sodium calcium exchanger 2-like, snap_masked-scaffold634_size121673-processed-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Match: EMLSAG00000000114 (supercontig:LSalAtl2s:LSalAtl2s101:386569:423164:-1 gene:EMLSAG00000000114 transcript:EMLSAT00000000114 description:"maker-LSalAtl2s101-augustus-gene-4.14") HSP 1 Score: 65.855 bits (159), Expect = 7.207e-14 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 F V +G L+ SVT+Y+ICA+L + +L+ RR + FGNAELGGP K+ S FL+ +W +Y+ STLQ YG+I Sbjct: 768 FNVPAGDLSVSVTLYTICAVLAVLLLLVRRFLGIFGNAELGGPNLGKYISATFLLILWFLYILFSTLQTYGII 840
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Match: EMLSAG00000010807 (supercontig:LSalAtl2s:LSalAtl2s716:164342:182438:-1 gene:EMLSAG00000010807 transcript:EMLSAT00000010807 description:"augustus_masked-LSalAtl2s716-processed-gene-1.1") HSP 1 Score: 53.5286 bits (127), Expect = 1.144e-9 Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI-PG 126 +G VF V GSL FSVTI+ I A+L I +L RR P G ELGGP K S V WI YV +S ++AYGVI PG Sbjct: 1000 QGDVFRVPVGSLGFSVTIFCIEALLAILILXIRR-NPAVG-GELGGPKKYKTISASIFVCFWIFYVFISAMEAYGVIQPG 1077
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|127793|sp|P23685.1|NAC1_CANFA (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 64.3142 bits (155), Expect = 7.542e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 894 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKG 969
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|1346650|sp|P48767.1|NAC1_FELCA (RecName: Full=Sodium/calcium exchanger 1; AltName: Full=Na(+)/Ca(2+)-exchange protein 1; AltName: Full=Solute carrier family 8 member 1; Flags: Precursor) HSP 1 Score: 63.929 bits (154), Expect = 7.840e-12 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 49 GSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 G F V G+LAFSVT+++I A + +GVL+ RR P G ELGGP K + V +W++Y+ S+L+AY I G Sbjct: 894 GEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRR-PEIG-GELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKG 969
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|81878686|sp|Q8K596.1|NAC2_MOUSE (RecName: Full=Sodium/calcium exchanger 2; AltName: Full=Na(+)/Ca(2+)-exchange protein 2; AltName: Full=Solute carrier family 8 member 2; Flags: Precursor) HSP 1 Score: 63.929 bits (154), Expect = 9.029e-12 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 47 VRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 V+G F V++G+LAFSVT++++ A + I VL+ RR P G ELGGP G K A+ + +W +Y+ S+L+AY I G Sbjct: 843 VQGRPFEVRAGTLAFSVTLFTVFAFVCIAVLLYRRR-PQIG-GELGGPRGPKLATTALFLGLWFLYILFSSLEAYCHIRG 920
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|384955792|sp|Q6H641.2|MHX2_ORYSJ (RecName: Full=Magnesium/proton exchanger 2; AltName: Full=Mg(2+)/H(+) exchanger 2; AltName: Full=Zinc/proton exchanger 2; AltName: Full=Zn(2+)/H(+) exchanger 2) HSP 1 Score: 50.447 bits (119), Expect = 3.967e-7 Identity = 27/81 (33.33%), Postives = 50/81 (61.73%), Query Frame = 0 Query: 44 LVIVRGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 L + + +++ + L+FS+ ++ + I VL+ RR+I G AELGGP WA+ ++ + +W+++V LS+L+ GVI Sbjct: 447 LFVYKKPLYIDNAAGLSFSLLVFFATSFGCITVLVLRRVILG---AELGGPRMWAWATSVYFMILWVVFVVLSSLRISGVI 524
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|75097393|sp|O22252.3|MHX_ARATH (RecName: Full=Magnesium/proton exchanger; AltName: Full=Mg(2+)/H(+) exchanger; Short=AtMHX; AltName: Full=Zinc/proton exchanger; AltName: Full=Zn(2+)/H(+) exchanger) HSP 1 Score: 50.0618 bits (118), Expect = 5.121e-7 Identity = 28/77 (36.36%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 R +++ + L+FS+ I+ ++ I VL+ RRLI G AELGGP W + + + +W+++V LS+L+ GVI Sbjct: 466 REPLYIENAKGLSFSLLIFFATSVGCIVVLVLRRLIIG---AELGGPRLWAWLTSAYFMMLWVVFVVLSSLKVSGVI 539
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Match: gi|384950703|sp|B8K1V7.1|MHX_ARAHH (RecName: Full=Magnesium/proton exchanger; AltName: Full=Mg(2+)/H(+) exchanger; Short=AhMHX; AltName: Full=Zinc/proton exchanger; AltName: Full=Zn(2+)/H(+) exchanger) HSP 1 Score: 50.0618 bits (118), Expect = 5.863e-7 Identity = 28/77 (36.36%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 R +++ + L+FS+ I+ ++ I VL+ RRLI G AELGGP W + + + +W+++V LS+L+ GVI Sbjct: 466 REPLYIENAKGLSFSLLIFFATSVGCIVVLVLRRLIIG---AELGGPRLWAWLTSAYFMMLWVVFVVLSSLKVSGVI 539
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|313235241|emb|CBY10806.1| (unnamed protein product [Oikopleura dioica]) HSP 1 Score: 95.9005 bits (237), Expect = 1.379e-20 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 GS F V GSL FSVTI+SICA+ I L RR + FGNAELGGP KW SG+FL+ +W+ YV +STLQAY IPG Sbjct: 382 NGSTFNVPPGSLVFSVTIFSICAVCTIAFLFLRRTLSYFGNAELGGPQKQKWFSGIFLICLWLFYVLMSTLQAYEFIPG 460
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|313235239|emb|CBY10804.1| (unnamed protein product [Oikopleura dioica]) HSP 1 Score: 95.9005 bits (237), Expect = 2.077e-20 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPG 126 GS F V GSL FSVTI+SICA+ I L RR + FGNAELGGP KW SG+FL+ +W+ YV +STLQAY IPG Sbjct: 752 NGSTFNVPPGSLVFSVTIFSICAVCTIAFLFLRRTLSYFGNAELGGPQKQKWFSGIFLICLWLFYVLMSTLQAYEFIPG 830
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|195999284|ref|XP_002109510.1| (hypothetical protein TRIADDRAFT_53617 [Trichoplax adhaerens] >gi|190587634|gb|EDV27676.1| hypothetical protein TRIADDRAFT_53617 [Trichoplax adhaerens]) HSP 1 Score: 90.1225 bits (222), Expect = 2.075e-18 Identity = 40/76 (52.63%), Postives = 59/76 (77.63%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVIPGI 127 F V +G+LA SV +++ICA++ I +L+ RR+IP FG +ELGGPT +K+ SG+ LV +WI+YV +S+LQ Y +IP I Sbjct: 727 FAVPAGNLASSVILFTICAVICIALLMLRRIIPSFGGSELGGPTKSKYISGLLLVTLWIVYVVISSLQVYRIIPPI 802
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|405963446|gb|EKC29016.1| (Sodium/calcium exchanger 3 [Crassostrea gigas]) HSP 1 Score: 89.7373 bits (221), Expect = 2.977e-18 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 0 Query: 50 SVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 S+F V + +L FSV +Y+ CAIL I VL RR + FGN ELGGP K+ASG+FLVF+WI YV +S+LQAY VI Sbjct: 746 SIFEVPTDTLVFSVILYTSCAILAILVLFIRRRLAVFGNGELGGPKVPKYASGLFLVFLWIFYVIMSSLQAYKVI 820
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|443718573|gb|ELU09126.1| (hypothetical protein CAPTEDRAFT_183802 [Capitella teleta]) HSP 1 Score: 89.3521 bits (220), Expect = 3.626e-18 Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 +G F V++GSL+FSV IY++CA IG+L+ RR +P FG AELGG K G+F VF+WI+YV LS+LQAYG I Sbjct: 776 QGKRFEVKAGSLSFSVVIYAVCACSCIGLLVLRRYLPLFGKAELGGTVVPKIICGVFFVFLWILYVLLSSLQAYGHI 852
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|762155075|ref|XP_011415629.1| (PREDICTED: sodium/calcium exchanger 3 isoform X1 [Crassostrea gigas] >gi|762155077|ref|XP_011415630.1| PREDICTED: sodium/calcium exchanger 3 isoform X1 [Crassostrea gigas]) HSP 1 Score: 88.9669 bits (219), Expect = 4.138e-18 Identity = 44/77 (57.14%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 +G F V + +L FSV +Y+ CAIL I VL RR + FGN ELGGP K+ASG+FLVF+WI YV +S+LQAY VI Sbjct: 740 KGERFEVPTDTLVFSVILYTSCAILAILVLFIRRRLAVFGNGELGGPKVPKYASGLFLVFLWIFYVIMSSLQAYKVI 816
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|762155079|ref|XP_011415631.1| (PREDICTED: sodium/calcium exchanger 3 isoform X2 [Crassostrea gigas]) HSP 1 Score: 88.9669 bits (219), Expect = 4.645e-18 Identity = 44/77 (57.14%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 48 RGSVFVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 +G F V + +L FSV +Y+ CAIL I VL RR + FGN ELGGP K+ASG+FLVF+WI YV +S+LQAY VI Sbjct: 732 KGERFEVPTDTLVFSVILYTSCAILAILVLFIRRRLAVFGNGELGGPKVPKYASGLFLVFLWIFYVIMSSLQAYKVI 808
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|919101010|ref|XP_013386874.1| (sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101013|ref|XP_013386876.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101016|ref|XP_013386877.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101018|ref|XP_013386878.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101021|ref|XP_013386879.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101024|ref|XP_013386880.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101026|ref|XP_013386881.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101029|ref|XP_013386882.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina] >gi|919101032|ref|XP_013386883.1| sodium/calcium exchanger 1 isoform X1 [Lingula anatina]) HSP 1 Score: 88.9669 bits (219), Expect = 5.490e-18 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 F VQ+G+L FSV IY+ICA L IG+++ RR + F N ELGGP G K ASG+FL+F+W Y+ +S LQ VI Sbjct: 756 FQVQAGNLVFSVIIYTICATLCIGLILIRRFLKFFNNGELGGPAGPKMASGIFLIFLWFFYITMSILQTTKVI 828
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|919101037|ref|XP_013386885.1| (sodium/calcium exchanger 1 isoform X3 [Lingula anatina]) HSP 1 Score: 88.5817 bits (218), Expect = 5.981e-18 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 F VQ+G+L FSV IY+ICA L IG+++ RR + F N ELGGP G K ASG+FL+F+W Y+ +S LQ VI Sbjct: 741 FQVQAGNLVFSVIIYTICATLCIGLILIRRFLKFFNNGELGGPAGPKMASGIFLIFLWFFYITMSILQTTKVI 813
BLAST of sodium calcium exchanger 2-like vs. nr
Match: gi|919101035|ref|XP_013386884.1| (sodium/calcium exchanger 1 isoform X2 [Lingula anatina]) HSP 1 Score: 88.5817 bits (218), Expect = 5.981e-18 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 52 FVVQSGSLAFSVTIYSICAILGIGVLIGRRLIPGFGNAELGGPTGTKWASGMFLVFMWIMYVALSTLQAYGVI 124 F VQ+G+L FSV IY+ICA L IG+++ RR + F N ELGGP G K ASG+FL+F+W Y+ +S LQ VI Sbjct: 742 FQVQAGNLVFSVIIYTICATLCIGLILIRRFLKFFNNGELGGPAGPKMASGIFLIFLWFFYITMSILQTTKVI 814 The following BLAST results are available for this feature:
BLAST of sodium calcium exchanger 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of sodium calcium exchanger 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 16
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BLAST of sodium calcium exchanger 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold634_size121673:58204..59408- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold634_size121673-processed-gene-0.11 ID=snap_masked-scaffold634_size121673-processed-gene-0.11|Name=sodium calcium exchanger 2-like|organism=Tigriopus kingsejongensis|type=gene|length=1205bp|location=Sequence derived from alignment at scaffold634_size121673:58204..59408- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sodium calcium exchanger 2-like' has the following synonyms
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