gaba-gated ion partial, snap_masked-scaffold691_size110934-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 500.36 bits (1287), Expect = 2.443e-174 Identity = 267/505 (52.87%), Postives = 328/505 (64.95%), Query Frame = 0 Query: 17 GALACNGRFTDFCDNFEANDSEEDETIASSAFSPSPATSRRDHEPWGLILSSLNRTKRTASSPSFQPFRNERELSKQISSILDTLFNSG-YDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMD-QLGLAQYNLINWTHGTYN----GMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKDCKLVMLMAQHDVMHGRMPQLPERQESTVMDTDGICTDEDI--LTPPDSTTPSRDDVFNFNGRP--CELMRALE-------EDRDCWTRFADFIIDYLQYFNCCRSIRKTEMFQ 504 G CN DFCD +E + + P R H NR K SS F +R + ELS ++S LD L + YD QIRP++G P++V VN AIRSMGPVDEQKQ+F MDCYFRQYWTD RL YN+++L ELPMNWQ L KIWRPDTF NGK SYLHKMTVPNRFIRI+PDGRISYSQRLT+KARC+MDLRKFPLD+Q CPLEIGSFGH DEI+Y W+ PLSMD +LGLAQY+LI+W + + +NVS + LHF F+R++G+Y+LQIYIPLTLIV CSWVTFWL KT KG EIPARTSLG + L++VTIGFGGKSKP+VGYATALDVFI+LCF+ VFAAL+EFAF+NF+DTLVRRLK+ D+ +L L + V + + + R ST + I DE I LTP + G+P +++R L + + W F RS+R +M+Q Sbjct: 18 GTSGCNQYLHDFCDTYEEHVQQHH---------AQPPHDHRHHHG--------NRNKTKRSSRIF--YRRQDELSSRVSRTLDALLSENRYDRQIRPQIGDSPIKVSVNFAIRSMGPVDEQKQLFLMDCYFRQYWTDPRLVYNSSKLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNWTSMPLSMDKKLGLAQYHLISWNNSAFTRYSRNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVTIGFGGKSKPRVGYATALDVFIVLCFMTVFAALIEFAFINFIDTLVRRLKKNDELEELSHLYPRSAV-YETVSRSYHRSISTGQGDELI--DESIITLTPAQNRWKKVQATVTSRGKPNFSKIIRQLHLEEQRKNQSKSIWLXF--------------RSVRSLDMYQ 486
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 394.815 bits (1013), Expect = 6.364e-133 Identity = 195/361 (54.02%), Postives = 258/361 (71.47%), Query Frame = 0 Query: 48 FSPSPATSRRDHEPWGLILSS-LNRTKRTAS--SPSFQPFRNERELSKQISSILDTLF-NSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSV-KPLSMDQLGLAQYNLINWTHGTYNGMDDS---------RNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVR 394 F SP + ++E L + R R S +F ++ +E ++++S LD L S YD +IRP++G P++V +N++I SMGPVDE + FSMDCYFRQ W D RL+YN + + L +NW FL KIW PDTF NGK+S+LHK+TVPNRF+R++P G++SYSQRLTI A C M+L+KFP DTQ CPL++GSFGH ++IY+W K +S ++LGLAQ++LIN++ +YN ++ S RN S ++ F FERQSG+++LQIY PLTLIV CSWV FWL KT KG E PART LGA+SVLS+V IGF GK +P+VGYATALDVFIILCF VFAALVEFA +NF+DT ++ Sbjct: 19 FHASPLCQQDENEEMCLSMEEEKERDDRLVSRYKRAFTAYKTGQEQTQKVSETLDHLLVYSFYDKRIRPKLGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERLKYNTSGVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKPKAVSFNKLGLAQFHLINYS--SYNIIEPSLRLTEKGNYRNDSSSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSIVNIGFTGKDRPKVGYATALDVFIILCFFTVFAALVEFACINFIDTFIK 377
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 345.51 bits (885), Expect = 3.302e-109 Identity = 176/398 (44.22%), Postives = 246/398 (61.81%), Query Frame = 0 Query: 26 TDFCDNF-EANDSEEDETIASSAFSPSPATSRRDHEPWGLILS-----------SLNRTKRTASSPSFQPFRNERELSKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTR-LRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQLGLA---QYNLINWTHGTYNGMDDS------RNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDK 401 TD+ D F + DS D + + + S S E G +L+ ++ + + S + +E+ QI L L S Y+ +IRP G P +V +N+ I SMGPVDE+ Q + +D YFRQ W D RL +N T + ELP+NWQ LNKIW+PDT+F NGK+S +HK+TVPNRF+RI+PDG +S+SQRLTI A+C M+L+KFP D+Q+CPL IGS+G+ ADE++Y W L + L A Q+NL+ W + + RN S ++F F+RQ GF++LQIY P+ +IVMCSWV FW+ KT + P+R SLG +S LSV IGF GK KP V Y TALD+FII+CF+ VF +LVE+A +N++ + R K ++K Sbjct: 404 TDYMDRFIDEQDSTRDRSSSPNYHSLLYGASNNTGESHGSVLTVFTIFILYFLQEISEVQCQEFNDSLNFYSTGKEVRDQIQVTLTKLLTS-YNRRIRPNFGGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSFNATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKT----DAPSRVSLGVASSLSVTKIGFAGKGKPNVEYPTALDIFIIICFMTVFLSLVEYALINYISVFISRYKAREK 796
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 218.779 bits (556), Expect = 2.269e-65 Identity = 107/297 (36.03%), Postives = 172/297 (57.91%), Query Frame = 0 Query: 90 LSKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKP-LSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFA 384 +++ I ++LD GYD ++RP G PL V ++ I S + E +++ Y QYW D RL ++ + L ++ F KIW PDTFF N K S+LH +T N+ +R+ DG I+Y R T C MDL +PLD+Q+C +EI S+G+ +++ W KP + ++ L Q+ ++ W + ++ L FK +R G++V Q Y+P LIVM SWV+FW+ A AR +LG ++VL++ TI G +S P++ Y A+D+++++CF+ VFAAL+E+A Sbjct: 80 VTRTIGNLLD-----GYDIRLRPNFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS----ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 367
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 185.267 bits (469), Expect = 1.548e-52 Identity = 104/300 (34.67%), Postives = 165/300 (55.00%), Query Frame = 0 Query: 106 YDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNN---TRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVK-PLSMDQ-LGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGG-KSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 YD P+ EV ++ + S+ +DE ++ D +F Q W D RLR + + R LP+ W L KIWRPD+FF N K MT+PN +I + D I Y +LT+ C M + +P DTQ C LEI S H D++I+ W + PL +D+ + L Q LI+ + + + + + FKF+R+ G+Y+ Y+P LIV+ SW++FW++ A +PAR +LG +S+L++ T KS P V Y A+DVF+ C + VF +L+E+A +N + + +++K Sbjct: 8 YDKMRPPKYKGNATEVLFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEW--LEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEA----VPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKK 301
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 180.644 bits (457), Expect = 1.022e-51 Identity = 103/290 (35.52%), Postives = 168/290 (57.93%), Query Frame = 0 Query: 86 NERELSKQISSILDTLFNSGYDHQIRPRVGSQ---PLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRY-NNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVK-PLS-MDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVF 368 N R+ KQ+ LD++ +GYD +IRP + P + VN+ +R++ +D+ K +S+ FR+ W D RLRY ++T + K+W PDTFF N K + H++ VPN ++RI P+G I YS R+++ C MDLR +PLD Q C L+I S+G D++IY W K P+ + L L ++ L + + ++ S + + F+R+ +Y++ IY+P ++V+ SWV+FWL + A IPAR SLG +++L++ T G ++ P V Y A+DV+ Sbjct: 7 NYRQKEKQV---LDSILGTGYDKRIRPSGKNDTDGPATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNA----IPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVW 289
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5") HSP 1 Score: 179.104 bits (453), Expect = 4.161e-51 Identity = 95/242 (39.26%), Postives = 147/242 (60.74%), Query Frame = 0 Query: 142 MDCYFRQYWTDFRLRY----NNT---RLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW--SVKPLSMD-QLGLAQYNLINWTHGTYNGMDDSRNV------------SKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVG 360 MDCYFRQYW RL + NNT ++ +L +N + L KIW+PDT+F NG SY+H +T PN+ +RI+ G I+YS RLTIKA+C M L+ FP+D Q CPL +GS+ + D++ Y+W S ++ + +L L+Q+++I Y ++ SRN S + + +R +G++++QIY+P TLIV+ SWV FWL + A R LG ++VL++ TI ++ P++G Sbjct: 1 MDCYFRQYWRXERLSFTGLKNNTHHLKIDQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSSNAVAYEGKLKLSQFDIIT---TAYRSLNFSRNTDDRYTLPLVGGFSVLQVVIALQRHTGYFLIQIYLPCTLIVVLSWVGFWLNREATSD----RVGLGITTVLTLSTIALDSRTDLPKMG 235
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 165.236 bits (417), Expect = 1.228e-46 Identity = 97/267 (36.33%), Postives = 141/267 (52.81%), Query Frame = 0 Query: 140 FSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWS-VKPLSM---DQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKD 402 + D Y RQ W+D RL + + + + IW+P+ FF N K + +TVPN IRI P+G I Y RL +K C M+L ++PLDTQ C ++I SF E++ +W LS+ L + Q+ + T + + N S ++ F R GF+++Q Y+P LIV SWV+FW+ +PAR +LG ++L+V + G S PQ Y A+DV++ +C VFAALVEF TLV L RKD D Sbjct: 3 YVTDTYLRQKWSDSRLSHPDIKSPLDLAXPNLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDC----VPARVTLGVITLLTVSS-QVSGTSVPQTSYVKAIDVWMGVCTAFVFAALVEF-------TLVNYLWRKDSD 257
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 159.458 bits (402), Expect = 3.936e-43 Identity = 113/360 (31.39%), Postives = 174/360 (48.33%), Query Frame = 0 Query: 86 NERELSKQISSILDTLFNSG-YDHQIRPR----VGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNT--------------------------------RLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWS-VKPLSM-DQLGL-AQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFG-GKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKDCK 404 N R+ K+I LD++ YD +IRP S L V VN+ +RS +D+ K +S RQ W D RLR+ + ++R L M +K+W DTFF N K H + N ++R+ P+G + YS R+++ C M L FPLD Q C L++ S+G +++IY+W P+ M L L + L +T+ + + + S + + F RQ FYVL IYIP +IV+ SW++FW+ A +PAR SLG + +L++ T S P V Y A+DV+ +C VF+AL+E+A +N+ + K K+ K Sbjct: 40 NYRQEEKKI---LDSVLGPDVYDKRIRPSGLNSTDSASL-VTVNIFVRSFSNIDDVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDS--SKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKA----VPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYASRSDAQRAAKQKEAK 389
BLAST of gaba-gated ion partial vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 142.895 bits (359), Expect = 2.098e-37 Identity = 107/339 (31.56%), Postives = 164/339 (48.38%), Query Frame = 0 Query: 92 KQISSILDTLFNSGYDHQIRP--RVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQ---FLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGS----------------------FGHDADEIIYKWS-VKPLSMD-QLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWL--RKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 K+ ILD+L + YD + P +G + EV + + +RS+G ++ + +D Y RQ+W D RL N+ L E PM+ + +W+P+ +F N K + +TVPN +RI P G I Y RL +K C M+L KFPLD Q C +EI S E+I +W KP+ + ++ + Q+ + N S +L +R GF+++Q YIP LIV+ SWV+FW+ A + + T L SS S V P V Y A+D+++ C +FAAL+EF F+N+ + RR K+K Sbjct: 6 KKALDILDSLLQN-YDRRATPTNHIG-KATEVAIKLYVRSLGSINPDTMV--IDLYLRQHWFDSRL--NHPGLLE-PMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEV-----PLVSYVKAIDIWMGACTAFIFAALLEFTFVNY---MWRRGKKK 329
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|126302548|sp|Q16445.2|GBRA6_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 240.736 bits (613), Expect = 1.388e-72 Identity = 126/318 (39.62%), Postives = 190/318 (59.75%), Query Frame = 0 Query: 91 SKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQL-----GLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTL-VRRLKRKDK 401 S+ +S ILD L GYD+++RP G EV+ ++ + S GPV + + ++MD +FRQ WTD RL++ L +N ++KIW PDTFF NGK+S H MT PN+ RI +G I Y+ RLTI A C M L FP+D CPL+ GS+ + EIIY W PL ++ L QY+LI T + ++ + ++F +R+ G++++QIY P + V+ S V+FW+ K + +PART G ++VL++ T+ + S P+V YATA+D FI +CF VF+AL+EFA +N+ L ++ KRK + Sbjct: 29 SENVSRILDNLLE-GYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPT-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQ 340
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|143811394|sp|P20237.2|GBRA4_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 243.432 bits (620), Expect = 1.560e-72 Identity = 137/400 (34.25%), Postives = 221/400 (55.25%), Query Frame = 0 Query: 82 QPFRNERE---LSKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKP-----LSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKDCKLVMLMAQHDVMHGRMPQLPERQESTVMDTDGICTDEDILTPPDSTTPSRDDVFNFNGRPCELMRALEE 472 P +N++E + + ILD+L + GYD+++RP G EV+ ++ + S GPV + + ++MD +FRQ W D RL+Y+ + L +N + K+W PDTFF NGK+S H MT PN+ RI +G I Y+ RLTI A C M L FP+D CPL+ GS+ + E+IY W+ P + + L QY+LI T + + + ++F R+ G++++Q YIP + V+ S V+FW+ K + +PART G ++VL++ T+ + S P+V YATA+D FI +CF VF+AL+EFA +N+ T V+ K K K K ++ V+ + P+ P + + + + + L +S SR DV N + + +++ E Sbjct: 33 SPGQNQKEEKLCPENFTRILDSLLD-GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF-TNVQMEKAKRKTSKAPQEISAAPVLREKHPETPLQNTNANLS---MRKRANALVHSESDVGSRTDVGNHSSKSSTVVQGSSE 422
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|120784|sp|P22300.1|GBRG2_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor) HSP 1 Score: 239.58 bits (610), Expect = 6.365e-72 Identity = 120/300 (40.00%), Postives = 189/300 (63.00%), Query Frame = 0 Query: 94 ISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW---SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIG-FGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFL 389 ++ IL+ L GYD+++RP +G +P + +M + S+GPV+ +++D +F Q W D RL++N+T ++ L +N + KIW PDTFF N K++ H +T PNR +RI DGR+ Y+ RLTI A CQ+ L FP+D CPLE S+G+ +EI+Y+W SV+ L Q++ + + T S + + ++F R+ G++ +Q YIP TLIV+ SWV+FW+ K A +PARTSLG ++VL++ T+ KS P+V Y TA+D+F+ +CF+ VF+ALVE+ L++ Sbjct: 66 VTVILNNLLE-GYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFGQTWYDRRLKFNST-IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVSDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA----VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|120788|sp|P18508.1|GBRG2_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor) HSP 1 Score: 238.81 bits (608), Expect = 9.039e-72 Identity = 120/300 (40.00%), Postives = 189/300 (63.00%), Query Frame = 0 Query: 94 ISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW---SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIG-FGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFL 389 ++ IL+ L GYD+++RP +G +P + +M + S+GPV+ +++D +F Q W D RL++N+T ++ L +N + KIW PDTFF N K++ H +T PNR +RI DGR+ Y+ RLTI A CQ+ L FP+D CPLE S+G+ +EI+Y+W SV+ L Q++ + + T S + + ++F R+ G++ +Q YIP TLIV+ SWV+FW+ K A +PARTSLG ++VL++ T+ KS P+V Y TA+D+F+ +CF+ VF+ALVE+ L++ Sbjct: 65 VTVILNNLLE-GYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNST-IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA----VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|120785|sp|P21548.1|GBRG2_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor) HSP 1 Score: 238.81 bits (608), Expect = 1.087e-71 Identity = 125/339 (36.87%), Postives = 199/339 (58.70%), Query Frame = 0 Query: 62 WGLILSSLNRTKRTASSPSFQPFRNEREL-------SKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW---SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIG-FGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFL 389 W L+ SL + ++ + + + ++ IL+ L GYD+++RP +G +P + +M + S+GPV+ +++D +F Q W D RL++N+T ++ L +N + KIW PDTFF N K++ H +T PNR +RI DGR+ Y+ RLTI A CQ+ L FP+D CPLE S+G+ +EIIY+W SV+ L Q++ + T S + + ++F R+ G++ +Q YIP TLIV+ SWV+FW+ K A +PARTSLG ++VL++ T+ KS P+V Y TA+D+F+ +CF+ VF+ALVE+ L++ Sbjct: 26 WALVFLSLIQCSTQKGDDDYEDYTSNKTWVLTPKVHESDVTLILNGLLE-GYDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNST-IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA----VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|75061993|sp|Q5REA1.1|GBRG2_PONAB (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor >gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor) HSP 1 Score: 238.424 bits (607), Expect = 1.196e-71 Identity = 120/300 (40.00%), Postives = 189/300 (63.00%), Query Frame = 0 Query: 94 ISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW---SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIG-FGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFL 389 ++ IL+ L GYD+++RP +G +P + +M + S+GPV+ +++D +F Q W D RL++N+T ++ L +N + KIW PDTFF N K++ H +T PNR +RI DGR+ Y+ RLTI A CQ+ L FP+D CPLE S+G+ +EI+Y+W SV+ L Q++ + + T S + + ++F R+ G++ +Q YIP TLIV+ SWV+FW+ K A +PARTSLG ++VL++ T+ KS P+V Y TA+D+F+ +CF+ VF+ALVE+ L++ Sbjct: 66 VTVILNNLLE-GYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNST-IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA----VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 359
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|20141351|sp|P22723.3|GBRG2_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2; AltName: Full=GABA(A) receptor subunit gamma-2; Flags: Precursor) HSP 1 Score: 238.81 bits (608), Expect = 1.273e-71 Identity = 120/300 (40.00%), Postives = 189/300 (63.00%), Query Frame = 0 Query: 94 ISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW---SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIG-FGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFL 389 ++ IL+ L GYD+++RP +G +P + +M + S+GPV+ +++D +F Q W D RL++N+T ++ L +N + KIW PDTFF N K++ H +T PNR +RI DGR+ Y+ RLTI A CQ+ L FP+D CPLE S+G+ +EI+Y+W SV+ L Q++ + + T S + + ++F R+ G++ +Q YIP TLIV+ SWV+FW+ K A +PARTSLG ++VL++ T+ KS P+V Y TA+D+F+ +CF+ VF+ALVE+ L++ Sbjct: 65 VTVILNNLLE-GYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNST-IKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA----VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYF 358
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|232127|sp|P30191.1|GBRA6_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 237.654 bits (605), Expect = 1.744e-71 Identity = 122/308 (39.61%), Postives = 184/308 (59.74%), Query Frame = 0 Query: 91 SKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQL-----GLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTL 392 S+ +S ILD L GYD+++RP G EV+ ++ + S GPV + + ++MD +FRQ WTD RL++ L +N ++KIW PDTFF NGK+S H MT PN+ R+ +G I Y+ RLTI A C M L FP+D CPL+ GS+ + EIIY W PL ++ L QY+LI T + ++ + ++F +R+ G++++QIY P + V+ S V+FW+ K + +PART G ++VL++ T+ + S P+V YATA+D FI +CF VF+AL+EFA +N+ L Sbjct: 29 SENVSRILDNLLE-GYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|3023835|sp|Q90845.1|GBRA6_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 238.039 bits (606), Expect = 2.053e-71 Identity = 123/308 (39.94%), Postives = 185/308 (60.06%), Query Frame = 0 Query: 91 SKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQL-----GLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTL 392 S+ I+ ILD L + GYD+++RP G EV+ ++ + S GPV + + ++MD +FRQ WTD RL++ L +N ++KIW PDTFF NGK+S H MT PN+ RI +G I Y+ RLTI A C M L FP+D CPL+ GS+ + EIIY W PL ++ L QY+LI T + ++ + ++F +R+ G++++QIY P + V+ S V+FW+ K + +PART G ++VL++ T+ + S P+V YATA+D FI +CF VF+AL+EFA +N+ L Sbjct: 29 SENITRILDKLLD-GYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPT-EILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
BLAST of gaba-gated ion partial vs. SwissProt
Match: gi|341941084|sp|P16305.3|GBRA6_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 237.269 bits (604), Expect = 2.868e-71 Identity = 122/308 (39.61%), Postives = 184/308 (59.74%), Query Frame = 0 Query: 91 SKQISSILDTLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQL-----GLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTL 392 S+ +S ILD L GYD+++RP G EV+ ++ + S GPV + + ++MD +FRQ WTD RL++ L +N ++KIW PDTFF NGK+S H MT PN+ R+ +G I Y+ RLTI A C M L FP+D CPL+ GS+ + EIIY W PL ++ L QY+LI T + ++ + ++F +R+ G++++QIY P + V+ S V+FW+ K + +PART G ++VL++ T+ + S P+V YATA+D FI +CF VF+AL+EFA +N+ L Sbjct: 29 SENVSRILDNLLE-GYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPA-EILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
BLAST of gaba-gated ion partial vs. nr
Match: gi|1009552478|ref|XP_015911721.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X4 [Parasteatoda tepidariorum]) HSP 1 Score: 315.464 bits (807), Expect = 1.514e-98 Identity = 157/324 (48.46%), Postives = 224/324 (69.14%), Query Frame = 0 Query: 85 RNERELSK--QISSILDTLFNS-GYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQLGLAQYNLINW-----THGTYNG-MDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 RN ELSK +S+LD+L + YD +IRP G VE ++ IRS GP+ E ++++SMDCYFRQ W D RLR+ + EL +NW+FL K+W PDTFFFNGK SYLHK+TVPN+FIR+ PDG++ YS RLT+KA C M LRK+PLDTQ CPLEIGS+ + + ++ Y W LS D + L+QY +N T+ G +D R V +++HF R+ G+++LQIY P +IV SWV+FW+ + S+ R ++GA++VL++VT+GFGG+++ +VG ATA+D F+I+CF VFAALVE+AF+N++D ++ +K Sbjct: 3 RNSNELSKLSNTTSLLDSLLSEDKYDRRIRPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTAAQ-EELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIWKNVSLSEDVV-LSQYEFVNISIISRTNTVRVGDREDQRTV--LVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINR----SDAAGRVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYIDNYEKQQIKK 318
BLAST of gaba-gated ion partial vs. nr
Match: gi|1009552475|ref|XP_015911720.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3 [Parasteatoda tepidariorum]) HSP 1 Score: 311.997 bits (798), Expect = 4.319e-97 Identity = 157/329 (47.72%), Postives = 225/329 (68.39%), Query Frame = 0 Query: 80 SFQPFRNERELSK--QISSILDTLFNS-GYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQLGLAQYNLINW-----THGTYNG-MDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 +F F ELSK +S+LD+L + YD +IRP G VE ++ IRS GP+ E ++++SMDCYFRQ W D RLR+ + EL +NW+FL K+W PDTFFFNGK SYLHK+TVPN+FIR+ PDG++ YS RLT+KA C M LRK+PLDTQ CPLEIGS+ + + ++ Y W LS D + L+QY +N T+ G +D R V +++HF R+ G+++LQIY P +IV SWV+FW+ + S+ R ++GA++VL++VT+GFGG+++ +VG ATA+D F+I+CF VFAALVE+AF+N++D ++ +K Sbjct: 41 AFISFGQCNELSKLSNTTSLLDSLLSEDKYDRRIRPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTAAQ-EELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIWKNVSLSEDVV-LSQYEFVNISIISRTNTVRVGDREDQRTV--LVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINR----SDAAGRVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYIDNYEKQQIKK 361
BLAST of gaba-gated ion partial vs. nr
Match: gi|1009552470|ref|XP_015911718.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Parasteatoda tepidariorum] >gi|1009552473|ref|XP_015911719.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 312.768 bits (800), Expect = 7.447e-97 Identity = 157/329 (47.72%), Postives = 225/329 (68.39%), Query Frame = 0 Query: 80 SFQPFRNERELSK--QISSILDTLFNS-GYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQLGLAQYNLINW-----THGTYNG-MDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 +F F ELSK +S+LD+L + YD +IRP G VE ++ IRS GP+ E ++++SMDCYFRQ W D RLR+ + EL +NW+FL K+W PDTFFFNGK SYLHK+TVPN+FIR+ PDG++ YS RLT+KA C M LRK+PLDTQ CPLEIGS+ + + ++ Y W LS D + L+QY +N T+ G +D R V +++HF R+ G+++LQIY P +IV SWV+FW+ + S+ R ++GA++VL++VT+GFGG+++ +VG ATA+D F+I+CF VFAALVE+AF+N++D ++ +K Sbjct: 41 AFISFGQCNELSKLSNTTSLLDSLLSEDKYDRRIRPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTAAQ-EELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIWKNVSLSEDVV-LSQYEFVNISIISRTNTVRVGDREDQRTV--LVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINR----SDAAGRVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYIDNYEKQQIKK 361
BLAST of gaba-gated ion partial vs. nr
Match: gi|1228384942|ref|XP_021954081.1| (gamma-aminobutyric acid receptor alpha-like isoform X2 [Folsomia candida]) HSP 1 Score: 305.449 bits (781), Expect = 3.677e-96 Identity = 143/278 (51.44%), Postives = 204/278 (73.38%), Query Frame = 0 Query: 125 MAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTR--LRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWS---VKPLSMDQ-LGLAQYNLINWTHGTYNGMDDSR-NVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVR 394 M I+SMGPV E + +SMDCYFRQ W D RL++N ++ L+E MNW FL ++W+PDT+F NGKRSYLH +TVPN+F+R+ DG+++YS RLT+KA+C M LRKFPLD+Q CPLEIGS+G+ +++Y W+ P+ + + LAQY+L++ T M R N S V +HF +R +G+++LQ+Y+P TLIV CSWV+FW+ A +PAR SLG ++VLS+ T+GFGG+S+ P+ YATALD F+ILCF VFA++VE+A +NF+D +++ Sbjct: 1 MYIKSMGPVSETDETYSMDCYFRQIWVDNRLKFNRSQGGLKEFSMNWLFLERVWKPDTYFVNGKRSYLHSITVPNKFLRLRDDGKLTYSMRLTVKAKCPMHLRKFPLDSQSCPLEIGSYGYGDLDVLYAWAPGKSPPVQTEAGVNLAQYDLVDITTKEEIRMSSRRDNFSVVTVHFNLKRHTGYFMLQVYVPCTLIVSCSWVSFWIDPQA----VPARVSLGVTTVLSMTTLGFGGRSQMPRTSYATALDWFVILCFAFVFASMVEYAAINFMDKMMK 274
BLAST of gaba-gated ion partial vs. nr
Match: gi|1227956253|ref|XP_021915684.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 304.294 bits (778), Expect = 9.898e-94 Identity = 157/324 (48.46%), Postives = 223/324 (68.83%), Query Frame = 0 Query: 84 FRNERELSKQISSILDTLFN-SGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWS-VKPLSMDQ-LGLAQYNLINWTHGTYNGMDDSRNVSKVL-LHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKD 402 ++ R LSK I+S LD L N S YD +IRP G P+ V VNM I+SMG V E Q + MDCYFRQ+W D RL +N L E ++W FL+++W+PDTFF NGK+S+LH++TVPN+F+R+ DG + YS RLTIKA C M LRKFPLD+Q CPL IGS+G+ +D+I+Y+W +P+ +++ + L+QY L+N+T +V VL F R G++VLQ+Y+P LIV CSWV+FW+ A +PAR LG ++VL++ T+GFGG+++ P+V YATALD F+I+CF VFA ++E+A +NF D + +K+ +D Sbjct: 26 LKDYRFLSKNITSTLDQLLNRSRYDKRIRPDFGGPPVTVRVNMHIKSMGAVSETDQEYVMDCYFRQFWYDRRLVFNFPGLDEFSLSWLFLDRVWKPDTFFLNGKKSHLHRITVPNKFLRLRKDGFLMYSMRLTIKASCPMHLRKFPLDSQSCPLLIGSYGYRSDDIVYEWDRERPVVVEENVELSQYRLVNYTTDHVPKFIRGVDVYSVLKTEFHLRRNIGYFVLQLYVPCGLIVSCSWVSFWIDPAA----VPARVQLGVTTVLTMTTMGFGGRAQMPRVSYATALDSFVIICFSFVFAVMIEYAVINFFDKIAGDMKKLLQD 345
BLAST of gaba-gated ion partial vs. nr
Match: gi|508083115|gb|AGN03794.1| (putative GABA-gated ion channel, partial [Ixodes scapularis]) HSP 1 Score: 301.212 bits (770), Expect = 2.555e-93 Identity = 149/300 (49.67%), Postives = 207/300 (69.00%), Query Frame = 0 Query: 106 YDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW-SVKPLSMDQ-LGLAQYNLINWTHG---TYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGK-SKPQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRK 399 Y+ Q RP G P E+ ++ IRS GPV E + +FSMDCYFRQ W D RLR++ ++ L ++WQFL K+W PDT+FFNGK SYLHK+TVPN+F+R+ DGR+ YS RLTIKA C M LRK+PLDTQ CPLEIGSF + + E+++KW KP+ + + L+QY +N T TY + R S ++ F R+ G+++LQIY P +LIV SWV FW+ + S+ R S+GA++VL++VT+GFGG+ S P+V YATALD F+I+CF VF ALVE+A +N+L+ + +R+ Sbjct: 39 YNRQFRPGFGGPPTEILTDVLIRSFGPVSENEMMFSMDCYFRQTWYDRRLRFDGD-IKLLSVSWQFLEKVWTPDTYFFNGKSSYLHKVTVPNKFVRLRHDGRLKYSMRLTIKASCPMHLRKYPLDTQACPLEIGSFAYSSKEVVFKWKGPKPVDISSDVTLSQYEFLNITVANLTTYGPAGEVR--SSLMARFILSRRRGYFILQIYAPCSLIVGASWVAFWINR----SDAAGRVSVGATTVLTLVTMGFGGRASLPRVDYATALDWFVIMCFTFVFTALVEYACVNYLERFLMHRQRQ 331
BLAST of gaba-gated ion partial vs. nr
Match: gi|1227956239|ref|XP_021915628.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|1227956241|ref|XP_021915636.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|1227956243|ref|XP_021915645.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|1227956245|ref|XP_021915651.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|1227956247|ref|XP_021915662.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|1227956249|ref|XP_021915667.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Zootermopsis nevadensis] >gi|646723763|gb|KDR24265.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Zootermopsis nevadensis]) HSP 1 Score: 304.294 bits (778), Expect = 1.046e-92 Identity = 157/324 (48.46%), Postives = 223/324 (68.83%), Query Frame = 0 Query: 84 FRNERELSKQISSILDTLFN-SGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWS-VKPLSMDQ-LGLAQYNLINWTHGTYNGMDDSRNVSKVL-LHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRLKRKDKD 402 ++ R LSK I+S LD L N S YD +IRP G P+ V VNM I+SMG V E Q + MDCYFRQ+W D RL +N L E ++W FL+++W+PDTFF NGK+S+LH++TVPN+F+R+ DG + YS RLTIKA C M LRKFPLD+Q CPL IGS+G+ +D+I+Y+W +P+ +++ + L+QY L+N+T +V VL F R G++VLQ+Y+P LIV CSWV+FW+ A +PAR LG ++VL++ T+GFGG+++ P+V YATALD F+I+CF VFA ++E+A +NF D + +K+ +D Sbjct: 26 LKDYRFLSKNITSTLDQLLNRSRYDKRIRPDFGGPPVTVRVNMHIKSMGAVSETDQEYVMDCYFRQFWYDRRLVFNFPGLDEFSLSWLFLDRVWKPDTFFLNGKKSHLHRITVPNKFLRLRKDGFLMYSMRLTIKASCPMHLRKFPLDSQSCPLLIGSYGYRSDDIVYEWDRERPVVVEENVELSQYRLVNYTTDHVPKFIRGVDVYSVLKTEFHLRRNIGYFVLQLYVPCGLIVSCSWVSFWIDPAA----VPARVQLGVTTVLTMTTMGFGGRAQMPRVSYATALDSFVIICFSFVFAVMIEYAVINFFDKIAGDMKKLLQD 345
BLAST of gaba-gated ion partial vs. nr
Match: gi|939269529|ref|XP_014254948.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Cimex lectularius]) HSP 1 Score: 298.901 bits (764), Expect = 7.624e-92 Identity = 142/322 (44.10%), Postives = 218/322 (67.70%), Query Frame = 0 Query: 86 NERELSKQISSILD-TLFNSGYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMD-QLGLAQYNLINW-THG-------TYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLDTLVRRL 396 +E + ++ L+ L + YD +IRP G P V VNM I+S+GPV E +++MD YFRQ W D RL++ + EL M+W FL KIW+PDT+F NGK+S+LH++T PN+F+R+ DG ++YS RLT+ A C+M L+KFPLD+Q CPL IGS+G+ + +++Y WS + ++ + +AQY ++N T+G T + ++++ S V +F +R G+YVLQIY+P TLIV CSW++FW+ S++ RTSL ++VLS+ T+GFGG+S+ P+VG+ATALD ++I+CF FA ++E+A +NF D L + + Sbjct: 22 GSKEFTNNVTDTLNGLLLANNYDKKIRPDFGGPPTLVTVNMHIKSLGPVVEDAAMYTMDVYFRQSWYDRRLKFTLPGISELSMSWLFLEKIWKPDTYFLNGKKSHLHRITSPNKFVRMRHDGHLTYSMRLTLSATCKMHLKKFPLDSQVCPLVIGSYGYTSKDMVYSWSGSGVGLEPGVEMAQYLIVNISTNGHVFAVRSTGSKVNNTEIYSVVQAYFFLKRSIGYYVLQIYVPCTLIVCCSWISFWITP----SDVAGRTSLAVTTVLSITTLGFGGRSQLPKVGHATALDWYVIICFAFAFAVMIEYAVINFTDKLAKDI 339
BLAST of gaba-gated ion partial vs. nr
Match: gi|1009592987|ref|XP_015925419.1| (gamma-aminobutyric acid receptor alpha-like [Parasteatoda tepidariorum]) HSP 1 Score: 292.738 bits (748), Expect = 1.516e-90 Identity = 138/300 (46.00%), Postives = 204/300 (68.00%), Query Frame = 0 Query: 95 SSILDTLFNS-GYDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNTRLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKW--SVKPLSMDQLGLAQYNLINWTHGTYNGMDDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLD 390 S +L++L ++ YD QIRP G P ++ ++ IRS G + E +FS+DCYFRQ W D RL++ + L L M+W+FL +IW PDT+F NGK SYLHK++ PN+F+R+ DG++ YS RLTI+ C M LRK+PLD Q CPL IGSF + ++++ Y+W + D + L+QY+ +N T + + R S +L F +R+ G+++LQIY P +IV SWV+FW+ K S+ P R ++GA++VL++VT+GFGG+S P+V YATA+D F+ILCF VFAA+VE+A +N +D Sbjct: 5 SKLLESLLSAENYDKQIRPGFGGSPTVIDTDIEIRSFGSISETDMLFSIDCYFRQTWFDTRLKFRSGNLTVLSMDWKFLQRIWTPDTYFLNGKSSYLHKVSAPNKFVRVRNDGQLKYSMRLTIQTNCPMHLRKYPLDKQACPLVIGSFAYTSNDVRYQWRGETPVIVADDVTLSQYDYLNITLANHTEV-KPRGTSSLLARFILKRRRGYFILQIYAPCAMIVGASWVSFWINK----SDAPGRVAVGATTVLTLVTMGFGGRSSLPRVAYATAIDWFVILCFSFVFAAMVEYACVNVVD 299
BLAST of gaba-gated ion partial vs. nr
Match: gi|242021132|ref|XP_002431000.1| (gamma-aminobutyric-acid receptor alpha-2 subunit precursor, putative [Pediculus humanus corporis] >gi|212516224|gb|EEB18262.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor, putative [Pediculus humanus corporis]) HSP 1 Score: 295.434 bits (755), Expect = 7.989e-90 Identity = 142/307 (46.25%), Postives = 208/307 (67.75%), Query Frame = 0 Query: 90 LSKQISSILDTLFNSG-YDHQIRPRVGSQPLEVEVNMAIRSMGPVDEQKQIFSMDCYFRQYWTDFRLRYNNT-RLRELPMNWQFLNKIWRPDTFFFNGKRSYLHKMTVPNRFIRIAPDGRISYSQRLTIKARCQMDLRKFPLDTQDCPLEIGSFGHDADEIIYKWSVKPLSMDQLG--LAQYNLINWTHGTYNGM-DDSRNVSKVLLHFKFERQSGFYVLQIYIPLTLIVMCSWVTFWLRKTAKGSEIPARTSLGASSVLSVVTIGFGGKSK-PQVGYATALDVFIILCFLEVFAALVEFAFLNFLD 390 +S ++ LD L S YD ++RP G P+ + VN I+SMGPV + + F +DCYFRQ+W D+RL+Y L E M+W FL+++W+PDT+F NGK+SYLH++TVPN+F+R+ DG I+YS RLTI A C M LRKFPLD Q CPL +GS+G+ ++IYKW+ + Q G +AQ++L+N T M S + F +R +G+++LQ+YIP LIV+CSW++FW+ A +PAR +LG ++VLS+ T+GFGG+S+ P+V Y TALD F+I+CF VF+ ++E+A +N+ D Sbjct: 26 VSSNVTETLDFLLGSKRYDKRLRPGYGGPPITISVNFFIKSMGPVSDNDESFGLDCYFRQHWYDWRLQYQKIPGLDEFSMSWLFLDRVWKPDTYFVNGKKSYLHRITVPNKFLRLRHDGFITYSMRLTISASCPMYLRKFPLDLQKCPLVLGSYGYTDKDLIYKWTDEDAIGMQEGVEIAQFDLVNVTTQKSTTMVKGGLPYSTIKADFWLKRHTGYFMLQVYIPCGLIVVCSWISFWIDPDA----VPARVNLGVTTVLSLTTLGFGGRSQMPKVSYWTALDWFVIICFTSVFSVMIEYAIVNYKD 328 The following BLAST results are available for this feature:
BLAST of gaba-gated ion partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of gaba-gated ion partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of gaba-gated ion partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold691_size110934:39185..40964+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold691_size110934-processed-gene-0.2 ID=snap_masked-scaffold691_size110934-processed-gene-0.2|Name=gaba-gated ion partial|organism=Tigriopus kingsejongensis|type=gene|length=1780bp|location=Sequence derived from alignment at scaffold691_size110934:39185..40964+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'gaba-gated ion partial' has the following synonyms
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