probable 39s ribosomal protein mitochondrial precursor, snap_masked-scaffold795_size96016-processed-gene-0.16 (gene) Tigriopus kingsejongensis

Overview
Nameprobable 39s ribosomal protein mitochondrial precursor
Unique Namesnap_masked-scaffold795_size96016-processed-gene-0.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000000463 (supercontig:LSalAtl2s:LSalAtl2s106:688697:689553:-1 gene:EMLSAG00000000463 transcript:EMLSAT00000000463 description:"maker-LSalAtl2s106-augustus-gene-6.6")

HSP 1 Score: 283.108 bits (723), Expect = 1.586e-96
Identity = 139/267 (52.06%), Postives = 191/267 (71.54%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDGLDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIM-HGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDE-AATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+    AVRR     ++S +  +TKAYANLPER+++R++ +L     + D      ++T+ +    ++RPWSD YW +  P +     +VEPI +EDW+WF+GDRVEI+  G D GKQG+INYV+Q++NWVCVEG+N +H+I  R+R FPG++   EKPLLVT DI+LVDP+ E AA  VEWR++EEGERVR +I +   +P+PS A ET+DYKTP GY EN   DTPA+  EEI+F+P+L TF+MDIM + GIKE RIP +TY+Y
Sbjct:    1 MRLTTPWAVRRYWK--VNSQIGKYTKAYANLPERFLVRRSTRLGDISDLNDETQMPYIKTAXVKVHTMDRPWSDTYWMKHKPFEKTRDIFVEPILEEDWMWFRGDRVEIVKEGADFGKQGYINYVIQERNWVCVEGMNLKHQIVARTRDFPGILISTEKPLLVTEDIKLVDPTTEKAANTVEWRYTEEGERVRVAIDSDSEIPIPSAASETIDYKTPSGYAENEAKDTPAKFAEEISFEPKLATFDMDIMESMGIKEERIPKRTYWY 265          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|122069640|sp|Q29MA5.1|RM24_DROPS (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 218.779 bits (556), Expect = 4.804e-70
Identity = 112/240 (46.67%), Postives = 152/240 (63.33%), Query Frame = 0
Query:   26 KAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            K ++NLP+ YI R   ++ ++ P       + VE     +    RPW+  +  Q +P        +EP+  EDW +F+GDR+E++ G D+GKQG +  V+ ++NWV VEGLN  +   G  ++FPG++   E PL V  DIRLVDPSD   TE EWRF+EEGE+VR S+R+G I+P+P    +T DYKTP  YIE  + DTPA VV EI FQP+L TFEMDIM   GIKE R P K+Y+Y
Sbjct:   12 KNFSNLPKEYIERSKKQVYWQTPREKNYLPRTVERKRF-RYTTNRPWTGQFRQQNMPATMRRKVLIEPV--EDWSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRRVGAEKEFPGIIIKSEAPLHVLNDIRLVDPSDLLGTEFEWRFTEEGEKVRVSMRSGRIIPIPETNNQTHDYKTPNAYIER-EKDTPAAVVGEITFQPKLSTFEMDIMEEMGIKEERTPAKSYWY 247          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74948247|sp|Q9VMY1.1|RM24_DROME (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 216.083 bits (549), Expect = 5.030e-69
Identity = 112/240 (46.67%), Postives = 152/240 (63.33%), Query Frame = 0
Query:   26 KAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            K ++NLP+ YI R   ++ ++ P       + VE     +    R W+  +  Q +P        VEPI  EDW +F+GDR+E++ G D+GKQG +  V+ ++NWV VEGLN  +   G  ++FPG++   E PL VT+DIRLVDPSD   T+ EWRF+EEGE+VR S+R+G I+P+P    +T DYKTP  YIE  + DTP  VV EI FQP+L TFEMDIM   GIKE R P K+Y+Y
Sbjct:   12 KNFSNLPKEYIERSKKQVYWQTPKEINYLPRTVERKRF-RYTTNRSWTGQFRQQNMPGTVRRKVLVEPI--EDWSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAYIER-EKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81880358|sp|Q9CQ06.1|RM24_MOUSE (RecName: Full=39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 147.902 bits (372), Expect = 1.169e-42
Identity = 89/217 (41.01%), Postives = 116/217 (53.46%), Query Frame = 0
Query:   53 AFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQ----PRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            A      +SP  +  + RP S A   +  P     P  VEPI  EDW  F GD VEI+ G D GKQG +  VV+ +NWV +EGLN  +   GR++   G +   E PLL    ++LVDP D   TE++WRF+E GERVR S R+G I+P P       ++    G +  T TD P     E A +    PRL T E D+M A GI+ETR   K Y+Y
Sbjct:    8 ALASKATSSPFYRYGMSRPGSIADKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIASEAPLL-HHQVKLVDPVDRKPTEIQWRFTEAGERVRVSTRSGRIIPKP-------EFPRADGIVPETWTDGPKDTSVEDALERTYVPRLKTLEEDVMEAMGIQETRRFKKVYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82184451|sp|Q6GPM4.1|RM24_XENLA (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 146.747 bits (369), Expect = 3.179e-42
Identity = 79/198 (39.90%), Postives = 117/198 (59.09%), Query Frame = 0
Query:   68 LERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            + RP + A   +  P    +  +VEP+ KE+W +F+GD VE++HG D GKQG +  VV+ +NWV V+GLN      GR+ ++ G     E PLL+ + + L+DP+D   TE+EWR++EEGERVR S R+G I+P P   L+  D   P+ + ++   DT      E  + P L TF+ +IM   GI E R   K+Y+Y
Sbjct:   23 MSRPSTLAAKRRNPPGKRRSKVFVEPVSKEEWQYFRGDTVEVLHGKDAGKQGKVTQVVRARNWVVVDGLNTHFRYVGRTDEYRGTYVASEGPLLLNQ-VSLIDPTDRKPTEIEWRYTEEGERVRVSARSGRIIPKP--VLQRRDGIIPEQW-KDGPKDTSVEDALERTYVPSLKTFQEEIMEKTGIAENRRHRKSYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|82183160|sp|Q6DH02.1|RM24_DANRE (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 145.591 bits (366), Expect = 8.928e-42
Identity = 77/196 (39.29%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   70 RPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            RPW+ A      P       +VEPI  EDW   +GD VE++ G ++GKQG +  V++ +NWV +EGLN  +   GRS  + G     E PLL+ +DI L+DP+D   TE++WR++EEGERVR S+RTG I+P P    +  D   PQ + +     +P   +++  + P L T E ++M    I+E R P K+Y+Y
Sbjct:   25 RPWTIAARRLNPPGKRRRKVFVEPIANEDWPVVRGDTVEVLSGKEKGKQGKVAQVIRARNWVILEGLNTHYRYVGRSGDYRGTYLASEAPLLL-KDIALIDPTDRKPTEIQWRYTEEGERVRVSVRTGRIIPKP--VFQRKDGIVPQQWKDGPKDTSPEDTLQK-TYTPSLKTLEEEVMEKMNIQENRRPRKSYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|122069630|sp|Q3SYS0.1|RM24_BOVIN (RecName: Full=39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 145.206 bits (365), Expect = 1.219e-41
Identity = 81/175 (46.29%), Postives = 106/175 (60.57%), Query Frame = 0
Query:   91 VEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            VEPI +EDW  F GDRVEI+ G D GKQG +  V++ +NWV VEGLN  +   G++  F G +   E PLL  + ++LVDP D   TEVEWRF+E GERVR S R+G I+P P   +   D   P+ +I+    DT      E  + PRL T E ++M A GI+ETR   K Y+Y
Sbjct:   46 VEPIPEEDWHLFCGDRVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDFRGTMVPSEAPLLHNQ-VKLVDPMDRKPTEVEWRFTEAGERVRVSTRSGRIIPKPD--VPRADGIVPETWIDGPK-DTSVEDALEKTYVPRLKTLEEEVMEAMGIQETRRHKKVYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81884155|sp|Q66H47.1|RM24_RAT (RecName: Full=39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 144.436 bits (363), Expect = 2.401e-41
Identity = 89/217 (41.01%), Postives = 115/217 (53.00%), Query Frame = 0
Query:   53 AFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQ----PRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            A       SP  +  + RP S A   +  P     P  VEPI  EDW  F GD VEI+ G D GKQG +  VV+ +NWV +EGLN  +   GR++   G +   E PLL    ++LVDP D   TE++WRF+E GERVR S R+G I+P P       ++    G +  T TD P     E A +    PRL T E D+M A GI+ETR   K Y+Y
Sbjct:    8 ALASKATLSPHYRYGMSRPGSIADKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIPSEAPLL-HHQVKLVDPVDRKPTEIQWRFTEAGERVRVSTRSGRIIPKP-------EFPRADGIVPETWTDGPKDTSVEDALERTYVPRLKTLEEDVMEAMGIQETRRFKKIYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74751733|sp|Q96A35.1|RM24_HUMAN (RecName: Full=39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; AltName: Full=Mitochondrial large ribosomal subunit protein uL24m; Flags: Precursor)

HSP 1 Score: 138.272 bits (347), Expect = 5.154e-39
Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = 0
Query:   88 PNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            P  VEPI  EDW  F GD VEI+ G D GKQG +  V++ +NWV V GLN  +   G++  + G +   E PLL  R ++LVDP D   TE+EWRF+E GERVR S R+G I+P P       D   P+ +I+    DT      E  + P L T + ++M A GIKETR   K Y+Y
Sbjct:   43 PVVVEPISDEDWYLFCGDTVEILEGKDAGKQGKVVQVIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEAPLL-HRQVKLVDPMDRKPTEIEWRFTEAGERVRVSTRSGRIIPKPE--FPRADGIVPETWIDGPK-DTSVEDALERTYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74790650|sp|Q61DH4.1|RM24_CAEBR (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 4.433e-31
Identity = 82/257 (31.91%), Postives = 129/257 (50.19%), Query Frame = 0
Query:   27 AYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDD------VTPNYVE-------PIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCE--HEITGRSR-KFPGVVNLKEKPLLVTR-DIRLVDPSDEAATEVEWRFSEEG-ERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            AY    +R + RK    R+  P  D     V     +P  R  RPW D   +  L   D      ++  Y E        +   +W +F GD V++M G D+G+QG +  + +D + V V+GL+     ++ G  +      +  +E+PL V++  + LVDP+DE   E  W+ +    E +R S R+G+ +P+PS+A  T +Y  P+ YIE    DTP+  V E  + PR+ +FE +IM   GIKE R P  T++Y
Sbjct:   26 AYVERTKRTVPRKVFGDRFGAP--DIKMYYVHPDDYLPSHR--RPWEDKQLSSHLQRSDKYFSAQLSNKYFELRRPKSERMPDTEWTFFPGDLVQVMVGKDKGRQGLVLTISRDSSEVVVDGLHTRLGEDMEGSEKLGVDKTLRWQEQPLSVSKKQVMLVDPNDENPCEARWQLNASADEYIRVSTRSGYEIPIPSQAKVTYEYLQPENYIEVEGKDTPSDAVLERTYMPRVASFEQEIMEEMGIKEDRTPKPTFWY 278          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74961594|sp|P91353.1|RM24_CAEEL (RecName: Full=Probable 39S ribosomal protein L24, mitochondrial; Short=L24mt; Short=MRP-L24; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 4.925e-31
Identity = 83/257 (32.30%), Postives = 130/257 (50.58%), Query Frame = 0
Query:   27 AYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDD------VTPNYV-------EPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCE--HEITGRSR-KFPGVVNLKEKPLLVTR-DIRLVDPSDEAATEVEWRFSEEG-ERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            AY    +R + RK    R+  P  D     V     +P  R  RPW D   +  L   D      ++  Y        E +   +W +F GD V++M G D+G+QG +    +D + V V+GL+ +   ++ G  +      +  +E+PL V++  + LVDP+DE   E  W+ +  G E +R S R+G+ +P+PS+A  T +Y  P+ YIE    DTPA  V E  + P++ +FE +IM   GIKE R P  T++Y
Sbjct:   26 AYVERTKRTVPRKVFGDRFGAP--DIKMYYVHPDDYVPSHR--RPWEDKQISSHLHRSDKYFSAQLSNQYFNLRRPKSERMADTEWTFFPGDLVQVMVGKDKGRQGLVLTTSRDSSDVIVDGLHTKLGEDMEGSEKLGVDKTLRWQEQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEYLQPENYIEVEGKDTPADAVLERTYMPKVASFEQEIMEEMGIKEERTPKPTFWY 278          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225717682|gb|ACO14687.1| (Probable 39S ribosomal protein L24, mitochondrial precursor [Caligus clemensi])

HSP 1 Score: 283.878 bits (725), Expect = 8.800e-93
Identity = 143/268 (53.36%), Postives = 191/268 (71.27%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDGLDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPN-YVEPIKKEDWLWFKGDRVEIM-HGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDE-AATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+   L+VRR     + S L  +TK Y+NLPERY+ R +  L     + D A +  ++TS +     +RPWS+AYW +  P D    + YVEPI + DW+WF+GDRVE++  GPD GKQG+INY+VQ++NWVCVEGLN  H+I G ++ +PG++   EKPLLVT  I+LVDP+ E AA +VEWRF+EEGERVR +I T   +P+PS A ET+DYKTP GY EN   DTPA++VEEI F+P+L TF+MD+M A GIKE+RIP +TY+Y
Sbjct:    1 MRLTVPLSVRRSWK--VKSELGKYTKGYSNLPERYLARASTYLGDISDLDDEAQRPYIKTSKVKVHTTDRPWSEAYWRKHQPFDKNEEDIYVEPILERDWMWFRGDRVEVVKEGPDFGKQGYINYIVQERNWVCVEGLNLHHQIMGSTQDYPGILLSTEKPLLVTEHIKLVDPTTEKAAHQVEWRFTEEGERVRVAIDTDSEIPIPSAAYETIDYKTPSGYGENKTKDTPAKLVEEITFEPKLATFDMDVMEAMGIKESRIPKRTYWY 266          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225713810|gb|ACO12751.1| (Probable 39S ribosomal protein L24, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 283.108 bits (723), Expect = 1.453e-92
Identity = 139/267 (52.06%), Postives = 191/267 (71.54%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDGLDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIM-HGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDE-AATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+    AVRR     ++S +  +TKAYANLPER+++R++ +L     + D      ++T+ +    ++RPWSD YW +  P +     +VEPI +EDW+WF+GDRVEI+  G D GKQG+INYV+Q++NWVCVEG+N +H+I  R+R FPG++   EKPLLVT DI+LVDP+ E AA  VEWR++EEGERVR +I +   +P+PS A ET+DYKTP GY EN   DTPA+  EEI+F+P+L TF+MDIM + GIKE RIP +TY+Y
Sbjct:    1 MRLTTPWAVRRYWK--VNSQIGKYTKAYANLPERFLVRRSTRLGDISDLNDETQMPYIKTADVKVHTMDRPWSDTYWMKHKPFEKTRDIFVEPILEEDWMWFRGDRVEIVKEGADFGKQGYINYVIQERNWVCVEGMNLKHQIVARTRDFPGILISTEKPLLVTEDIKLVDPTTEKAANTVEWRYTEEGERVRVAIDSDSEIPIPSAASETIDYKTPSGYAENEAKDTPAKFAEEISFEPKLATFDMDIMESMGIKEERIPKRTYWY 265          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225714328|gb|ACO13010.1| (Probable 39S ribosomal protein L24, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 281.182 bits (718), Expect = 9.295e-92
Identity = 139/267 (52.06%), Postives = 190/267 (71.16%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDGLDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIM-HGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDE-AATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+    AVRR     ++S +  +TKAYANLPER++ R++ +L       D      ++T+ +    ++RPWSD YW +  P ++    +VEPI +EDW+WF+GDRVEI+  G D G+QG+INYV+Q++NWVCVEG+N +H+I  R+R FPG++   EKPLLVT DI+LVDP+ E AA  VEWR++EEGERVR +I +   +P+PS A ET+DYKTP GY EN   DTPA+  EEI+F+P+L TF+MDIM + GIKE RIP KTY+Y
Sbjct:    1 MRLTTPWAVRRYWK--VNSQIGKYTKAYANLPERFLARRSTRLGDISDPNDETQMPYIKTADVKVHTMDRPWSDTYWMKHKPFEETRDIFVEPILEEDWMWFRGDRVEIVKEGADFGEQGYINYVIQERNWVCVEGMNLKHQIVARTRDFPGILISTEKPLLVTEDIKLVDPTTEKAANTVEWRYTEEGERVRVAIDSDSEIPIPSAASETIDYKTPSGYAENEAKDTPAKFAEEISFEPKLATFDMDIMESMGIKEERIPKKTYWY 265          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1325278883|ref|XP_023324082.1| (probable 39S ribosomal protein L24, mitochondrial [Eurytemora affinis])

HSP 1 Score: 276.559 bits (706), Expect = 5.050e-90
Identity = 140/267 (52.43%), Postives = 181/267 (67.79%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDG--LDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+      RRG  D   + SGL  +T  Y+NLPERYI RK  K++YK P   P F   ++   I    LERPWS +YW +  P        VEPI + DW+WF+GDRVEI+ GPD+GKQG+IN VVQ++NWV VEGLN ++   G S+ FPG++  +EKPLLVTRDI+LVDP+DE   EVEW ++E  ERVR S R+G I+PMP +A ET+DYK+  GY+ N   DT    VEEI ++P+L TFEMDIM + GI+E RIP K+Y+Y
Sbjct:    1 MRLTCFNLARRGFRDPAVIHSGLGKYTTDYSNLPERYITRKITKIKYKAP-EGPEFIPKMKAWKIQHHGLERPWSSSYWAEHPPFQYKDTAIVEPILERDWMWFRGDRVEILTGPDKGKQGYINMVVQERNWVTVEGLNTKYVTMGESQDFPGMMIKQEKPLLVTRDIKLVDPTDEKPAEVEWMYTEASERVRVSARSGSIIPMPGKAEETIDYKSKSGYVLNKSKDTAPAAVEEITYEPKLGTFEMDIMESLGIQENRIPKKSYWY 266          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225711230|gb|ACO11461.1| (Probable 39S ribosomal protein L24, mitochondrial precursor [Caligus rogercresseyi])

HSP 1 Score: 270.781 bits (691), Expect = 8.898e-88
Identity = 137/267 (51.31%), Postives = 184/267 (68.91%), Query Frame = 0
Query:    1 MRIWPTLAVRRGLGDGLDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIM-HGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDE-AATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            MR+     VRR     + S L  +TKAYANLP+RY+ R + +L     + D   +  ++T+ I     +RPWS+++W +    ++    YVEPI + DW+WF+GDRVE+   GPD GKQG+INYVVQ++NWV VEG+N +H I G+++ FPG++   EKPLLVT +IRLVDP+ E AA EVEWRF+EEGERVR ++ T   +P+PS A ETVDYKTP GY EN   DTPA+  EEI F+PRL TF+MDIM +  I E R+P +TY+Y
Sbjct:    1 MRLTSPWCVRRSWK--IKSELGKYTKAYANLPDRYLFRASTRLGDISDLDDETQRPYIKTAKIRVHTTDRPWSNSFWMRNQAFEETRDIYVEPILEHDWMWFRGDRVEVTKEGPDFGKQGYINYVVQERNWVTVEGMNLKHSIVGQTKDFPGILISTEKPLLVTSEIRLVDPTTEKAAHEVEWRFTEEGERVRVAMDTEAEIPLPSAASETVDYKTPAGYSENELKDTPAKAAEEITFEPRLATFDMDIMQSMNITEERVPKRTYWY 265          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|755948074|ref|XP_011300664.1| (PREDICTED: probable 39S ribosomal protein L24, mitochondrial [Fopius arisanus])

HSP 1 Score: 239.58 bits (610), Expect = 1.353e-75
Identity = 120/242 (49.59%), Postives = 164/242 (67.77%), Query Frame = 0
Query:   24 WTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            W+K +ANLPER+I RK  ++ +K P  DP F   V      +   ERPW+  ++ +  P  +V+P  VEPIK  +W WF+GDRVEI+ G D+GKQG I  ++Q++NWV VEGLN +  I G+++ FPG+V L+E+PLLVT DI LVDP+D     +EWR++E+GE+VR S RTG I+P+P  + ET+DYK P  Y E    DT    +E+I F+P L TFEMDIM   GIKE R+P KT++Y
Sbjct:   14 WSKHFANLPERFIRRKMEQIYWKSPKGDPRFIPTVVQRERFRFGKERPWTREFYMENFPGKNVSPVLVEPIK--EWSWFRGDRVEILVGRDKGKQGLIQQIIQERNWVIVEGLNTKMRIMGKTKDFPGIVILEEQPLLVTTDIALVDPADLNTCTMEWRWTEDGEKVRVSTRTGRIIPIPMTSKETIDYKLPHLYKEQPK-DTTREAIEKITFKPELKTFEMDIMDKMGIKEDRVPQKTFWY 252          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1080033591|ref|XP_018562909.1| (probable 39S ribosomal protein L24, mitochondrial [Anoplophora glabripennis])

HSP 1 Score: 231.876 bits (590), Expect = 1.221e-72
Identity = 118/249 (47.39%), Postives = 158/249 (63.45%), Query Frame = 0
Query:   17 LDSGLMPWTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            L S +  W+K ++NLP+RYI R   ++ ++ P         V         + RPW+  +     P       +VEPI+  +W +F+GDRVEI+ G D+GKQG +  ++Q++NWV VEGLNCE +  G  ++F GV    EKPLLVT ++RLVDPSD   T +EWRF+E+G+RVR S RTG I+PMP+ A ET+DYKT   Y E    DT A  V EI F+PRLCTFEMDIM    IKE R+PPK+Y+Y
Sbjct:    7 LFSKVGKWSKQFSNLPDRYIERAMEQVYWRNPTGMQYKPNAVVKRKKFHFTMNRPWTAEFRQDNAPGKLSPKVFVEPIR--EWSFFRGDRVEILVGKDKGKQGIVKQIIQERNWVIVEGLNCELKQLGDDKEFSGVYVQSEKPLLVTNEVRLVDPSDLTGTSIEWRFTEDGQRVRVSTRTGRIIPMPASAEETIDYKTKATYKEQPK-DTTAAAVSEITFEPRLCTFEMDIMEKMNIKEDRVPPKSYWY 252          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|939660902|ref|XP_014278315.1| (PREDICTED: probable 39S ribosomal protein L24, mitochondrial [Halyomorpha halys])

HSP 1 Score: 231.876 bits (590), Expect = 1.315e-72
Identity = 113/241 (46.89%), Postives = 165/241 (68.46%), Query Frame = 0
Query:   25 TKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            TK YANLPE YI +   ++ +K P   P +    ++       + RPW+  +     P       ++EP +  DW +FKGDRVEI+ GPD+GKQG I+ V+Q++NWV VEGLNC+ ++ G+++KFPG+V  +E+PLLV R ++LVDP+D   TE+EWR++EEG++VR S+RTG I+P+P++A ET DYKT + Y E+   DT +  + E+ F PRL TFEM+IM + G+KE RIP +TY+Y
Sbjct:   18 TKKYANLPESYIKKCLEQVEWKTPRGLPQYLPRTKSWKKRYFNVHRPWTTGFQRDNTPGTYHRKVFLEPYR--DWSFFKGDRVEILSGPDKGKQGIISVVIQERNWVIVEGLNCKMKMVGKTKKFPGLVQQEEQPLLVHRQVKLVDPADLQNTEIEWRYTEEGDKVRVSLRTGRIIPIPTQAQETYDYKTKKTYKESAK-DTTSDALSEVTFSPRLETFEMNIMKSMGLKEERIPTQTYWY 255          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|665801931|ref|XP_008548999.1| (PREDICTED: probable 39S ribosomal protein L24, mitochondrial isoform X1 [Microplitis demolitor])

HSP 1 Score: 231.106 bits (588), Expect = 2.731e-72
Identity = 119/242 (49.17%), Postives = 163/242 (67.36%), Query Frame = 0
Query:   24 WTKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            W+K YANLP+RYI R   ++ YK P  DP +          Q    RPW+  ++    P   V  ++VEPIK  DW +F+GDRVE++ G D+GKQG +  ++Q++NW+ VEGLN +    G+++KFPG+  L+E+PLLVT D+ LVDPSD  +T+++WR++EEGE+VR SIRTG I+P+P   LET+DYK P  Y E     T A  VE+I F+P L TFEMDIM + GIKE RIP KT++Y
Sbjct:   16 WSKKYANLPDRYIKRAMEQVYYKTP-NDPRYLPRTVQRTQWQFTTHRPWTREFYFDNYPGKKVPWHHVEPIK--DWSFFRGDRVEVLVGRDKGKQGIVQQIIQERNWIIVEGLNTKLVSMGKTKKFPGIFILEEQPLLVTTDVALVDPSDLQSTKIDWRYTEEGEKVRVSIRTGRIIPIPLSNLETIDYKHPNLYREQAKDTTKAN-VEKITFKPVLKTFEMDIMDSIGIKEDRIPKKTFWY 253          
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1108480404|emb|CRK92000.1| (CLUMA_CG005580, isoform A [Clunio marinus])

HSP 1 Score: 227.639 bits (579), Expect = 8.383e-71
Identity = 113/241 (46.89%), Postives = 155/241 (64.32%), Query Frame = 0
Query:   25 TKAYANLPERYIMRKALKLRYKPPVRDPAFKQVVETSPIPQVRLERPWSDAYWNQVLPHDDVTPNYVEPIKKEDWLWFKGDRVEIMHGPDQGKQGFINYVVQDKNWVCVEGLNCEHEITGRSRKFPGVVNLKEKPLLVTRDIRLVDPSDEAATEVEWRFSEEGERVRCSIRTGHILPMPSEALETVDYKTPQGYIENTDTDTPARVVEEIAFQPRLCTFEMDIMAAQGIKETRIPPKTYFY 265
            +K +AN P+ YI R   +L ++ P R P +          +    RPW+  ++ Q +P       +VEPI  E W++F+GDRVE++ G D+GKQG +N V+Q++NWV VEGLN      G  + FPG++   E PLLVT  ++L+DP D  +TEVEWRF+EEGERVR S RTG I+P+PS   ET DYK+   Y+   + DT A VV EI F+P+L TFEM+IM + GI+E RIP KTY+Y
Sbjct:   19 SKKFANFPDEYIARSMEQLHWRTP-RAPQYSDKTIERKKFRFTTNRPWTAQFYQQNMPGTIRKKVFVEPIPPEQWMYFRGDRVEVLVGKDKGKQGIVNQVIQERNWVIVEGLNTHLRAVGADKTFPGILIQSEAPLLVTNQVKLIDPVDLLSTEVEWRFTEEGERVRVSKRTGRIIPIPSLHEETKDYKSKSLYVVR-EKDTEAAVVSEITFKPKLATFEMEIMESMGIEEDRIPKKTYWY 257          
The following BLAST results are available for this feature:
BLAST of probable 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000004631.586e-9652.06supercontig:LSalAtl2s:LSalAtl2s106:688697:689553:-... [more]
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BLAST of probable 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|122069640|sp|Q29MA5.1|RM24_DROPS4.804e-7046.67RecName: Full=Probable 39S ribosomal protein L24, ... [more]
gi|74948247|sp|Q9VMY1.1|RM24_DROME5.030e-6946.67RecName: Full=Probable 39S ribosomal protein L24, ... [more]
gi|81880358|sp|Q9CQ06.1|RM24_MOUSE1.169e-4241.01RecName: Full=39S ribosomal protein L24, mitochond... [more]
gi|82184451|sp|Q6GPM4.1|RM24_XENLA3.179e-4239.90RecName: Full=Probable 39S ribosomal protein L24, ... [more]
gi|82183160|sp|Q6DH02.1|RM24_DANRE8.928e-4239.29RecName: Full=Probable 39S ribosomal protein L24, ... [more]
gi|122069630|sp|Q3SYS0.1|RM24_BOVIN1.219e-4146.29RecName: Full=39S ribosomal protein L24, mitochond... [more]
gi|81884155|sp|Q66H47.1|RM24_RAT2.401e-4141.01RecName: Full=39S ribosomal protein L24, mitochond... [more]
gi|74751733|sp|Q96A35.1|RM24_HUMAN5.154e-3943.82RecName: Full=39S ribosomal protein L24, mitochond... [more]
gi|74790650|sp|Q61DH4.1|RM24_CAEBR4.433e-3131.91RecName: Full=Probable 39S ribosomal protein L24, ... [more]
gi|74961594|sp|P91353.1|RM24_CAEEL4.925e-3132.30RecName: Full=Probable 39S ribosomal protein L24, ... [more]

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BLAST of probable 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225717682|gb|ACO14687.1|8.800e-9353.36Probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|225713810|gb|ACO12751.1|1.453e-9252.06Probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|225714328|gb|ACO13010.1|9.295e-9252.06Probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|1325278883|ref|XP_023324082.1|5.050e-9052.43probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|225711230|gb|ACO11461.1|8.898e-8851.31Probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|755948074|ref|XP_011300664.1|1.353e-7549.59PREDICTED: probable 39S ribosomal protein L24, mit... [more]
gi|1080033591|ref|XP_018562909.1|1.221e-7247.39probable 39S ribosomal protein L24, mitochondrial ... [more]
gi|939660902|ref|XP_014278315.1|1.315e-7246.89PREDICTED: probable 39S ribosomal protein L24, mit... [more]
gi|665801931|ref|XP_008548999.1|2.731e-7249.17PREDICTED: probable 39S ribosomal protein L24, mit... [more]
gi|1108480404|emb|CRK92000.1|8.383e-7146.89CLUMA_CG005580, isoform A [Clunio marinus][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold795_size96016supercontigscaffold795_size96016:90756..91553 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold795_size96016-processed-gene-0.16-mRNA-1snap_masked-scaffold795_size96016-processed-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold795_size96016:90756..91553-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold795_size96016-processed-gene-0.16 ID=snap_masked-scaffold795_size96016-processed-gene-0.16|Name=probable 39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=798bp|location=Sequence derived from alignment at scaffold795_size96016:90756..91553- (Tigriopus kingsejongensis)
ATGCGTATCTGGCCCACTTTGGCGGTGAGGCGAGGCCTCGGCGATGGTCT GGACTCGGGCTTGATGCCCTGGACCAAGGCCTATGCCAACTTGCCGGAGC GCTACATTATGCGCAAGGCCTTAAAACTTAGGTACAAGCCGCCTGTTCGA GATCCGGCCTTCAAGCAGGTGGTGGAGACCTCGCCCATACCACAGGTCCG ATTGGAGCGGCCCTGGAGTGACGCCTACTGGAACCAGGTGTTGCCCCACG ATGACGTCACACCCAACTACGTGGAGCCCATTAAGAAGGAGGACTGGCTA TGGTTCAAAGGCGATCGCGTGGAAATCATGCATGGTCCGGACCAGGGCAA GCAGGGGTTCATCAACTACGTGGTCCAGGACAAAAATTGGGTTTGCGTGG AGGGCCTCAATTGCGAGCACGAGATCACGGGTCGGAGTCGGAAGTTTCCG GGCGTGGTTAACCTTAAGGAGAAGCCGCTCTTGGTCACCCGTGACATCCG GCTGGTGGATCCCTCGGACGAAGCGGCCACTGAGGTCGAGTGGCGCTTCA GCGAGGAGGGCGAGCGGGTGCGTTGCTCAATCCGGACGGGCCACATTCTG CCCATGCCTTCTGAGGCCCTCGAGACGGTCGACTACAAGACCCCACAGGG CTACATAGAAAACACCGACACGGACACGCCTGCCAGAGTCGTGGAAGAGA TCGCTTTCCAACCCCGCCTCTGCACCTTTGAGATGGACATCATGGCAGCT CAGGGCATCAAGGAGACACGCATCCCGCCTAAGACTTATTTCTATTAG
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Synonyms
The feature 'probable 39s ribosomal protein mitochondrial precursor' has the following synonyms
Synonym
Tk10614
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