l-carnitine dehydratase bile acid-inducibleprotein f, snap_masked-scaffold6409_size3893-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11") HSP 1 Score: 271.552 bits (693), Expect = 7.305e-88 Identity = 148/362 (40.88%), Postives = 219/362 (60.50%), Query Frame = 0 Query: 4 LTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDY-DVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQD-GPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYE--AKASGKGQVVDAAITDCTAHLSTMLHGLMH-NNLWQDRRGSNLLDGAAHHYNTYRCAD-NKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFE-THDGCVQPAPAPRFSRTPGAIRRSPPTP-GQHSDEL 357 L G+RV+E AGL PF +M+LAD GA V+R++ V Y DV RGK+S++++LK+ +G L+ ++D+ +E FRPGVME+L L P+V + NP+L+Y R++G+GQ+ PL AGHDINYI+LSGAL IG + KP P+N++GDFGGG L AFG++AA+YE +SGKGQ++D IT ++LST L+ + +LW + RG N+LD AH Y Y + K+IS+G +EP+FY+ L ++ L E+ + + L D + F + + W ++ D C PVLS+ E S + + + F ++ G P PAP+ SRTP I P G+HS E+ Sbjct: 3 LKGVRVVEMAGLAXAPFTSMILADFGASVIRVDNHPD----AVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYPQFGGDTK--KLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSS--NELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEI 356
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Match: gi|122476608|sp|Q217M3.1|FCTA_RHOPB (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 120.939 bits (302), Expect = 5.323e-29 Identity = 108/404 (26.73%), Postives = 180/404 (44.55%), Query Frame = 0 Query: 4 LTGLRVIEFAGLGPGPFAAMLLADMGADVVRLERE--------QGDNLLGVD---YDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTM----LHGLMHNNLWQ--------------DRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQR-------MGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQ---------LLEGSDCCFAPVLSLREASEHPH-----NVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDEL 357 L G+R+++F + GP LLA GADV+++ER Q ++ VD + +LN KRS+ +D K P+G + AL+ D+L+E F PGV++R+G E NP ++ + G+G GP + ++ GA T G DG P + +GD G G L+LA G++ A+Y+ +G+GQ V AA+ D +LS + L H L + R G++ G +C W + +P Y F+ + + +P+++ A+ A+ L+++FA+ E W +L D P+LS++E +E V T + + S +P + RS P G+H+DE+ Sbjct: 5 LNGVRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDITRGQLQDIPNVDSLYFTMLNHNKRSITLDTKNPKGKEVLTALIKSCDVLVENFGPGVLDRMGFSWEKIQSLNPKMIVASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGFRDGLPLVTGAQIGDSGTG-LHLALGIVTALYQRTVTGRGQKVTAAMQDGVLNLSRVKLRDQQRLAHGPLKEYSQFGEGIPFGDAVPRAGND--SGGGQPGRILKC--KGWET----DPNAYIYFITQAPVWEKICDVIGEPDWKTHPDYAKPAARLKHLNDIFAR--IEQWTMTKTKFEAMDILNKDDIPCGPILSMKELAEDQSLRATGTVVEVDHPTRGKYLSVGNPIKMSDSPTEVMRS-PLLGEHTDEI 395
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Match: gi|39931310|sp|O87838.1|FCTA_STRCO (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 119.398 bits (298), Expect = 1.495e-28 Identity = 109/397 (27.46%), Postives = 186/397 (46.85%), Query Frame = 0 Query: 4 LTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGD-------NLLGVD---YDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHL--------STMLHGLMHNNLWQD-----RRGSNLLDGAAHHYNTYRCA-----DNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQ-QPAEHWR---------QLLEGSDCCFAPVLSLREASEHPHNVARKVFET----HDGCVQPAPAP-RFSRTPGAIRRSPPTPGQHSDEL 357 L G+RV++ + GP A LLA +GADVV+LE GD +L VD + +LN KRS+ ++ K+ G + L+ +D+++E F PG ++R+G + + NP +VY + G+G+ GP +++ A+ G++ T G DG P +GD G G +++ G++AA+Y+ + +G+GQ V+ A+ +L + HG + +D R N G + +CA D ++ + P+ + +E + R LA+DPE WA+ RL +L Q E W + L + P+LS +E E VA ++ T G +P + S +P + S P G+H++E+ Sbjct: 6 LEGIRVLDMTHVQSGPSATQLLAWLGADVVKLEAPHGDITRGQLRDLPDVDSLYFTMLNCNKRSITLNTKSERGKEILTELIRRSDVMVENFGPGAVDRMGFTWDRVKEINPRIVYASIKGFGE-GPYTAFKAYEVVAQAMGGSMSTTGFEDGPPLATGAQIGDSGTG-VHVVAGILAALYQREHTGRGQRVNVAMQHAVLNLCRVKLRDQQRLSHGPLAEYPNEDFGDEVPRSGNASGGGQPGW-AVKCAPGGPNDYVYVIVQPVGWQPLSELIGRPELAEDPE---------WATPRARLPKLNKMFQLIEEWSSTLPKWEVLERLNAHNIPCGPILSTKEIIEDDSLVANEMVVTVPHPERGEFVTVGSPLKLSDSPVEVTSS-PLLGEHNEEV 389
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Match: gi|57012792|sp|Q6N8F8.2|FCTA_RHOPA (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 119.398 bits (298), Expect = 2.178e-28 Identity = 110/407 (27.03%), Postives = 182/407 (44.72%), Query Frame = 0 Query: 4 LTGLRVIEFAGLGPGPFAAMLLADMGADVVRLERE--------QGDNLLGVD---YDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTM----LHGLMHNNLWQ--------------DRRGSNLLDGAAHHYNTYRCAD-----NKWISIGPLEPKF--YTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWR---------QLLEGSDCCFAPVLSLREASEHPH-----NVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 L G+RV++F + GP LLA GADV+++ER Q ++ VD + +LN KRS+ +D K P+G + AL+ D+L+E F PGV++R+G E + NP ++ + G+G GP + ++ GA T G +G P + +GD G G L+LA G++ A+Y+ +G+GQ V AA+ D +L + L H L + R G++ G +C N +I + P + + + G P++ PAR + RL+E+FA+ E W ++L D P+LS++E +E + T + + S +P ++RS P G+H+DE+ D Sbjct: 5 LDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTG-LHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPRAGND--SGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKTHPDY--ATPPARLS----RLNEIFAR--IEQWTMTKTKFEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDHPTRGKYLSVGNPIKLSDSPTEVKRS-PLLGEHTDEILRD 398
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Match: gi|81542073|sp|Q9I701.1|BAUB_PSEAE (RecName: Full=Beta-alanine degradation protein BauB) HSP 1 Score: 109.768 bits (273), Expect = 3.566e-28 Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0 Query: 356 ELETDRVLVTEWRFAPGAETGWHRHGMDYVVVPQSTGQLLLETPEGEKRADLTAGVAYARAEGTEHNVVNDNDTEFVFVEVELK 439 +++ V+VTEWRFAPGAETG HRHG DYVVVP + G LLLETPEG++ A L AG AY R G EHNV+N + E VFVE E+K Sbjct: 12 QVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK 95
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Match: gi|226700867|sp|B3QBS6.1|FCTA_RHOPT (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 118.242 bits (295), Expect = 4.858e-28 Identity = 110/407 (27.03%), Postives = 182/407 (44.72%), Query Frame = 0 Query: 4 LTGLRVIEFAGLGPGPFAAMLLADMGADVVRLERE--------QGDNLLGVD---YDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTM----LHGLMHNNLWQ--------------DRRGSNLLDGAAHHYNTYRCAD-----NKWISIGPLEPKF--YTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWR---------QLLEGSDCCFAPVLSLREASEHPH-----NVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 L G+RV++F + GP LLA GADV+++ER Q ++ VD + +LN KRS+ +D K P+G + AL+ D+L+E F PGV++R+G E + NP ++ + G+G GP + ++ GA T G +G P + +GD G G L+LA G++ A+Y+ +G+GQ V AA+ D +L + L H L + R G++ G +C N +I + P + + + G P++ PAR + RL+E+FA+ E W ++L D P+LS++E +E + T + + S +P ++RS P G+H+DE+ D Sbjct: 5 LDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTG-LHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPRAGND--SGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDY--ATPPARLS----RLNEIFAR--IEQWTMTKTKFEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDHPTRGKYLSVGNPIKLSDSPTEVKRS-PLLGEHTDEILRD 398
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1222215597|ref|WP_090270218.1| (CoA transferase [Litorimicrobium taeanense] >gi|1103310055|emb|SEQ59434.1| alpha-methylacyl-CoA racemase [Litorimicrobium taeanense]) HSP 1 Score: 468.389 bits (1204), Expect = 3.165e-161 Identity = 220/360 (61.11%), Postives = 276/360 (76.67%), Query Frame = 0 Query: 1 MGPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 MGPL G+++IE AG+GPGPF AMLLAD+GADVVRLER Q YDVL+RG+RSV+VDLK+ EG+DTAL L++ AD LIEGFRPGVMERLGLGPEVC + NPALV+GRMTGWGQ GPLA +AGHDINYI+L+GAL IG A+ P P+NL+GDFGGGS+YLA G+++A+ EAK+SG+GQVVDAA+TD AHL ++++ + + W D R SNLLDG+A Y T++CAD W+S+GPLEP+FY FL+++G +D P A WA L ELF +P + W +LLEG+D CFAPVL++ EA EHPHN AR+ F T VQPAPAPRFSRTPG+I R PP G+H+DE+ +D Sbjct: 1 MGPLNGIKIIEMAGIGPGPFCAMLLADLGADVVRLERPQNGASKESAYDVLSRGRRSVSVDLKSKEGVDTALQLISKADALIEGFRPGVMERLGLGPEVCLELNPALVFGRMTGWGQFGPLANAAGHDINYISLTGALAAIGTAESGPVAPLNLVGDFGGGSMYLAIGILSAILEAKSSGQGQVVDAAMTDGAAHLMSLMYSMKNAGRWSDERASNLLDGSAPFYGTFKCADESWVSLGPLEPQFYKLFLEKVGFSDHPTMLNQMDRASWAEKKQLLVELFLTKPRQDWCELLEGTDVCFAPVLTMAEAPEHPHNKARETFVTVHDVVQPAPAPRFSRTPGSIGRRPPNAGEHNDEVMSD 360
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1200313573|gb|OUU34746.1| (carnitine dehydratase [Proteobacteria bacterium TMED51] >gi|1200337527|gb|OUU57862.1| carnitine dehydratase [Candidatus Endolissoclinum sp. TMED55]) HSP 1 Score: 447.588 bits (1150), Expect = 5.120e-153 Identity = 217/357 (60.78%), Postives = 266/357 (74.51%), Query Frame = 0 Query: 1 MGPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDEL 357 MGPL G R++E AGLGP PF AMLL+DMGADVVR++RE G N L + DVLNRG+RSVA++LKTPEGI TALAL+A AD +IEG+RPGVMERLGLGPE C NP LVYGRMTGWGQ GPLA +AGHDINYIAL+G L IG D T P+NL+GDFGGG+LYLAFG++ A+ EA+ SG+GQVVDAA+ D AHL TM++GL W D+R NLLDG AH Y + CAD KWI+IG +EP+FY L +G+ D E S W + ++L ++F ++P +W +L+EG+D CFAPVLS+ +A EHPHN R VF G QPAPAPRFSRTPG IRR PP PG+H++E+ Sbjct: 1 MGPLNGYRIVEMAGLGPAPFCAMLLSDMGADVVRIDREGGSNPLDLKIDVLNRGRRSVALNLKTPEGIATALALIARADAVIEGYRPGVMERLGLGPEECLAKNPCLVYGRMTGWGQAGPLAHAAGHDINYIALTGVLDAIG-TDESVTPPLNLVGDFGGGALYLAFGVVCALLEARGSGEGQVVDAAMVDGAAHLMTMMYGLTQQGKWTDKRQDNLLDGGAHFYGAFECADGKWIAIGSIEPQFYRLLLDTLGIDPDAEGVS-QSKENWQRMREQLRQIFLREPQSYWCELMEGTDICFAPVLSMTDAPEHPHNKHRSVFVEDFGITQPAPAPRFSRTPGRIRREPPQPGEHTEEV 355
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1200334498|gb|OUU54944.1| (carnitine dehydratase [Proteobacteria bacterium TMED61]) HSP 1 Score: 434.106 bits (1115), Expect = 1.069e-147 Identity = 208/360 (57.78%), Postives = 260/360 (72.22%), Query Frame = 0 Query: 1 MGPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 MGPL G R++E AGL P PF AMLL+DMGADVVR++RE G N LG+ DVLNRG+RSVA++LK+ EG+ T L L+A AD +IEGFRPGVMERLGLGP+ C NP LVYGRMTGWGQDGPLA++AGHDINYIA++G L IG D T P+NL+GDFGGG+LYLAFG++ A+ E + SGKGQVVDAA+ D AHL TM++GL+ W D+R NLLDG AH Y T+ CAD KWI+IG +EP+FY L +G+ D G + W + RL ++F ++P HW + +EG+D CFAPVL++ +A HPHN AR F G QP PAPRF RT G I+R PP PG+H+ E+ D Sbjct: 3 MGPLHGYRIVEMAGLXPAPFXAMLLSDMGADVVRIDREGGTNPLGLKVDVLNRGRRSVALNLKSSEGVTTCLELIARADAVIEGFRPGVMERLGLGPDECLAKNPRLVYGRMTGWGQDGPLAQAAGHDINYIAIAGVLDAIG-TDKAVTPPLNLVGDFGGGALYLAFGVVXALLEVRGSGKGQVVDAAMVDGAAHLMTMMYGLLQQGQWTDQRQDNLLDGGAHFYGTFECADGKWIAIGSIEPQFYQLLLDTLGI-DAQSKGVGQAKKDWQKMRQRLKQIFLREPQSHWCEXMEGTDICFAPVLTMADAPAHPHNEARGTFVNAFGITQPGPAPRFXRTXGGIQRPPPIPGEHTAEVXKD 360
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|739707179|ref|WP_037561214.1| (CoA transferase [Alkalispirochaeta odontotermitis] >gi|699058243|gb|KGM43891.1| carnitine dehydratase [Alkalispirochaeta odontotermitis]) HSP 1 Score: 430.639 bits (1106), Expect = 3.443e-146 Identity = 200/360 (55.56%), Postives = 261/360 (72.50%), Query Frame = 0 Query: 1 MGPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 MGPL G+++IEF G+GPGPF AM+L+DMGADV+R+ER+ G +L YDV+ R +RSV++DL+ PEG L +++ D L EGFRPGVME+LGLGPEVC + NPALVYGRMTGWGQ+GPLA +AGHDINYI+L GAL T G KP P+N++GDFGGG + LAFG++ A+YEA+ SG+GQVVDAA+ D +A L M +GL +W D RG NLLDG AH Y+TY AD K+IS+G +EP+FY LQ G+ DP+F + P +W +L ++++++F + W Q++EG+D CFAPVLSL EA HPHN RK F DG QPAP PRFSRTP ++ PP PG+H+ + D Sbjct: 1 MGPLEGVKIIEFGGIGPGPFCAMMLSDMGADVIRIERKGGLSLTEPKYDVMMRNRRSVSIDLRKPEGAAGVLEMVSQVDALQEGFRPGVMEKLGLGPEVCLEKNPALVYGRMTGWGQEGPLARAAGHDINYISLCGALHTFGPKGQKPVFPLNMVGDFGGGGMLLAFGMICALYEAQKSGRGQVVDAAMVDGSAALMAMFYGLRAAGIWADERGVNLLDGGAHFYDTYETADGKYISVGAIEPQFYQLLLQHAGI-KDPDFGDQLDPKKWPALKEKITDIFKTKTRAEWCQIMEGTDICFAPVLSLDEAPNHPHNRERKTFVEVDGVRQPAPTPRFSRTPPELKSPPPQPGEHTKAVLGD 359
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1270411657|gb|PHS04863.1| (carnitine dehydratase [Acidithiobacillus sp.]) HSP 1 Score: 429.483 bits (1103), Expect = 4.089e-146 Identity = 199/349 (57.02%), Postives = 259/349 (74.21%), Query Frame = 0 Query: 12 FAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 AG+GPGPF AMLLADMGADVVR++R+ DY +LNRG+RS+A+DLK P+ ++T L L+ AD L EGFRPGVMERLGLGP+VC+ NPA+VYGRMTGWGQ GPL+ +AGHDINYIAL+GAL IG D P P+NL+GDFGGG++YLAFGLM ++E ++SG+GQ+VD A+TD AHL M++ L H+ +W D RGSN LDG AH Y T+ CAD +W++IG +EP+FY L++ G+ DD F+ A W +L + L+++F + + W L+EG+D CFAPVLS+ EA HPHN+AR+ F +DG VQPAPAPRFSRT + RSPP PG+H+ E+ D Sbjct: 1 MAGIGPGPFCAMLLADMGADVVRVDRKSPTAGFDKDYQILNRGRRSIALDLKDPDDLETVLRLIEKADALXEGFRPGVMERLGLGPDVCFMRNPAIVYGRMTGWGQAGPLSHAAGHDINYIALTGALHAIGNVDQGPVPPLNLVGDFGGGAMYLAFGLMCGLHEVQSSGQGQIVDVAMTDGAAHLMAMMYSLKHSQMWSDVRGSNFLDGGAHFYGTFECADGEWVAIGSIEPQFYALLLEKAGV-DDERFKRQMDAANWPALKNALAQIFRSKTRDQWCALMEGTDVCFAPVLSMTEAPGHPHNMARQTFVEYDGVVQPAPAPRFSRTEPELSRSPPAPGEHTAEILKD 348
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|765002588|ref|WP_044568784.1| (CoA transferase [Streptomyces iranensis] >gi|642952086|emb|CDR05387.1| L-carnitine dehydratase/bile acid-inducibleprotein F [Streptomyces iranensis]) HSP 1 Score: 427.172 bits (1097), Expect = 8.769e-145 Identity = 211/358 (58.94%), Postives = 259/358 (72.35%), Query Frame = 0 Query: 2 GPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVD--YDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDEL 357 GPL G+RV+E AG+GPGPFAAM+LADMGADVVR++R +G L +D YD+ NR KRSV +DLK G L L+ ADILIEG+RPGV E+LGLGP+ C NP LVYGRMTGWGQ+GPLA +AGHDI YIA++GAL IGAADG P PVNLLGD+ GGSLYLA GL+AA++ A+A G GQVVDAAI D TAHL+ + HG+M W+D+RG+NLLDG Y TY AD ++++GPLE KFYTEF++ +G+AD R+ WA+L D +++ F ++ E W + GSD C APVLSLREA HPH AR F H G QPAPAPRFS TPGA+RR P PG +DE+ Sbjct: 11 GPLAGVRVVELAGIGPGPFAAMVLADMGADVVRVDRPEGAGGLRIDPDYDLANRNKRSVLIDLKADGGTAVVLDLVERADILIEGYRPGVAEKLGLGPDDCLARNPKLVYGRMTGWGQEGPLARTAGHDIGYIAVTGALSMIGAADGPPVAPVNLLGDYAGGSLYLAIGLLAALHHARAGGPGQVVDAAIVDGTAHLTAVTHGMMAAGGWRDQRGTNLLDGGCPFYGTYETADGGYMAVGPLERKFYTEFIELLGIADKAPARDDFD--SWAALSDAIADRFKERTREEWTAVFGGSDACVAPVLSLREAPSHPHLAARSTFLDHGGITQPAPAPRFSATPGAVRRGPARPGADTDEV 366
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1088272735|gb|OHB28163.1| (carnitine dehydratase [Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_69_31]) HSP 1 Score: 426.402 bits (1095), Expect = 1.435e-144 Identity = 204/372 (54.84%), Postives = 273/372 (73.39%), Query Frame = 0 Query: 2 GPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLERE-QGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETDRVLVTEWRFAPG 372 GPLTGL+++EFAG+GPGPF MLL+D+GADVVR++R+ QG G D+ +RG+RSVA+DLK PE ++ L L+ AD +IEGFRPGVMERLGLGPEV + NP LV+GRMTGWGQ GP A++AGHD+NYIA++GAL IG D KP P+NL+GDFGGG+LYLAFGL+A V +A+ +G GQV+D A++D A L M +G +W+++R SN+LDG AH Y+TY+C D KW+SIG +EP+FY L++ G+ DDPEF++ H + W L ++L+++ AQ+ + W +++ G+D CFAPVL L EA +HPHN AR+ F DG VQPAPAPRFS TPG I+ PP G H DR +++W F+ G Sbjct: 4 GPLTGLKIVEFAGIGPGPFCGMLLSDLGADVVRIDRKGQGR---GAPSDITSRGRRSVALDLKKPEAVEACLKLMDAADAIIEGFRPGVMERLGLGPEVALKRNPKLVFGRMTGWGQTGPYAQAAGHDMNYIAITGALHAIG-TDDKPVPPLNLVGDFGGGALYLAFGLLAGVIQARETGNGQVIDCAMSDGAASLMAMFYGFKAAGMWKEQRRSNMLDGGAHFYDTYQCRDGKWVSIGSIEPQFYALLLEKTGI-DDPEFQKQHDRSAWPGLREKLADVIAQKTRDEWTEIMGGTDVCFAPVLDLDEAPKHPHNAARETFVNLDGVVQPAPAPRFSATPGKIQGPPPAIGAH------DREALSDWGFSDG 364
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1223609333|ref|WP_091645300.1| (CoA transferase [Aquisalimonas asiatica] >gi|1094572339|emb|SEP06730.1| alpha-methylacyl-CoA racemase [Aquisalimonas asiatica]) HSP 1 Score: 426.402 bits (1095), Expect = 1.515e-144 Identity = 210/382 (54.97%), Postives = 270/382 (70.68%), Query Frame = 0 Query: 1 MGPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETDRVLVTEWRFAPGAETGWHRHGM 382 MGPL G+RV+E AG+GPGPF M+LADMGADV+R++R+ N L VD V RG+RSVA+DLK P G++T L L+ ADILIEG+RPGVMERLGLGPE C + NP LVYGRMTGWGQDGPLA++AGHD+NYIAL+GAL IG +P P+NL+GD+GGG++ LAFG++ A EA+ SG+GQVVD+A+TD TA L ++ HGL +W + RG+NLLDG A Y+TY CAD + ISIG LEP+FY E L+R+GL DDP+ E + W ++ R +FA + ++ W +LEG+D CFAPVL + EA EHPH+VAR F HDG VQ APAPRFSRT + PG+ +D +T+W PG + G+ Sbjct: 1 MGPLKGVRVVEMAGIGPGPFCGMMLADMGADVLRIDRKTA-NALPVDDPVTARGRRSVALDLKQPAGVETVLQLVEQADILIEGYRPGVMERLGLGPETCLERNPRLVYGRMTGWGQDGPLAQAAGHDLNYIALAGALHGIGRPGERPVPPLNLVGDYGGGAMMLAFGVVCATLEARQSGQGQVVDSAMTDGTALLLSLFHGLRAQGVWSNERGTNLLDGGAPFYDTYTCADGRHISIGALEPQFYRELLERIGLGDDPDCAEQMNRKAWPAMRARFEAVFATRTSQEWCDILEGTDVCFAPVLDMDEAPEHPHHVARGTFVQHDGMVQAAPAPRFSRTRAELTTGARKPGEDTD------TALTDWGIDPGVVSELREQGV 375
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|1274492628|ref|WP_099622278.1| (CoA transferase [Caulobacter mirabilis] >gi|1273867025|gb|ATQ43027.1| carnitine dehydratase [Caulobacter mirabilis]) HSP 1 Score: 423.705 bits (1088), Expect = 1.445e-143 Identity = 206/369 (55.83%), Postives = 269/369 (72.90%), Query Frame = 0 Query: 2 GPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNLLGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETDRVLVTEWRFA 370 GPL+GL+++EFAG+GPGPF MLL+D+GADVVR++R+ G DV +RG+RSVA+DLK+P+ I+ L LL AD LIEGFRPGVMERLGLGP+V + NP L YGRMTGWGQ GP A++AGHD+NYIA++GAL IG D KP P+NL+GDFGGG+LYLAFGL+AAV A+ +G+GQV+D A++D A L M +G +W+D R +N+LDG AH Y+TY+CAD KWISIG +EP+FY L++ G+ DPEF+ A W SL +L+++ Q+ W +++ +D CFAPVL+L EA +HPHNV R+ F T +G VQPAPAPRFS TPGAI+ PP G H+DE +TEW F+ Sbjct: 4 GPLSGLKIVEFAGIGPGPFCGMLLSDLGADVVRIDRKGGGR--SSPADVTSRGRRSVALDLKSPDAIEAVLKLLETADGLIEGFRPGVMERLGLGPDVVLKRNPKLAYGRMTGWGQFGPYAKAAGHDMNYIAITGALHAIGT-DEKPVPPLNLVGDFGGGALYLAFGLLAAVISARQTGQGQVIDCAMSDGAASLMAMFYGFKGAGIWKDERRANMLDGGAHFYDTYQCADGKWISIGSIEPQFYALLLEKTGIT-DPEFQNQMDRASWPSLRAKLADVLKQKTQAEWCAIMDATDICFAPVLTLEEAPKHPHNVERETFVTLEGVVQPAPAPRFSVTPGAIQGPPPKIGAHNDE------ALTEWGFS 362
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Match: gi|640930449|gb|KDN73045.1| (carnitine dehydratase [Streptomyces olindensis]) HSP 1 Score: 423.705 bits (1088), Expect = 2.005e-143 Identity = 210/360 (58.33%), Postives = 257/360 (71.39%), Query Frame = 0 Query: 2 GPLTGLRVIEFAGLGPGPFAAMLLADMGADVVRLEREQGDNL-LGVDYDVLNRGKRSVAVDLKTPEGIDTALALLAHADILIEGFRPGVMERLGLGPEVCWQANPALVYGRMTGWGQDGPLAESAGHDINYIALSGALGTIGAADGKPTMPVNLLGDFGGGSLYLAFGLMAAVYEAKASGKGQVVDAAITDCTAHLSTMLHGLMHNNLWQDRRGSNLLDGAAHHYNTYRCADNKWISIGPLEPKFYTEFLQRMGLADDPEFREGHSPARWASLGDRLSELFAQQPAEHWRQLLEGSDCCFAPVLSLREASEHPHNVARKVFETHDGCVQPAPAPRFSRTPGAIRRSPPTPGQHSDELETD 360 GPLTG+RV+E AG+GPGPFAAMLLAD+GADVVR++R G L + YDV NR KRSV VDLK+P+G D L L AHADILIEG+RPGV ERLG+GPE C NP LVYGRMTGWGQDGPLA AGHDI Y+A +G LG IG D P +P NLLGD+ GGSLYL G++AA++ A+A+G GQVVDAAI D TAHL+ M+HG++ WQDRRG+NLLDG +Y TY AD K++++G LEP+FY EFL +G+ D R+ ARW L ++++ F + E W + +GSD C APVLSLREA HPH AR F HDG QPAPAPRFS TP ++R P PG + ++ D Sbjct: 10 GPLTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLAIDPAYDVTNRNKRSVVVDLKSPDGPDQVLGLAAHADILIEGYRPGVAERLGVGPEHCRARNPRLVYGRMTGWGQDGPLAHRAGHDIAYLAPTGVLGMIGRPDEPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTGQVVDAAIVDGTAHLAAMIHGMLAAGGWQDRRGANLLDGGCPYYGTYETADGKYMAVGALEPRFYAEFLALLGVEDQAAARK--DIARWGELREQVAARFKSRTREEWTAVFDGSDACVAPVLSLREAPHHPHLAARGTFTDHDGLTQPAPAPRFSATPTSVRSGPARPGADTADVARD 367 The following BLAST results are available for this feature:
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of l-carnitine dehydratase bile acid-inducibleprotein f vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold6409_size3893:27..1416- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold6409_size3893-processed-gene-0.1 ID=snap_masked-scaffold6409_size3893-processed-gene-0.1|Name=l-carnitine dehydratase bile acid-inducibleprotein f|organism=Tigriopus kingsejongensis|type=gene|length=1390bp|location=Sequence derived from alignment at scaffold6409_size3893:27..1416- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'l-carnitine dehydratase bile acid-inducibleprotein f' has the following synonyms
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