h2a_astru ame: full, snap_masked-scaffold791_size96783-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000011020 (supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-1 gene:EMLSAG00000011020 transcript:EMLSAT00000011020 description:"snap_masked-LSalAtl2s741-processed-gene-2.19") HSP 1 Score: 79.7221 bits (195), Expect = 3.223e-21 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0 Query: 57 YLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 YL EVLEL GN KK I+ HLQLAIR D+EL KLL GVTIA G+L NIQAVLLPKK +K Sbjct: 19 YLTHEVLELPGNY----KKTHIIHCHLQLAIRRDKELKKLLAGVTIAHCGILHNIQAVLLPKKKTEK 81
BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000003961 (supercontig:LSalAtl2s:LSalAtl2s2120:1961:2668:-1 gene:EMLSAG00000003961 transcript:EMLSAT00000003961 description:"snap-LSalAtl2s2120-processed-gene-0.8") HSP 1 Score: 63.929 bits (154), Expect = 8.240e-15 Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 0 Query: 16 SRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLE 64 S SSR LQF IHRL+RK NY +R+G+GAPVY+ +L+EY+ AE+L+ Sbjct: 44 SCSSRTALQFLAVYIHRLVRKDNYIERLGSGAPVYIEALLEYIGAEILQ 92
BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000012218 (supercontig:LSalAtl2s:LSalAtl2s887:424407:426072:-1 gene:EMLSAG00000012218 transcript:EMLSAT00000012218 description:"snap-LSalAtl2s887-processed-gene-4.11") HSP 1 Score: 57.7658 bits (138), Expect = 1.000e-12 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0 Query: 35 RKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARI 78 RKGNYA+RVG+ A VYL ++ME +A E+LEL NAA DNKK I Sbjct: 16 RKGNYAERVGSDALVYLVAVMECIAPELLELTSNAARDNKKICI 59
BLAST of h2a_astru ame: full vs. L. salmonis genes
Match: EMLSAG00000000432 (supercontig:LSalAtl2s:LSalAtl2s1068:354081:357686:1 gene:EMLSAG00000000432 transcript:EMLSAT00000000432 description:"snap_masked-LSalAtl2s1068-processed-gene-3.12") HSP 1 Score: 49.6766 bits (117), Expect = 1.436e-9 Identity = 28/57 (49.12%), Postives = 33/57 (57.89%), Query Frame = 0 Query: 20 RAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKA 76 RAGLQFPV RIHRLLRKGNY ++ M+YL A+V+ N NKK Sbjct: 24 RAGLQFPVRRIHRLLRKGNY------------SATMKYLTAQVMYCCRN----NKKT 64
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A) HSP 1 Score: 212.231 bits (539), Expect = 1.661e-71 Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGKGGKA+ +KSRSSRAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLA++MEYLAAE+LELAGNAA DNKK RI PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+AK Sbjct: 1 MSGRGKGGKARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAK 122
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|59799575|sp|P69141.2|H2A_STRPU (RecName: Full=Histone H2A, embryonic >gi|59799589|sp|P69142.2|H2AE_PSAMI RecName: Full=Histone H2A, embryonic) HSP 1 Score: 207.223 bits (526), Expect = 2.030e-69 Identity = 99/122 (81.15%), Postives = 112/122 (91.80%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGK GKA+ +K+RSSRAGLQFPVGR+HR LRKGNYAKRVG GAPVY+A+++EYL AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+AK Sbjct: 1 MSGRGKSGKARTKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122005|sp|P13630.2|H2A_PARLI (RecName: Full=Histone H2A) HSP 1 Score: 206.068 bits (523), Expect = 4.188e-69 Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGK GKA+ +KSRSSRAGLQFPVGR+HR LRKGNYAKRVG GAPVY+A+++EYL AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K Sbjct: 1 MSGRGKSGKARTKAKSRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGK 122
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|462233|sp|P35061.2|H2A_ACRFO (RecName: Full=Histone H2A) HSP 1 Score: 206.068 bits (523), Expect = 5.817e-69 Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124 MS RGKG SKSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVY+A+++EYL+AE+LELAGNAA DNKK+RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK+ Sbjct: 1 MSGRGKGKAQGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKKQ 124
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3) HSP 1 Score: 206.068 bits (523), Expect = 5.879e-69 Identity = 101/123 (82.11%), Postives = 114/123 (92.68%), Query Frame = 0 Query: 1 MSARGKG-GKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGKG GKA+ +KSRS+RAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLA+++EYLAAE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK++K Sbjct: 1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN (RecName: Full=Histone H2A type 1-A; AltName: Full=Histone H2A/r) HSP 1 Score: 204.912 bits (520), Expect = 1.720e-68 Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120 MS RGK GGKA+ SKSRSSRAGLQFPVGRIHRLLRKGNYA+R+GAGAPVYLA+++EYL AE+LELAGNA+ DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ Sbjct: 1 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|122004|sp|P02264.2|H2A_ONCMY (RecName: Full=Histone H2A) HSP 1 Score: 204.142 bits (518), Expect = 3.834e-68 Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGK GGKA+ +K+RSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEK 123
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|121993|sp|P27661.2|H2AX_MOUSE (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X) HSP 1 Score: 203.756 bits (517), Expect = 8.503e-68 Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSA 121 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKG+YA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKS+ Sbjct: 1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSS 122
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN (RecName: Full=Histone H2A type 2-B) HSP 1 Score: 202.986 bits (515), Expect = 1.028e-67 Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVYLA+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of h2a_astru ame: full vs. SwissProt
Match: gi|81872175|sp|Q64522.3|H2A2B_MOUSE (RecName: Full=Histone H2A type 2-B; AltName: Full=H2a-613A) HSP 1 Score: 202.216 bits (513), Expect = 1.859e-67 Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MSARGK-GGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKS 120 MS RGK GGKA+ +KSRSSRAGLQFPVGR+HRLLRKGNYA+RVGAGAPVY+A+++EYL AE+LELAGNAA DNKK RI+PRHLQLA+RNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of h2a_astru ame: full vs. nr
Match: gi|662208256|ref|XP_008477669.1| (PREDICTED: histone H2A-like [Diaphorina citri] >gi|662217518|ref|XP_008482742.1| PREDICTED: histone H2A-like [Diaphorina citri]) HSP 1 Score: 218.394 bits (555), Expect = 1.772e-71 Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS RGKGGKAK SK+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK Sbjct: 1 MSGRGKGGKAKTKSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121115134|ref|XP_019547106.1| (PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115142|ref|XP_019547109.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1121115145|ref|XP_019547110.1| PREDICTED: histone H2A-like [Aedes albopictus] >gi|1000212002|gb|KXJ81677.1| hypothetical protein RP20_CCG018287 [Aedes albopictus]) HSP 1 Score: 216.468 bits (550), Expect = 1.071e-70 Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS RGKGGKA+ +KSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK Sbjct: 1 MSGRGKGGKARVKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
BLAST of h2a_astru ame: full vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus]) HSP 1 Score: 214.927 bits (546), Expect = 4.559e-70 Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS RGKGGK K +KSRS+RAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
BLAST of h2a_astru ame: full vs. nr
Match: gi|1005948275|ref|XP_015782447.1| (PREDICTED: histone H2A [Tetranychus urticae] >gi|1005948277|ref|XP_015782448.1| PREDICTED: histone H2A [Tetranychus urticae] >gi|1005958727|ref|XP_015787747.1| PREDICTED: histone H2A [Tetranychus urticae]) HSP 1 Score: 214.927 bits (546), Expect = 4.609e-70 Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS RGKGGK K +KSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA+++EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKS KK Sbjct: 1 MSGRGKGGKVKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSDKK 123
BLAST of h2a_astru ame: full vs. nr
Match: gi|162319741|gb|ABX84387.1| (histone H2A, partial [Penaeus monodon]) HSP 1 Score: 214.542 bits (545), Expect = 5.679e-70 Identity = 108/123 (87.80%), Postives = 113/123 (91.87%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS RG GGK K SKSRSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK Sbjct: 1 MSGRGNGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
BLAST of h2a_astru ame: full vs. nr
Match: gi|755929542|ref|XP_011311067.1| (PREDICTED: histone H2A-like [Fopius arisanus] >gi|755930864|ref|XP_011313789.1| PREDICTED: histone H2A-like [Fopius arisanus]) HSP 1 Score: 214.542 bits (545), Expect = 6.766e-70 Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAK 122 MS RGKGGK K +K+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K Sbjct: 1 MSGRGKGGKVKSKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121089775|ref|XP_019533532.1| (PREDICTED: histone H2A [Aedes albopictus] >gi|1121161941|ref|XP_019526538.1| PREDICTED: histone H2A [Aedes albopictus]) HSP 1 Score: 214.542 bits (545), Expect = 7.805e-70 Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124 MS+RGKGG AK KSRSSRAGLQFPVGR HRLLRKGNYA+RVGAGAPVYLA++MEYL+AEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKL+ GVTIA GGVLPNIQAVLLPKK+ KKE Sbjct: 1 MSSRGKGGNAKAKPKSRSSRAGLQFPVGRTHRLLRKGNYAERVGAGAPVYLAAVMEYLSAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLMSGVTIAQGGVLPNIQAVLLPKKTEKKE 124
BLAST of h2a_astru ame: full vs. nr
Match: gi|961096484|ref|XP_014773904.1| (PREDICTED: histone H2A-like [Octopus bimaculoides] >gi|918317225|gb|KOF86382.1| hypothetical protein OCBIM_22018720mg [Octopus bimaculoides]) HSP 1 Score: 214.927 bits (546), Expect = 7.966e-70 Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSA 121 MS RGKGGK K KSRSS+AGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKKSA Sbjct: 1 MSGRGKGGKVKAKPKSRSSKAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKSA 121
BLAST of h2a_astru ame: full vs. nr
Match: gi|1268080066|ref|XP_022710768.1| (histone H2A-like [Varroa jacobsoni]) HSP 1 Score: 213.772 bits (543), Expect = 1.336e-69 Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKKE 124 MS RGKGGK+K +K+RSSRAGLQFPVGRIHRLLRKGNYA+RVGAGAPVYLA+++EYLAAEVLELAGNAA DNKK RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ K + Sbjct: 1 MSGRGKGGKSKTKAKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKTQ 124
BLAST of h2a_astru ame: full vs. nr
Match: gi|1121089661|ref|XP_019532945.1| (PREDICTED: histone H2A [Aedes albopictus] >gi|1121162063|ref|XP_019526590.1| PREDICTED: histone H2A [Aedes albopictus]) HSP 1 Score: 213.772 bits (543), Expect = 1.558e-69 Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 0 Query: 1 MSARGKGGKAKEPSKSRSSRAGLQFPVGRIHRLLRKGNYAKRVGAGAPVYLASLMEYLAAEVLELAGNAATDNKKARIVPRHLQLAIRNDEELNKLLQGVTIAGGGVLPNIQAVLLPKKSAKK 123 MS+RGKGG AK KSRSSRAGLQFPVGR HRLLRKGNYA+RVGAGAPVYLA++MEYLAAEVLELAGNAA DNKK+RI+PRHLQLAIRNDEELNKLL GVTIA GGVLPNIQAVLLPKK+ KK Sbjct: 1 MSSRGKGGNAKAKPKSRSSRAGLQFPVGRTHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLTGVTIAQGGVLPNIQAVLLPKKTEKK 123 The following BLAST results are available for this feature:
BLAST of h2a_astru ame: full vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 14
Pagesback to top
BLAST of h2a_astru ame: full vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of h2a_astru ame: full vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold791_size96783:75107..75481+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold791_size96783-processed-gene-0.7 ID=snap_masked-scaffold791_size96783-processed-gene-0.7|Name=h2a_astru ame: full|organism=Tigriopus kingsejongensis|type=gene|length=375bp|location=Sequence derived from alignment at scaffold791_size96783:75107..75481+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'h2a_astru ame: full' has the following synonyms
Add to Basket
|