sodium calcium exchanger 2-like, snap_masked-scaffold634_size121673-processed-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Match: EMLSAG00000000114 (supercontig:LSalAtl2s:LSalAtl2s101:386569:423164:-1 gene:EMLSAG00000000114 transcript:EMLSAT00000000114 description:"maker-LSalAtl2s101-augustus-gene-4.14") HSP 1 Score: 65.855 bits (159), Expect = 7.207e-14 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 F V +G L+ SVT+Y+ICA+L + +L+ RR + FGNAELGGP K+ S FL+ +W +Y+ STLQ YG+I Sbjct: 768 FNVPAGDLSVSVTLYTICAVLAVLLLLVRRFLGIFGNAELGGPNLGKYISATFLLILWFLYILFSTLQTYGII 840
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Match: EMLSAG00000010807 (supercontig:LSalAtl2s:LSalAtl2s716:164342:182438:-1 gene:EMLSAG00000010807 transcript:EMLSAT00000010807 description:"augustus_masked-LSalAtl2s716-processed-gene-1.1") HSP 1 Score: 53.5286 bits (127), Expect = 1.144e-9 Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI-PG 126 +G VF V GSL FSVTI+ I A+L I +L RR P G ELGGP K S V WI YV +S ++AYGVI PG Sbjct: 1000 QGDVFRVPVGSLGFSVTIFCIEALLAILILXIRR-NPAVG-GELGGPKKYKTISASIFVCFWIFYVFISAMEAYGVIQPG 1077
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|1346653|sp|P48768.1|NAC2_RAT (RecName: Full=Sodium/calcium exchanger 2; AltName: Full=Na(+)/Ca(2+)-exchange protein 2; AltName: Full=Solute carrier family 8 member 2; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 1.203e-12 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 V+G F V++G+LAFSVT++++ A +GI VL+ RR P G ELGGP G K A+ + +W +Y+ ++L+AY I G Sbjct: 843 VQGRPFEVRTGTLAFSVTLFTVFAFVGIAVLLYRRR-PHIG-GELGGPRGPKLATTALFLGLWFLYILFASLEAYCHIRG 920
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|10720116|sp|Q9UPR5.2|NAC2_HUMAN (RecName: Full=Sodium/calcium exchanger 2; AltName: Full=Na(+)/Ca(2+)-exchange protein 2; AltName: Full=Solute carrier family 8 member 2; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 1.300e-12 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 V+G F V++G+LAFSVT++++ A +GI VL+ RR P G ELGGP G K A+ + +W++Y+ ++L+AY I G Sbjct: 843 VQGRPFEVRTGTLAFSVTLFTVFAFVGIAVLLYRRR-PHIG-GELGGPRGPKLATTALFLGLWLLYILFASLEAYCHIRG 920
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|34395973|sp|P57103.2|NAC3_HUMAN (RecName: Full=Sodium/calcium exchanger 3; AltName: Full=Na(+)/Ca(2+)-exchange protein 3; AltName: Full=Solute carrier family 8 member 3; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 1.326e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 ++G F V +G+LAFSVT+++I A + I VL+ RR P G ELGGP G K A+ V +W++Y+ +TL+AY I G Sbjct: 849 LQGQEFHVSAGTLAFSVTLFTIFAFVCISVLLYRRR-PHLG-GELGGPRGCKLATTWLFVSLWLLYILFATLEAYCYIKG 926
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|2498054|sp|P70549.1|NAC3_RAT (RecName: Full=Sodium/calcium exchanger 3; AltName: Full=Na(+)/Ca(2+)-exchange protein 3; AltName: Full=Solute carrier family 8 member 3; Flags: Precursor) HSP 1 Score: 65.855 bits (159), Expect = 1.642e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 ++G F V +G+LAFSVT+++I A + + VL+ RR P G ELGGP G K A+ V +W++YV +TL+AY I G Sbjct: 849 MQGQEFHVSAGTLAFSVTLFTIFAFVCLSVLLYRRR-PHLG-GELGGPRGCKLATTWLFVSLWLLYVLFATLEAYCYIKG 926
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|961512624|sp|S4R2P9.1|NAC3_MOUSE (RecName: Full=Sodium/calcium exchanger 3; AltName: Full=Na(+)/Ca(2+)-exchange protein 3; AltName: Full=Solute carrier family 8 member 3; Flags: Precursor) HSP 1 Score: 65.4698 bits (158), Expect = 2.466e-12 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 ++G F V +G+LAFSVT+++I A + + VL+ RR P G ELGGP G K A+ V +W++Y+ +TL+AY I G Sbjct: 850 MQGQEFHVSAGTLAFSVTLFTIFAFVCLSVLLYRRR-PHLG-GELGGPRGCKLATTWLFVSLWLLYILFATLEAYCYIKG 927
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|1346652|sp|Q01728.3|NAC1_RAT (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 6.913e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 895 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSSLFVLLWLLYIFFSSLEAYCHIKG 970
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|1346648|sp|P48765.1|NAC1_BOVIN (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 7.116e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 894 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKG 969
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|1346649|sp|P48766.1|NAC1_CAVPO (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 7.255e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 894 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKG 969
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|2829482|sp|P70414.1|NAC1_MOUSE (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 7.255e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 894 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSSLFVLLWLLYIFFSSLEAYCHIKG 969
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|12644210|sp|P32418.3|NAC1_HUMAN (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 7.327e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 897 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKG 972
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|1207915723|ref|XP_021346628.1| (sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1207915725|ref|XP_021346629.1| sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1207915727|ref|XP_021346630.1| sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1207915729|ref|XP_021346631.1| sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1207915731|ref|XP_021346632.1| sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1207915733|ref|XP_021346633.1| sodium/calcium exchanger 2-like [Mizuhopecten yessoensis] >gi|1205907089|gb|OWF53725.1| Sodium/calcium exchanger 3 [Mizuhopecten yessoensis]) HSP 1 Score: 85.5001 bits (210), Expect = 8.549e-17 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 29 FLGFEIIPGTNSFLLLVIVRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 FLG + P T + + ++ G F V +GSLAF+V IY+I AIL I LI RR + FGNAELGGPT K+ S F V +W++Y+ LS+LQA G I Sbjct: 741 FLGIGL-PWTIASIYWLVKTGEDFQVPAGSLAFTVIIYTIAAILAILFLIIRRNLSIFGNAELGGPTIPKYVSSFFFVTLWVLYILLSSLQATGKI 835
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|954419196|gb|KRY70817.1| (Sodium/calcium exchanger 1 [Trichinella pseudospiralis]) HSP 1 Score: 85.1149 bits (209), Expect = 1.016e-16 Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAY 121 RG FVV SG + FSVTIY++ +++ I +++ RR +P G AELGGPT KW + L+ W MY+ LS LQAY Sbjct: 765 RGEAFVVHSGDIGFSVTIYTVLSLICIVMMMLRRFLPVLGEAELGGPTIPKWLCSVALILFWFMYILLSALQAY 838
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|405963445|gb|EKC29015.1| (Sodium/calcium exchanger 3 [Crassostrea gigas]) HSP 1 Score: 83.1889 bits (204), Expect = 4.299e-16 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 0 Query: 17 KVVSTQGPHPSSFLGFEIIPGTNS---FLLLVIV----------RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 K ST H S +G + G+NS FL L + +G F V +GSL FSV +++ICAI+ + +++ RR + FGNAELGGP K SG+F++ +W++YV L++LQ Y I G Sbjct: 438 KAASTMEKHADSAIGN--VTGSNSVNVFLGLGLAWVVASIYWTSQGVSFEVPAGSLGFSVVVFTICAIVTLILIVIRRFVGVFGNAELGGPKTPKMISGIFMISLWLVYVLLASLQTYEYIEG 558
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|1022761811|gb|KZS07718.1| (Sodium/calcium exchanger [Daphnia magna]) HSP 1 Score: 83.1889 bits (204), Expect = 4.599e-16 Identity = 37/79 (46.84%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 +G F VQ+GSL FS+TI++I A+L + +L+ RR G ELGGP T++AS +FL+ +W+ Y+ LS+L+ YG I G Sbjct: 503 KGGEFRVQAGSLGFSITIFTITAVLSLALLVARRCSAICGRGELGGPLATRYASAIFLLLLWMTYILLSSLETYGHIEG 581
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|1005472066|ref|XP_015772900.1| (PREDICTED: sodium/calcium exchanger 3-like [Acropora digitifera]) HSP 1 Score: 83.1889 bits (204), Expect = 5.325e-16 Identity = 39/78 (50.00%), Postives = 59/78 (75.64%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 V+G+ F+V++G+L+ SV YSICAI+ I +L+ RR G AELGGP+G K+ SG FL+F+W++YV +S+L +Y +I Sbjct: 725 VKGTKFIVEAGTLSISVITYSICAIVCIVLLVVRRKSKFMGRAELGGPSGPKYFSGSFLIFLWLLYVLISSLVSYEII 802
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|954510853|gb|KRZ39055.1| (Sodium/calcium exchanger 1 [Trichinella pseudospiralis] >gi|954510854|gb|KRZ39056.1| Sodium/calcium exchanger 1 [Trichinella pseudospiralis]) HSP 1 Score: 82.8037 bits (203), Expect = 6.368e-16 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 RG FVV SG + FSVTIY++ +++ I +++ RR +P G AELGGPT KW + L+ W MY+ LS LQAYG I Sbjct: 765 RGEAFVVHSGDIGFSVTIYTVLSLICIVMMMLRRFLPVLGEAELGGPTIPKWLCSVALILFWFMYILLSALQAYGHI 841
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|871220645|ref|XP_012935788.1| (PREDICTED: sodium/calcium exchanger 2-like [Aplysia californica]) HSP 1 Score: 82.8037 bits (203), Expect = 6.464e-16 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAY 121 + G+ F V +G+LAFSVT+Y++CAI+ I +L+ RR I G AELGGP K S + VF+W YV LS+LQAY Sbjct: 539 IDGTTFEVPAGNLAFSVTLYTVCAIVTIAILMLRRSIKPLGGAELGGPKVPKTVSAIIFVFLWFFYVLLSSLQAY 613
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|954437056|gb|KRY85642.1| (Sodium/calcium exchanger 1 [Trichinella pseudospiralis]) HSP 1 Score: 82.8037 bits (203), Expect = 6.750e-16 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 RG FVV SG + FSVTIY++ +++ I +++ RR +P G AELGGPT KW + L+ W MY+ LS LQAYG I Sbjct: 765 RGEAFVVHSGDIGFSVTIYTVLSLICIVMMMLRRFLPVLGEAELGGPTIPKWLCSVALILFWFMYILLSALQAYGHI 841
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|954242537|gb|KRX37976.1| (Sodium/calcium exchanger 1 [Trichinella murrelli]) HSP 1 Score: 82.8037 bits (203), Expect = 7.511e-16 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 RG FVV SG + FSVTIY++ +++ I +++ RR +P G AELGGPT KW L+F W +Y+ LS LQAYG I Sbjct: 766 RGEAFVVHSGDVGFSVTIYTVLSLICIVMMMLRRFLPVLGEAELGGPTIPKWICSATLIFFWFLYILLSALQAYGHI 842
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|954242536|gb|KRX37975.1| (Sodium/calcium exchanger 1 [Trichinella murrelli]) HSP 1 Score: 82.8037 bits (203), Expect = 7.589e-16 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 RG FVV SG + FSVTIY++ +++ I +++ RR +P G AELGGPT KW L+F W +Y+ LS LQAYG I Sbjct: 772 RGEAFVVHSGDVGFSVTIYTVLSLICIVMMMLRRFLPVLGEAELGGPTIPKWICSATLIFFWFLYILLSALQAYGHI 848 The following BLAST results are available for this feature:
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 16
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BLAST of sodium calcium exchanger 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold634_size121673:58204..59408- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold634_size121673-processed-gene-0.11 ID=snap_masked-scaffold634_size121673-processed-gene-0.11|Name=sodium calcium exchanger 2-like|organism=Tigriopus kingsejongensis|type=gene|length=1205bp|location=Sequence derived from alignment at scaffold634_size121673:58204..59408- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sodium calcium exchanger 2-like' has the following synonyms
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