RhoA, snap_masked-scaffold640_size121076-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of RhoA vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7") HSP 1 Score: 76.6406 bits (187), Expect = 5.506e-17 Identity = 53/171 (30.99%), Postives = 89/171 (52.05%), Query Frame = 0 Query: 89 IRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVF 256 +RK KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAGQE + L P D+ V ++ + + +S KW +V+ +V I+LVGNK DL ++ V E+G A+++N ++E SAK+ V+ +F Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQ-TSKWIDDVRTERGSDVIIMLVGNKTDLS------------EKRQVPTEDGERKAKELNVM-FIETSAKAGYNVKLLF 167
BLAST of RhoA vs. L. salmonis genes
Match: EMLSAG00000004714 (supercontig:LSalAtl2s:LSalAtl2s248:219542:223971:-1 gene:EMLSAG00000004714 transcript:EMLSAT00000004714 description:"maker-LSalAtl2s248-augustus-gene-2.18") HSP 1 Score: 74.3294 bits (181), Expect = 1.445e-16 Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0 Query: 92 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 270 ++V +GDG GK+ L + + + F + + PT+ + Y +D + L + DTAGQE++ +R + ++C+SI S E K V+ +VP+ILV NK DL + GK K V PEEG +A+K ++E SA + + +VF T R +++K K Sbjct: 11 RIVXLGDGGVGKSALTLQYVQHNFIDYHDPTIEDAYQQRTVIDNEPCVLDILDTAGQEEFTTMREQYMRGGEGFVLCYSISDRHSYLEAQEYRKLILRVRD-EDSVPMILVANKVDL-------EVYGKRK---VSPEEGNALADKFGC-PFIETSAAQRRRIDDVFHTLVR---EIRKNK 176
BLAST of RhoA vs. L. salmonis genes
Match: EMLSAG00000005111 (supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1 gene:EMLSAG00000005111 transcript:EMLSAT00000005111 description:"augustus_masked-LSalAtl2s26-processed-gene-8.9") HSP 1 Score: 76.2554 bits (186), Expect = 1.517e-16 Identity = 55/213 (25.82%), Postives = 100/213 (46.95%), Query Frame = 0 Query: 92 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY--------------------------------DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN--VPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 269 KL+I+GD GK+ LL+ F+ + F Y+ T+ ++ + +EV+G++V+L +WDTAGQE + + Y T +++ + + + +S N+ ++W E+ C + V LVGNK ND +T K++ V E+ + ++++ E SAK V E+F++ T L+ KK+ Sbjct: 11 KLLIIGDSGVGKSSLLLRFADNSFTGNYITTIGVDFKIRTLEVNGERVKLQIWDTAGQERFRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITATYYRGTHGVIVVYDVSNGESFANV-KRWLHEIDQNCSSEVVSRXLVGNK----NDGDTAKKV-------VLTEDAKRFSDQM-GIRLFETSAKENFNVEEMFKSLTELVLKSKKE 210
BLAST of RhoA vs. L. salmonis genes
Match: EMLSAG00000011581 (supercontig:LSalAtl2s:LSalAtl2s800:196338:197338:-1 gene:EMLSAG00000011581 transcript:EMLSAT00000011581 description:"maker-LSalAtl2s800-augustus-gene-2.36") HSP 1 Score: 74.7146 bits (182), Expect = 2.102e-16 Identity = 49/179 (27.37%), Postives = 82/179 (45.81%), Query Frame = 0 Query: 92 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAAL 264 K++I+GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAGQE + L Y D ++C+ + ++ +++ E W E + P N P +++GNK DL N V + + N Y E SAK V + F T + AL Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDANTFQSL-ESWRDEFLIQASPSDLDNFPFVVLGNKVDLEN-------------RAVSSKRAQQWCHSKNEVPYFETSAKEAINVEQAFLTIAKNAL 174
BLAST of RhoA vs. L. salmonis genes
Match: EMLSAG00000004744 (supercontig:LSalAtl2s:LSalAtl2s24:1428257:1431103:1 gene:EMLSAG00000004744 transcript:EMLSAT00000004744 description:"maker-LSalAtl2s24-augustus-gene-13.27") HSP 1 Score: 72.4034 bits (176), Expect = 1.259e-15 Identity = 52/167 (31.14%), Postives = 74/167 (44.31%), Query Frame = 0 Query: 92 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVF 256 KLV+VGD GK CLL ++ T+ F I ++L +WDT GQE Y + Y + ++ F I +P S N+ + W E+ F +P ILVGNK DL ++ V EE + A K AY+E SA V++ F Sbjct: 40 KLVLVGDSGVGKXCLLEKLIDSSSKNTFISTIGFVIRTHVIVHQQNHLKLQVWDTGGQERYRPVLAXCYRNASGAIIVFDITNPTSFLNLSQ-WLDEISEFSEEPLPKILVGNKADLS------------ERRRVSKEEAQNFANKW-KMAYIETSALESTNVKQAF 192
BLAST of RhoA vs. SwissProt
Match: gi|51701843|sp|Q9HF54.1|RHO1_ASHGO (RecName: Full=GTP-binding protein RHO1; Flags: Precursor) HSP 1 Score: 269.24 bits (687), Expect = 2.789e-90 Identity = 124/181 (68.51%), Postives = 153/181 (84.53%), Query Frame = 0 Query: 88 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKK 268 +IR+KLVIVGDGACGKTCLLIVF+K +FP+VYVPTVF+NYVAD+EVDG++VELALWDTAGQEDYDRLRPLSYPD++V+L+C+SID PDSLEN+ EKW EV +FC VPIILVG K DLRNDP I++L + Q+PV + + +A++I A Y+ECSAK+ GVREVFE ATRA+L K+ Sbjct: 9 SIRRKLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFEAATRASLMGKQ 189
BLAST of RhoA vs. SwissProt
Match: gi|1350595|sp|Q10133.1|RHO2_SCHPO (RecName: Full=GTP-binding protein rho2; Flags: Precursor) HSP 1 Score: 230.72 bits (587), Expect = 4.188e-75 Identity = 110/193 (56.99%), Postives = 140/193 (72.54%), Query Frame = 0 Query: 89 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK-----KKKKKPCVL 276 IR+KLV+VGDGACGKT LL VF+ FP YVPTVFENYV+D VDGK V+LALWDTAGQE+Y+RLRP+SY +IL+ F+IDSPDSLEN+ KW E+ CPNVP ILVG K DLR+DP I+E+ + Q VK ++ +A++I A Y+ECS+ + +GV +VFE ATRAAL V+ K K C++ Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKCCII 199
BLAST of RhoA vs. SwissProt
Match: gi|51701705|sp|Q6RUV5.1|RAC1_RAT (RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702785|sp|P62998.1|RAC1_BOVIN RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702786|sp|P62999.1|RAC1_CANFA RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=Rac2; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702787|sp|P63000.1|RAC1_HUMAN RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=Cell migration-inducing gene 5 protein; AltName: Full=Ras-like protein TC25; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702788|sp|P63001.1|RAC1_MOUSE RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor) HSP 1 Score: 226.868 bits (577), Expect = 8.371e-74 Identity = 114/195 (58.46%), Postives = 143/195 (73.33%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAAL---QVKKKKKKPCVLF 277 M AI K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K DLR+D +TI++L + K P+ +G MA++I A YLECSA ++ G++ VF+ A RA L VKK+K+K C+L Sbjct: 1 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRK-CLLL 192
BLAST of RhoA vs. SwissProt
Match: gi|51338611|sp|P84095.1|RHOG_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoG; Flags: Precursor >gi|51338612|sp|P84096.1|RHOG_MOUSE RecName: Full=Rho-related GTP-binding protein RhoG; AltName: Full=Sid 10750; Flags: Precursor >gi|51338613|sp|P84097.1|RHOG_CRICR RecName: Full=Rho-related GTP-binding protein RhoG; Flags: Precursor) HSP 1 Score: 226.483 bits (576), Expect = 1.428e-73 Identity = 104/187 (55.61%), Postives = 137/187 (73.26%), Query Frame = 0 Query: 92 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKKPCVLF 277 K V+VGDGA GKTCLLI ++ + FP+ Y+PTVF+NY A VDG+ V L LWDTAGQE+YDRLR LSYP T+V ++CFSI SP S EN+ KW PEV H CP+VPI+LVG KKDLR P+T++ L + Q P+ P++G+ +A++I+A YLECSA ++GV+EVF A RA L K+ + C+L Sbjct: 5 KCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAEAVRAVLNPTPIKRGRSCILL 191
BLAST of RhoA vs. SwissProt
Match: gi|21431819|sp|Q03206.2|RAC1_CAEEL (RecName: Full=Ras-related protein ced-10; AltName: Full=CErac1; AltName: Full=Cell death protein 10; AltName: Full=Cell-corpse engulfment protein ced-10; AltName: Full=Ras-related protein rac-1; Flags: Precursor) HSP 1 Score: 224.172 bits (570), Expect = 9.004e-73 Identity = 104/187 (55.61%), Postives = 137/187 (73.26%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKK 272 M AI K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L LWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DLR D +T++ L + + +PV +G MA++I A YLECSA ++ G+++VF+ A RA L ++ KK Sbjct: 1 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQRAKK 185
BLAST of RhoA vs. nr
Match: gi|45332272|gb|AAS58058.1| (RhoA [Tigriopus japonicus]) HSP 1 Score: 394.43 bits (1012), Expect = 1.901e-137 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 192
BLAST of RhoA vs. nr
Match: gi|225712608|gb|ACO12150.1| (Ras-like GTP-binding protein Rho1 precursor [Lepeophtheirus salmonis] >gi|290462237|gb|ADD24166.1| Ras-like GTP-binding protein Rho1 [Lepeophtheirus salmonis]) HSP 1 Score: 392.119 bits (1006), Expect = 1.666e-136 Identity = 190/192 (98.96%), Postives = 192/192 (100.00%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPE+GRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK+PCVLF Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEDGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKRPCVLF 192
BLAST of RhoA vs. nr
Match: gi|952512237|gb|KRT79003.1| (ADP ribosylation factor [Oryctes borbonicus]) HSP 1 Score: 385.185 bits (988), Expect = 1.771e-133 Identity = 187/204 (91.67%), Postives = 195/204 (95.59%), Query Frame = 0 Query: 76 CWWLGSPSWT--MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 CW G + MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKEL KM+QEPVKP++GR+MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK+PC+LF Sbjct: 4 CWSEGGETNKGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELSKMRQEPVKPQDGRSMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKRPCILF 207
BLAST of RhoA vs. nr
Match: gi|1069687682|ref|XP_018304353.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex zeteki] >gi|1069687685|ref|XP_018304354.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex zeteki] >gi|1069687688|ref|XP_018304355.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex zeteki]) HSP 1 Score: 384.415 bits (986), Expect = 2.426e-133 Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK+ C LF Sbjct: 11 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKRGRCRLF 202
BLAST of RhoA vs. nr
Match: gi|1069687691|ref|XP_018304356.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex zeteki] >gi|1069687694|ref|XP_018304357.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex zeteki] >gi|1069687697|ref|XP_018304358.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex zeteki]) HSP 1 Score: 384.03 bits (985), Expect = 3.036e-133 Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK+ C LF Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKRGRCRLF 192
BLAST of RhoA vs. nr
Match: gi|954541144|ref|XP_014603622.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Polistes canadensis] >gi|954541146|ref|XP_014603707.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Polistes canadensis] >gi|972189075|ref|XP_015176173.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Polistes dominula] >gi|972189077|ref|XP_015176175.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Polistes dominula]) HSP 1 Score: 383.259 bits (983), Expect = 4.918e-133 Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR+MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK C L Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRSMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKGRCRLL 192
BLAST of RhoA vs. nr
Match: gi|1227996960|ref|XP_021930311.1| (ras-like GTP-binding protein Rho1 [Zootermopsis nevadensis] >gi|1227996962|ref|XP_021930312.1| ras-like GTP-binding protein Rho1 [Zootermopsis nevadensis] >gi|1227996964|ref|XP_021930313.1| ras-like GTP-binding protein Rho1 [Zootermopsis nevadensis] >gi|1233181567|ref|XP_022192344.1| ras-like GTP-binding protein Rho1 [Nilaparvata lugens] >gi|1233181569|ref|XP_022192345.1| ras-like GTP-binding protein Rho1 [Nilaparvata lugens] >gi|1233181571|ref|XP_022192346.1| ras-like GTP-binding protein Rho1 [Nilaparvata lugens] >gi|1233181573|ref|XP_022192347.1| ras-like GTP-binding protein Rho1 [Nilaparvata lugens] >gi|1339089022|ref|XP_023705638.1| ras-like GTP-binding protein Rho1 [Cryptotermes secundus] >gi|1339089024|ref|XP_023705639.1| ras-like GTP-binding protein Rho1 [Cryptotermes secundus] >gi|1339089026|ref|XP_023705640.1| ras-like GTP-binding protein Rho1 [Cryptotermes secundus] >gi|646707048|gb|KDR13982.1| Ras-like GTP-binding protein Rho1 [Zootermopsis nevadensis] >gi|1330918359|gb|PNF35598.1| Ras-like GTP-binding protein Rho1 [Cryptotermes secundus]) HSP 1 Score: 382.874 bits (982), Expect = 8.600e-133 Identity = 187/192 (97.40%), Postives = 187/192 (97.40%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK C L Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKGRCRLL 192
BLAST of RhoA vs. nr
Match: gi|665786640|ref|XP_008553407.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Microplitis demolitor] >gi|665786642|ref|XP_008553410.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Microplitis demolitor] >gi|665786644|ref|XP_008553420.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Microplitis demolitor]) HSP 1 Score: 382.489 bits (981), Expect = 1.107e-132 Identity = 187/192 (97.40%), Postives = 187/192 (97.40%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP TIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK C L Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPGTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKGKCRLL 192
BLAST of RhoA vs. nr
Match: gi|746854215|ref|XP_011057739.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Acromyrmex echinatior] >gi|746854217|ref|XP_011057740.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Acromyrmex echinatior] >gi|746854219|ref|XP_011057741.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Acromyrmex echinatior] >gi|1068387377|ref|XP_018060449.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Atta colombica] >gi|1068387380|ref|XP_018060450.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Atta colombica] >gi|1070152407|ref|XP_018358319.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070152411|ref|XP_018358320.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070152421|ref|XP_018358321.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070152425|ref|XP_018358322.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070152435|ref|XP_018358323.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070152439|ref|XP_018358324.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex cornetzi] >gi|1070198257|ref|XP_018354335.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex septentrionalis] >gi|1070198261|ref|XP_018354337.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex septentrionalis] >gi|1070198265|ref|XP_018354338.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex septentrionalis] >gi|1070198269|ref|XP_018354339.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex septentrionalis] >gi|1070198273|ref|XP_018354340.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Trachymyrmex septentrionalis]) HSP 1 Score: 382.489 bits (981), Expect = 1.803e-132 Identity = 186/192 (96.88%), Postives = 187/192 (97.40%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK+ C L Sbjct: 11 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKRGRCRLL 202
BLAST of RhoA vs. nr
Match: gi|746854221|ref|XP_011057742.1| (PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Acromyrmex echinatior] >gi|746854223|ref|XP_011057743.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Acromyrmex echinatior] >gi|801399462|ref|XP_012060241.1| PREDICTED: ras-like GTP-binding protein Rho1 [Atta cephalotes] >gi|1068387373|ref|XP_018060448.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387383|ref|XP_018060451.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387387|ref|XP_018060452.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387391|ref|XP_018060453.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387394|ref|XP_018060454.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387398|ref|XP_018060455.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1068387401|ref|XP_018060456.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X1 [Atta colombica] >gi|1070152443|ref|XP_018358325.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex cornetzi] >gi|1070152447|ref|XP_018358326.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex cornetzi] >gi|1070152451|ref|XP_018358327.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex cornetzi] >gi|1070198277|ref|XP_018354341.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex septentrionalis] >gi|1070198283|ref|XP_018354342.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex septentrionalis] >gi|1070198287|ref|XP_018354343.1| PREDICTED: ras-like GTP-binding protein Rho1 isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 381.719 bits (979), Expect = 1.832e-132 Identity = 186/192 (96.88%), Postives = 187/192 (97.40%), Query Frame = 0 Query: 86 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRTMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKKPCVLF 277 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGR MAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK+ C L Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKRGRCRLL 192 The following BLAST results are available for this feature:
BLAST of RhoA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of RhoA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of RhoA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold640_size121076:15729..17339+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold640_size121076-processed-gene-0.2 ID=snap_masked-scaffold640_size121076-processed-gene-0.2|Name=RhoA|organism=Tigriopus kingsejongensis|type=gene|length=1611bp|location=Sequence derived from alignment at scaffold640_size121076:15729..17339+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'RhoA' has the following synonyms
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