alpha-methylacyl- racemase, snap_masked-scaffold7547_size3127-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11") HSP 1 Score: 283.493 bits (724), Expect = 2.197e-93 Identity = 156/385 (40.52%), Postives = 230/385 (59.74%), Query Frame = 0 Query: 4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQE-GPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGII--SARSTGEGQVVDAAMVDGAAALMN-MFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD-GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTF-IEVGGLTQAGPAPRFSKT-APATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380 L+GV+++E+AG+ PF +M+L+D A VIRV+ N D P D RG++SI ++LK+ +G V KL+ +D +E FRPGV E++ L PD NP L+Y R++G+GQE P + AGHDINYI+L+GAL IGR + PVPP+N+VGDFGGGG+ AFG+ + S S+G+GQ++D + GA+ L ++ W + RG N+LDTGA FY+VYET + G Y+S+G++EPQFY+ LL L E++P + +K+ A F+TKTR EW E+ + D C PVLS+D+ +S + + + F I G + PAP+ S+T A + G+H+ ++L + GF I L S I Sbjct: 3 LKGVRVVEMAGLAXAPFTSMILADFGASVIRVD-----NHPDAVVYP-DVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYP--QFGGDTKKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSS--NELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISEEII 377
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 354.369 bits (908), Expect = 1.300e-119 Identity = 172/376 (45.74%), Postives = 246/376 (65.43%), Query Frame = 0 Query: 4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVG-GLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRS 376 L+GV+++ELAG+ PGPF M+L+D AEV+RV R + ++ L RG+RS+ +DLK +GV + ++ +AD L+E FR GV E++ LGP+ L NPKL+Y R++G+GQ G +S AGHDINY+AL+G L IGR+G+ P PPLNL+ DFGGGG++ G+ + +G GQV+D++MV+G A L + W + G W RG N+LD GAPFY Y+T+DG ++++G+IEPQFYA LL+ GL E E+ P Q S ++WP MK+ A++F KT+ EWC++ + TD C PVL+ ++A H HN ER +FI G L PAP S+T PA P+ P G+HT +VL ++GF + I L S Sbjct: 3 LRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--------ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGL-ESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEILQLHS 368
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 348.206 bits (892), Expect = 3.812e-117 Identity = 174/380 (45.79%), Postives = 246/380 (64.74%), Query Frame = 0 Query: 4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-EVGGLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380 L+GV+++ELAG+ PGPF M+L+D AEV+ V+R +VN P++ L RG+RS+ +DLK G + ++ +AD L+E FR GV E++ LGP+ NPKL+Y R++G+GQ G +S AGHDINY+AL+G L IGR+G+ P PPLNL+ DFGGGG++ G+ + +G GQV+DA MV+G A L W +A G W RG N+LD GAPFY Y+T+DG ++++G+IEPQFY LL+ GL E E+ P Q S +WP MK+ A++F KT+ EWC++ + TD C PVL++++A H HN ERG+FI + PAP+ S+T PA P+ P G+HT +VL D+GF + I L S I Sbjct: 3 LRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVN--HPSH-----LARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGL-ESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRII 373
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 331.257 bits (848), Expect = 1.938e-110 Identity = 165/381 (43.31%), Postives = 235/381 (61.68%), Query Frame = 0 Query: 4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED-FPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGL-TQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380 LQG+ ++EL+G+ PGPF AM+L+D A V+RV+R + L RG+RS+ +DLK P G + +L +++D L+E FR GV E++ LGP+ NP+L+Y R++G+GQ G + AGHDINY+AL+G L IGR+G+ P PLNL+ DF GGG++ A G+ + TG+GQV+DA MV+G A L + W + W RG NMLD GAPFY Y T+DG ++++G+IEPQFY L++ GLG + D P Q S +WP MK+ A++F KT+ EWC++ + TD C PVL+ ++ H HN ERG+FI PAP T PA P+ P G+HT+++L +FGF + I L S I Sbjct: 3 LQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGS-------RYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIK--GLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNT-PAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKII 373
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component) HSP 1 Score: 266.929 bits (681), Expect = 2.389e-85 Identity = 146/356 (41.01%), Postives = 204/356 (57.30%), Query Frame = 0 Query: 3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLAR-NPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD--GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQ 355 PL G ++ELAG+ PGPF M+L+D A V+R++ P +P D L R + SI +DLK+P + +L ++ +AD LI+ FRPGV ER+GL P + L + N +LV R+TG+ ++G Y AGHDINY+A++G L +GRAG+ P PP N++GDF GGG + G+ ++S +TG GQVV+A MVDG+A L M FW RG N+LD G P+Y Y T D G Y+++G++EP FY L+R GL ++ D PP+ R+ WP ++ F +TR EW E+ + TD C PVL E G L +AG R ATP PGQ Sbjct: 8 PLSGKLVVELAGLAPGPFCGMLLADYGASVLRID--------GPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGL-DKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVL------------------EQGELEKAGFEQRLPVNLGATPGKPILPGQ 336
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4) HSP 1 Score: 197.593 bits (501), Expect = 6.611e-59 Identity = 111/339 (32.74%), Postives = 177/339 (52.21%), Query Frame = 0 Query: 4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP-KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPI-GRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIIS-ARSTGEGQVVDAAMVDGAAALMNMFWGMRAN-GFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPR 338 L G+K++E+AG+ P P MML+D A+V + D NP + L RG+ +DLKNPE ++ V L + +D L++ +RPG E+MGL P N L+ +++G+GQ G S GHDINY+AL+G L G P PP N++ DF GGG+ AFG+ I + + + G+G ++D +M +G A L + + D+ + P Y Y+T D +V++G++EP+FY L +L + R+ F + E + F KTRD+W + + + C PVL + + S+ +V+R +F + A P+PR Sbjct: 5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVI---------DKKNPAIEQRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNVDGRDLFVNPGK------ITEDLESRFLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor) HSP 1 Score: 164.851 bits (416), Expect = 1.914e-45 Identity = 119/404 (29.46%), Postives = 195/404 (48.27%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP--------KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSR-SEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380 + PL+GVKI++L + GPFA M L D+ AEVI+VER A + PP ++ R ++SI V++K+P+GV+ + +L D +E + PG MGLG +D P ++Y +TG+GQ GP S AG+D A++G + G PV P + D G L A+G + G+I TG+G +D ++ A + N G + W G+ + Y ++T DG Y+ +G+ Q +A + ++ L E D + H R + + ++E F+ + +W L E + V + P+ +M + + P + G +E VG ++ GPA R+SK + P GQHT +L + +D I L S+G + Sbjct: 45 IKPLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG--LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 439
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor) HSP 1 Score: 161.384 bits (407), Expect = 2.824e-44 Identity = 127/406 (31.28%), Postives = 189/406 (46.55%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380 M PL+GV+I++L + GPFA M L D+ AEVI+VER A + PP ++ R ++SI V++K+P GV V +L D +E + PG MGLG D P +VY +TG+GQ GP S AG+D A++G + G PV P + D G L A+G + G+I TG+G +D ++ A + N G + W G+ + Y ++T DG Y+ IG+ Q +A L ++ L E D + H R + KE V L F + +W L E + + + P+ S+ D S + G +E VG ++ GPA R+SK + P GQHT +L + +D I L SG I Sbjct: 36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELLCSGVI 430
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor) HSP 1 Score: 160.229 bits (404), Expect = 9.213e-44 Identity = 124/406 (30.54%), Postives = 190/406 (46.80%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380 M PL+GV+I++L + GPFA M L D+ AEVI+VER A + PP ++ R ++SI V++K+P GV V +L D +E + PG MGLG +D P ++Y +TG+GQ GP S AG+D A++G + G PV P + D G L A+G + G++ TG+G +D ++ A + N G + W G+ + Y ++T DG Y+ IG+ Q +A + ++ L E D + H R + KE V L F + +W L E + + + P+ S+ D S + G +E VG ++ GPA R+SK + P GQHT +L + +D I L SG I Sbjct: 36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLLCSGVI 430
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase) HSP 1 Score: 134.035 bits (336), Expect = 2.314e-34 Identity = 116/400 (29.00%), Postives = 175/400 (43.75%), Query Frame = 0 Query: 3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD-----------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALM-NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSG---LGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-----EVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380 PL V+++EL GPF +L+D AEVI+VE GDP L R ++SI +DL+ PEG V +L+ D ++E FRPG E GLG ++ A NP L+ R++G+GQ GPY AG A+ G G + P +GD A G + + +G+GQVVD + +G ALM +M + G ER N+L AP ++Y T+DG + IG+ + L + G L F +R E A + + +A T D+ +M+ V + + + S PH + R + I ++G + PR S T GQH ++ D G D +A L++ I Sbjct: 9 PLDDVRVLELGAFLAGPFCGQLLADFGAEVIKVEPPGK---GDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGD-SLAATFAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIR-ERTGNILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGEHQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLAMLQAKRVI 402
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase) HSP 1 Score: 124.79 bits (312), Expect = 4.930e-31 Identity = 103/375 (27.47%), Postives = 160/375 (42.67%), Query Frame = 0 Query: 2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDA-------LTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNM-FWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYA--ELLRLSGLGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAP-AAHPGQHTDDVLADF 364 GP +G+ +I++ + GPF +L +M A VI+VE + P D + G+ S+ +DLKN + +++QAD L E FRPG E++G + NP+L+Y +G+G GP A +D A++G + G PV + D GG L + G+ + + G VD AM D + + A G + +R N APF DV+ T D + F A + L L+ L F R + A +K+ + KT+ + W + V AP+LS+ +A P R IE GG+ G + S A P AA QH + + +F Sbjct: 8 GPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFS-GIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATG-KSPQRLGNRHPYMAPF-DVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEF 379
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1084070791|gb|OGK75464.1| (carnitine dehydratase [Candidatus Rokubacteria bacterium GWA2_70_23]) HSP 1 Score: 489.574 bits (1259), Expect = 2.677e-170 Identity = 233/379 (61.48%), Postives = 294/379 (77.57%), Query Frame = 0 Query: 2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380 GPL G+K++E+AGIGPGPF AMML+DM AEV+RV+R++ + G +P K L RGRRS+ VDLKN G+ AV +L+ AD LIEGFRPGV ER+GLGPD+CLA NP+LVYGRMTGWGQ+GP + AAGHDINYIAL+G L IGR G PVPPLNLVGDFGGGGM LAFG+AC ++ A +G GQVVDA+MVDG+A+L +G+RA G W++ERG N+LD+GAP+YDVYE DG YV+IGS+E +FY+EL+RL+GL ++ P Q +++WP ++ + +FK KTRDEWC +ME +DVCFAPVLS +A HPHN RGTF+EV G+ Q PAPRFS+T PA P A PG+HTD+ LAD+GF A IA LR +GA+ Sbjct: 4 GPLAGIKVVEIAGIGPGPFCAMMLADMGAEVLRVDRTAEADIGFAGDPRKSLLNRGRRSVAVDLKNAAGIGAVKRLVAGADALIEGFRPGVMERLGLGPDECLAANPRLVYGRMTGWGQDGPIAHAAGHDINYIALSGVLHAIGRHGGPPVPPLNLVGDFGGGGMYLAFGVACALLEAGRSGRGQVVDASMVDGSASLSTAIFGLRAMGIWSEERGDNLLDSGAPWYDVYEAKDGKYVAIGSLERRFYSELMRLTGL-TADNPPTQWDKTQWPELRARLTAVFKAKTRDEWCAIMEGSDVCFAPVLSYTEALQHPHNRARGTFVEVDGIEQPAPAPRFSRTPPAIQRPPARPGEHTDEALADWGFSAADIAQLRQAGAL 381
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|739707179|ref|WP_037561214.1| (CoA transferase [Alkalispirochaeta odontotermitis] >gi|699058243|gb|KGM43891.1| carnitine dehydratase [Alkalispirochaeta odontotermitis]) HSP 1 Score: 487.263 bits (1253), Expect = 1.672e-169 Identity = 232/380 (61.05%), Postives = 285/380 (75.00%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380 MGPL+GVKIIE GIGPGPF AMMLSDM A+VIR+ER ++ P D + R RRS+ +DL+ PEG VL+++ Q D L EGFRPGV E++GLGP+ CL +NP LVYGRMTGWGQEGP + AAGHDINYI+L GAL G GQ PV PLN+VGDFGGGGMLLAFG+ C + A+ +G GQVVDAAMVDG+AALM MF+G+RA G W DERG N+LD GA FYD YET+DG Y+S+G+IEPQFY LL+ +G+ + DF Q +WPA+KE + ++FKTKTR EWC++ME TD+CFAPVLS+D+A +HPHN ER TF+EV G+ Q P PRFS+T P +P PG+HT VL DFGF A I GL ++GAI Sbjct: 1 MGPLEGVKIIEFGGIGPGPFCAMMLSDMGADVIRIERKGGLS---LTEPKYDVMMRNRRSVSIDLRKPEGAAGVLEMVSQVDALQEGFRPGVMEKLGLGPEVCLEKNPALVYGRMTGWGQEGPLARAAGHDINYISLCGALHTFGPKGQKPVFPLNMVGDFGGGGMLLAFGMICALYEAQKSGRGQVVDAAMVDGSAALMAMFYGLRAAGIWADERGVNLLDGGAHFYDTYETADGKYISVGAIEPQFYQLLLQHAGIKD-PDFGDQLDPKKWPALKEKITDIFKTKTRAEWCQIMEGTDICFAPVLSLDEAPNHPHNRERKTFVEVDGVRQPAPTPRFSRTPPELKSPPPQPGEHTKAVLGDFGFSAAEIEGLETAGAI 376
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1084084525|gb|OGK88303.1| (carnitine dehydratase [Candidatus Rokubacteria bacterium GWC2_70_16]) HSP 1 Score: 486.493 bits (1251), Expect = 4.352e-169 Identity = 231/379 (60.95%), Postives = 293/379 (77.31%), Query Frame = 0 Query: 2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380 GPL G+K++E+AGIGPGPF AMMLSDM AEV+RV+R++ + G +P K L RGRRS+ +DLK+P + AV +L+ AD LIEGFRPGV ER+GLGPD+CLA NP+LVYGRMTGWGQ+GP + AAGHDINYIAL+G L IGR G PVPPLNLVGDFGGGGM LAFGL C ++ A +G GQVVDAAMVDG+A+L +G+RA G W++ERG N+LD+GAP+YDVYET DG YV+IGS+E +FY EL+RL+GL + ++ P Q R++WP ++ +A FK+KTR+EW +ME +DVCFAPVLS +A HPHN RGTF+EV G+ Q PAPRFS+T A P A PG+HT++ L D+GF A IA LR++GA+ Sbjct: 4 GPLAGIKVVEIAGIGPGPFCAMMLSDMGAEVLRVDRTAKADIGFAGDPRKSLLNRGRRSVAIDLKHPAAIAAVKRLVAGADALIEGFRPGVMERLGLGPDECLAVNPRLVYGRMTGWGQDGPMAHAAGHDINYIALSGVLHAIGRRGGPPVPPLNLVGDFGGGGMYLAFGLLCALLEAARSGRGQVVDAAMVDGSASLATAIFGLRALGAWSEERGDNVLDSGAPWYDVYETKDGKYVAIGSLEKRFYGELMRLTGLAD-DNLPKQWDRTQWPELRSRLAATFKSKTREEWRAIMEGSDVCFAPVLSYSEALQHPHNRARGTFVEVDGIEQPAPAPRFSRTPAAIQRPPARPGEHTEEALGDWGFSAADIAALRTAGAL 381
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1162420705|gb|OPX33869.1| (carnitine dehydratase [Desulfobacteraceae bacterium 4484_190.1]) HSP 1 Score: 485.723 bits (1249), Expect = 8.120e-169 Identity = 234/381 (61.42%), Postives = 287/381 (75.33%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381 MGPL GVKIIELAGIGPGPF MMLSDM A+VIRV+R V+G +D L RGRRSI V+LK+PEGVE VLKL E++D L EGFRPGVTER+G+GPD+CLARNP+LVYGRMTGWGQ GP + AAGHDINYI+L+G L IGR + PVPPLNLVGDFGGGGM+LAFG+ C ++ ++ +G+GQV+D AMVDG+AALM MF ++ G ++D+R ++ LD GA FYDVYET DG Y+SIGSIEPQFYA L GL + E + PQ S+WP ++ + +FKT+TRDEWCE+ME TDVCFAPVLS+ +A HPHN R TF+++ GL Q PAPRFS+T P P PGQ TD VL D G + IA L+ GA++ Sbjct: 1 MGPLSGVKIIELAGIGPGPFCGMMLSDMGADVIRVDRPGGVDG------TRDVLCRGRRSIAVNLKSPEGVEVVLKLCEKSDALFEGFRPGVTERLGVGPDECLARNPRLVYGRMTGWGQNGPMAHAAGHDINYISLSGVLHSIGRRDERPVPPLNLVGDFGGGGMMLAFGIVCALLESQKSGKGQVIDTAMVDGSAALMGMFETLQGAGLFSDKRCSHKLDGGAHFYDVYETKDGKYISIGSIEPQFYALLKEKLGL-DSEKYEPQFDTSKWPEWEKDLISIFKTRTRDEWCEIMEGTDVCFAPVLSLKEAPEHPHNKARKTFLDINGLVQHAPAPRFSRTVPDKPKAGRKPGQDTDSVLRDLGICEEEIALLKVRGAVS 374
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1247385437|gb|PCI45467.1| (carnitine dehydratase [Moraxellaceae bacterium]) HSP 1 Score: 485.337 bits (1248), Expect = 9.034e-169 Identity = 232/380 (61.05%), Postives = 287/380 (75.53%), Query Frame = 0 Query: 1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380 MGPL G KIIE+AGIGPGPF MML+DM AEVIRV+RS GG P D L RGRRS+ V+LK+PEG E VL+L E AD + EGFRPGV ER+G+GP++C+ RNPKLVYGRMTGWGQEGP + AAGHDINYI+L+GAL IGR G+ PVPPLNLVGDFGGGGM LAFG+ C ++ A+ + EGQVVDAAMVDG+A+LM+MF+ + G DERGTNMLD FYD YET DG ++S+GSIEPQFY L+ +G+ + E F Q ++WP +K + E+FKTKTRDEWC++ME TDVCFAPVLS+++A +HPHNV R TFIE+ G++Q PAPRFS+T P A GQ TD VL+D+GF + + L+ GA+ Sbjct: 1 MGPLSGYKIIEIAGIGPGPFCGMMLADMGAEVIRVDRSG---GGLGGAIPNDVLNRGRRSVAVNLKSPEGAETVLRLCEGADAIFEGFRPGVAERLGIGPEECMKRNPKLVYGRMTGWGQEGPMAQAAGHDINYISLSGALHGIGRKGERPVPPLNLVGDFGGGGMYLAFGMVCALLEAQKSNEGQVVDAAMVDGSASLMSMFFTFKNMGMHTDERGTNMLDGATHFYDTYETKDGQWISLGSIEPQFYKLLIEKTGV-DAEKFGAQMMTAKWPELKAELTEVFKTKTRDEWCDIMEGTDVCFAPVLSINEAPNHPHNVARQTFIELDGVSQPAPAPRFSRTTPEVRNSARLAGQDTDSVLSDYGFSDEEVKALKEKGAV 376 The following BLAST results are available for this feature:
BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of alpha-methylacyl- racemase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of alpha-methylacyl- racemase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold7547_size3127:11..1156- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold7547_size3127-processed-gene-0.2 ID=snap_masked-scaffold7547_size3127-processed-gene-0.2|Name=alpha-methylacyl- racemase|organism=Tigriopus kingsejongensis|type=gene|length=1146bp|location=Sequence derived from alignment at scaffold7547_size3127:11..1156- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'alpha-methylacyl- racemase' has the following synonyms
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