carnitine dehydratase, snap_masked-scaffold6762_size3619-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview


Name	carnitine dehydratase
Unique Name	snap_masked-scaffold6762_size3619-processed-gene-0.0
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of carnitine dehydratase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11")

HSP 1 Score: 256.144 bits (653), Expect = 6.224e-80
Identity = 153/382 (40.05%), Postives = 212/382 (55.50%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPD---TLIYARMTGWGQD-GPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGV--SGKGQVVDAAMVDGVPAMMGLIHGMLAQGK-----WSETRGDNWLDGGAPFYRCY-TCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQ--NDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRT-APVSPPAPGAIGGETNQVL-AALGYSESEIAGIVGR 608
            M L+    VE +GL  AP    +LAD GA VI VD         D++ RGK+S+ L+LK  +G +   KL+  S V +E FRPGVME+L L PD       +LIYAR++G+GQ+  P    AGHDINY++L+GAL  +G  +  PVPP+N+V D+GGG +    GI++A+ ER V  SGKGQ++D  +  G       +   L Q K     W   RG+N LD GA FY  Y T   G Y+SVG +EPQF+++LL+K  L    +  Q   DT      +D++A  F  KTR EW  IF   DACV PVL+  E   +  +      I+  G     PAP+ SRT A +S   P  IG  + ++L   LG+++ EI  ++  
Sbjct:    1 MALKGVRVVEMAGLAXAPFTSMILADFGASVIRVDNHPDAVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGA----SYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYPQFGGDT---KKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSSN-ELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISE 374

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 308.916 bits (790), Expect = 9.139e-99
Identity = 169/368 (45.92%), Postives = 228/368 (61.96%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDG--VVQAAPAPRFSRTAPVSPPAPG--AIGGETNQVLAALGYSESEI 602
            M LR    VE +GL P P  G +LAD GA+V+ V+R  +  E  +   RGKRS+ LDLKR +G+    ++ A + VL+E FR GVME+L LGP+    D P  LIYAR++G+GQ G +++ AGHDINYLAL+G L  +G +   P PPLN++AD+GGG +   LGI+ A+ ER  SG+GQV+D++MV+G   +   +      G W + RG N LDGGAPFY  Y  A G +++VGA+EPQF+ALLL+  GL       Q  +  W   +  +A  FA+KT+ EW  IF+G+DACV PVLTF EA  H H   R + I TDG  +    PAP  SRT P  P A    ++G  T +VL   G+S+ EI
Sbjct:    1 MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTGE--NFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPK-LIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGLESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFI-TDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEI 363

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 305.834 bits (782), Expect = 1.517e-97
Identity = 171/368 (46.47%), Postives = 225/368 (61.14%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAA--PAPRFSRTAPVSPPAPG--AIGGETNQVLAALGYSESEI 602
            M LR    +E +GL P P  G +LAD GA+V+ VDR  +   P+ + R GKRS+ LDLKR  G A   ++ A + VL+E FR GVME+L LGP+    D P  LIYAR++G+GQ G +++ AGHDINY+AL+G L  +G +   P PPLN++AD+GGG +   LGIL A+ ER  SG GQV+DA MV+G   +   +    A G W++ RG N LDGGAPFY  Y  A G +++VGA+EPQF+ LLL+  GL       Q     W   +  +A  FARKT+ EW  IF+G+DACV PVLT  EA  H H   R + I TD    A   PAP+ SRT P  P A    ++G  T +VL   G+S+ EI
Sbjct:    1 MALRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVNHPSHLAR-GKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPK-LIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGLESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFI-TDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEI 364

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 289.271 bits (739), Expect = 4.451e-91
Identity = 161/368 (43.75%), Postives = 213/368 (57.88%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINR--RGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGV-VQAAPAPRFSRTAPV-SPPAPGAIGGETNQVLAALGYSESEI 602
            M L+    VE SGL P P    +LAD GA V+ VDR   P    D++R  RGKRS+VLDLK+P G A   +L   S VL+E FR GVME+L LGP+    + P  LIYAR++G+GQ G + + AGHDINYLAL+G L  +G +   P  PLN++AD+ GG +   LGI+ A+ +R  +GKGQV+DA MV+G   +   +        W   RG N LDGGAPFY  Y  A G +++VGA+EPQF+ LL++  GL      +Q     W   +  +A  FA KT+ EW  IF+G+DACV PVLTF E   H H   R + I ++   V   PAP    T  + S      IG  T ++L   G+S  EI
Sbjct:    1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDR---PGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENP-RLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEI 364

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component)

HSP 1 Score: 227.639 bits (579), Expect = 1.508e-67
Identity = 124/300 (41.33%), Postives = 173/300 (57.67%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDC----PDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCA--CGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQ 544
            VE +GL P P  G LLAD GA V+ +D   +P    D+  R K S+ +DLK P        +++ + VLI+ FRPGV+ERLGL P +        L+ AR+TG+ +DG +   AGHDINYLA++G L  +G A   P PP N++ D+ GG    ++GIL A++ R  +G GQVV+A MVDG   +  +         W   RG+N LDGG P+Y  Y      G Y++VGALEP F+ +L+   GL +     + D  +W   R L+   FA +TR EWA +F+G+DACV PVL   E +
Sbjct:   15 VELAGLAPGPFCGMLLADYGASVLRIDGPRSPK--GDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGLDKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVLEQGELE 312

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4)

HSP 1 Score: 187.193 bits (474), Expect = 9.735e-53
Identity = 118/326 (36.20%), Postives = 168/326 (51.53%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRA-PVPPLNMVADYGGGTMFLLLGILSAVIERGVSG-KGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSAR--RDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPR 569
            VE +GL P P  G +LAD GADV  +D+K  PA    +NR GK    LDLK PE +     L   S VL++ +RPG +E++GL P    +    LI  +++G+GQ G  +Q  GHDINY+AL+G L      +   P PP NM+AD+ GG +    GILSA+  R  +G KG ++D +M +GV  +   +     Q     T       G  P YR Y      +++VGA+EP+F+  L +   +      D  D      +   DL ++ F +KTRD+WA IF+G + CV PVL   E   +     R +   T     A P+PR
Sbjct:   11 VEIAGLAPVPHCGMMLADFGADVTVIDKKN-PAIEQRLNR-GKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLF-TDKYALFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNV------DGRDLFVNPGKITEDLESR-FLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 1.103e-27
Identity = 104/375 (27.73%), Postives = 162/375 (43.20%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAAPAE-----PTDIN---------RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIAGIV 606
            P A   L DLGA+VI V+R  A  +     P  +N          R K+S+ +++K P G+    +L A   V +E + PG +  +GLG  D       ++Y  +TG+GQ GP +  AG+D    A++G +H  G  D  PV P   + D   G +F    I++ +I+R  +GKG  +D  ++    A +  +      G+    R         P+    T    GYL +GA   Q  A+L +   LPE     +  T H     R++L    +  FA +   +W  +FEGS     P+ +    FSEAQ  H  +           +    PA R+S+        P  +G  T  +L   L Y E  I  ++
Sbjct:   54 PFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG-LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELL 425

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 1.223e-27
Identity = 103/375 (27.47%), Postives = 163/375 (43.47%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAAPAE-----PTDIN---------RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIAGIV 606
            P A   L DLGA+VI V+R  A  +     P  +N          R K+S+ +++K P G+    +L A   V +E + PG +  +GLG +D       +IY  +TG+GQ GP +  AG+D    A++G +H  G  D  PV P   + D   G +F    I++ +++R  +GKG  +D  ++    A +  +      G+    R         P+    T    GYL +GA   Q  A++ +   LPE     +  T H     R++L    +  FA +   +W  +FEGS     P+ +    FSEAQ  H  +           +    PA R+S+        P  +G  T  +L   L Y E  I  ++
Sbjct:   54 PFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG-LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLL 425

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase)

HSP 1 Score: 111.309 bits (277), Expect = 3.903e-25
Identity = 115/385 (29.87%), Postives = 160/385 (41.56%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDR--KAAPAEPTDINR------------RGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDD---CPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMM-GLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPE--------AHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDG-----VVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIA 603
            +E       P  GQLLAD GA+VI V+   K  P      +R            R K+S+ +DL+ PEG A   +L+    +++E FRPG +E  GLG ++       LI  R++G+GQ GP+   AG      A+ G     G  DR P      + D    T F  LG L A+ +R  SG+GQVVD  + +GV A+M  +I      G   E  G N L   AP    Y  A G +  +GA        L +  G PE         HQA      H +   DL A      T D+   + +        + T  E    PH  ARQ+II         +      PR S T         A+G    ++    LG +E ++A
Sbjct:   16 LELGAFLAGPFCGQLLADFGAEVIKVEPPGKGDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGDSLAAT-FAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIRERTG-NILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGE---HQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLA 394

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 110.923 bits (276), Expect = 8.660e-25
Identity = 96/360 (26.67%), Postives = 156/360 (43.33%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAA---------PAEPTDIN-----RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVL 592
            P A   L DLGA+VI V+R  A         P   T+        R K+S+ +++K P+G+    +L A   V +E + PG +  +GLG +D  +    +IY  +TG+GQ GP +Q AG+D    A++G +H  G  +  PV P   + D   G ++    I++ +I++  +GKG  +D  ++    A +  I      G+    R         P+    T    GY+ VGA   Q  A + +   LPE     +  T H     R++L    ++ F  +   +W  +FEGS     P+      F+E Q  H  +           +    PA R+S+        P  +G  T  +L
Sbjct:   63 PFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG-LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHIL 419

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|667467188|sp|A9WC39.1|SMTB_CHLAA (RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit >gi|667467189|sp|Q1KLK0.1|SMTB_CHLAU RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit)

HSP 1 Score: 98.2117 bits (243), Expect = 1.013e-20
Identity = 113/390 (28.97%), Postives = 168/390 (43.08%), Query Frame = 0

Query:  259 APLAGQLLADLGADVITVD---------RKAAPAEPTDI-----NRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPP-LNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLI---HGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPE--------------AHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSE-AQF--HPHMAARQTIIATDG------VVQAAPAPRFSRTAPVSPPAPG-AIGGETNQVLAA-LGYSESEI 602
            AP    LL + GADV+ V+         R   P    D        R KRSV L+L+ PEG     +LIA S VL E FRPG +E+ GLG D        LI  R+TG+GQ GP+    G      A+ G  +  G     PV P    +ADY  G ++  +G+L A+  R  +G+GQ +DAA+ + V      +   +GM    K  E  G ++ +   P +  +    G ++++     +  A L    G PE              AH +D N+ V     RD +  +  R      A + E   A   P    ++ A F    H+ AR+ ++A D       ++     P+ S T P S  + G  +G  T +VL   LG  + +I
Sbjct:   24 APFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTG-LYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYR--KVRERHGSHYNEFACP-HGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIV-----RD-WCSSLTR------AEVLERCYATATPAAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSET-PGSIRSLGPKLGEHTEEVLKEILGMCDEQI 396

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BLAST of carnitine dehydratase vs. nr
Match: gi|1225934409|ref|WP_093927677.1| (CoA transferase [Sulfitobacter dubius])

HSP 1 Score: 508.834 bits (1309), Expect = 1.451e-174
Identity = 256/350 (73.14%), Postives = 288/350 (82.29%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSES 600
            VEFSGLGPAPLAGQLLADLGADVIT+DRKAAPA+P DINRRGKRSVVLDLK PEG AAA  +I+++ VLIEGFRPGVMERLGLGP DC + LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG A+  PVPPLNMVADYGGGTMFLL GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGM AQG WSE R  NWLDG APFYRCYTCA G +++VGALEPQF+A+LLEK  LP  + + QNDT  W+ R   +A AFA ++RD+WAA F+G+DACVAPVL+FSEA  HP MA+R  ++  +GV+Q+  APRF    PV P  P  IG +T  VLA +G S S
Sbjct:   16 VEFSGLGPAPLAGQLLADLGADVITIDRKAAPADPADINRRGKRSVVLDLKTPEGHAAARAMISSADVLIEGFRPGVMERLGLGPTDCSEKLIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSANAPPVPPLNMVADYGGGTMFLLFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMFAQGTWSEARAANWLDGAAPFYRCYTCADGKFVAVGALEPQFYAILLEKLDLPADYGSSQNDTATWAERTAEFAAAFATRSRDDWAAHFDGTDACVAPVLSFSEAPDHPQMASRGNMLKVNGVLQSGHAPRFGSGVPVMPSLPRPIGADTEAVLAEIGMSLS 365

[Close]

BLAST of carnitine dehydratase vs. nr
Match: gi|1097437954|emb|SFG94677.1| (alpha-methylacyl-CoA racemase [Sulfitobacter dubius])

HSP 1 Score: 508.064 bits (1307), Expect = 2.329e-174
Identity = 256/350 (73.14%), Postives = 288/350 (82.29%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSES 600
            VEFSGLGPAPLAGQLLADLGADVIT+DRKAAPA+P DINRRGKRSVVLDLK PEG AAA  +I+++ VLIEGFRPGVMERLGLGP DC + LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG A+  PVPPLNMVADYGGGTMFLL GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGM AQG WSE R  NWLDG APFYRCYTCA G +++VGALEPQF+A+LLEK  LP  + + QNDT  W+ R   +A AFA ++RD+WAA F+G+DACVAPVL+FSEA  HP MA+R  ++  +GV+Q+  APRF    PV P  P  IG +T  VLA +G S S
Sbjct:   14 VEFSGLGPAPLAGQLLADLGADVITIDRKAAPADPADINRRGKRSVVLDLKTPEGHAAARAMISSADVLIEGFRPGVMERLGLGPTDCSEKLIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSANAPPVPPLNMVADYGGGTMFLLFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMFAQGTWSEARAANWLDGAAPFYRCYTCADGKFVAVGALEPQFYAILLEKLDLPADYGSSQNDTATWAERTAEFAAAFATRSRDDWAAHFDGTDACVAPVLSFSEAPDHPQMASRGNMLKVNGVLQSGHAPRFGSGVPVMPSLPRPIGADTEAVLAEIGMSLS 363

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BLAST of carnitine dehydratase vs. nr
Match: gi|751944891|gb|KIN65843.1| (L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter noctilucae])

HSP 1 Score: 507.294 bits (1305), Expect = 3.794e-174
Identity = 249/345 (72.17%), Postives = 281/345 (81.45%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAAL 595
            VEFSGLGPAPLAGQLLADLGADVITVDRK APA+PTDINRRGK+SVVLDLK   GL  A  LIA + V+IEGFRPGVMERLGLGP+ CP+TLIYARMTGWGQ GPW++ AGHDINYLALTGALHAMG  D  PVPPLN+VADYGGG+MFL+ GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQG+W+ETR  NWLDG APFYRCYTCA G +++VGALEPQF+++LL+  GL   + A QND   WS R   +A  FA ++RDEWA++F+G D CVAPVL FSEA  HPHMAAR    A  GV QAAPAPRFS   P     P AIG +T  +L++L
Sbjct:    2 VEFSGLGPAPLAGQLLADLGADVITVDRKVAPADPTDINRRGKKSVVLDLKSEAGLRDALALIATADVVIEGFRPGVMERLGLGPEACPNTLIYARMTGWGQTGPWSRVAGHDINYLALTGALHAMGSGDAPPVPPLNLVADYGGGSMFLIFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQGRWTETRSANWLDGAAPFYRCYTCADGKFIAVGALEPQFYSILLKTLGLDPDYLASQNDQTTWSDRTAEFAATFATRSRDEWASLFDGLDVCVAPVLGFSEAAQHPHMAARGVFAAPSGVQQAAPAPRFSGFTPQPVAPPNAIGADTQNILSSL 346

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BLAST of carnitine dehydratase vs. nr
Match: gi|640623884|ref|WP_025051900.1| (CoA transferase [Sulfitobacter noctilucae])

HSP 1 Score: 507.294 bits (1305), Expect = 4.096e-174
Identity = 249/345 (72.17%), Postives = 281/345 (81.45%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAAL 595
            VEFSGLGPAPLAGQLLADLGADVITVDRK APA+PTDINRRGK+SVVLDLK   GL  A  LIA + V+IEGFRPGVMERLGLGP+ CP+TLIYARMTGWGQ GPW++ AGHDINYLALTGALHAMG  D  PVPPLN+VADYGGG+MFL+ GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQG+W+ETR  NWLDG APFYRCYTCA G +++VGALEPQF+++LL+  GL   + A QND   WS R   +A  FA ++RDEWA++F+G D CVAPVL FSEA  HPHMAAR    A  GV QAAPAPRFS   P     P AIG +T  +L++L
Sbjct:   12 VEFSGLGPAPLAGQLLADLGADVITVDRKVAPADPTDINRRGKKSVVLDLKSEAGLRDALALIATADVVIEGFRPGVMERLGLGPEACPNTLIYARMTGWGQTGPWSRVAGHDINYLALTGALHAMGSGDAPPVPPLNLVADYGGGSMFLIFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQGRWTETRSANWLDGAAPFYRCYTCADGKFIAVGALEPQFYSILLKTLGLDPDYLASQNDQTTWSDRTAEFAATFATRSRDEWASLFDGLDVCVAPVLGFSEAAQHPHMAARGVFAAPSGVQQAAPAPRFSGFTPQPVAPPNAIGADTQNILSSL 356

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BLAST of carnitine dehydratase vs. nr
Match: gi|1110744046|ref|WP_071969204.1| (CoA transferase [Sulfitobacter sp. AM1-D1] >gi|1108550374|gb|APE41996.1| carnitine dehydratase [Sulfitobacter sp. AM1-D1])

HSP 1 Score: 501.516 bits (1290), Expect = 8.972e-172
Identity = 246/346 (71.10%), Postives = 282/346 (81.50%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALG 596
            VEF+GLGP PLAGQLLADLGA VI+VDR   PA+PTD+NRRGK SVVLDLK PEGLA A  L++AS VLIEGFRPGVMERLGLGP++CP++LIYARMTGWGQ GPWAQTAGHDINYL+LTGALHAMG+  R PVPPLN+VADYGGGTMFL+ G+L+AVIERGVSGKGQVVDAAMVDGVPAMMGL+HG+LA GKWSE RG N LDGGAPFYRCY C+ G Y++VGALEPQF+ALLL   GLP      QND   W  R   +A+ FAR+TRD WA +F+G+DACV PVL+FSEA  H HM  RQ+++   GV Q+  APRF RT P +P +P A G +T  VLAALG
Sbjct:   11 VEFAGLGPGPLAGQLLADLGAQVISVDRAERPADPTDVNRRGKLSVVLDLKSPEGLADAKALVSASDVLIEGFRPGVMERLGLGPENCPESLIYARMTGWGQSGPWAQTAGHDINYLSLTGALHAMGEPGRPPVPPLNLVADYGGGTMFLVFGMLAAVIERGVSGKGQVVDAAMVDGVPAMMGLVHGLLAAGKWSEDRGANLLDGGAPFYRCYACSDGRYVAVGALEPQFYALLLSGLGLPADLVETQNDPRTWPERTGQFAEIFARRTRDAWAEVFDGTDACVTPVLSFSEAAQHKHMRQRQSMVDVAGVQQSNKAPRFGRTKPDAPQSPRAQGADTLAVLAALG 356

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BLAST of carnitine dehydratase vs. nr
Match: gi|1056517222|ref|WP_067952107.1| (MULTISPECIES: CoA transferase [Sulfitobacter] >gi|1024461633|gb|KZX93843.1| carnitine dehydratase [Sulfitobacter sp. HI0023] >gi|1024710722|gb|KZZ62777.1| carnitine dehydratase [Sulfitobacter sp. HI0129])

HSP 1 Score: 500.745 bits (1288), Expect = 3.518e-171
Identity = 248/356 (69.66%), Postives = 283/356 (79.49%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIA-TDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESEIAGI 605
            +EF+GLGPAPLAGQLLADLGADVI VDR AAPA+PTD+NRRGKRSV L+LK P GL AA  LIA++ VLIEGFRPGVMERLGLGPD CPDTLIYARMTGWGQDGPWAQTAGHDINYLA+TGALHAMG+A R PVPPLN+VADYGGGTMFLL GILSA+  RG +GKGQVVDAAM++GVPAMMGLIH MLA+G W+E RG NWLDG APFYRCY CA G Y+SVGALEPQF+A+LL++ GLP      QNDT  W +R   +A  F  +TRDEWA  F G+DACVAPVL+F+EA  HP  AAR+  +   D  +QA PAPRFS T    P AP   GG+T +VLA + + E  +  I
Sbjct:   11 IEFAGLGPAPLAGQLLADLGADVIVVDRAAAPADPTDVNRRGKRSVALNLKSPAGLKAARALIASADVLIEGFRPGVMERLGLGPDACPDTLIYARMTGWGQDGPWAQTAGHDINYLAITGALHAMGEAGRPPVPPLNLVADYGGGTMFLLFGILSALFARGTTGKGQVVDAAMIEGVPAMMGLIHSMLARGTWTEERGANWLDGAAPFYRCYACADGRYISVGALEPQFYAILLDRLGLPADLAQTQNDTKTWPSRTREFADLFLTRTRDEWAEHFAGTDACVAPVLSFAEAPRHPQNAAREVFLTDADVPLQAMPAPRFSGTPCAEPAAPRPPGGDTKEVLAEINFDEDLLDQI 366

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BLAST of carnitine dehydratase vs. nr
Match: gi|640614784|ref|WP_025042846.1| (CoA transferase [Sulfitobacter geojensis] >gi|722013840|gb|KHA50351.1| L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter geojensis])

HSP 1 Score: 488.804 bits (1257), Expect = 4.724e-167
Identity = 235/320 (73.44%), Postives = 263/320 (82.19%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRF 570
            VEFSGLGPAPLAGQLLADLGA V TVDRK    +P DINRRGK+SVV+DLK   G+ AA  +I AS VLIEGFRPGVMERLGLGP+ CP+ LIYARMTGWGQ GPWA  AGHDINYL LTGAL+AMG+    PVPPLN+VADYGGGTMFL+ GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIH MLAQG W E R  NWLDG APFYRCYTCA G +++VGALEPQF A+LLEK GLP  +  DQND  +W AR   +AQ FA ++RD+WA IF+GSDACV PVL+FSEA+ HPHMA R T++  D V+QAAPAPRF
Sbjct:   12 VEFSGLGPAPLAGQLLADLGAQVTTVDRKEVVPDPADINRRGKQSVVMDLKSDAGIKAARDVIDASDVLIEGFRPGVMERLGLGPETCPENLIYARMTGWGQTGPWAHMAGHDINYLGLTGALNAMGEGGAPPVPPLNLVADYGGGTMFLIFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHAMLAQGSWREDRASNWLDGAAPFYRCYTCADGKFVAVGALEPQFFAILLEKTGLPAVYGKDQNDRTNWPARTAEFAQIFASRSRDDWAKIFDGSDACVTPVLSFSEAENHPHMAQRATLVRRDAVLQAAPAPRF 331

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BLAST of carnitine dehydratase vs. nr
Match: gi|1032594806|ref|WP_064225195.1| (CoA transferase [Sulfitobacter geojensis] >gi|1032112532|gb|OAN84913.1| carnitine dehydratase [Sulfitobacter geojensis])

HSP 1 Score: 484.952 bits (1247), Expect = 1.137e-165
Identity = 238/330 (72.12%), Postives = 266/330 (80.61%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPA 580
            VEFSGLGPAPLAGQLLADLGA V TVDRK    +PTDINRRGK+SVVLDLK   G+ AA  +I AS VLIEGFRPGVMERL LGP+ C + LIYARMTGWGQ GPWA  AGHDINYL LTGAL+AMG  D  PVPPLN+VADYGGGTMFL+ GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIH MLAQG W E R  NWLDG APFYRCYTCA G +++VGALEPQF A+LL+K GLP  +  DQND  +W AR   +AQ FA ++RDEWA IF+G+DACV PVL+FSEA+ HPHMA R T++  D V+QAAPAPRF    P+ P A
Sbjct:   12 VEFSGLGPAPLAGQLLADLGAQVTTVDRKEVVPDPTDINRRGKQSVVLDLKSDAGIKAARDVIDASDVLIEGFRPGVMERLDLGPETCAEKLIYARMTGWGQTGPWAHMAGHDINYLGLTGALNAMGAGDAPPVPPLNLVADYGGGTMFLIFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHAMLAQGSWREHRASNWLDGAAPFYRCYTCADGKFVAVGALEPQFFAILLKKTGLPAVYGKDQNDRSNWPARTAEFAQIFASRSRDEWAKIFDGTDACVTPVLSFSEAENHPHMAQRATLVRRDAVLQAAPAPRFQ---PLRPSA 338

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BLAST of carnitine dehydratase vs. nr
Match: gi|640635705|ref|WP_025063696.1| (hypothetical protein [Sulfitobacter guttiformis] >gi|751953234|gb|KIN74147.1| Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily [Sulfitobacter guttiformis KCTC 32187])

HSP 1 Score: 480.33 bits (1235), Expect = 5.210e-164
Identity = 230/251 (91.63%), Postives = 235/251 (93.63%), Query Frame = 0

Query:    1 MPEMVPLYEELCELAGGGDHAARFLSFYTPPPYLASCSQAVWGGKQPVLVRNYDYNPRAFYSLVLRTKWMGRAVMGTSDGLWGLVDGVNDKGLSISLTFGGRRVVGEGFGVPLILRYVLQTCETAEHAGEVLARVPTHMSYNVTVLDRKRTYLTVMMSPDRPAIVTNAAVATNHQENVEWISHARFTSTVERERFLLQRLRLHRDPEEKFINAFLRPPLYSTAFRHGFGTLYTAVYRPRKQEMELRWPDAV 251
            MPEMVPLYEELCELAGGGDHAARFLSFYTPP YLASCSQAVW GKQPVLVRNYDYNPRAF SLVLRT WMGR+VMGTSDGLWGLVDGVNDKGLSISLTFGGRRVVGEGFGVPLILRYVLQ CETAE A EVLARVPTHMSYNVTVLDRKR YLTVMM+PDRPA++T  AVATNHQENVEWISHARFT+TVERERFL QRLRLH DPEEKFIN FLRPPLYSTAFRHGFGTLYTAVYRPRK EMELRWP  V
Sbjct:   52 MPEMVPLYEELCELAGGGDHAARFLSFYTPPAYLASCSQAVWAGKQPVLVRNYDYNPRAFDSLVLRTAWMGRSVMGTSDGLWGLVDGVNDKGLSISLTFGGRRVVGEGFGVPLILRYVLQICETAEAAAEVLARVPTHMSYNVTVLDRKRNYLTVMMAPDRPAVITQRAVATNHQENVEWISHARFTATVERERFLQQRLRLHHDPEEKFINLFLRPPLYSTAFRHGFGTLYTAVYRPRKMEMELRWPGVV 302

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BLAST of carnitine dehydratase vs. nr
Match: gi|740092918|ref|WP_037942178.1| (CoA transferase [Sulfitobacter sp. CB2047] >gi|668746421|gb|KFC27631.1| carnitine dehydratase [Sulfitobacter sp. CB2047])

HSP 1 Score: 470.315 bits (1209), Expect = 1.451e-159
Identity = 236/351 (67.24%), Postives = 273/351 (77.78%), Query Frame = 0

Query:  245 LRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAAL 595
            L+  + +E +G+GP PLAGQLLADLGADVI +DR  APA+ TD+NRRGKRSV LDLK  EG + A  LI  +G++IEGFRPGVMERLGLGPDD  +T+I+ R+TGWGQDGP +Q+AGHDINYL LTGAL AMG  D  P PPLN+VADYGGGTMFLLLGIL+AV ER  SGKGQVVDAAMVDGV AMMGL H   A+G WSE R  N LDGGAPFYRCY      ++SVG LEPQF ALLLEKAGLP  H ADQND  +W+ R +LYAQAFA KT+ EW+ IF G+DACVAPVL+  EA  HPHMAARQT++  DGV+QAAPAPRFSR+ P     P A+GG+T  +  AL
Sbjct:    5 LKGLEVIEMAGIGPGPLAGQLLADLGADVIVIDRAEAPADKTDVNRRGKRSVFLDLKSEEGRSTAQALINRAGIVIEGFRPGVMERLGLGPDDLDETVIFGRITGWGQDGPLSQSAGHDINYLGLTGALAAMGTVDNPPPPPLNLVADYGGGTMFLLLGILAAVFERQTSGKGQVVDAAMVDGVSAMMGLFHTFKARGAWSENRASNLLDGGAPFYRCYRTKDDLFMSVGPLEPQFFALLLEKAGLPAEHSADQNDPSNWAERAELYAQAFASKTQAEWSGIFSGTDACVAPVLSMDEAASHPHMAARQTLVEVDGVLQAAPAPRFSRSKPTGINTPKAMGGDTAAIRRAL 355

The following BLAST results are available for this feature:

BLAST of carnitine dehydratase vs. L. salmonis genes
BLAST of carnitine dehydratase vs. SwissProt
BLAST of carnitine dehydratase vs. nr

BLAST of carnitine dehydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000001226	6.224e-80	40.05	supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 ...	[more]

BLAST of carnitine dehydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|341940628\|sp\|O09174.4\|AMACR_MOUSE	9.139e-99	45.92	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|13637497\|sp\|P70473.3\|AMACR_RAT	1.517e-97	46.47	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|313104070\|sp\|Q9UHK6.2\|AMACR_HUMAN	4.451e-91	43.75	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|74620364\|sp\|Q8J0F0.1\|CEFD2_ACRCH	1.508e-67	41.33	RecName: Full=Isopenicillin N epimerase component ...	[more]
gi\|29840845\|sp\|Q09618.3\|YS74_CAEEL	9.735e-53	36.20	RecName: Full=CaiB/baiF CoA-transferase family pro...	[more]
gi\|71152392\|sp\|Q68FU4.1\|SUCHY_RAT	1.103e-27	27.73	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|408360016\|sp\|Q7TNE1.2\|SUCHY_MOUSE	1.223e-27	27.47	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467185\|sp\|A9WGE3.1\|SCCT_CHLAA	3.903e-25	29.87	RecName: Full=Succinyl-CoA--D-citramalate CoA-tran...	[more]
gi\|71152390\|sp\|Q9HAC7.2\|SUCHY_HUMAN	8.660e-25	26.67	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467188\|sp\|A9WC39.1\|SMTB_CHLAA	1.013e-20	28.97	RecName: Full=Succinyl-CoA--L-malate CoA-transfera...	[more]

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BLAST of carnitine dehydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1225934409\|ref\|WP_093927677.1\|	1.451e-174	73.14	CoA transferase [Sulfitobacter dubius]	[more]
gi\|1097437954\|emb\|SFG94677.1\|	2.329e-174	73.14	alpha-methylacyl-CoA racemase [Sulfitobacter dubiu...	[more]
gi\|751944891\|gb\|KIN65843.1\|	3.794e-174	72.17	L-carnitine dehydratase/bile acid-inducible protei...	[more]
gi\|640623884\|ref\|WP_025051900.1\|	4.096e-174	72.17	CoA transferase [Sulfitobacter noctilucae]	[more]
gi\|1110744046\|ref\|WP_071969204.1\|	8.972e-172	71.10	CoA transferase [Sulfitobacter sp. AM1-D1] >gi\|110...	[more]
gi\|1056517222\|ref\|WP_067952107.1\|	3.518e-171	69.66	MULTISPECIES: CoA transferase [Sulfitobacter] >gi\|...	[more]
gi\|640614784\|ref\|WP_025042846.1\|	4.724e-167	73.44	CoA transferase [Sulfitobacter geojensis] >gi\|7220...	[more]
gi\|1032594806\|ref\|WP_064225195.1\|	1.137e-165	72.12	CoA transferase [Sulfitobacter geojensis] >gi\|1032...	[more]
gi\|640635705\|ref\|WP_025063696.1\|	5.210e-164	91.63	hypothetical protein [Sulfitobacter guttiformis] >...	[more]
gi\|740092918\|ref\|WP_037942178.1\|	1.451e-159	67.24	CoA transferase [Sulfitobacter sp. CB2047] >gi\|668...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold6762_size3619	supercontig	scaffold6762_size3619:318..2242 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold6762_size3619-processed-gene-0.0-mRNA-1	snap_masked-scaffold6762_size3619-processed-gene-0.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold6762_size3619:318..2242+

gene from alignment at scaffold6762_size3619:318..2242+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold6762_size3619-processed-gene-0.0 ID=snap_masked-scaffold6762_size3619-processed-gene-0.0|Name=carnitine dehydratase|organism=Tigriopus kingsejongensis|type=gene|length=1925bp|location=Sequence derived from alignment at scaffold6762_size3619:318..2242+ (Tigriopus kingsejongensis)
ATGCCGGAGATGGTGCCGCTGTACGAAGAGTTGTGCGAACTGGCAGGTGG
CGGCGATCACGCCGCGCGGTTCCTGAGTTTTTACACCCCGCCGCCCTATC
TGGCGAGCTGTTCGCAGGCCGTCTGGGGCGGCAAGCAACCCGTTCTTGTG
CGCAATTACGACTACAACCCCCGGGCCTTCTACAGCCTTGTGCTGCGCAC
CAAATGGATGGGGCGTGCGGTGATGGGCACGTCTGACGGTCTGTGGGGGC
TGGTGGACGGGGTGAACGACAAGGGGCTGTCAATCTCGCTCACGTTCGGC
GGGCGGCGTGTGGTGGGTGAAGGGTTCGGCGTGCCGCTGATCCTGCGCTA
TGTGCTGCAAACTTGCGAAACGGCGGAACATGCGGGCGAGGTATTGGCCC
GCGTGCCTACGCACATGAGCTATAACGTGACCGTGCTGGACAGAAAGCGG
ACCTACCTGACGGTCATGATGTCGCCGGACCGGCCCGCGATTGTGACAAA
TGCGGCGGTGGCCACGAACCATCAGGAAAACGTTGAATGGATCAGCCACG
CGCGGTTTACATCTACGGTCGAGCGCGAGCGCTTCTTGCTGCAACGGTTG
CGTCTGCACCGTGATCCGGAAGAGAAGTTCATCAACGCGTTTTTGCGGCC
GCCACTCTATTCCACGGCGTTCCGGCACGGGTTTGGCACGCTCTATACGG
CGGTTTACAGACCTCGCAAGCAAGAGATGGAGTTGCGGTGGCCTGATGTA
ATCTGGCCGCTGTCGTTGAAAGAATTTGTTGAAGGGGCGCGTGAAGTGAC
CCTGCCGGGAGTTATATAATGTCGGGACCGTTAGCATCGTTGAAGGCGGT
TGAGTTTTCGGGCCTTGGCCCCGCGCCGCTGGCCGGGCAGTTGCTGGCCG
ATCTGGGGGCGGATGTGATCACCGTTGATCGCAAGGCAGCGCCTGCGGAG
CCGACGGATATCAACCGCCGTGGCAAACGCTCGGTTGTGCTGGATCTCAA
GCGGCCAGAGGGGCTGGCGGCGGCGCACAAGCTGATTGCGGCCAGTGGTG
TGTTGATCGAAGGGTTCCGTCCCGGCGTGATGGAGCGGTTGGGCCTCGGG
CCTGATGACTGCCCCGATACGCTGATCTATGCGCGGATGACCGGCTGGGG
ACAGGACGGGCCATGGGCGCAGACGGCAGGGCACGACATTAACTATCTGG
CGCTGACAGGCGCGCTGCACGCCATGGGCGATGCCGACCGCGCGCCTGTG
CCGCCGCTGAACATGGTCGCTGACTACGGCGGGGGCACGATGTTTCTGCT
ACTGGGTATCCTGAGCGCTGTGATCGAGCGCGGCGTGTCCGGTAAGGGGC
AGGTGGTCGATGCGGCGATGGTTGACGGGGTGCCTGCGATGATGGGCCTG
ATCCACGGGATGCTGGCGCAGGGAAAGTGGAGCGAGACGCGTGGCGACAA
CTGGCTGGACGGCGGCGCGCCGTTCTACCGGTGCTATACTTGCGCTTGCG
GTGGCTATCTCTCGGTTGGGGCGTTGGAGCCCCAATTTCATGCGCTACTG
CTGGAGAAGGCGGGGCTGCCGGAGGCACATCAGGCGGACCAGAACGACAC
AGTTCATTGGTCTGCGCGGCGTGACCTCTATGCGCAGGCTTTTGCGCGCA
AGACACGCGATGAATGGGCGGCAATTTTTGAGGGCAGTGATGCCTGTGTG
GCGCCTGTTTTGACGTTCTCGGAGGCGCAATTCCATCCGCATATGGCCGC
GCGGCAGACAATTATTGCGACGGACGGTGTTGTGCAGGCCGCCCCTGCGC
CCCGATTTAGCAGGACCGCGCCCGTTTCACCTCCCGCGCCGGGAGCCATT
GGAGGTGAAACAAATCAGGTGCTTGCAGCGTTAGGATATAGCGAGAGCGA
GATTGCCGGAATCGTAGGCCGGTGA

Synonyms

The feature 'carnitine dehydratase' has the following synonyms


Synonym
Tk08166

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