GL12021, snap_masked-scaffold783_size97670-processed-gene-0.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL12021 vs. L. salmonis genes
Match: EMLSAG00000000017 (supercontig:LSalAtl2s:LSalAtl2s1004:64175:82140:-1 gene:EMLSAG00000000017 transcript:EMLSAT00000000017 description:"maker-LSalAtl2s1004-snap-gene-0.26") HSP 1 Score: 279.641 bits (714), Expect = 4.078e-83 Identity = 205/418 (49.04%), Postives = 247/418 (59.09%), Query Frame = 0 Query: 126 RQFSVSSEIPTSDERTCAVGGSYGKHYASNYNAGGGSYSAGGDPAYARSHVIPSSIPPSNSAVYGSRVSTSTAGTSRSNPLTLGRSLQLVTSGSSVGGVDGSAGSGGVLAGGGGGTEASRRKKTVRFN-SEEWGSNNGAPSSHHHSLNNPYLNCDDFEEEEDLWMTIEDVRCGRWARWDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIH-KKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLL-VGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAGGPLTSVNNHVVDIGRQPLLADPLHGRYPPGRGPPARSTGGP--GRPSVTLSDPLGDTHMLNHLSTG--SRSSGTRIQV 536 RQ+S+SSE+PT+ SYG+ N GS S+ P S V+ SR+ TSTA +S + + G GG LA G G + RKKTVRF+ +EEW SN + SS L+ PY +E WMTIEDV GRWA WD +RQESQES TRDSGIET SCFTSSEDSNRGD H KKHPVSW DG RL+GHMIL K+LKEG+ SS+A+LLG+KV+GGKLL + N GA++EKVKKGS+AD+IG +LPGDE+LEWNG SL KTY+EVHD+I++SRHD QVELRV R PL S D+GR + + G + R PA G RPSVT+SDPLGDTHML S S+ S TRIQV Sbjct: 83 RQYSLSSELPTT---------SYGRQ--QNSYISSGSSSSRHHP----------------SLVHQSRIETSTASSSEQH-----------------RNIASGGGGGGGLATGIGAPTTTTRKKTVRFDPTEEWTSNRPSNSS---PLHRPYHQQTPAPDE---WMTIEDVESGRWAHWDTIRQESQESATRDSGIETSSCFTSSEDSNRGDQFHFKKHPVSWQ--QDGPRLVGHMILQKNLKEGYGSSSTASLLGVKVVGGKLLPITNHYGAIVEKVKKGSVADTIGHLLPGDEVLEWNGHSLVGKTYEEVHDIISDSRHDSQVELRVSR---------SRPLPS------DMGRSAV--NNTSGGFVHAR--PANPYGRKYMERPSVTISDPLGDTHMLRSHSPSNLSQPSATRIQV 429
BLAST of GL12021 vs. SwissProt
Match: gi|34395823|sp|Q9EQZ7.1|RIMS2_MOUSE (RecName: Full=Regulating synaptic membrane exocytosis protein 2; AltName: Full=Rab-3-interacting molecule 2; Short=RIM 2; AltName: Full=Rab-3-interacting protein 2) HSP 1 Score: 153.68 bits (387), Expect = 4.235e-38 Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 0 Query: 311 ESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 E Q +DSG++T S T +E+ + D KHPV+W PS DG RL+G ++L K LK+G VP S +LG+KV+GGK+ R+ A I KVKKGS+AD++G + PGDE+LEWNGR L T++EV+++I ES+ +PQVEL V R +G+ Sbjct: 626 EPQIKDSGVDTCSSTTLNEEHSHSD----KHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGD 767
BLAST of GL12021 vs. SwissProt
Match: gi|41019522|sp|Q9UQ26.2|RIMS2_HUMAN (RecName: Full=Regulating synaptic membrane exocytosis protein 2; AltName: Full=Rab-3-interacting molecule 2; Short=RIM 2; AltName: Full=Rab-3-interacting protein 3) HSP 1 Score: 153.68 bits (387), Expect = 4.364e-38 Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 0 Query: 311 ESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 E Q +DSG++T S T +E+ + D KHPV+W PS DG RL+G ++L K LK+G VP S +LG+KV+GGK+ R+ A I KVKKGS+AD++G + PGDE+LEWNGR L T++EV+++I ES+ +PQVEL V R +G+ Sbjct: 617 EPQIKDSGVDTCSSTTLNEEHSHSD----KHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGD 758
BLAST of GL12021 vs. SwissProt
Match: gi|34395746|sp|Q9JIS1.1|RIMS2_RAT (RecName: Full=Regulating synaptic membrane exocytosis protein 2; AltName: Full=Rab-3-interacting molecule 2; Short=RIM 2) HSP 1 Score: 140.198 bits (352), Expect = 1.176e-33 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 0 Query: 341 HPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 HPV+W PS DG RL+G ++L K LK+G VP S +LG+KV+GGK+ R+ A I KVKKGS+AD++G + PGDE+LEWNGR L T++EV+++I ES+ +PQVEL V R +G+ Sbjct: 565 HPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGD 680
BLAST of GL12021 vs. SwissProt
Match: gi|34395745|sp|Q9JIR4.1|RIMS1_RAT (RecName: Full=Regulating synaptic membrane exocytosis protein 1; AltName: Full=Rab-3-interacting molecule 1; Short=RIM 1) HSP 1 Score: 120.553 bits (301), Expect = 2.928e-27 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0 Query: 341 HPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 HPV+W PS +G RL+G +IL K +P S LLG+KV+GGK+ R+GA I KVKKGS+AD +G + GDE+LEWNG+ L T +EV+++I ES+ +PQVE+ V R +G+ Sbjct: 597 HPVTWQPSKEGDRLIGRVILNK---RTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD 709
BLAST of GL12021 vs. SwissProt
Match: gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN (RecName: Full=Regulating synaptic membrane exocytosis protein 1; AltName: Full=Rab-3-interacting molecule 1; Short=RIM 1; AltName: Full=Rab-3-interacting protein 2) HSP 1 Score: 120.553 bits (301), Expect = 3.138e-27 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0 Query: 341 HPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 HPV+W PS +G RL+G +IL K +P S LLG+KV+GGK+ R+GA I KVKKGS+AD +G + GDE+LEWNG+ L T +EV+++I ES+ +PQVE+ V R +G+ Sbjct: 583 HPVTWQPSKEGDRLIGRVILNK---RTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD 695
BLAST of GL12021 vs. SwissProt
Match: gi|122065961|sp|Q99NE5.2|RIMS1_MOUSE (RecName: Full=Regulating synaptic membrane exocytosis protein 1; AltName: Full=Rab-3-interacting molecule 1; Short=RIM 1; AltName: Full=Rab-3-interacting protein 1) HSP 1 Score: 120.168 bits (300), Expect = 3.506e-27 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0 Query: 341 HPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGN 456 HPV+W PS +G RL+G +IL K +P S LLG+KV+GGK+ R+GA I KVKKGS+AD +G + GDE+LEWNG+ L T +EV+++I ES+ +PQVE+ V R +G+ Sbjct: 418 HPVTWQPSKEGDRLIGRVILNK---RTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD 530
BLAST of GL12021 vs. SwissProt
Match: gi|41017531|sp|Q22366.2|RIM_CAEEL (RecName: Full=Rab-3-interacting molecule unc-10; Short=Rim; AltName: Full=Uncoordinated protein 10) HSP 1 Score: 120.168 bits (300), Expect = 3.825e-27 Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = 0 Query: 341 HPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCR 452 HPV+W PSAD +L+GHMIL ++ S++ LG+K++GG+ ++GA I +VK GS+AD+IGR+ PGDE++EWNG+SL N TY++V+D IA SR+D VEL V R Sbjct: 627 HPVTWQPSADQKKLIGHMILHRTEN-----SAANGDLGLKIVGGRRTDTGKLGAFITQVKPGSVADTIGRLRPGDEVVEWNGQSLQNATYEQVYDSIAASRYDTSVELIVSR 733
BLAST of GL12021 vs. SwissProt
Match: gi|1375631288|sp|Q9Y6V0.5|PCLO_HUMAN (RecName: Full=Protein piccolo; AltName: Full=Aczonin) HSP 1 Score: 65.0846 bits (157), Expect = 1.319e-9 Identity = 30/76 (39.47%), Postives = 52/76 (68.42%), Query Frame = 0 Query: 377 LGIKVIGGKLLVGN--RIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRV 450 LGI+++GGK + G+ IGA I K+ G A+ G+++ G ++LEWNG LT+KTY+EV +I++ + ++ +R+ Sbjct: 4513 LGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRL 4588
BLAST of GL12021 vs. SwissProt
Match: gi|24212083|sp|Q9PU36.1|PCLO_CHICK (RecName: Full=Protein piccolo; AltName: Full=Aczonin) HSP 1 Score: 63.5438 bits (153), Expect = 3.133e-9 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = 0 Query: 377 LGIKVIGGKLLVGN--RIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRV 450 LGI+V+GGK + G+ IGA I KV G A+ G+++ G ++LEWNG LT KTY+EV ++I + + ++ +R+ Sbjct: 4431 LGIRVVGGKEIPGSSGEIGAYIAKVLPGGNAEQTGKLIEGMQVLEWNGIPLTGKTYEEVQNIIIQQCGEAEICVRL 4506
BLAST of GL12021 vs. SwissProt
Match: gi|24212076|sp|Q9JKS6.1|PCLO_RAT (RecName: Full=Protein piccolo; AltName: Full=Aczonin; AltName: Full=Multidomain presynaptic cytomatrix protein) HSP 1 Score: 62.3882 bits (150), Expect = 8.032e-9 Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 377 LGIKVIGGKLLVGN--RIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRV 450 LGI+++GGK + G+ IGA I K+ G A+ G ++ G ++LEWNG LT+KTY+EV +I + + ++ +R+ Sbjct: 4459 LGIRIVGGKEIPGHSGEIGAYIAKILPGESAEHTGPLMEGMQVLEWNGVPLTSKTYEEVQSIINQQSGEAEICVRL 4534
BLAST of GL12021 vs. nr
Match: gi|1069693664|ref|XP_018306488.1| (PREDICTED: regulating synaptic membrane exocytosis protein 2 isoform X3 [Trachymyrmex zeteki]) HSP 1 Score: 176.792 bits (447), Expect = 2.026e-43 Identity = 106/220 (48.18%), Postives = 137/220 (62.27%), Query Frame = 0 Query: 245 RRKKTVRFNSEEWGSNNGAPSSHHHSLNNPYLNCDDFEEEEDLWMTIEDVRCGRWARWDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAGGP 464 R KKTVRF+ G+N G P +EEE W+ W+A RQ SQ+S T+DSGI+T S FTSSEDSNRGD KHP+SW S DG +++GHM+L KS G S +++LG+KV+GGKLL +GA+IEKVKKGS AD G++ PGDE++ WNGRSL K++ EV+D+IAESR +PQ+EL V R L + GP Sbjct: 430 RGKKTVRFDG---GTNVGGP-----------------QEEE-------------WS-WEADRQGSQDSATKDSGIDTSSTFTSSEDSNRGDL--PKHPLSWQASEDGQKIIGHMVLRKSAGSG----SCSSILGLKVVGGKLLEDGSMGALIEKVKKGSTADVEGQLRPGDEVIAWNGRSLQGKSFREVYDIIAESRLEPQIELIVERKLSTMGMAPAGP 609
BLAST of GL12021 vs. nr
Match: gi|998508667|ref|XP_015514719.1| (PREDICTED: regulating synaptic membrane exocytosis protein 2-like [Neodiprion lecontei]) HSP 1 Score: 176.407 bits (446), Expect = 3.321e-43 Identity = 97/169 (57.40%), Postives = 124/169 (73.37%), Query Frame = 0 Query: 299 WARWDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAGGPLTS 467 W+ W+A RQ SQ+S T+DSGI+T S FTSSEDSNRGD KHP+ W S+DG +++GHMIL KS G SS+++LG+KV+GGKLL GA+IEKVKKGS AD G++ PGDE++EWNGRSL K+Y EV+D+IAESR +PQVEL V R LG + GP ++ Sbjct: 458 WS-WEADRQGSQDSATKDSGIDTSSTFTSSEDSNRGDL--PKHPLLWQVSSDGQKMIGHMILRKSQGAGS--GSSSSILGLKVVGGKLLENGSRGALIEKVKKGSTADLEGQLRPGDEVIEWNGRSLQAKSYQEVYDIIAESRQEPQVELIVSRSLGTAPTNLPGPTSA 621
BLAST of GL12021 vs. nr
Match: gi|1009381704|gb|KYN04559.1| (Regulating synaptic membrane exocytosis protein 2 [Cyphomyrmex costatus]) HSP 1 Score: 174.866 bits (442), Expect = 9.775e-43 Identity = 108/220 (49.09%), Postives = 136/220 (61.82%), Query Frame = 0 Query: 245 RRKKTVRFNSEEWGSNNGAPSSHHHSLNNPYLNCDDFEEEEDLWMTIEDVRCGRWARWDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAGGP 464 R KKTVRF+ G+N G P +EEE W+ W+A RQ SQ+S T+DSGI+T S FTSSEDSNRGD KHP SW S DG +L+GHM+L KS G S +++LG+KV+GGKLL +GA+IEKVKKGS AD G++ PGDE++ WNGRSL +K++ EV D+IAESR DPQ+EL V R L + GP Sbjct: 319 RGKKTVRFDG---GTNVGGP-----------------QEEE-------------WS-WEADRQGSQDSATKDSGIDTSSTFTSSEDSNRGDL--PKHP-SWQVSEDGQKLIGHMVLRKSAGSG----SCSSILGLKVVGGKLLEDGSMGALIEKVKKGSTADVEGQLRPGDEVIAWNGRSLQSKSFREVSDIIAESRLDPQIELVVERKLSTTGMAPAGP 497
BLAST of GL12021 vs. nr
Match: gi|1134644239|ref|XP_019890115.1| (PREDICTED: regulating synaptic membrane exocytosis protein 1 isoform X6 [Ooceraea biroi]) HSP 1 Score: 174.481 bits (441), Expect = 1.298e-42 Identity = 97/171 (56.73%), Postives = 125/171 (73.10%), Query Frame = 0 Query: 299 WARWDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAG-GPLTSV 468 W+ W+A RQ SQ+S T+DSGI+T S FTSSEDSNRGD KHP+SW S +G +L+GHM+L KS SS+++LG+KV+GGKLL +GAVIEKVK+GS AD G++ PGDE++EWNGRSL K++ EV+D+IAESR +PQ+EL V R L G AG GP T + Sbjct: 445 WS-WEADRQGSQDSATKDSGIDTSSTFTSSEDSNRGDL--PKHPLSWQMSENGQKLIGHMVLRKSAGS----GSSSSILGLKVVGGKLLEDGSMGAVIEKVKRGSTADIEGQLRPGDEVIEWNGRSLQGKSFREVYDIIAESREEPQIELVVERKLSTGMLPAGPGPSTPI 608
BLAST of GL12021 vs. nr
Match: gi|607366025|gb|EZA60196.1| (Regulating synaptic membrane exocytosis protein [Ooceraea biroi]) HSP 1 Score: 174.481 bits (441), Expect = 1.600e-42 Identity = 96/173 (55.49%), Postives = 125/173 (72.25%), Query Frame = 0 Query: 302 WDALRQESQESQTRDSGIETGSCFTSSEDSNRGDYIHKKHPVSWHPSADGGRLMGHMILLKSLKEGFVPSSSATLLGIKVIGGKLLVGNRIGAVIEKVKKGSIADSIGRVLPGDEILEWNGRSLTNKTYDEVHDVIAESRHDPQVELRVCRYLGNGAGSAG-GPLTSVNNHVV 473 W+A RQ SQ+S T+DSGI+T S FTSSEDSNRGD KHP+SW S +G +L+GHM+L KS SS+++LG+KV+GGKLL +GAVIEKVK+GS AD G++ PGDE++EWNGRSL K++ EV+D+IAESR +PQ+EL V R L G AG GP T + + + Sbjct: 683 WEADRQGSQDSATKDSGIDTSSTFTSSEDSNRGDL--PKHPLSWQMSENGQKLIGHMVLRKSAGS----GSSSSILGLKVVGGKLLEDGSMGAVIEKVKRGSTADIEGQLRPGDEVIEWNGRSLQGKSFREVYDIIAESREEPQIELVVERKLSTGMLPAGPGPSTPIASRRI 849 The following BLAST results are available for this feature:
BLAST of GL12021 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of GL12021 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 11
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BLAST of GL12021 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold783_size97670:90958..93415- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold783_size97670-processed-gene-0.16 ID=snap_masked-scaffold783_size97670-processed-gene-0.16|Name=GL12021|organism=Tigriopus kingsejongensis|type=gene|length=2458bp|location=Sequence derived from alignment at scaffold783_size97670:90958..93415- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL12021' has the following synonyms
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