYCRLRKCLSMGMRSE 220
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|341942228|sp|Q505F1.3|NR2C1_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2; Short=mTR2)

HSP 1 Score: 117.472 bits (293), Expect = 1.921e-31
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D
Sbjct:  100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVINKHHRNRCQYCRLQRCIAFGMKQD 169
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75066579|sp|Q95K90.1|NR2C1_MACFA (RecName: Full=Nuclear receptor subfamily 2 group C member 1)

HSP 1 Score: 116.701 bits (291), Expect = 3.103e-31
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D
Sbjct:  112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|81902145|sp|Q8VIJ4.1|NR2C1_RAT (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2)

HSP 1 Score: 116.701 bits (291), Expect = 3.286e-31
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D
Sbjct:  100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 169
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|226693548|sp|P13056.2|NR2C1_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2)

HSP 1 Score: 116.701 bits (291), Expect = 3.392e-31
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D
Sbjct:  112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75061946|sp|Q5RCZ5.1|NR2C1_PONAB (RecName: Full=Nuclear receptor subfamily 2 group C member 1)

HSP 1 Score: 116.316 bits (290), Expect = 4.193e-31
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D
Sbjct:  113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 182
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|123892381|sp|Q28CK1.1|NR2C1_XENTR (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Developmental orphan receptor 2; Short=DOR2; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2)

HSP 1 Score: 115.931 bits (289), Expect = 7.556e-31
Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+A+GM+ D
Sbjct:  151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCIALGMKQD 220
[Close]
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|82201033|sp|Q6GN21.1|N2C1A_XENLA (RecName: Full=Nuclear receptor subfamily 2 group C member 1-A; AltName: Full=Developmental orphan receptor 2-A; Short=DOR2-A; Short=xDOR2-A; AltName: Full=Orphan nuclear receptor TR2-A; AltName: Full=Testicular receptor 2-A)

HSP 1 Score: 115.546 bits (288), Expect = 8.949e-31
Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+++GM+ D
Sbjct:  151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCMSLGMKQD 220
[Close]
BLAST of nuclear hormone receptor vs. nr
Match: gi|951536144|ref|XP_014471525.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Dinoponera quadriceps])

HSP 1 Score: 135.191 bits (339), Expect = 1.149e-35
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GDR   RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD
Sbjct:  129 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 193
[Close]
BLAST of nuclear hormone receptor vs. nr
Match: gi|1316138863|ref|XP_023211818.1| (nuclear receptor subfamily 2 group C member 1-A-like [Centruroides sculpturatus])

HSP 1 Score: 135.961 bits (341), Expect = 1.184e-35
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0 
Query:    9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            L +  GD+   RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCL+MGMR+D
Sbjct:  128 LCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLSMGMRAD 197
[Close]
BLAST of nuclear hormone receptor vs. nr
Match: gi|1070176762|ref|XP_018347783.1| (PREDICTED: nuclear receptor subfamily 2 group C member 1-like isoform X9 [Trachymyrmex septentrionalis] >gi|1070208320|ref|XP_018373202.1| PREDICTED: nuclear receptor subfamily 2 group C member 1 isoform X4 [Trachymyrmex cornetzi] >gi|1070208322|ref|XP_018373203.1| PREDICTED: nuclear receptor subfamily 2 group C member 1 isoform X4 [Trachymyrmex cornetzi] >gi|1070208324|ref|XP_018373204.1| PREDICTED: nuclear receptor subfamily 2 group C member 1 isoform X4 [Trachymyrmex cornetzi])

HSP 1 Score: 135.191 bits (339), Expect = 1.196e-35
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GDR   RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD
Sbjct:  108 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 172
[Close]
BLAST of nuclear hormone receptor vs. nr
Match: gi|749747361|ref|XP_011135801.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X6 [Harpegnathos saltator])

HSP 1 Score: 135.576 bits (340), Expect = 1.224e-35
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 
Query:   14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            GDR   RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD
Sbjct:  151 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 215
[Close]
BLAST of nuclear hormone receptor vs. nr
Match: gi|1238856878|ref|XP_022245332.1| (nuclear receptor subfamily 2 group C member 2-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 135.961 bits (341), Expect = 1.274e-35
Identity = 58/74 (78.38%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:    2 PAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75
            P + L  +   +   RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCLAMGMR+D
Sbjct:  140 PPFELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLAMGMRAD 213
The following BLAST results are available for this feature:
BLAST of nuclear hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000124863.318e-4195.24supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1... [more]
EMLSAG000000099412.960e-2764.41supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-... [more]
EMLSAG000000099408.013e-2758.46supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-... [more]
EMLSAG000000019191.525e-2561.54supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1... [more]
EMLSAG000000099691.360e-2450.70supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-... [more]
EMLSAG000000007338.636e-2362.07supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 ... [more]
EMLSAG000000050901.253e-2254.93supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-... [more]
EMLSAG000000130041.397e-2260.71supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 ... [more]
EMLSAG000000073612.489e-2257.14supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1... [more]
EMLSAG000000085432.662e-2256.67supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1... [more]

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BLAST of nuclear hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|73620966|sp|Q24142.2|HR78_DROME5.719e-3784.29RecName: Full=Nuclear hormone receptor HR78; Short... [more]
gi|68566021|sp|Q26622.1|SHR2_STRPU6.446e-3581.54RecName: Full=Orphan steroid hormone receptor 2; A... [more]
gi|57015416|sp|Q9N4B8.4|NHR41_CAEEL6.539e-3372.86RecName: Full=Nuclear hormone receptor family memb... [more]
gi|341942228|sp|Q505F1.3|NR2C1_MOUSE1.921e-3170.00RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|75066579|sp|Q95K90.1|NR2C1_MACFA3.103e-3168.57RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|81902145|sp|Q8VIJ4.1|NR2C1_RAT3.286e-3170.00RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|226693548|sp|P13056.2|NR2C1_HUMAN3.392e-3168.57RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|75061946|sp|Q5RCZ5.1|NR2C1_PONAB4.193e-3168.57RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|123892381|sp|Q28CK1.1|NR2C1_XENTR7.556e-3167.14RecName: Full=Nuclear receptor subfamily 2 group C... [more]
gi|82201033|sp|Q6GN21.1|N2C1A_XENLA8.949e-3165.71RecName: Full=Nuclear receptor subfamily 2 group C... [more]

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BLAST of nuclear hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|951536144|ref|XP_014471525.1|1.149e-3592.31PREDICTED: orphan steroid hormone receptor 2 isofo... [more]
gi|1316138863|ref|XP_023211818.1|1.184e-3582.86nuclear receptor subfamily 2 group C member 1-A-li... [more]
gi|1070176762|ref|XP_018347783.1|1.196e-3592.31PREDICTED: nuclear receptor subfamily 2 group C me... [more]
gi|749747361|ref|XP_011135801.1|1.224e-3592.31PREDICTED: orphan steroid hormone receptor 2 isofo... [more]
gi|1238856878|ref|XP_022245332.1|1.274e-3578.38nuclear receptor subfamily 2 group C member 2-like... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold58_size443543supercontigscaffold58_size443543:330609..331203 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:steroid hormone mediated signaling pathway
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold58_size443543:330609..331203+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold58_size443543-processed-gene-3.1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1|Name=nuclear hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)
ATGCCGGCCTGGATTCTCTCTTGCCTCTCCCTGACCCGAGGAGATCGTGA
CCAAGGGTGCCCTCCGATTATTCAAAGTAGTCAAACAGATTTTGAAATTG
GCTCCCGACTGGGCGTGACCCCCTGAACCTGGGCTTTTCTCCTCTGGAAA
TTGGGGTTGACCTCTGTGCAGGTCAGAATCTGGGGGCCTTCTCCGCTCGT
CATATCATTAGTGATTAAGTGATCAGGGATGCTAAAGAGTTGGAGAAAAC
AACGGCTTTTAATGCGCTTCGTGAGCGCCATTAGGCGATGATGATTAAGA
TATCCGAGTCAGCAGAGCCCTCACACCCATGATTATCCAGGCCCAACGTG
GCCGCCGAATCTCACGCGATGAACATCTCGATCATCTCTTTCCCTTCTTT
CCAGGCCGACATTATGGTGCAATCAGTTGCGAAGGCTGCAAAGGCTTCTT
CAAACGCTCAATCCGCAAACAGCTCGGCTATCAATGCCGAGGCAACAAGG
ACTGTGAGGTGACCAAGCATCATCGGAACCGATGTCAGTACTGCCGACTC
CAGAAGTGTCTGGCCATGGGCATGCGCAGTGATTGTAAGTATTAA
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Synonyms
The feature 'nuclear hormone receptor' has the following synonyms
Synonym
Tk00704
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