alpha-methylacyl- racemase, snap_masked-scaffold7547_size3127-processed-gene-0.2 (gene) Tigriopus kingsejongensis

Overview
Namealpha-methylacyl- racemase
Unique Namesnap_masked-scaffold7547_size3127-processed-gene-0.2
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11")

HSP 1 Score: 283.493 bits (724), Expect = 2.197e-93
Identity = 156/385 (40.52%), Postives = 230/385 (59.74%), Query Frame = 0
Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQE-GPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGII--SARSTGEGQVVDAAMVDGAAALMN-MFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD-GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTF-IEVGGLTQAGPAPRFSKT-APATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            L+GV+++E+AG+   PF +M+L+D  A VIRV+     N  D    P D   RG++SI ++LK+ +G   V KL+  +D  +E FRPGV E++ L PD     NP L+Y R++G+GQE  P +  AGHDINYI+L+GAL  IGR  + PVPP+N+VGDFGGGG+  AFG+   +   S  S+G+GQ++D  +  GA+ L   ++        W + RG N+LDTGA FY+VYET + G Y+S+G++EPQFY+ LL    L   E++P      +   +K+  A  F+TKTR EW E+  + D C  PVLS+D+ +S  + + +  F I   G +   PAP+ S+T A  +       G+H+ ++L +  GF    I  L S   I
Sbjct:    3 LKGVRVVEMAGLAXAPFTSMILADFGASVIRVD-----NHPDAVVYP-DVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYP--QFGGDTKKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSS--NELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISEEII 377          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 354.369 bits (908), Expect = 1.300e-119
Identity = 172/376 (45.74%), Postives = 246/376 (65.43%), Query Frame = 0
Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVG-GLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRS 376
            L+GV+++ELAG+ PGPF  M+L+D  AEV+RV R  +          ++ L RG+RS+ +DLK  +GV  + ++  +AD L+E FR GV E++ LGP+  L  NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+D++MV+G A L +  W  +  G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFYA LL+  GL E E+ P Q S ++WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++A  H HN ER +FI  G  L    PAP  S+T PA P+    P  G+HT +VL ++GF  + I  L S
Sbjct:    3 LRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--------ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGL-ESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEILQLHS 368          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 348.206 bits (892), Expect = 3.812e-117
Identity = 174/380 (45.79%), Postives = 246/380 (64.74%), Query Frame = 0
Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-EVGGLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            L+GV+++ELAG+ PGPF  M+L+D  AEV+ V+R  +VN   P++     L RG+RS+ +DLK   G   + ++  +AD L+E FR GV E++ LGP+     NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+DA MV+G A L    W  +A G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFY  LL+  GL E E+ P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL++++A  H HN ERG+FI +        PAP+ S+T PA P+    P  G+HT +VL D+GF  + I  L S   I
Sbjct:    3 LRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVN--HPSH-----LARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGL-ESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRII 373          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 331.257 bits (848), Expect = 1.938e-110
Identity = 165/381 (43.31%), Postives = 235/381 (61.68%), Query Frame = 0
Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED-FPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGL-TQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            LQG+ ++EL+G+ PGPF AM+L+D  A V+RV+R  +             L RG+RS+ +DLK P G   + +L +++D L+E FR GV E++ LGP+     NP+L+Y R++G+GQ G +   AGHDINY+AL+G L  IGR+G+ P  PLNL+ DF GGG++ A G+   +     TG+GQV+DA MV+G A L +  W  +    W   RG NMLD GAPFY  Y T+DG ++++G+IEPQFY  L++  GLG + D  P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++   H HN ERG+FI          PAP    T PA P+    P  G+HT+++L +FGF  + I  L S   I
Sbjct:    3 LQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGS-------RYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIK--GLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNT-PAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKII 373          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component)

HSP 1 Score: 266.929 bits (681), Expect = 2.389e-85
Identity = 146/356 (41.01%), Postives = 204/356 (57.30%), Query Frame = 0
Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLAR-NPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD--GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQ 355
            PL G  ++ELAG+ PGPF  M+L+D  A V+R++         P +P  D L R + SI +DLK+P   + +L ++ +AD LI+ FRPGV ER+GL P + L + N +LV  R+TG+ ++G Y   AGHDINY+A++G L  +GRAG+ P PP N++GDF GGG +   G+   ++S  +TG GQVV+A MVDG+A L  M        FW   RG N+LD G P+Y  Y T D  G Y+++G++EP FY  L+R  GL ++ D PP+  R+ WP ++      F  +TR EW E+ + TD C  PVL                  E G L +AG   R      ATP     PGQ
Sbjct:    8 PLSGKLVVELAGLAPGPFCGMLLADYGASVLRID--------GPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGL-DKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVL------------------EQGELEKAGFEQRLPVNLGATPGKPILPGQ 336          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4)

HSP 1 Score: 197.593 bits (501), Expect = 6.611e-59
Identity = 111/339 (32.74%), Postives = 177/339 (52.21%), Query Frame = 0
Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP-KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPI-GRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIIS-ARSTGEGQVVDAAMVDGAAALMNMFWGMRAN-GFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPR 338
            L G+K++E+AG+ P P   MML+D  A+V  +         D  NP  +  L RG+    +DLKNPE ++ V  L + +D L++ +RPG  E+MGL P      N  L+  +++G+GQ G  S   GHDINY+AL+G L    G     P PP N++ DF GGG+  AFG+   I + + + G+G ++D +M +G A L +           + D+    +     P Y  Y+T D  +V++G++EP+FY  L +L  +  R+ F           + E +   F  KTRD+W  + +  + C  PVL + +  S+  +V+R +F +      A P+PR
Sbjct:    5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVI---------DKKNPAIEQRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNVDGRDLFVNPGK------ITEDLESRFLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 164.851 bits (416), Expect = 1.914e-45
Identity = 119/404 (29.46%), Postives = 195/404 (48.27%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP--------KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSR-SEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            + PL+GVKI++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P+GV+ + +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ +G+   Q +A + ++  L E  D   +   H R      + + ++E F+ +   +W  L E + V + P+ +M +  + P  +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L S+G +
Sbjct:   45 IKPLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG--LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 439          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 161.384 bits (407), Expect = 2.824e-44
Identity = 127/406 (31.28%), Postives = 189/406 (46.55%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG  D     P +VY  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A L ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELLCSGVI 430          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 9.213e-44
Identity = 124/406 (30.54%), Postives = 190/406 (46.80%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G++    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A + ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLLCSGVI 430          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase)

HSP 1 Score: 134.035 bits (336), Expect = 2.314e-34
Identity = 116/400 (29.00%), Postives = 175/400 (43.75%), Query Frame = 0
Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD-----------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALM-NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSG---LGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-----EVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            PL  V+++EL     GPF   +L+D  AEVI+VE       GDP                  L R ++SI +DL+ PEG   V +L+   D ++E FRPG  E  GLG ++  A NP L+  R++G+GQ GPY   AG      A+ G     G   + P      +GD        A G    +   + +G+GQVVD  + +G  ALM +M    +  G    ER  N+L   AP  ++Y T+DG +  IG+     +  L +  G   L     F    +R E  A + + +A      T D+   +M+   V    + +  +  S PH + R + I     ++G +      PR S T           GQH  ++  D  G   D +A L++   I
Sbjct:    9 PLDDVRVLELGAFLAGPFCGQLLADFGAEVIKVEPPGK---GDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGD-SLAATFAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIR-ERTGNILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGEHQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLAMLQAKRVI 402          
BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase)

HSP 1 Score: 124.79 bits (312), Expect = 4.930e-31
Identity = 103/375 (27.47%), Postives = 160/375 (42.67%), Query Frame = 0
Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDA-------LTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNM-FWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYA--ELLRLSGLGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAP-AAHPGQHTDDVLADF 364
            GP +G+ +I++  +  GPF   +L +M A VI+VE     +      P  D        +  G+ S+ +DLKN       + +++QAD L E FRPG  E++G   +     NP+L+Y   +G+G  GP   A  +D    A++G +   G     PV     + D  GG  L + G+   +     +  G  VD AM D   + +        A G  + +R  N     APF DV+ T D         +  F A  + L L+ L     F     R +  A +K+ +    KT+  + W   +    V  AP+LS+ +A   P    R   IE GG+   G   + S  A     P AA   QH + +  +F
Sbjct:    8 GPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFS-GIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATG-KSPQRLGNRHPYMAPF-DVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEF 379          
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1084070791|gb|OGK75464.1| (carnitine dehydratase [Candidatus Rokubacteria bacterium GWA2_70_23])

HSP 1 Score: 489.574 bits (1259), Expect = 2.677e-170
Identity = 233/379 (61.48%), Postives = 294/379 (77.57%), Query Frame = 0
Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G+K++E+AGIGPGPF AMML+DM AEV+RV+R++  + G   +P K  L RGRRS+ VDLKN  G+ AV +L+  AD LIEGFRPGV ER+GLGPD+CLA NP+LVYGRMTGWGQ+GP + AAGHDINYIAL+G L  IGR G  PVPPLNLVGDFGGGGM LAFG+AC ++ A  +G GQVVDA+MVDG+A+L    +G+RA G W++ERG N+LD+GAP+YDVYE  DG YV+IGS+E +FY+EL+RL+GL   ++ P Q  +++WP ++  +  +FK KTRDEWC +ME +DVCFAPVLS  +A  HPHN  RGTF+EV G+ Q  PAPRFS+T PA   P A PG+HTD+ LAD+GF A  IA LR +GA+
Sbjct:    4 GPLAGIKVVEIAGIGPGPFCAMMLADMGAEVLRVDRTAEADIGFAGDPRKSLLNRGRRSVAVDLKNAAGIGAVKRLVAGADALIEGFRPGVMERLGLGPDECLAANPRLVYGRMTGWGQDGPIAHAAGHDINYIALSGVLHAIGRHGGPPVPPLNLVGDFGGGGMYLAFGVACALLEAGRSGRGQVVDASMVDGSASLSTAIFGLRAMGIWSEERGDNLLDSGAPWYDVYEAKDGKYVAIGSLERRFYSELMRLTGL-TADNPPTQWDKTQWPELRARLTAVFKAKTRDEWCAIMEGSDVCFAPVLSYTEALQHPHNRARGTFVEVDGIEQPAPAPRFSRTPPAIQRPPARPGEHTDEALADWGFSAADIAQLRQAGAL 381          
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|739707179|ref|WP_037561214.1| (CoA transferase [Alkalispirochaeta odontotermitis] >gi|699058243|gb|KGM43891.1| carnitine dehydratase [Alkalispirochaeta odontotermitis])

HSP 1 Score: 487.263 bits (1253), Expect = 1.672e-169
Identity = 232/380 (61.05%), Postives = 285/380 (75.00%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            MGPL+GVKIIE  GIGPGPF AMMLSDM A+VIR+ER   ++      P  D + R RRS+ +DL+ PEG   VL+++ Q D L EGFRPGV E++GLGP+ CL +NP LVYGRMTGWGQEGP + AAGHDINYI+L GAL   G  GQ PV PLN+VGDFGGGGMLLAFG+ C +  A+ +G GQVVDAAMVDG+AALM MF+G+RA G W DERG N+LD GA FYD YET+DG Y+S+G+IEPQFY  LL+ +G+ +  DF  Q    +WPA+KE + ++FKTKTR EWC++ME TD+CFAPVLS+D+A +HPHN ER TF+EV G+ Q  P PRFS+T P   +P   PG+HT  VL DFGF A  I GL ++GAI
Sbjct:    1 MGPLEGVKIIEFGGIGPGPFCAMMLSDMGADVIRIERKGGLS---LTEPKYDVMMRNRRSVSIDLRKPEGAAGVLEMVSQVDALQEGFRPGVMEKLGLGPEVCLEKNPALVYGRMTGWGQEGPLARAAGHDINYISLCGALHTFGPKGQKPVFPLNMVGDFGGGGMLLAFGMICALYEAQKSGRGQVVDAAMVDGSAALMAMFYGLRAAGIWADERGVNLLDGGAHFYDTYETADGKYISVGAIEPQFYQLLLQHAGIKD-PDFGDQLDPKKWPALKEKITDIFKTKTRAEWCQIMEGTDICFAPVLSLDEAPNHPHNRERKTFVEVDGVRQPAPTPRFSRTPPELKSPPPQPGEHTKAVLGDFGFSAAEIEGLETAGAI 376          
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1084084525|gb|OGK88303.1| (carnitine dehydratase [Candidatus Rokubacteria bacterium GWC2_70_16])

HSP 1 Score: 486.493 bits (1251), Expect = 4.352e-169
Identity = 231/379 (60.95%), Postives = 293/379 (77.31%), Query Frame = 0
Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G+K++E+AGIGPGPF AMMLSDM AEV+RV+R++  + G   +P K  L RGRRS+ +DLK+P  + AV +L+  AD LIEGFRPGV ER+GLGPD+CLA NP+LVYGRMTGWGQ+GP + AAGHDINYIAL+G L  IGR G  PVPPLNLVGDFGGGGM LAFGL C ++ A  +G GQVVDAAMVDG+A+L    +G+RA G W++ERG N+LD+GAP+YDVYET DG YV+IGS+E +FY EL+RL+GL + ++ P Q  R++WP ++  +A  FK+KTR+EW  +ME +DVCFAPVLS  +A  HPHN  RGTF+EV G+ Q  PAPRFS+T  A   P A PG+HT++ L D+GF A  IA LR++GA+
Sbjct:    4 GPLAGIKVVEIAGIGPGPFCAMMLSDMGAEVLRVDRTAKADIGFAGDPRKSLLNRGRRSVAIDLKHPAAIAAVKRLVAGADALIEGFRPGVMERLGLGPDECLAVNPRLVYGRMTGWGQDGPMAHAAGHDINYIALSGVLHAIGRRGGPPVPPLNLVGDFGGGGMYLAFGLLCALLEAARSGRGQVVDAAMVDGSASLATAIFGLRALGAWSEERGDNVLDSGAPWYDVYETKDGKYVAIGSLEKRFYGELMRLTGLAD-DNLPKQWDRTQWPELRSRLAATFKSKTREEWRAIMEGSDVCFAPVLSYSEALQHPHNRARGTFVEVDGIEQPAPAPRFSRTPAAIQRPPARPGEHTEEALGDWGFSAADIAALRTAGAL 381          
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1162420705|gb|OPX33869.1| (carnitine dehydratase [Desulfobacteraceae bacterium 4484_190.1])

HSP 1 Score: 485.723 bits (1249), Expect = 8.120e-169
Identity = 234/381 (61.42%), Postives = 287/381 (75.33%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPL GVKIIELAGIGPGPF  MMLSDM A+VIRV+R   V+G       +D L RGRRSI V+LK+PEGVE VLKL E++D L EGFRPGVTER+G+GPD+CLARNP+LVYGRMTGWGQ GP + AAGHDINYI+L+G L  IGR  + PVPPLNLVGDFGGGGM+LAFG+ C ++ ++ +G+GQV+D AMVDG+AALM MF  ++  G ++D+R ++ LD GA FYDVYET DG Y+SIGSIEPQFYA L    GL + E + PQ   S+WP  ++ +  +FKT+TRDEWCE+ME TDVCFAPVLS+ +A  HPHN  R TF+++ GL Q  PAPRFS+T P  P     PGQ TD VL D G   + IA L+  GA++
Sbjct:    1 MGPLSGVKIIELAGIGPGPFCGMMLSDMGADVIRVDRPGGVDG------TRDVLCRGRRSIAVNLKSPEGVEVVLKLCEKSDALFEGFRPGVTERLGVGPDECLARNPRLVYGRMTGWGQNGPMAHAAGHDINYISLSGVLHSIGRRDERPVPPLNLVGDFGGGGMMLAFGIVCALLESQKSGKGQVIDTAMVDGSAALMGMFETLQGAGLFSDKRCSHKLDGGAHFYDVYETKDGKYISIGSIEPQFYALLKEKLGL-DSEKYEPQFDTSKWPEWEKDLISIFKTRTRDEWCEIMEGTDVCFAPVLSLKEAPEHPHNKARKTFLDINGLVQHAPAPRFSRTVPDKPKAGRKPGQDTDSVLRDLGICEEEIALLKVRGAVS 374          
BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1247385437|gb|PCI45467.1| (carnitine dehydratase [Moraxellaceae bacterium])

HSP 1 Score: 485.337 bits (1248), Expect = 9.034e-169
Identity = 232/380 (61.05%), Postives = 287/380 (75.53%), Query Frame = 0
Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            MGPL G KIIE+AGIGPGPF  MML+DM AEVIRV+RS    GG     P D L RGRRS+ V+LK+PEG E VL+L E AD + EGFRPGV ER+G+GP++C+ RNPKLVYGRMTGWGQEGP + AAGHDINYI+L+GAL  IGR G+ PVPPLNLVGDFGGGGM LAFG+ C ++ A+ + EGQVVDAAMVDG+A+LM+MF+  +  G   DERGTNMLD    FYD YET DG ++S+GSIEPQFY  L+  +G+ + E F  Q   ++WP +K  + E+FKTKTRDEWC++ME TDVCFAPVLS+++A +HPHNV R TFIE+ G++Q  PAPRFS+T P     A   GQ TD VL+D+GF  + +  L+  GA+
Sbjct:    1 MGPLSGYKIIEIAGIGPGPFCGMMLADMGAEVIRVDRSG---GGLGGAIPNDVLNRGRRSVAVNLKSPEGAETVLRLCEGADAIFEGFRPGVAERLGIGPEECMKRNPKLVYGRMTGWGQEGPMAQAAGHDINYISLSGALHGIGRKGERPVPPLNLVGDFGGGGMYLAFGMVCALLEAQKSNEGQVVDAAMVDGSASLMSMFFTFKNMGMHTDERGTNMLDGATHFYDTYETKDGQWISLGSIEPQFYKLLIEKTGV-DAEKFGAQMMTAKWPELKAELTEVFKTKTRDEWCDIMEGTDVCFAPVLSINEAPNHPHNVARQTFIELDGVSQPAPAPRFSRTTPEVRNSARLAGQDTDSVLSDYGFSDEEVKALKEKGAV 376          
The following BLAST results are available for this feature:
BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000012262.197e-9340.52supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 ... [more]
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BLAST of alpha-methylacyl- racemase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|341940628|sp|O09174.4|AMACR_MOUSE1.300e-11945.74RecName: Full=Alpha-methylacyl-CoA racemase; AltNa... [more]
gi|13637497|sp|P70473.3|AMACR_RAT3.812e-11745.79RecName: Full=Alpha-methylacyl-CoA racemase; AltNa... [more]
gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN1.938e-11043.31RecName: Full=Alpha-methylacyl-CoA racemase; AltNa... [more]
gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH2.389e-8541.01RecName: Full=Isopenicillin N epimerase component ... [more]
gi|29840845|sp|Q09618.3|YS74_CAEEL6.611e-5932.74RecName: Full=CaiB/baiF CoA-transferase family pro... [more]
gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN1.914e-4529.46RecName: Full=Succinate--hydroxymethylglutarate Co... [more]
gi|71152392|sp|Q68FU4.1|SUCHY_RAT2.824e-4431.28RecName: Full=Succinate--hydroxymethylglutarate Co... [more]
gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE9.213e-4430.54RecName: Full=Succinate--hydroxymethylglutarate Co... [more]
gi|667467185|sp|A9WGE3.1|SCCT_CHLAA2.314e-3429.00RecName: Full=Succinyl-CoA--D-citramalate CoA-tran... [more]
gi|19861453|sp|P76518.2|ACOCT_ECOLI4.930e-3127.47RecName: Full=Acetyl-CoA:oxalate CoA-transferase; ... [more]

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BLAST of alpha-methylacyl- racemase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1084070791|gb|OGK75464.1|2.677e-17061.48carnitine dehydratase [Candidatus Rokubacteria bac... [more]
gi|739707179|ref|WP_037561214.1|1.672e-16961.05CoA transferase [Alkalispirochaeta odontotermitis]... [more]
gi|1084084525|gb|OGK88303.1|4.352e-16960.95carnitine dehydratase [Candidatus Rokubacteria bac... [more]
gi|1162420705|gb|OPX33869.1|8.120e-16961.42carnitine dehydratase [Desulfobacteraceae bacteriu... [more]
gi|1247385437|gb|PCI45467.1|9.034e-16961.05carnitine dehydratase [Moraxellaceae bacterium][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold7547_size3127supercontigscaffold7547_size3127:11..1156 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold7547_size3127:11..1156-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold7547_size3127-processed-gene-0.2 ID=snap_masked-scaffold7547_size3127-processed-gene-0.2|Name=alpha-methylacyl- racemase|organism=Tigriopus kingsejongensis|type=gene|length=1146bp|location=Sequence derived from alignment at scaffold7547_size3127:11..1156- (Tigriopus kingsejongensis)
ATGGGTCCATTGCAGGGTGTCAAGATCATCGAGCTCGCCGGAATCGGGCC GGGGCCGTTTGCCGCGATGATGCTGTCCGACATGGACGCCGAGGTGATCA GGGTCGAGCGGTCCTCGGCCGTGAATGGTGGCGACCCGGCCAACCCGCCG AAAGACGCACTGACTCGCGGTCGGCGTTCGATCGGCGTCGACCTCAAGAA TCCCGAGGGTGTCGAAGCCGTGCTCAAGCTCATCGAGCAGGCCGACGGCC TCATCGAGGGATTCCGTCCCGGCGTCACCGAGCGGATGGGTCTCGGACCA GACGACTGTCTCGCGCGGAACCCGAAGCTCGTCTACGGCCGCATGACCGG TTGGGGCCAGGAAGGTCCCTACTCGCTCGCCGCCGGCCACGACATCAACT ACATCGCGTTGGCCGGAGCACTCGAACCCATCGGCCGGGCAGGCCAGGCA CCGGTGCCTCCGCTCAACCTCGTCGGCGACTTCGGCGGTGGCGGCATGCT CCTGGCCTTCGGGCTGGCCTGTGGCATCATCTCCGCCCGTTCCACCGGTG AAGGACAGGTCGTCGATGCGGCGATGGTCGACGGCGCCGCAGCGCTCATG AACATGTTCTGGGGCATGCGGGCCAACGGATTCTGGAATGACGAGCGTGG TACCAACATGCTCGACACCGGTGCGCCGTTCTACGACGTCTACGAGACGT CTGACGGTCTCTACGTCTCGATCGGGTCGATCGAGCCCCAGTTCTACGCC GAGCTGCTGCGGCTCTCCGGTCTCGGTGAGCGTGAGGACTTCCCACCGCA GCACAGCCGGAGCGAGTGGCCCGCCATGAAGGAGACCGTCGCCGAACTGT TCAAGACCAAGACCCGCGACGAGTGGTGCGAGCTCATGGAACACACCGAC GTCTGCTTCGCCCCGGTGCTGTCGATGGACGACGCAGCCAGCCATCCTCA CAACGTCGAGCGGGGGACCTTCATCGAGGTCGGTGGGCTCACCCAGGCCG GACCGGCTCCTCGCTTCTCCAAGACCGCGCCGGCCACACCTGCTCCCGCG GCCCACCCCGGTCAGCACACCGACGACGTCCTCGCCGACTTCGGCTTCGA CGCCGACACGATCGCCGGCCTGCGTTCTTCGGGAGCGATCGCCTAG
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Synonyms
The feature 'alpha-methylacyl- racemase' has the following synonyms
Synonym
Tk10844
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