ras-related protein rab-5c, snap_masked-scaffold71_size417697-processed-gene-3.3 (gene) Tigriopus kingsejongensis

Overview


Name	ras-related protein rab-5c
Unique Name	snap_masked-scaffold71_size417697-processed-gene-3.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000011581 (supercontig:LSalAtl2s:LSalAtl2s800:196338:197338:-1 gene:EMLSAG00000011581 transcript:EMLSAT00000011581 description:"maker-LSalAtl2s800-augustus-gene-2.36")

HSP 1 Score: 122.094 bits (305), Expect = 5.323e-35
Identity = 66/164 (40.24%), Postives = 100/164 (60.98%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARA----DIVIALAGNKSDLAQKRLVEYEEANAYAE-ENGLLFMETSAKNANNVNEIFLAIAR 180
             K+++LG+S VGK+SL+ ++V  +F    ++TIGA FLT+ + +DD  V  +IWDTAGQER+ SL   +YRGA   ++ YD+T+ +TF   ++W  E   QA      +    + GNK DL + R V  + A  +   +N + + ETSAK A NV + FL IA+
Sbjct:    9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDANTFQSLESWRDEFLIQASPSDLDNFPFVVLGNKVDL-ENRAVSSKRAQQWCHSKNEVPYFETSAKEAINVEQAFLTIAK 171

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000005111 (supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1 gene:EMLSAG00000005111 transcript:EMLSAT00000005111 description:"augustus_masked-LSalAtl2s26-processed-gene-8.9")

HSP 1 Score: 117.087 bits (292), Expect = 1.556e-32
Identity = 68/208 (32.69%), Postives = 110/208 (52.88%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHS--------------------------------LAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVI-ALAGNKSD-LAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGAS 195
            FKL+++G+S VGKSSL+LRF    F     +TIG  F  +TL ++   VK +IWDTAGQER+ +                                +   YYRG    IVVYD++N ++F   K W+ E+ +   +++V   L GNK+D    K++V  E+A  ++++ G+   ETSAK   NV E+F ++   + + ++ A+ + +S
Sbjct:   10 FKLLIIGDSGVGKSSLLLRFADNSFTGNYITTIGVDFKIRTLEVNGERVKLQIWDTAGQERFRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITATYYRGTHGVIVVYDVSNGESFANVKRWLHEIDQNCSSEVVSRXLVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLFETSAKENFNVEEMFKSLTELVLKSKKEAALSESS 217

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000003441 (supercontig:LSalAtl2s:LSalAtl2s188:620675:622456:-1 gene:EMLSAG00000003441 transcript:EMLSAT00000003441 description:"maker-LSalAtl2s188-augustus-gene-6.40")

HSP 1 Score: 117.087 bits (292), Expect = 2.605e-32
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 0

Query:   53 TIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANG 208
            TIG  F T+ +      +K +IWDTAGQER+ ++   YYRGA  AI+VYD+T + T+    +W+ + +     + VI L GNK DL  +R V +EEA  +AEENGL+F+E SAK   +V + FL  A+++    +  S    +    V   G  NG
Sbjct:   91 TIGVEFGTRIIEXSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGAILVYDVTRRHTYNHLSSWLTDARNLTNPNTVIFLIGNKCDLEGQRDVSHEEARQFAEENGLMFVEASAKTGQHVEDAFLETAKKVYHNVQDGSLDLNAAESGVQHKGSLNG 246

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000004744 (supercontig:LSalAtl2s:LSalAtl2s24:1428257:1431103:1 gene:EMLSAG00000004744 transcript:EMLSAT00000004744 description:"maker-LSalAtl2s24-augustus-gene-13.27")

HSP 1 Score: 114.775 bits (286), Expect = 3.209e-32
Identity = 58/160 (36.25%), Postives = 89/160 (55.62%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQ 181
            +KLVL+G+S VGK  L+ + +         STIG    T  +      +K ++WDT GQERY  +    YR A  AI+V+DITN  +F     W+ E+   +   +   L GNK+DL+++R V  EEA  +A +  + ++ETSA  + NV + F+A+  Q
Sbjct:   39 YKLVLVGDSGVGKXCLLEKLIDSSSKNTFISTIGFVIRTHVIVHQQNHLKLQVWDTGGQERYRPVLAXCYRNASGAIIVFDITNPTSFLNLSQWLDEISEFSEEPLPKILVGNKADLSERRRVSKEEAQNFANKWKMAYIETSALESTNVKQAFIALILQ 198

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000006497 (supercontig:LSalAtl2s:LSalAtl2s356:427912:429520:-1 gene:EMLSAG00000006497 transcript:EMLSAT00000006497 description:"maker-LSalAtl2s356-snap-gene-4.11")

HSP 1 Score: 113.235 bits (282), Expect = 3.034e-31
Identity = 65/194 (33.51%), Postives = 106/194 (54.64%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERY-HSLAPMYYRGAQAAIVVYDITNQDTFTRAKN-WVKELQRQARAD---IVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKN---ANNVNEIFLAIARQLPRERETA-------SATGASGGVRV 200
            FK+++LG++ VGK+ L  RF  G F +  +STIG  F  + L +D   ++ ++WDTAGQER+  S+   YYR A A + VYDI  +++FT   + W+ E + Q        ++ L    +D+ +   V    A  YA+E G+   ETSAK+   +++V+ +F+ +A +L   R  A       S    +G VR+
Sbjct:   15 FKVIVLGDAGVGKTCLTFRFCSGSFPDGVDSTIGVDFREKNLTVDGEDIRLQLWDTAGQERFRRSMISHYYRNANAVVFVYDINCKNSFTPGLDKWIAECEAQGLTPSKIPMVVLGMFFADIQKSGCVPTLVAQRYADERGMPHFETSAKDDSKSDHVDAVFMTLAHKLKHYRSGAMFLNSNSSPEKGTGSVRI 208

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000008540 (supercontig:LSalAtl2s:LSalAtl2s526:8929:11380:1 gene:EMLSAG00000008540 transcript:EMLSAT00000008540 description:"maker-LSalAtl2s526-augustus-gene-0.20")

HSP 1 Score: 106.686 bits (265), Expect = 4.830e-27
Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDD-TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLA-QKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL--PRERETASA 191
            FK+V +G+S VGK+SL+ RF  G F+    ST+G  + T+ + +D+   V  ++WDTAGQERY S+   Y+R   A ++VYDI+ + +F   ++W+ + +  A  + +I L GNK DL    R V+  E    + +   LF E SA N  +V      + + L    +RE   A
Sbjct:  375 FKVVFVGDSTVGKTSLINRFCTGCFYPNTISTVGVDYRTRNVLVDNKDNVCIQVWDTAGQERYRSITRQYFRKTDAVVIVYDISEEKSFINVRSWLHDAREGAGKEXIIVLLGNKVDLEIHSRKVQTLEGLQLSCQFDTLFHEVSALNGIHVEHALTQMVKLLLQKEDREIQKA 548

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000001769 (supercontig:LSalAtl2s:LSalAtl2s12:81506:89483:-1 gene:EMLSAG00000001769 transcript:EMLSAT00000001769 description:"maker-LSalAtl2s12-augustus-gene-0.10")

HSP 1 Score: 105.531 bits (262), Expect = 7.527e-27
Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = 0

Query:    8 SGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL 182
            +GA   GA   +  FKLVL+G+   GK++ V R + G+F +   +T+G              ++F +WDTAGQE++  L   YY   Q AI+++D+T++ T+    NW ++L R    +I I L GNK D+  +++    +A  +  +  L + + SAK+  N  + FL +AR+L
Sbjct:   11 NGAQPGGAEQEIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTSRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLTGNKVDIKDRKV--KAKAIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 182

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000004714 (supercontig:LSalAtl2s:LSalAtl2s248:219542:223971:-1 gene:EMLSAG00000004714 transcript:EMLSAT00000004714 description:"maker-LSalAtl2s248-augustus-gene-2.18")

HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-26
Identity = 53/164 (32.32%), Postives = 96/164 (58.54%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARAD-IVIALAGNKSDLAQ--KRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL 182
            +++V LG+  VGKS+L L++V+  F ++ + TI  A+  +T+ +D+     +I DTAGQE + ++   Y RG +  ++ Y I+++ ++  A+ + K + R    D + + L  NK DL    KR V  EE NA A++ G  F+ETSA     ++++F  + R++
Sbjct:   10 YRIVXLGDGGVGKSALTLQYVQHNFIDYHDPTIEDAYQQRTV-IDNEPCVLDILDTAGQEEFTTMREQYMRGGEGFVLCYSISDRHSYLEAQEYRKLILRVRDEDSVPMILVANKVDLEVYGKRKVSPEEGNALADKFGCPFIETSAAQRRRIDDVFHTLVREI 172

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000011406 (supercontig:LSalAtl2s:LSalAtl2s788:405251:405915:-1 gene:EMLSAG00000011406 transcript:EMLSAT00000011406 description:"maker-LSalAtl2s788-augustus-gene-3.37")

HSP 1 Score: 98.5969 bits (244), Expect = 5.992e-26
Identity = 50/165 (30.30%), Postives = 94/165 (56.97%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQ---ARADIV-----------IALAGNKSDLAQKRLVEYEEANAYAEENGLL-FMETSAKNANNV 171
             K++ LG+  VGKSSL+ R+V   +H     ++  ++  +++ + D  +  ++WD  G ER+  +  +YY+ A  A++V+D++  +TF  A +W+ ++  +   +RADI            I L  NK DL   ++  Y + ++Y +ENGLL + ETSA++ ++V
Sbjct:   15 LKILFLGDLGVGKSSLIRRYVDNDYHSDYRVSVDCSYRLKSVQVKDKRINMQLWDVPGHERFGGMTKVYYKYAHGAVIVFDLSRSETFDSALSWLSDVTEKLFDSRADITDGDEEPNKVMPIILMANKCDLPDIKVPRY-KYSSYVQENGLLSWFETSARDESSV 178

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000003586 (supercontig:LSalAtl2s:LSalAtl2s196:357106:357710:-1 gene:EMLSAG00000003586 transcript:EMLSAT00000003586 description:"augustus_masked-LSalAtl2s196-processed-gene-3.1")

HSP 1 Score: 97.8265 bits (242), Expect = 7.583e-26
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 0

Query:   19 MSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQR-QARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL 182
            M +FK+V+LG    GKS+L ++FV G F E  + TI   F  + + +D T    EI DTAG E++ S+  +Y +  Q  +V Y +TN  TF   K    ++ R +    + I L GNK DL  +R V   E  A A+  G  F+E+SAKN  NVNE+F  I R++
Sbjct:    1 MREFKVVVLGSGGXGKSALXVQFVTGHFMEKYDPTI-EDFYRKEIEVDSTPCVLEILDTAGTEQFASMRDLYIKNGQGFVVTYSLTNHQTFQDIKTMKDQITRVKGTERVPILLVGNKVDLESQREVPTVEGMALAQIWGCSFVESSAKNRMNVNEVFAEIVREM 164

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|38258923|sp|P51148.2|RAB5C_HUMAN (RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880; AltName: Full=RAB5L >gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 322.013 bits (824), Expect = 6.205e-112
Identity = 161/213 (75.59%), Postives = 176/213 (82.63%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +ATGA G  R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNATGAPGRNR-GVDLQENNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 321.627 bits (823), Expect = 1.038e-111
Identity = 161/213 (75.59%), Postives = 175/213 (82.16%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYAE+N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRNR-GVDLQENNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|38258917|sp|P35278.2|RAB5C_MOUSE (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 319.701 bits (818), Expect = 5.430e-111
Identity = 159/213 (74.65%), Postives = 175/213 (82.16%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q +       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRTR-GVDLQESNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|1710027|sp|P51147.1|RAB5C_CANFA (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 318.546 bits (815), Expect = 1.589e-110
Identity = 159/213 (74.65%), Postives = 174/213 (81.69%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA    R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPSRNR-GVDLQENSPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK (RecName: Full=Ras-related protein Rab-5B)

HSP 1 Score: 313.923 bits (803), Expect = 8.275e-109
Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0

Query:   16 ANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            A+++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ++CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ+TF RAK WVKELQRQA   IVIALAGNK+DLA KR+VEYEEA AYA++N LLFMETSAK A NVN++FLAIA++LP+  E  S +GA+G  R G D           CC
Sbjct:   15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS-EPQSTSGAAGRSR-GVDLHEQTQQNKSQCC 213

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|82246551|sp|Q98932.1|RAB5C_CHICK (RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like protein)

HSP 1 Score: 311.612 bits (797), Expect = 7.494e-108
Identity = 155/213 (72.77%), Postives = 173/213 (81.22%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR V++++A  YA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A G  G  RV  D Q +       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAPGGPGRNRV-VDLQESSQPSRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|46577637|sp|P61020.1|RAB5B_HUMAN (RecName: Full=Ras-related protein Rab-5B >gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B >gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B)

HSP 1 Score: 310.071 bits (793), Expect = 3.073e-107
Identity = 151/201 (75.12%), Postives = 169/201 (84.08%), Query Frame = 0

Query:   16 ANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            A+++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ++CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ+TF RAK WVKELQRQA   IVIALAGNK+DLA KR+VEYEEA AYA++N LLFMETSAK A NVN++FLAIA++LP+  E  +  GA+G  R G D           CC
Sbjct:   15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS-EPQNLGGAAGRSR-GVDLHEQSQQNKSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|1346958|sp|P20339.2|RAB5A_HUMAN (RecName: Full=Ras-related protein Rab-5A)

HSP 1 Score: 303.523 bits (776), Expect = 1.189e-104
Identity = 150/216 (69.44%), Postives = 171/216 (79.17%), Query Frame = 0

Query:    2 SSGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            S G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK + NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    3 SRGATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPTQPTRNQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|704043945|sp|M0RC99.1|RAB5A_RAT (RecName: Full=Ras-related protein Rab-5A; AltName: Full=Small GTP-binding protein rab5)

HSP 1 Score: 303.523 bits (776), Expect = 1.386e-104
Identity = 149/214 (69.63%), Postives = 170/214 (79.44%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F+RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK   NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    5 GATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPAQPARSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE (RecName: Full=Ras-related protein Rab-5A)

HSP 1 Score: 302.753 bits (774), Expect = 2.531e-104
Identity = 149/214 (69.63%), Postives = 170/214 (79.44%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK + NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    5 GATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPAQPARSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|669193531|gb|AII16471.1| (Ras-related protein Rab-5c, partial [Paracyclopina nana])

HSP 1 Score: 330.487 bits (846), Expect = 9.001e-113
Identity = 162/199 (81.41%), Postives = 177/199 (88.94%), Query Frame = 0

Query:   18 RMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            R++QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+ LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTFTRAK+WV+ELQRQAR DIVIALAGNKSDL   R VEYEEANAYAEENGLLF+ETSAK+ANNVNEIFLAIAR+LPR+++ AS+   + G R+   G    G K+G CC
Sbjct:   15 RIAQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVVLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNADTFTRAKSWVRELQRQARPDIVIALAGNKSDLGSIRSVEYEEANAYAEENGLLFLETSAKHANNVNEIFLAIARKLPRDQDQASS--GNSGRRLEETG-TESGNKMGQCC 210

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1325279233|ref|XP_023324265.1| (ras-related protein Rab-5B-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 329.717 bits (844), Expect = 1.405e-112
Identity = 162/209 (77.51%), Postives = 178/209 (85.17%), Query Frame = 0

Query:    8 SGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            SG    G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DL   R+VEY+EA+AYAEENGLLFMETSAK A NVN+IFLAIA++LP++ E A  +   GGVRV   G A  G K+G+CC
Sbjct:    3 SGQRPGGQQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNADTFERAKNWVKELQRQASPNIVIALAGNKADLTTNRIVEYDEASAYAEENGLLFMETSAKTALNVNDIFLAIAKKLPKDGEGAGPS--QGGVRV-TQGNAQEGSKMGSCC 208

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|926640559|ref|XP_013786380.1| (ras-related protein Rab-5C-like [Limulus polyphemus] >gi|926640561|ref|XP_013786381.1| ras-related protein Rab-5C-like [Limulus polyphemus])

HSP 1 Score: 329.717 bits (844), Expect = 1.417e-112
Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KRLVEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+     SA+G SG  R G D   N     G CCK
Sbjct:    5 SGAQRPNGAMQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRLVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEH--SASGVSGPGRRGVDLSENQQQSSGGCCK 214

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|762087509|ref|XP_011426046.1| (PREDICTED: ras-related protein Rab-5C [Crassostrea gigas] >gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas])

HSP 1 Score: 325.479 bits (833), Expect = 8.239e-111
Identity = 163/217 (75.12%), Postives = 177/217 (81.57%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGAD--GQANGGGKLGACCK 217
            +G  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAKNWVKELQRQA  +IVIALAGNKSDLAQKR+VEYEEA AYAEEN LLFMETSAK A NVN+IFLAIA++LP+      A    GGV + +    Q+ GG     CCK
Sbjct:    5 TGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEGGGPAPSRPGGVNLNSQQTQQSEGG-----CCK 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1238880886|ref|XP_022253472.1| (ras-related protein Rab-5C-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 324.709 bits (831), Expect = 1.802e-110
Identity = 163/215 (75.81%), Postives = 175/215 (81.40%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KR VEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+  + AS  G SG  R G D   N       CCK
Sbjct:   12 SGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRAVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQLAS--GLSGQGRRGVDLSENQQQTSSGCCK 221

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|926638429|ref|XP_013785230.1| (ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus] >gi|1238880889|ref|XP_022253473.1| ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus] >gi|1238880891|ref|XP_022253474.1| ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 323.939 bits (829), Expect = 2.696e-110
Identity = 163/215 (75.81%), Postives = 175/215 (81.40%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KR VEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+  + AS  G SG  R G D   N       CCK
Sbjct:    5 SGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRAVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQLAS--GLSGQGRRGVDLSENQQQTSSGCCK 214

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1242769869|ref|XP_022324353.1| (ras-related protein Rab-5B-like [Crassostrea virginica] >gi|1242769871|ref|XP_022324354.1| ras-related protein Rab-5B-like [Crassostrea virginica])

HSP 1 Score: 323.168 bits (827), Expect = 5.606e-110
Identity = 162/217 (74.65%), Postives = 176/217 (81.11%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGAD--GQANGGGKLGACCK 217
            +G  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAKNWVKELQRQA  +IVIALAGNKSDLAQKR+VEYEEA AYAEEN LLFMETSAK A NVN+IFLAIA++LP+           GGV + +    Q+ GG     CCK
Sbjct:    5 TGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEGGGPTPTRPGGVNLNSQQTQQSEGG-----CCK 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|961729388|ref|XP_014925091.1| (PREDICTED: ras-related protein Rab-5C [Acinonyx jubatus])

HSP 1 Score: 322.783 bits (826), Expect = 8.300e-110
Identity = 159/208 (76.44%), Postives = 173/208 (83.17%), Query Frame = 0

Query:    9 GAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  A  A N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYAE+N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q N       CC
Sbjct:    5 GPRAPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRNR-GVDLQENNPASRSQCC 210

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1285010644|ref|XP_023017322.1| (ras-related protein Rab-5B isoform X1 [Leptinotarsa decemlineata])

HSP 1 Score: 323.168 bits (827), Expect = 9.088e-110
Identity = 161/215 (74.88%), Postives = 177/215 (82.33%), Query Frame = 0

Query:    6 NRSGAAA---AGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            NR+G A         ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAK WVKELQRQA   IVIALAGNK DLA KR+VEYEEA  YA+ENGLLFMETSAK A NVN+IFLAIA++LP+  +T    G++ G R+ A+G A G    G CCK
Sbjct:   13 NRTGTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPTIVIALAGNKQDLANKRMVEYEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQTTGQGGSAQGRRL-AEGDA-GAKAPGNCCK 225

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1227955595|ref|XP_021942459.1| (ras-related protein Rab-5B isoform X1 [Zootermopsis nevadensis] >gi|646723925|gb|KDR24359.1| Ras-related protein Rab-5B [Zootermopsis nevadensis])

HSP 1 Score: 322.783 bits (826), Expect = 9.935e-110
Identity = 163/218 (74.77%), Postives = 180/218 (82.57%), Query Frame = 0

Query:    2 SSGVNRSGAAAA-GAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVR-VGADGQANGGGKLGACCK 217
            S+  NRSGA    G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAK WVKELQRQA  +IVIALAGNK+DLA KR+VEY+EA  YAEENGLLFMETSAK A NVN+IFLAIA++LP+  + A A  +  G R V ++GQ    G    CCK
Sbjct:    6 SAMANRSGAQRPNGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYDEARGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQVAGAGTSGQGRRLVESEGQQKAPGN---CCK 220

The following BLAST results are available for this feature:

BLAST of ras-related protein rab-5c vs. L. salmonis genes
BLAST of ras-related protein rab-5c vs. SwissProt
BLAST of ras-related protein rab-5c vs. nr

BLAST of ras-related protein rab-5c vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011581	5.323e-35	40.24	supercontig:LSalAtl2s:LSalAtl2s800:196338:197338:-...	[more]
EMLSAG00000005111	1.556e-32	32.69	supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1...	[more]
EMLSAG00000003441	2.605e-32	39.10	supercontig:LSalAtl2s:LSalAtl2s188:620675:622456:-...	[more]
EMLSAG00000004744	3.209e-32	36.25	supercontig:LSalAtl2s:LSalAtl2s24:1428257:1431103:...	[more]
EMLSAG00000006497	3.034e-31	33.51	supercontig:LSalAtl2s:LSalAtl2s356:427912:429520:-...	[more]
EMLSAG00000008540	4.830e-27	35.06	supercontig:LSalAtl2s:LSalAtl2s526:8929:11380:1 ge...	[more]
EMLSAG00000001769	7.527e-27	32.57	supercontig:LSalAtl2s:LSalAtl2s12:81506:89483:-1 g...	[more]
EMLSAG00000004714	1.972e-26	32.32	supercontig:LSalAtl2s:LSalAtl2s248:219542:223971:-...	[more]
EMLSAG00000011406	5.992e-26	30.30	supercontig:LSalAtl2s:LSalAtl2s788:405251:405915:-...	[more]
EMLSAG00000003586	7.583e-26	38.79	supercontig:LSalAtl2s:LSalAtl2s196:357106:357710:-...	[more]

Pages

BLAST of ras-related protein rab-5c vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|38258923\|sp\|P51148.2\|RAB5C_HUMAN	6.205e-112	75.59	RecName: Full=Ras-related protein Rab-5C; AltName:...	[more]
gi\|75052596\|sp\|Q58DS9.1\|RAB5C_BOVIN	1.038e-111	75.59	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|38258917\|sp\|P35278.2\|RAB5C_MOUSE	5.430e-111	74.65	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|1710027\|sp\|P51147.1\|RAB5C_CANFA	1.589e-110	74.65	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|75571188\|sp\|Q5ZHW4.1\|RAB5B_CHICK	8.275e-109	75.62	RecName: Full=Ras-related protein Rab-5B	[more]
gi\|82246551\|sp\|Q98932.1\|RAB5C_CHICK	7.494e-108	72.77	RecName: Full=Ras-related protein Rab-5C; AltName:...	[more]
gi\|46577637\|sp\|P61020.1\|RAB5B_HUMAN	3.073e-107	75.12	RecName: Full=Ras-related protein Rab-5B >gi\|48474...	[more]
gi\|1346958\|sp\|P20339.2\|RAB5A_HUMAN	1.189e-104	69.44	RecName: Full=Ras-related protein Rab-5A	[more]
gi\|704043945\|sp\|M0RC99.1\|RAB5A_RAT	1.386e-104	69.63	RecName: Full=Ras-related protein Rab-5A; AltName:...	[more]
gi\|32171710\|sp\|Q9CQD1.1\|RAB5A_MOUSE	2.531e-104	69.63	RecName: Full=Ras-related protein Rab-5A	[more]

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BLAST of ras-related protein rab-5c vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|669193531\|gb\|AII16471.1\|	9.001e-113	81.41	Ras-related protein Rab-5c, partial [Paracyclopina...	[more]
gi\|1325279233\|ref\|XP_023324265.1\|	1.405e-112	77.51	ras-related protein Rab-5B-like isoform X1 [Euryte...	[more]
gi\|926640559\|ref\|XP_013786380.1\|	1.417e-112	76.74	ras-related protein Rab-5C-like [Limulus polyphemu...	[more]
gi\|762087509\|ref\|XP_011426046.1\|	8.239e-111	75.12	PREDICTED: ras-related protein Rab-5C [Crassostrea...	[more]
gi\|1238880886\|ref\|XP_022253472.1\|	1.802e-110	75.81	ras-related protein Rab-5C-like isoform X1 [Limulu...	[more]
gi\|926638429\|ref\|XP_013785230.1\|	2.696e-110	75.81	ras-related protein Rab-5C-like isoform X2 [Limulu...	[more]
gi\|1242769869\|ref\|XP_022324353.1\|	5.606e-110	74.65	ras-related protein Rab-5B-like [Crassostrea virgi...	[more]
gi\|961729388\|ref\|XP_014925091.1\|	8.300e-110	76.44	PREDICTED: ras-related protein Rab-5C [Acinonyx ju...	[more]
gi\|1285010644\|ref\|XP_023017322.1\|	9.088e-110	74.88	ras-related protein Rab-5B isoform X1 [Leptinotars...	[more]
gi\|1227955595\|ref\|XP_021942459.1\|	9.935e-110	74.77	ras-related protein Rab-5B isoform X1 [Zootermopsi...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold71_size417697	supercontig	scaffold71_size417697:347145..347798 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold71_size417697-processed-gene-3.3-mRNA-1	snap_masked-scaffold71_size417697-processed-gene-3.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold71_size417697:347145..347798+

gene from alignment at scaffold71_size417697:347145..347798+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold71_size417697-processed-gene-3.3 ID=snap_masked-scaffold71_size417697-processed-gene-3.3|Name=ras-related protein rab-5c|organism=Tigriopus kingsejongensis|type=gene|length=654bp|location=Sequence derived from alignment at scaffold71_size417697:347145..347798+ (Tigriopus kingsejongensis)
ATGTCGTCGGGCGTGAACCGCAGCGGCGCCGCCGCCGCCGGCGCCGCCAA
CCGCATGTCCCAGTTCAAGCTGGTGCTCTTGGGCGAGTCGGCCGTGGGCA
AGTCCTCGCTGGTGCTGCGCTTCGTCAAGGGCCAGTTCCACGAGTTCCAG
GAGTCGACCATCGGGGCGGCCTTCCTCACGCAGACGCTGTGTCTGGACGA
CACGACGGTCAAGTTCGAGATCTGGGACACGGCGGGGCAGGAGCGCTACC
ACTCGCTGGCCCCCATGTACTACCGCGGGGCGCAGGCGGCCATCGTGGTC
TACGACATCACCAACCAGGACACGTTCACCCGGGCCAAGAACTGGGTCAA
GGAGCTGCAGCGTCAGGCTCGGGCCGACATCGTCATCGCCTTGGCCGGGA
ACAAGAGCGACTTGGCCCAGAAGCGGCTCGTCGAGTACGAGGAGGCCAAC
GCCTACGCCGAGGAGAATGGACTCCTCTTCATGGAGACGTCCGCCAAGAA
CGCCAACAACGTCAACGAGATTTTCTTGGCCATTGCCCGACAATTACCGC
GGGAGCGCGAGACCGCTTCGGCCACGGGCGCCTCCGGCGGCGTGCGGGTG
GGGGCCGACGGCCAAGCCAATGGTGGCGGCAAGTTGGGCGCGTGTTGCAA
ATAG

Synonyms

The feature 'ras-related protein rab-5c' has the following synonyms


Synonym
Tk11810

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