histone h2a-like, snap_masked-scaffold791_size96783-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000012511 (supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-1 gene:EMLSAG00000012511 transcript:EMLSAT00000012511 description:"maker-LSalAtl2s921-augustus-gene-1.59") HSP 1 Score: 176.792 bits (447), Expect = 6.932e-55 Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0 Query: 17 RSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRI 125 RSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAA +EYLAAE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ES ++ Sbjct: 27 RSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAXLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSESSKV 135
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000005641 (supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1 gene:EMLSAG00000005641 transcript:EMLSAT00000005641 description:"maker-LSalAtl2s303-augustus-gene-3.23") HSP 1 Score: 187.193 bits (474), Expect = 2.114e-52 Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 0 Query: 16 SRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKK 119 SR SRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL G TIA GG LPNIQA+L KK Sbjct: 576 SRXSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGXTIAQGGXLPNIQALLFLKK 679
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000001108 (supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 gene:EMLSAG00000001108 transcript:EMLSAT00000001108 description:"augustus_masked-LSalAtl2s1185-processed-gene-0.1") HSP 1 Score: 167.933 bits (424), Expect = 1.284e-51 Identity = 107/121 (88.43%), Postives = 110/121 (90.91%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAV E LAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GV IA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVXEXLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVXIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000008130 (supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-1 gene:EMLSAG00000008130 transcript:EMLSAT00000008130 description:"augustus_masked-LSalAtl2s484-processed-gene-3.0") HSP 1 Score: 147.902 bits (372), Expect = 8.728e-44 Identity = 76/119 (63.87%), Postives = 81/119 (68.07%), Query Frame = 0 Query: 3 ARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 + GKGG SK SSR GLQ PVGR HR LRKG YAE VGA PVYLAAVM L EVLE GN + DN RI+PRHL LAIRNDEEL KLL +I G + PNI AVLLPKK E Sbjct: 16 SSGKGGNVGGDSKYCSSRTGLQLPVGRFHRFLRKGYYAESVGANTPVYLAAVMYCLTTEVLESXGNXSCDNTNTRIIPRHLLLAIRNDEELKKLLASXSILQGSIXPNIXAVLLPKKNE 134
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000007561 (supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1 gene:EMLSAG00000007561 transcript:EMLSAT00000007561 description:"augustus_masked-LSalAtl2s436-processed-gene-4.1") HSP 1 Score: 139.813 bits (351), Expect = 1.967e-41 Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = 0 Query: 43 VGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 +GAGAPVYLAAVME LAAEVLELAGNAA DNK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLL KKTE Sbjct: 1 MGAGAPVYLAAVMEXLAAEVLELAGNAARDNKXTRIIPRHLQLAIRNDEELNKLLVGVTIAQGGVLPNIQAVLLSKKTE 79
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000003537 (supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-1 gene:EMLSAG00000003537 transcript:EMLSAT00000003537 description:"augustus-LSalAtl2s193-processed-gene-3.2") HSP 1 Score: 121.709 bits (304), Expect = 1.667e-33 Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 0 Query: 35 RKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 RKG+Y E VGAGAP+YL AV+EYLAAEVLEL GNAA D++KARI HLQL I ND ELNKLL G TIA GGVLPNIQAV P K + Sbjct: 75 RKGNYTECVGAGAPIYLTAVIEYLAAEVLELVGNAARDDRKARIFTLHLQLVICNDGELNKLLAGETIAQGGVLPNIQAVTWPYKMD 161
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000001981 (supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 gene:EMLSAG00000001981 transcript:EMLSAT00000001981 description:"augustus_masked-LSalAtl2s1352-processed-gene-0.2") HSP 1 Score: 120.168 bits (300), Expect = 6.402e-33 Identity = 73/147 (49.66%), Postives = 87/147 (59.18%), Query Frame = 0 Query: 8 GKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAE-RVGAGAPVYLAAVMEYLAAE--------------------------------VLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 GKAK + SRS+RAGLQFPVGRIHR L+ + + RVGA A VY AA++E L AE VLELAGNA+ D K RI PRHLQLAIR DEEL+ L++ TIAGGGV+P+I L+ KK E Sbjct: 11 GKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEXLTAEXIAMIIMIDKYYSLKDIAIIFILFNSSTFIHQVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIK-ATIAGGGVIPHIHKSLIGKKGE 156
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000008824 (supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1 gene:EMLSAG00000008824 transcript:EMLSAT00000008824 description:"snap_masked-LSalAtl2s54-processed-gene-2.1") HSP 1 Score: 107.071 bits (266), Expect = 9.654e-29 Identity = 57/93 (61.29%), Postives = 67/93 (72.04%), Query Frame = 0 Query: 29 RIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 +I RLLRK + ER+GAG +YL AVMEYLAAEVLELAGNAA DN+K RI+ HLQL I NDE+L K+L TI G +L NIQ V + K E Sbjct: 15 KIDRLLRKINSGERIGAGTSIYLVAVMEYLAAEVLELAGNAAHDNRKTRIIYIHLQLVICNDEKLYKML-ATTITKGVILHNIQTVFIYKNNE 106
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000003259 (supercontig:LSalAtl2s:LSalAtl2s1791:770:1305:-1 gene:EMLSAG00000003259 transcript:EMLSAT00000003259 description:"snap_masked-LSalAtl2s1791-processed-gene-0.2") HSP 1 Score: 101.679 bits (252), Expect = 4.464e-27 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 Query: 16 SRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLEL 65 SRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLE Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEF 65
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000012597 (supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-1 gene:EMLSAG00000012597 transcript:EMLSAT00000012597 description:"augustus_masked-LSalAtl2s944-processed-gene-0.3") HSP 1 Score: 98.5969 bits (244), Expect = 7.192e-26 Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKAR 77 M +GKG KAK S+S SSR GLQF V RIHRLLRK S +RVGAGA VYL V EYL AE+LE+ N A DNKK R Sbjct: 1 MRGQGKGSKAKGKSRSCSSRDGLQFSVKRIHRLLRKDSTTDRVGAGAFVYLVVVQEYLTAEILEMVENTARDNKKTR 77
BLAST of histone h2a-like vs. SwissProt
Match: gi|75075512|sp|Q4R3X5.1|H2AJ_MACFA (RecName: Full=Histone H2A.J; Short=H2a/j) HSP 1 Score: 212.616 bits (540), Expect = 1.540e-67 Identity = 106/129 (82.17%), Postives = 114/129 (88.37%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKK 128 MS RGK GGK + +KSRSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES + K Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQKAKSK 129
BLAST of histone h2a-like vs. SwissProt
Match: gi|74749897|sp|Q7L7L0.3|H2A3_HUMAN (RecName: Full=Histone H2A type 3 >gi|81895946|sp|Q8BFU2.3|H2A3_MOUSE RecName: Full=Histone H2A type 3 >gi|90101452|sp|Q4FZT6.3|H2A3_RAT RecName: Full=Histone H2A type 3) HSP 1 Score: 212.616 bits (540), Expect = 1.717e-67 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKG+Y+ERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|82191289|sp|P70082.1|H2AJ_CHICK (RecName: Full=Histone H2A.J; Short=H2a/j; AltName: Full=Histone H2A-IX) HSP 1 Score: 212.231 bits (539), Expect = 2.645e-67 Identity = 105/129 (81.40%), Postives = 114/129 (88.37%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKK 128 MS RGK GGK + +KSRSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVY+AAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES + K Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKSK 129
BLAST of histone h2a-like vs. SwissProt
Match: gi|121978|sp|P20671.2|H2A1D_HUMAN (RecName: Full=Histone H2A type 1-D; AltName: Full=Histone H2A.3; AltName: Full=Histone H2A/g) HSP 1 Score: 212.231 bits (539), Expect = 3.046e-67 Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+Y+ERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|81871239|sp|Q8CGP6.3|H2A1H_MOUSE (RecName: Full=Histone H2A type 1-H) HSP 1 Score: 211.46 bits (537), Expect = 4.120e-67 Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+Y+ERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. nr
Match: gi|662208256|ref|XP_008477669.1| (PREDICTED: histone H2A-like [Diaphorina citri] >gi|662217518|ref|XP_008482742.1| PREDICTED: histone H2A-like [Diaphorina citri]) HSP 1 Score: 226.098 bits (575), Expect = 2.550e-70 Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGKAK SK+RSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1121115134|ref|XP_019547106.1| (PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115142|ref|XP_019547109.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115145|ref|XP_019547110.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1000212002|gb|KXJ81677.1| hypothetical protein RP20_CCG018287 [Aedes albopictus]) HSP 1 Score: 224.557 bits (571), Expect = 1.114e-69 Identity = 110/121 (90.91%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGKA+ +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKARVKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1173884044|gb|OQR68116.1| (histone H3-like [Tropilaelaps mercedesae] >gi|1173884315|gb|OQR68149.1| histone H3-like [Tropilaelaps mercedesae]) HSP 1 Score: 223.787 bits (569), Expect = 2.043e-69 Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK+K +K+RSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKSKTKAKTRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|755929542|ref|XP_011311067.1| (PREDICTED: histone H2A-like [Fopius arisanus] >gi|755930864|ref|XP_011313789.1| PREDICTED: histone H2A-like [Fopius arisanus]) HSP 1 Score: 223.787 bits (569), Expect = 2.430e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +K+RSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1048031409|ref|XP_017489640.1| (PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1048046021|ref|XP_017494516.1| PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1048057783|ref|XP_017462204.1| PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1191617904|gb|OTF82047.1| histone H2A-like protein [Euroglyphus maynei]) HSP 1 Score: 223.402 bits (568), Expect = 2.455e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1105063696|emb|CRG62825.1| (histone H2A [Clunio marinus] >gi|1108464816|emb|CRL07053.1| CLUMA_CG019991, isoform A [Clunio marinus]) HSP 1 Score: 223.402 bits (568), Expect = 3.017e-69 Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLLRKG YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGDYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1191588083|gb|OTF76922.1| (hypothetical protein BLA29_012503 [Euroglyphus maynei]) HSP 1 Score: 223.402 bits (568), Expect = 3.184e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKTKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus]) HSP 1 Score: 223.402 bits (568), Expect = 3.326e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|162319741|gb|ABX84387.1| (histone H2A, partial [Penaeus monodon]) HSP 1 Score: 223.016 bits (567), Expect = 3.745e-69 Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RG GGK K SKSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGNGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1067075681|ref|XP_018021394.1| (PREDICTED: histone H2A-like [Hyalella azteca]) HSP 1 Score: 223.402 bits (568), Expect = 3.850e-69 Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKKIEMQTK 134 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLL+KG+YA+RVGAGAPVYLAAVMEYL+AE+LELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE+ + K++ Q++ Sbjct: 1 MSGRGKGGKTKSKAKSRSNRAGLQFPVGRIHRLLKKGNYADRVGAGAPVYLAAVMEYLSAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTETKSTVGKVKSQSQ 134 The following BLAST results are available for this feature:
BLAST of histone h2a-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 14
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BLAST of histone h2a-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone h2a-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold791_size96783:27129..34022+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold791_size96783-processed-gene-0.4 ID=snap_masked-scaffold791_size96783-processed-gene-0.4|Name=histone h2a-like|organism=Tigriopus kingsejongensis|type=gene|length=6894bp|location=Sequence derived from alignment at scaffold791_size96783:27129..34022+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h2a-like' has the following synonyms
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