alpha-methylacyl- racemase, snap_masked-scaffold7547_size3127-processed-gene-0.2 (gene) Tigriopus kingsejongensis

Overview


Name	alpha-methylacyl- racemase
Unique Name	snap_masked-scaffold7547_size3127-processed-gene-0.2
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11")

HSP 1 Score: 283.493 bits (724), Expect = 2.197e-93
Identity = 156/385 (40.52%), Postives = 230/385 (59.74%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQE-GPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGII--SARSTGEGQVVDAAMVDGAAALMN-MFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD-GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTF-IEVGGLTQAGPAPRFSKT-APATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            L+GV+++E+AG+   PF +M+L+D  A VIRV+     N  D    P D   RG++SI ++LK+ +G   V KL+  +D  +E FRPGV E++ L PD     NP L+Y R++G+GQE  P +  AGHDINYI+L+GAL  IGR  + PVPP+N+VGDFGGGG+  AFG+   +   S  S+G+GQ++D  +  GA+ L   ++        W + RG N+LDTGA FY+VYET + G Y+S+G++EPQFY+ LL    L   E++P      +   +K+  A  F+TKTR EW E+  + D C  PVLS+D+ +S  + + +  F I   G +   PAP+ S+T A  +       G+H+ ++L +  GF    I  L S   I
Sbjct:    3 LKGVRVVEMAGLAXAPFTSMILADFGASVIRVD-----NHPDAVVYP-DVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYP--QFGGDTKKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSS--NELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISEEII 377

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 354.369 bits (908), Expect = 1.300e-119
Identity = 172/376 (45.74%), Postives = 246/376 (65.43%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVG-GLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRS 376
            L+GV+++ELAG+ PGPF  M+L+D  AEV+RV R  +          ++ L RG+RS+ +DLK  +GV  + ++  +AD L+E FR GV E++ LGP+  L  NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+D++MV+G A L +  W  +  G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFYA LL+  GL E E+ P Q S ++WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++A  H HN ER +FI  G  L    PAP  S+T PA P+    P  G+HT +VL ++GF  + I  L S
Sbjct:    3 LRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--------ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGL-ESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEILQLHS 368

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 348.206 bits (892), Expect = 3.812e-117
Identity = 174/380 (45.79%), Postives = 246/380 (64.74%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-EVGGLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            L+GV+++ELAG+ PGPF  M+L+D  AEV+ V+R  +VN   P++     L RG+RS+ +DLK   G   + ++  +AD L+E FR GV E++ LGP+     NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+DA MV+G A L    W  +A G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFY  LL+  GL E E+ P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL++++A  H HN ERG+FI +        PAP+ S+T PA P+    P  G+HT +VL D+GF  + I  L S   I
Sbjct:    3 LRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVN--HPSH-----LARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGL-ESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRII 373

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 331.257 bits (848), Expect = 1.938e-110
Identity = 165/381 (43.31%), Postives = 235/381 (61.68%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED-FPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGL-TQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            LQG+ ++EL+G+ PGPF AM+L+D  A V+RV+R  +             L RG+RS+ +DLK P G   + +L +++D L+E FR GV E++ LGP+     NP+L+Y R++G+GQ G +   AGHDINY+AL+G L  IGR+G+ P  PLNL+ DF GGG++ A G+   +     TG+GQV+DA MV+G A L +  W  +    W   RG NMLD GAPFY  Y T+DG ++++G+IEPQFY  L++  GLG + D  P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++   H HN ERG+FI          PAP    T PA P+    P  G+HT+++L +FGF  + I  L S   I
Sbjct:    3 LQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGS-------RYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIK--GLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNT-PAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKII 373

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component)

HSP 1 Score: 266.929 bits (681), Expect = 2.389e-85
Identity = 146/356 (41.01%), Postives = 204/356 (57.30%), Query Frame = 0

Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLAR-NPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD--GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQ 355
            PL G  ++ELAG+ PGPF  M+L+D  A V+R++         P +P  D L R + SI +DLK+P   + +L ++ +AD LI+ FRPGV ER+GL P + L + N +LV  R+TG+ ++G Y   AGHDINY+A++G L  +GRAG+ P PP N++GDF GGG +   G+   ++S  +TG GQVV+A MVDG+A L  M        FW   RG N+LD G P+Y  Y T D  G Y+++G++EP FY  L+R  GL ++ D PP+  R+ WP ++      F  +TR EW E+ + TD C  PVL                  E G L +AG   R      ATP     PGQ
Sbjct:    8 PLSGKLVVELAGLAPGPFCGMLLADYGASVLRID--------GPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGL-DKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVL------------------EQGELEKAGFEQRLPVNLGATPGKPILPGQ 336

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4)

HSP 1 Score: 197.593 bits (501), Expect = 6.611e-59
Identity = 111/339 (32.74%), Postives = 177/339 (52.21%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP-KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPI-GRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIIS-ARSTGEGQVVDAAMVDGAAALMNMFWGMRAN-GFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPR 338
            L G+K++E+AG+ P P   MML+D  A+V  +         D  NP  +  L RG+    +DLKNPE ++ V  L + +D L++ +RPG  E+MGL P      N  L+  +++G+GQ G  S   GHDINY+AL+G L    G     P PP N++ DF GGG+  AFG+   I + + + G+G ++D +M +G A L +           + D+    +     P Y  Y+T D  +V++G++EP+FY  L +L  +  R+ F           + E +   F  KTRD+W  + +  + C  PVL + +  S+  +V+R +F +      A P+PR
Sbjct:    5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVI---------DKKNPAIEQRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNVDGRDLFVNPGK------ITEDLESRFLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 164.851 bits (416), Expect = 1.914e-45
Identity = 119/404 (29.46%), Postives = 195/404 (48.27%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP--------KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSR-SEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            + PL+GVKI++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P+GV+ + +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ +G+   Q +A + ++  L E  D   +   H R      + + ++E F+ +   +W  L E + V + P+ +M +  + P  +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L S+G +
Sbjct:   45 IKPLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG--LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 439

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 161.384 bits (407), Expect = 2.824e-44
Identity = 127/406 (31.28%), Postives = 189/406 (46.55%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG  D     P +VY  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A L ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELLCSGVI 430

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 9.213e-44
Identity = 124/406 (30.54%), Postives = 190/406 (46.80%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G++    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A + ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLLCSGVI 430

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase)

HSP 1 Score: 134.035 bits (336), Expect = 2.314e-34
Identity = 116/400 (29.00%), Postives = 175/400 (43.75%), Query Frame = 0

Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD-----------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALM-NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSG---LGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-----EVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            PL  V+++EL     GPF   +L+D  AEVI+VE       GDP                  L R ++SI +DL+ PEG   V +L+   D ++E FRPG  E  GLG ++  A NP L+  R++G+GQ GPY   AG      A+ G     G   + P      +GD        A G    +   + +G+GQVVD  + +G  ALM +M    +  G    ER  N+L   AP  ++Y T+DG +  IG+     +  L +  G   L     F    +R E  A + + +A      T D+   +M+   V    + +  +  S PH + R + I     ++G +      PR S T           GQH  ++  D  G   D +A L++   I
Sbjct:    9 PLDDVRVLELGAFLAGPFCGQLLADFGAEVIKVEPPGK---GDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGD-SLAATFAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIR-ERTGNILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGEHQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLAMLQAKRVI 402

[Close]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase)

HSP 1 Score: 124.79 bits (312), Expect = 4.930e-31
Identity = 103/375 (27.47%), Postives = 160/375 (42.67%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDA-------LTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNM-FWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYA--ELLRLSGLGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAP-AAHPGQHTDDVLADF 364
            GP +G+ +I++  +  GPF   +L +M A VI+VE     +      P  D        +  G+ S+ +DLKN       + +++QAD L E FRPG  E++G   +     NP+L+Y   +G+G  GP   A  +D    A++G +   G     PV     + D  GG  L + G+   +     +  G  VD AM D   + +        A G  + +R  N     APF DV+ T D         +  F A  + L L+ L     F     R +  A +K+ +    KT+  + W   +    V  AP+LS+ +A   P    R   IE GG+   G   + S  A     P AA   QH + +  +F
Sbjct:    8 GPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFS-GIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATG-KSPQRLGNRHPYMAPF-DVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEF 379

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1272473405|gb|PHX71449.1| (carnitine dehydratase [Acidimicrobium sp.])

HSP 1 Score: 503.827 bits (1296), Expect = 6.242e-176
Identity = 238/379 (62.80%), Postives = 295/379 (77.84%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDER-GTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGA 379
            GPL G KIIE+AGIGPGPFAAM+LSDM AE+IRV+R+ AV G  P+ P  D + RGR++I +DLKNPEGVEA+L+L+E AD +IEGFRPGV ER+G+GPD C ARNP++V+GRMTGWGQEG Y+ AAGHDINYI+L+G+L    RAG+APVPPLN+VGDFGGGGM LA+G+ C ++ A+ +G+GQVVD AMVDGAA LM MFW  ++ G +N+   GTN+LDTGA FYDV+E  DG Y+S+GSIEPQFYAEL++L+GL    DF  Q  +S WP +K  + E+ K KTRDEWC +ME TDVCFAPVL+M +AA+HPHNVER TFI V G  Q  PAPRFS+T P    P+AH GQHT +VL D+G     +  L +SGA
Sbjct:    3 GPLTGYKIIEIAGIGPGPFAAMLLSDMGAEIIRVDRAQAVRGTPPSTPAGDLMLRGRKNIALDLKNPEGVEALLQLVENADAIIEGFRPGVMERLGIGPDVCQARNPRIVFGRMTGWGQEGMYAQAAGHDINYISLSGSLAHFARAGEAPVPPLNMVGDFGGGGMFLAYGVVCALLEAQKSGKGQVVDTAMVDGAAVLMTMFWSFKSMGIFNENAPGTNLLDTGAHFYDVFECKDGKYISLGSIEPQFYAELMKLTGLEGDADFAKQMDQSMWPGLKIRLQEVMKAKTRDEWCAIMEATDVCFAPVLTMSEAAAHPHNVERQTFINVNGHMQPAPAPRFSRTVPEIARPSAHAGQHTAEVLRDWG--VANVDALLASGA 379

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|745854212|gb|KIE51504.1| (carnitine dehydratase [marine actinobacterium MedAcidi-G1])

HSP 1 Score: 503.827 bits (1296), Expect = 6.904e-176
Identity = 238/381 (62.47%), Postives = 293/381 (76.90%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MG L GVK++ELAGIGPGPF  MML+DM A+VIR++R+ +V   D  +PP D ++RGR+SIG+DLKNP+G E VLKL+E +D   EGFRPGV ER+G+GPDDCL RNP LVYGRMTGWGQEGPY+ AAGHDINYI+LAG L  IGR+   PVPPLNLVGDFGGGGM LAFG+ C ++ AR +G+GQVVDAAMVDGAA+LM+ F+GM   GF   ERG N+LDTGA FYDVYE SDG ++S+GSIEPQFY E+L    L + E+F  QH R +WP +K+ +A+L  TKTR EW +L+  +DVC+APVLS  +A  HPHNVER TF+EV G+TQ  PAPRFS+T      P AHPGQH+ +VL  FGF  + I  L S+GA++
Sbjct:    1 MGALDGVKVLELAGIGPGPFCGMMLADMGADVIRIDRAGSVKEFDENSPPNDIISRGRKSIGIDLKNPQGRETVLKLVETSDIFFEGFRPGVAERLGVGPDDCLKRNPALVYGRMTGWGQEGPYANAAGHDINYISLAGVLAHIGRSESGPVPPLNLVGDFGGGGMYLAFGMVCALVEARQSGQGQVVDAAMVDGAASLMSFFYGMMETGFHQQERGVNLLDTGAHFYDVYECSDGEWISLGSIEPQFYKEMLEKLEL-DAEEFGFQHDREKWPELKQKMAKLIATKTRSEWDQLLAGSDVCYAPVLSAYEAIEHPHNVERKTFVEVAGVTQPAPAPRFSRTPGKIERPPAHPGQHSKEVLMQFGFKEEEITELLSTGAVS 380

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|505254797|ref|WP_015441899.1| (CoA transferase [Ilumatobacter coccineus] >gi|464099770|dbj|BAN02652.1| alpha-methylacyl-CoA racemase [Ilumatobacter coccineus YM16-304])

HSP 1 Score: 503.442 bits (1295), Expect = 1.053e-175
Identity = 245/380 (64.47%), Postives = 290/380 (76.32%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWN-DERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G KIIE+AGIGPGPFAAM+L+D+ AEV+RVER+ AV G  P  P  D L RGRR++ +DLK+P+G  A+L+L+  AD LIEGFRPGV ER+G+GPD CL RNPKLV+GRMTGWGQ G Y+ AAGHDINYIALAGAL   GR    P PPLN+VGDFGGGGM LA G+   ++ A S+G+GQVVD AMVDG+A LM MFW  +A G ++ + RGTN+LDTGA FYDVYE SDG Y+S+GSIEPQFYAEL RL+GL + E F  Q  +SEW  +KE +  LF TKTRDEWCELMEHTDVCFAPVL+M +AA HPHNVERGTF+E GG+TQ  PAPRFS+T        A PGQHT DV A++G D   I  +  SGAI
Sbjct:    3 GPLHGKKIIEIAGIGPGPFAAMLLADLGAEVVRVERAGAVRGPAPDQPHGDILLRGRRNVAIDLKHPDGAAALLELVAGADALIEGFRPGVMERLGVGPDVCLERNPKLVFGRMTGWGQTGSYAQAAGHDINYIALAGALAHFGRKDGPPTPPLNMVGDFGGGGMFLALGVVAAMLEATSSGQGQVVDTAMVDGSAVLMTMFWSFKAMGMFDENHRGTNLLDTGAHFYDVYECSDGAYISLGSIEPQFYAELRRLTGLADDEQFAKQMDQSEWGPLKERLTALFLTKTRDEWCELMEHTDVCFAPVLTMSEAAEHPHNVERGTFVEHGGVTQPAPAPRFSRTEATVDGLPAWPGQHTRDVFAEWGVDGTAIDSMLESGAI 382

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|931512515|gb|KPK90562.1| (carnitine dehydratase [Anaerolineae bacterium SM23_ 63])

HSP 1 Score: 501.901 bits (1291), Expect = 3.888e-175
Identity = 240/381 (62.99%), Postives = 292/381 (76.64%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPL+GVK++E+A IGPGPFAAMMLSDM AEV+R++R    +  D      D L RGR+S+ +DLKNP GVE VL+L+E +D LIEGFRPGV ER+GLGP+ CL RNP LVYGR+TGWGQEGP +  AGHDINYIALAG L  IGR  QAPVPPLNL+GDFGGGGMLLAFG+ C ++   ++GEGQVVDAAMVDGAA LM M   +RA   WN ERGTN+LDTGAPFY+ YE  DG Y+S+GS+EPQFY  L++L+GL E    P Q  R+ WPA+K+ +A++FK+KTR+EWCE+ME TDVCFAPVLSM +A  HPH   RGT+I+V  +TQ  PAPRFS+TAP    P + PGQHT++ L + GF  + IAGLR   AIA
Sbjct:    1 MGPLKGVKVLEIASIGPGPFAAMMLSDMGAEVLRIDRIIGESQVDLIKAETDLLNRGRKSVSIDLKNPAGVEVVLRLVEGSDMLIEGFRPGVMERLGLGPEVCLERNPSLVYGRVTGWGQEGPLARTAGHDINYIALAGVLSAIGRVDQAPVPPLNLLGDFGGGGMLLAFGVVCALLERTTSGEGQVVDAAMVDGAALLMTMIHALRAMDAWNLERGTNLLDTGAPFYETYECRDGEYISVGSLEPQFYDLLIKLTGL-EGGKLPDQMDRTAWPALKDRMAQIFKSKTREEWCEVMEGTDVCFAPVLSMTEAPEHPHLKHRGTYIKVADITQPAPAPRFSRTAPEVSRPPSRPGQHTEEALLERGFTGEEIAGLREHEAIA 380

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|684285356|gb|KGA05223.1| (alpha-methylacyl-CoA racemase [actinobacterium acAcidi])

HSP 1 Score: 501.13 bits (1289), Expect = 7.156e-175
Identity = 236/379 (62.27%), Postives = 296/379 (78.10%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDER-GTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGA 379
            GPL G KIIE+AGIGPGPFAAM+L+DM AE+IRV+R+ AV G  P+ P  D + RGR++I +DLK+PEGVEA+L+L+E+AD +IEGFRPGV ER+G+GPD C ARNP++V+GRMTGWGQEG Y+ AAGHDINYI+L+G+L    RAG+APVPPLN+VGDFGGGGM LA+G+ C ++ A+ +G+GQVVD AMVDGAA LM MFW  ++ G +N+   GTN+LDTGA FYDV+E  DG Y+S+GSIEPQFYAEL++L+GL    DF  Q  +S WP +K  + E+ K KTRDEWC +ME TDVCFAPVL+M +AA+HPHNVER TFI V G  Q  PAPRFS+T P    P+AH GQHT +VL D+G     +  L +SGA
Sbjct:    3 GPLTGYKIIEIAGIGPGPFAAMLLADMGAEIIRVDRAQAVRGTPPSTPAGDLMLRGRKNIALDLKSPEGVEALLQLVEKADAIIEGFRPGVMERLGVGPDVCQARNPRIVFGRMTGWGQEGMYAQAAGHDINYISLSGSLAHFARAGEAPVPPLNMVGDFGGGGMFLAYGVVCALLEAQKSGKGQVVDTAMVDGAAVLMTMFWSFKSMGIFNENAPGTNLLDTGAHFYDVFECKDGKYISLGSIEPQFYAELMKLTGLEGDADFAKQMDQSMWPGLKIRLQEVMKAKTRDEWCAIMEATDVCFAPVLTMSEAAAHPHNVERKTFINVNGHMQPAPAPRFSRTVPEIARPSAHAGQHTAEVLRDWG--VANVDALLASGA 379

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|918750150|ref|WP_052603213.1| (CoA transferase [Actinobacteria bacterium IMCC26207] >gi|829597432|gb|KLR59872.1| putative acyl-CoA transferase/carnitine dehydratase [Actinobacteria bacterium IMCC26207])

HSP 1 Score: 497.278 bits (1279), Expect = 2.950e-173
Identity = 237/387 (61.24%), Postives = 295/387 (76.23%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGER-----EDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADF-GFDADTIAGLRSSGAIA 381
            MGPL G+KI+E+AGIGP PFAAMMLSDM A+VIRV+R    NGGDPA PP D   RGRRSI ++LK+  G++ +L LI QAD ++EGFRPGV ER+G GP+ C   NPKLVYGRMTGWGQ+GPY+L AGHDINYIALAG L  +GR G+ P PP+NLVGDFGGGGMLLAFGL C ++ A  +G+GQVVDAAMVDG+A+LM M WG +A G W+D+RGTN+LDT   FYD YE +DG +VSIGSIEPQFYAELL+ + L +      E  P Q  +++WP MK  +A +F TK+RDEW  L+E TD+CFAPVL+MD+AA HPHNV R TF+EV G+TQ  P+PRF +T      P +HPGQHTD++L ++ G ++  IA LR S ++A
Sbjct:    1 MGPLSGLKIVEVAGIGPAPFAAMMLSDMGADVIRVDRLENSNGGDPAAPPSDIFNRGRRSIALNLKSAGGLKTLLDLIGQADAVMEGFRPGVAERLGFGPEVCQEINPKLVYGRMTGWGQDGPYALTAGHDINYIALAGVLAHLGREGEKPTPPINLVGDFGGGGMLLAFGLVCALLEAGRSGQGQVVDAAMVDGSASLMTMVWGFKAMGMWSDDRGTNLLDTATHFYDTYECADGNFVSIGSIEPQFYAELLKHTNLEQVYVDLGEPMPTQMDKAKWPEMKAHLAAIFVTKSRDEWSALLEGTDICFAPVLTMDEAAQHPHNVHRKTFVEVAGITQPAPSPRFDRTPGEIQRPPSHPGQHTDEILTEWLGAESQEIAELRQSDSVA 387

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1200605950|gb|OUX15205.1| (carnitine dehydratase [Gammaproteobacteria bacterium TMED243])

HSP 1 Score: 493.812 bits (1270), Expect = 5.337e-172
Identity = 241/381 (63.25%), Postives = 291/381 (76.38%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPL G KIIELAGIGPGPF  MML+DM AEVIRVER +A    +    PKD LTR RRSI VDLKNP+GVE VL+L+E ADGLIEGFRPGVTER+GLGP+ C ARNP+LVYGRMTGWGQEGP + AAGHDINYI+LAGAL  IGR G+ PVPPLNLVGDFGGGGMLLA+G+ CG++    + EGQV+DAAMVDG AALM MF+ M A+G ++ +RGTN+LD GA FYD YET+DG +VSIGSIEPQFYA L+  +GL + E F PQ ++  W  +K  + E+F TKT+ EWC++ME +DVCFAPVL++ DAA+HPHNV R ++ EV G+ Q  PAPRFS+T  A       PG+ +  VLADFG  A  +A L   G ++
Sbjct:    1 MGPLNGFKIIELAGIGPGPFCGMMLADMGAEVIRVERIAAAQATEA---PKDVLTRNRRSIAVDLKNPKGVETVLRLVEGADGLIEGFRPGVTERLGLGPEQCQARNPRLVYGRMTGWGQEGPMAQAAGHDINYISLAGALHAIGRPGERPVPPLNLVGDFGGGGMLLAYGMVCGLLEVTKSNEGQVIDAAMVDGTAALMAMFYSMSASGAFDTQRGTNLLDGGAHFYDTYETADGEHVSIGSIEPQFYALLMEKAGL-DAEYFQPQMNKGRWGELKAKLTEVFLTKTQAEWCDIMEGSDVCFAPVLNLIDAATHPHNVARNSYQEVAGVLQQAPAPRFSRTPAAAIQAPRVPGEDSASVLADFGLTATEVAQLTEQGVVS 377

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1272460355|gb|PHX59472.1| (carnitine dehydratase [Actinobacteria bacterium])

HSP 1 Score: 491.886 bits (1265), Expect = 2.821e-171
Identity = 238/380 (62.63%), Postives = 291/380 (76.58%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAV-NGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL GVK++ELAGIGPGPFAAM+L+D+ A+V+RV RS +V NG DP   P   + R RRSIG+DLKNP+GVE +L+L+E AD LIEGFRPGVTER+G+GPD CLARN +LVYGRMTGWGQEGP + AAGHDINYIALAGAL   GRAG+ P PP+NLVGDFGGGGM LAFG+ C I+ AR +G GQVVDAAMVDGAA LM+  WGMRA G +N+ERGTN+LD+GAP YD YETSDG ++++G++E QFY E L  +GL   E+ PP   +S WP +K    ELFK+KTR EWC L+E +D CFAPVL M +AA HPH V+R T +E  GL Q  PAPRFS+T     +  A PGQHTD+VL ++G  A+ +  L + GA+
Sbjct:    3 GPLAGVKVLELAGIGPGPFAAMLLADLGADVVRVHRSQSVENGVDPGGVP--IMDRNRRSIGIDLKNPDGVETLLRLVESADALIEGFRPGVTERLGIGPDVCLARNERLVYGRMTGWGQEGPLAQAAGHDINYIALAGALAHFGRAGEKPTPPINLVGDFGGGGMFLAFGVVCAILEARGSGSGQVVDAAMVDGAATLMSFVWGMRAYGVFNEERGTNLLDSGAPHYDTYETSDGQFIALGALEAQFYEEFLEKTGL-VSENLPPVTDKSSWPELKIRFTELFKSKTRSEWCSLLEGSDACFAPVLPMSEAAVHPHIVDRKTIVEFEGLLQPAPAPRFSRTPGEIRSGVAIPGQHTDEVLLEWGISAEEVKDLHARGAV 379

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1056183851|ref|WP_067676850.1| (CoA transferase [Altererythrobacter dongtanensis] >gi|1049199239|gb|ANY19437.1| Formyl-coenzyme A transferase [Altererythrobacter dongtanensis])

HSP 1 Score: 491.5 bits (1264), Expect = 5.191e-171
Identity = 236/380 (62.11%), Postives = 285/380 (75.00%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            GPL G++I+E AGIGPGPF  MML+D  AEVIR++R+S   GG      KD L RGR+SI ++LK+ EGV    KL   ADG+IEGFRPGV ER+GLGPD+ LA +P+LVYGRMTGWGQ GPY+  AGHDINYIALAGAL   GRAG  P PP+N+VGDFGGGGM+LAFG+   +++    G+GQV+D AM DG A LM+M  GM+A G W++E G NMLDTGA FYD YET+DG +VSIGSIEPQFYAEL R++GL E  DF  QH R  WPA+K+ +A LF+TKTRDEW  LMEHTDVC+APVL+M +A  HPHN  RGTF++VGG  Q  PAPR+S TA ATP PA  PG  T++VL   G  A+ IAGLR +G +A
Sbjct:    3 GPLAGIRIVEFAGIGPGPFCGMMLADHGAEVIRIDRASGSRGGSQPVTSKDVLARGRKSIAINLKSAEGVALARKLCGSADGIIEGFRPGVMERLGLGPDELLADHPRLVYGRMTGWGQTGPYAPWAGHDINYIALAGALAHFGRAGGKPTPPINMVGDFGGGGMMLAFGMTAALLNVARGGQGQVIDCAMTDGTAVLMSMMHGMKAMGVWSEELGANMLDTGAHFYDTYETADGKFVSIGSIEPQFYAELRRIAGLAEDTDFDAQHDRKGWPALKDKLAALFRTKTRDEWDALMEHTDVCYAPVLTMGEAVEHPHNKARGTFVDVGGAMQPAPAPRYSGTATATPEPAPMPGDQTEEVLGALGLGAEEIAGLREAGTVA 382

[Close]

BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|745853108|gb|KIE50432.1| (carnitine dehydratase [marine actinobacterium MedAcidi-G2B])

HSP 1 Score: 490.345 bits (1261), Expect = 1.101e-170
Identity = 235/381 (61.68%), Postives = 292/381 (76.64%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MG L GV+++ELAGIGPGPF  MML+DM A+VIR++R+++V    P NPP   + RGRRSIG+DLK+PEGVE  L LIE+AD + EGFRPGV ER+G+GP+ CL RNP LVYGRMTGWGQ GPY+ AAGHDINYIALAGAL   GR+   P+PPLNLVGDFGGGGM LAFG+ C +++AR+TG GQVVDAAMVDG A+LM    GM A GF   ERG+N+LDTGA FYDVYE SDG Y+SIGSIEPQFY+EL++   L + E F  Q  R++WP +K+ +A++ K K+RDEW E++  +DVC+APVL++++A  HPHN+ER TF EV GLTQ  PAPR S T      P AHPGQHTD++LA+ G +   I  LR+SG +A
Sbjct:    1 MGALDGVQVVELAGIGPGPFCGMMLADMGADVIRIDRAASVKSEQPDNPPLSVIDRGRRSIGIDLKSPEGVEVALSLIEKADMVFEGFRPGVAERLGVGPEVCLERNPSLVYGRMTGWGQSGPYAHAAGHDINYIALAGALAHFGRSDSGPIPPLNLVGDFGGGGMYLAFGMVCALLNARNTGTGQVVDAAMVDGVASLMGFIHGMMATGFQVPERGSNLLDTGAHFYDVYECSDGKYISIGSIEPQFYSELIQKLEL-DSEKFAHQMDRTKWPELKDEIAKVVKGKSRDEWDEILAGSDVCYAPVLTVEEATQHPHNIERNTFTEVAGLTQPMPAPRLSVTPGTIQRPPAHPGQHTDEILAEAGMN---IESLRTSGVVA 377

The following BLAST results are available for this feature:

BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
BLAST of alpha-methylacyl- racemase vs. SwissProt
BLAST of alpha-methylacyl- racemase vs. nr

BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000001226	2.197e-93	40.52	supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 ...	[more]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|341940628\|sp\|O09174.4\|AMACR_MOUSE	1.300e-119	45.74	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|13637497\|sp\|P70473.3\|AMACR_RAT	3.812e-117	45.79	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|313104070\|sp\|Q9UHK6.2\|AMACR_HUMAN	1.938e-110	43.31	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|74620364\|sp\|Q8J0F0.1\|CEFD2_ACRCH	2.389e-85	41.01	RecName: Full=Isopenicillin N epimerase component ...	[more]
gi\|29840845\|sp\|Q09618.3\|YS74_CAEEL	6.611e-59	32.74	RecName: Full=CaiB/baiF CoA-transferase family pro...	[more]
gi\|71152390\|sp\|Q9HAC7.2\|SUCHY_HUMAN	1.914e-45	29.46	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|71152392\|sp\|Q68FU4.1\|SUCHY_RAT	2.824e-44	31.28	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|408360016\|sp\|Q7TNE1.2\|SUCHY_MOUSE	9.213e-44	30.54	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467185\|sp\|A9WGE3.1\|SCCT_CHLAA	2.314e-34	29.00	RecName: Full=Succinyl-CoA--D-citramalate CoA-tran...	[more]
gi\|19861453\|sp\|P76518.2\|ACOCT_ECOLI	4.930e-31	27.47	RecName: Full=Acetyl-CoA:oxalate CoA-transferase; ...	[more]

Pages

BLAST of alpha-methylacyl- racemase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1272473405\|gb\|PHX71449.1\|	6.242e-176	62.80	carnitine dehydratase [Acidimicrobium sp.]	[more]
gi\|745854212\|gb\|KIE51504.1\|	6.904e-176	62.47	carnitine dehydratase [marine actinobacterium MedA...	[more]
gi\|505254797\|ref\|WP_015441899.1\|	1.053e-175	64.47	CoA transferase [Ilumatobacter coccineus] >gi\|4640...	[more]
gi\|931512515\|gb\|KPK90562.1\|	3.888e-175	62.99	carnitine dehydratase [Anaerolineae bacterium SM23...	[more]
gi\|684285356\|gb\|KGA05223.1\|	7.156e-175	62.27	alpha-methylacyl-CoA racemase [actinobacterium acA...	[more]
gi\|918750150\|ref\|WP_052603213.1\|	2.950e-173	61.24	CoA transferase [Actinobacteria bacterium IMCC2620...	[more]
gi\|1200605950\|gb\|OUX15205.1\|	5.337e-172	63.25	carnitine dehydratase [Gammaproteobacteria bacteri...	[more]
gi\|1272460355\|gb\|PHX59472.1\|	2.821e-171	62.63	carnitine dehydratase [Actinobacteria bacterium]	[more]
gi\|1056183851\|ref\|WP_067676850.1\|	5.191e-171	62.11	CoA transferase [Altererythrobacter dongtanensis] ...	[more]
gi\|745853108\|gb\|KIE50432.1\|	1.101e-170	61.68	carnitine dehydratase [marine actinobacterium MedA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold7547_size3127	supercontig	scaffold7547_size3127:11..1156 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1	snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold7547_size3127:11..1156-

gene from alignment at scaffold7547_size3127:11..1156-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold7547_size3127-processed-gene-0.2 ID=snap_masked-scaffold7547_size3127-processed-gene-0.2|Name=alpha-methylacyl- racemase|organism=Tigriopus kingsejongensis|type=gene|length=1146bp|location=Sequence derived from alignment at scaffold7547_size3127:11..1156- (Tigriopus kingsejongensis)
ATGGGTCCATTGCAGGGTGTCAAGATCATCGAGCTCGCCGGAATCGGGCC
GGGGCCGTTTGCCGCGATGATGCTGTCCGACATGGACGCCGAGGTGATCA
GGGTCGAGCGGTCCTCGGCCGTGAATGGTGGCGACCCGGCCAACCCGCCG
AAAGACGCACTGACTCGCGGTCGGCGTTCGATCGGCGTCGACCTCAAGAA
TCCCGAGGGTGTCGAAGCCGTGCTCAAGCTCATCGAGCAGGCCGACGGCC
TCATCGAGGGATTCCGTCCCGGCGTCACCGAGCGGATGGGTCTCGGACCA
GACGACTGTCTCGCGCGGAACCCGAAGCTCGTCTACGGCCGCATGACCGG
TTGGGGCCAGGAAGGTCCCTACTCGCTCGCCGCCGGCCACGACATCAACT
ACATCGCGTTGGCCGGAGCACTCGAACCCATCGGCCGGGCAGGCCAGGCA
CCGGTGCCTCCGCTCAACCTCGTCGGCGACTTCGGCGGTGGCGGCATGCT
CCTGGCCTTCGGGCTGGCCTGTGGCATCATCTCCGCCCGTTCCACCGGTG
AAGGACAGGTCGTCGATGCGGCGATGGTCGACGGCGCCGCAGCGCTCATG
AACATGTTCTGGGGCATGCGGGCCAACGGATTCTGGAATGACGAGCGTGG
TACCAACATGCTCGACACCGGTGCGCCGTTCTACGACGTCTACGAGACGT
CTGACGGTCTCTACGTCTCGATCGGGTCGATCGAGCCCCAGTTCTACGCC
GAGCTGCTGCGGCTCTCCGGTCTCGGTGAGCGTGAGGACTTCCCACCGCA
GCACAGCCGGAGCGAGTGGCCCGCCATGAAGGAGACCGTCGCCGAACTGT
TCAAGACCAAGACCCGCGACGAGTGGTGCGAGCTCATGGAACACACCGAC
GTCTGCTTCGCCCCGGTGCTGTCGATGGACGACGCAGCCAGCCATCCTCA
CAACGTCGAGCGGGGGACCTTCATCGAGGTCGGTGGGCTCACCCAGGCCG
GACCGGCTCCTCGCTTCTCCAAGACCGCGCCGGCCACACCTGCTCCCGCG
GCCCACCCCGGTCAGCACACCGACGACGTCCTCGCCGACTTCGGCTTCGA
CGCCGACACGATCGCCGGCCTGCGTTCTTCGGGAGCGATCGCCTAG

Synonyms

The feature 'alpha-methylacyl- racemase' has the following synonyms


Synonym
Tk10844

Add to Basket

Pages

Pages

Search form