histone h2a-like, snap_masked-scaffold791_size96783-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000011020 (supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-1 gene:EMLSAG00000011020 transcript:EMLSAT00000011020 description:"snap_masked-LSalAtl2s741-processed-gene-2.19") HSP 1 Score: 75.0998 bits (183), Expect = 2.827e-17 Identity = 42/66 (63.64%), Postives = 46/66 (69.70%), Query Frame = 0 Query: 54 VMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKK 119 + YL EVLEL GN KK I+ HLQLAIR D+EL KLL GVTIA G+L NIQAVLLPKK Sbjct: 16 IQTYLTHEVLELPGNY----KKTHIIHCHLQLAIRRDKELKKLLAGVTIAHCGILHNIQAVLLPKK 77
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000003961 (supercontig:LSalAtl2s:LSalAtl2s2120:1961:2668:-1 gene:EMLSAG00000003961 transcript:EMLSAT00000003961 description:"snap-LSalAtl2s2120-processed-gene-0.8") HSP 1 Score: 61.2326 bits (147), Expect = 2.725e-12 Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 18 SSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLE 64 SSR LQF IHRL+RK +Y ER+G+GAPVY+ A++EY+ AE+L+ Sbjct: 46 SSRTALQFLAVYIHRLVRKDNYIERLGSGAPVYIEALLEYIGAEILQ 92
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000012218 (supercontig:LSalAtl2s:LSalAtl2s887:424407:426072:-1 gene:EMLSAG00000012218 transcript:EMLSAT00000012218 description:"snap-LSalAtl2s887-processed-gene-4.11") HSP 1 Score: 59.6918 bits (143), Expect = 5.120e-12 Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0 Query: 35 RKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKK 75 RKG+YAERVG+ A VYL AVME +A E+LEL NAA DNKK Sbjct: 16 RKGNYAERVGSDALVYLVAVMECIAPELLELTSNAARDNKK 56
BLAST of histone h2a-like vs. L. salmonis genes
Match: EMLSAG00000000432 (supercontig:LSalAtl2s:LSalAtl2s1068:354081:357686:1 gene:EMLSAG00000000432 transcript:EMLSAT00000000432 description:"snap_masked-LSalAtl2s1068-processed-gene-3.12") HSP 1 Score: 47.7506 bits (112), Expect = 1.124e-7 Identity = 29/61 (47.54%), Postives = 34/61 (55.74%), Query Frame = 0 Query: 20 RAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVP 80 RAGLQFPV RIHRLLRKG+Y +A M+YL A+V+ N NKK P Sbjct: 24 RAGLQFPVRRIHRLLRKGNY------------SATMKYLTAQVMYCCRN----NKKTPSSP 68
BLAST of histone h2a-like vs. SwissProt
Match: gi|122000|sp|P02263.2|H2A4_CHICK (RecName: Full=Histone H2A-IV) HSP 1 Score: 213.772 bits (543), Expect = 6.624e-68 Identity = 106/129 (82.17%), Postives = 115/129 (89.15%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKK 128 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKT+S + K Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHKAKAK 129
BLAST of histone h2a-like vs. SwissProt
Match: gi|74757558|sp|Q6FI13.3|H2A2A_HUMAN (RecName: Full=Histone H2A type 2-A; AltName: Full=Histone H2A.2; AltName: Full=Histone H2A/o >gi|81910974|sp|Q6GSS7.3|H2A2A_MOUSE RecName: Full=Histone H2A type 2-A; AltName: Full=H2a-614; AltName: Full=H2a-615; AltName: Full=Histone H2A.2 >gi|281312197|sp|P0CC09.1|H2A2A_RAT RecName: Full=Histone H2A type 2-A; AltName: Full=Histone H2A.2) HSP 1 Score: 213.386 bits (542), Expect = 8.407e-68 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVY+AAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|83288405|sp|P0C0S9.2|H2A1_BOVIN (RecName: Full=Histone H2A type 1; AltName: Full=H2A.1b >gi|83288406|sp|P0C0S8.2|H2A1_HUMAN RecName: Full=Histone H2A type 1; Short=H2A.1; AltName: Full=Histone H2A/ptl) HSP 1 Score: 213.386 bits (542), Expect = 8.591e-68 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|462233|sp|P35061.2|H2A_ACRFO (RecName: Full=Histone H2A) HSP 1 Score: 213.001 bits (541), Expect = 9.456e-68 Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDR 124 MS RGKG SKSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVY+AAV+EYL+AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE + Sbjct: 1 MSGRGKGKAQGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKKQ 124
BLAST of histone h2a-like vs. SwissProt
Match: gi|74751984|sp|Q96KK5.3|H2A1H_HUMAN (RecName: Full=Histone H2A type 1-H; AltName: Full=Histone H2A/s) HSP 1 Score: 213.001 bits (541), Expect = 1.032e-67 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|12585257|sp|Q99878.3|H2A1J_HUMAN (RecName: Full=Histone H2A type 1-J; AltName: Full=Histone H2A/e) HSP 1 Score: 213.001 bits (541), Expect = 1.066e-67 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|121966|sp|P06897.2|H2A1_XENLA (RecName: Full=Histone H2A type 1) HSP 1 Score: 213.001 bits (541), Expect = 1.201e-67 Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILK 127 MS RGK GGK + +K+RSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQ+VLLPKKTES + K Sbjct: 1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTESAKSAK 128
BLAST of histone h2a-like vs. SwissProt
Match: gi|74733131|sp|Q9BTM1.1|H2AJ_HUMAN (RecName: Full=Histone H2A.J; Short=H2a/j >gi|122143023|sp|Q3ZBX9.1|H2AJ_BOVIN RecName: Full=Histone H2A.J; Short=H2a/j) HSP 1 Score: 213.001 bits (541), Expect = 1.282e-67 Identity = 106/129 (82.17%), Postives = 114/129 (88.37%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKK 128 MS RGK GGK + +KSRSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES + K Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQKTKSK 129
BLAST of histone h2a-like vs. SwissProt
Match: gi|90101450|sp|P0C170.2|H2A1E_RAT (RecName: Full=Histone H2A type 1-E) HSP 1 Score: 213.001 bits (541), Expect = 1.383e-67 Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTES 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL VTIA GGVLPNIQAVLLPKKTES Sbjct: 1 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTES 123
BLAST of histone h2a-like vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3) HSP 1 Score: 212.616 bits (540), Expect = 1.539e-67 Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGKG-GKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKT 120 MS RGKG GKA+ +KSRS+RAGLQFPVGR+HR LRKG+YA+RVGAGAPVYLAAV+EYLAAE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKKT Sbjct: 1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of histone h2a-like vs. nr
Match: gi|662208256|ref|XP_008477669.1| (PREDICTED: histone H2A-like [Diaphorina citri] >gi|662217518|ref|XP_008482742.1| PREDICTED: histone H2A-like [Diaphorina citri]) HSP 1 Score: 226.098 bits (575), Expect = 2.550e-70 Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGKAK SK+RSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1121115134|ref|XP_019547106.1| (PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115142|ref|XP_019547109.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115145|ref|XP_019547110.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1000212002|gb|KXJ81677.1| hypothetical protein RP20_CCG018287 [Aedes albopictus]) HSP 1 Score: 224.557 bits (571), Expect = 1.114e-69 Identity = 110/121 (90.91%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGKA+ +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKARVKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1173884044|gb|OQR68116.1| (histone H3-like [Tropilaelaps mercedesae] >gi|1173884315|gb|OQR68149.1| histone H3-like [Tropilaelaps mercedesae]) HSP 1 Score: 223.787 bits (569), Expect = 2.043e-69 Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK+K +K+RSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKSKTKAKTRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|755929542|ref|XP_011311067.1| (PREDICTED: histone H2A-like [Fopius arisanus] >gi|755930864|ref|XP_011313789.1| PREDICTED: histone H2A-like [Fopius arisanus]) HSP 1 Score: 223.787 bits (569), Expect = 2.430e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +K+RSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1048031409|ref|XP_017489640.1| (PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1048046021|ref|XP_017494516.1| PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1048057783|ref|XP_017462204.1| PREDICTED: histone H2A-like [Rhagoletis zephyria] >gi|1191617904|gb|OTF82047.1| histone H2A-like protein [Euroglyphus maynei]) HSP 1 Score: 223.402 bits (568), Expect = 2.455e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1105063696|emb|CRG62825.1| (histone H2A [Clunio marinus] >gi|1108464816|emb|CRL07053.1| CLUMA_CG019991, isoform A [Clunio marinus]) HSP 1 Score: 223.402 bits (568), Expect = 3.017e-69 Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLLRKG YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGDYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1191588083|gb|OTF76922.1| (hypothetical protein BLA29_012503 [Euroglyphus maynei]) HSP 1 Score: 223.402 bits (568), Expect = 3.184e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAV+EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKTKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus]) HSP 1 Score: 223.402 bits (568), Expect = 3.326e-69 Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|162319741|gb|ABX84387.1| (histone H2A, partial [Penaeus monodon]) HSP 1 Score: 223.016 bits (567), Expect = 3.745e-69 Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTE 121 MS RG GGK K SKSRSSRAGLQFPVGRIHRLLRKG+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE Sbjct: 1 MSGRGNGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
BLAST of histone h2a-like vs. nr
Match: gi|1067075681|ref|XP_018021394.1| (PREDICTED: histone H2A-like [Hyalella azteca]) HSP 1 Score: 223.402 bits (568), Expect = 3.850e-69 Identity = 107/134 (79.85%), Postives = 122/134 (91.04%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGSYAERVGAGAPVYLAAVMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKTESDRILKKIEMQTK 134 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLL+KG+YA+RVGAGAPVYLAAVMEYL+AE+LELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKTE+ + K++ Q++ Sbjct: 1 MSGRGKGGKTKSKAKSRSNRAGLQFPVGRIHRLLKKGNYADRVGAGAPVYLAAVMEYLSAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTETKSTVGKVKSQSQ 134 The following BLAST results are available for this feature:
BLAST of histone h2a-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 14
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BLAST of histone h2a-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone h2a-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold791_size96783:27129..34022+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold791_size96783-processed-gene-0.4 ID=snap_masked-scaffold791_size96783-processed-gene-0.4|Name=histone h2a-like|organism=Tigriopus kingsejongensis|type=gene|length=6894bp|location=Sequence derived from alignment at scaffold791_size96783:27129..34022+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h2a-like' has the following synonyms
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