nadh-quinone oxidoreductase chain 5, snap_masked-scaffold8388_size2752-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview
Namenadh-quinone oxidoreductase chain 5
Unique Namesnap_masked-scaffold8388_size2752-processed-gene-0.0
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. L. salmonis genes
Match: EMLSAG00000001894 (supercontig:LSalAtl2s:LSalAtl2s1325:62473:63177:-1 gene:EMLSAG00000001894 transcript:EMLSAT00000001894 description:"maker-LSalAtl2s1325-augustus-gene-0.32")

HSP 1 Score: 202.216 bits (513), Expect = 7.205e-65
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0 
Query:    1 MDRDVATQQLNANLADKG---FLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            M++D++ Q     +  K    +++   +DLINW R  SL  +TFGLACCAVEMMH + PRYD++R+G   RASPRQ+D+++VAGTLTNKMAPA RKVYDQM EPR+VISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   39 MEKDISGQYSPFRVDKKNKAEYVVARLDDLINWGRKTSLWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVILVAGTLTNKMAPAFRKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 180
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. L. salmonis genes
Match: EMLSAG00000010225 (supercontig:LSalAtl2s:LSalAtl2s679:28674:29603:-1 gene:EMLSAG00000010225 transcript:EMLSAT00000010225 description:"maker-LSalAtl2s679-augustus-gene-0.32")

HSP 1 Score: 155.606 bits (392), Expect = 5.130e-46
Identity = 75/168 (44.64%), Postives = 105/168 (62.50%), Query Frame = 0 
Query:  147 DCTMSDALTELGGYIEAKRPDCVLAWDIAHG-ELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            D  M   L + G Y+    P  V    +  G EL V +    +  ++ FLK     +F++LVD+  +D   R  RF+++Y+ LS+  N RIR++    E   + S+V+IH +ANW+EREV+DMFG+ FS HPDLRR+LTDYGF GHPLRKDFP TG+ E+RYD   +R
Sbjct:   54 DPVMRQNLQDFGQYVAECMPKYVQKIQLTAGDELEVLIHPDGVVPVMSFLKDHHNAQFTNLVDLCGMDVPTRKYRFEIIYNLLSLRYNSRIRVKTYTDELTPIDSIVEIHKAANWYEREVWDMFGVYFSNHPDLRRILTDYGFEGHPLRKDFPLTGFYELRYDMEHQR 221
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|122398270|sp|Q1GIP0.1|NUOC_RUEST (RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C)

HSP 1 Score: 298.901 bits (764), Expect = 1.686e-101
Identity = 139/164 (84.76%), Postives = 151/164 (92.07%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            M +AL +LG  IEAKRP+CVL+WDIAHGELN+DV  ANIAGLVEFL+ D+ CRFS+LVDITAVDY  R KRFDVVYH LSMYQNQRIRLR AVREEDMVPS+VD+HPSANWFEREVFDMFGILF+GHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MIEALQDLGHQIEAKRPECVLSWDIAHGELNIDVKPANIAGLVEFLRVDSACRFSTLVDITAVDYPERTKRFDVVYHLLSMYQNQRIRLRAAVREEDMVPSIVDVHPSANWFEREVFDMFGILFTGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|122972618|sp|Q163Q2.1|NUOC_ROSDO (RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C)

HSP 1 Score: 291.582 bits (745), Expect = 1.468e-98
Identity = 131/164 (79.88%), Postives = 150/164 (91.46%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MS+ L ELG YI  KR DCVLAWD+ + ELN+DVT +NI GLVEFLK+DATCRFS+L+DITAVDYTGRAKR+DVVYH LSMYQN R+RLRV++RE+ M+PS++ +HPSANWFEREVFDMFGILFSGHPDLRR+LTDYGFRGHPLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MSEPLQELGNYIATKRADCVLAWDVTNKELNLDVTPSNIVGLVEFLKTDATCRFSTLIDITAVDYTGRAKRYDVVYHLLSMYQNHRVRLRVSIREDQMMPSVISVHPSANWFEREVFDMFGILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|81676163|sp|Q5LPR5.1|NUOC_RUEPO (RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C)

HSP 1 Score: 285.804 bits (730), Expect = 2.284e-96
Identity = 130/164 (79.27%), Postives = 150/164 (91.46%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSDAL ELG ++E KR DC+L+WD+  GELNVDV  +N+   V+FL+SD++CRFS+LVDITAVDY  RAKRFDVVYHFLSMYQNQRIRLRV++RE+DMVPS+ D+HPSANWFEREVFDMFGILF+GHPDLRR+LTDYGFRG+PLRKDFPTTGYTEVRYDEAEKR
Sbjct:    1 MSDALRELGTHLELKRADCILSWDVTFGELNVDVAPSNLVDFVDFLRSDSSCRFSTLVDITAVDYPERAKRFDVVYHFLSMYQNQRIRLRVSIREDDMVPSITDVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAEKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|123172224|sp|Q163Q1.1|NUOB_ROSDO (RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B)

HSP 1 Score: 280.026 bits (715), Expect = 2.635e-94
Identity = 128/139 (92.09%), Postives = 135/139 (97.12%), Query Frame = 0 
Query:    1 MDRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            +DR+VATQ+LN  L DKGFLLTSTED+INWARTGSLHWMTFGLACCAVEMMHT+MPRYD+ERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVP 
Sbjct:   12 VDREVATQELNRELQDKGFLLTSTEDIINWARTGSLHWMTFGLACCAVEMMHTAMPRYDMERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPG 150
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|218528064|sp|Q5LPR4.2|NUOB_RUEPO (RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B)

HSP 1 Score: 277.715 bits (709), Expect = 1.923e-93
Identity = 128/139 (92.09%), Postives = 133/139 (95.68%), Query Frame = 0 
Query:    1 MDRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            +D++VATQ LNA L DKGFLLTSTED+INWARTGSLHWMTFGLACCAVEMMHTSMPRYD ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   12 VDKEVATQALNAELQDKGFLLTSTEDIINWARTGSLHWMTFGLACCAVEMMHTSMPRYDAERFGIAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 150
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|218527939|sp|A1B497.1|NUOB_PARDP (RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NADH dehydrogenase I, subunit 6; AltName: Full=NADH-quinone oxidoreductase subunit 6; Short=NQO6; AltName: Full=NDH-1 subunit B; AltName: Full=NDH-1, subunit 6)

HSP 1 Score: 273.863 bits (699), Expect = 5.783e-92
Identity = 127/138 (92.03%), Postives = 131/138 (94.93%), Query Frame = 0 
Query:    2 DRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            DRD+AT +LN  L DKGFLLT+TED+INWAR GSLHWMTFGLACCAVEMM TSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   11 DRDLATAELNRELQDKGFLLTTTEDIINWARNGSLHWMTFGLACCAVEMMQTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 148
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|266656|sp|P29918.1|NQO6_PARDE (RecName: Full=NADH-quinone oxidoreductase subunit 6; AltName: Full=NADH dehydrogenase I subunit 6; AltName: Full=NDH-1 subunit 6)

HSP 1 Score: 273.092 bits (697), Expect = 1.051e-91
Identity = 127/138 (92.03%), Postives = 131/138 (94.93%), Query Frame = 0 
Query:    2 DRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            DRD+AT +LN  L DKGFLLT+TED+INWAR GSLHWMTFGLACCAVEMM TSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   10 DRDLATAELNRELQDKGFLLTTTEDIINWARNGSLHWMTFGLACCAVEMMQTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 147
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|218528014|sp|A3PIW9.1|NUOB1_RHOS1 (RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName: Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1 subunit B 1 >gi|586830477|sp|Q3J3G0.2|NUOB1_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName: Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1 subunit B 1)

HSP 1 Score: 273.092 bits (697), Expect = 1.387e-91
Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 0 
Query:    2 DRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            DRD  TQ LN  L DKGFLLT+TEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYD+ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   12 DRDYDTQSLNRELQDKGFLLTTTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDVERFGVAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 149
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|238065016|sp|B9KQW1.1|NUOB1_RHOSK (RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName: Full=NADH dehydrogenase I subunit B 1; AltName: Full=NDH-1 subunit B 1)

HSP 1 Score: 272.707 bits (696), Expect = 1.477e-91
Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 0 
Query:    2 DRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            DRD  TQ LN  L DKGFLLT+TEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYD+ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:   10 DRDYDTQSLNRELQDKGFLLTTTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDVERFGVAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 147
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Match: gi|123077741|sp|Q1GIP1.1|NUOB_RUEST (RecName: Full=NADH-quinone oxidoreductase subunit B; AltName: Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1 subunit B)

HSP 1 Score: 272.322 bits (695), Expect = 2.164e-91
Identity = 125/139 (89.93%), Postives = 131/139 (94.24%), Query Frame = 0 
Query:    1 MDRDVATQQLNANLADKGFLLTSTEDLINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPA 139
            +D+++ TQ LNA L DKGFLLTS ED+INWARTGSLHWMTFGLACCAVEMMHTSMPRYD ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 
Sbjct:    9 VDKEMVTQALNAELQDKGFLLTSAEDIINWARTGSLHWMTFGLACCAVEMMHTSMPRYDAERFGIAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 147
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|640634656|ref|WP_025062647.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter guttiformis] >gi|751952089|gb|KIN73002.1| NADH-quinone oxidoreductase subunit C [Sulfitobacter guttiformis KCTC 32187])

HSP 1 Score: 333.954 bits (855), Expect = 9.758e-113
Identity = 159/164 (96.95%), Postives = 162/164 (98.78%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSDALTELGGYIEAKRPDCVL WDIAHGELN+DVTLANIAGLVEFLK+D TCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLV+IHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR
Sbjct:    1 MSDALTELGGYIEAKRPDCVLNWDIAHGELNLDVTLANIAGLVEFLKNDMTCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVEIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|640632273|ref|WP_025060273.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter donghicola] >gi|659498356|gb|KEJ89418.1| NADH-quinone oxidoreductase [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565] >gi|751948288|gb|KIN69236.1| NADH-quinone oxidoreductase subunit C [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565])

HSP 1 Score: 325.094 bits (832), Expect = 3.145e-109
Identity = 151/164 (92.07%), Postives = 162/164 (98.78%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSDAL ELGGYIEAKRPDCVL WD++HGELN+DVTLANIAGL+EFL++DATC+FS+LVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVRE+DMVPS+VDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRG+PLRKDFPTTGYTEVRYDEAEKR
Sbjct:    1 MSDALNELGGYIEAKRPDCVLGWDVSHGELNLDVTLANIAGLIEFLRADATCQFSTLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREDDMVPSIVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGYPLRKDFPTTGYTEVRYDEAEKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|740054855|ref|WP_037904487.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter mediterraneus] >gi|618763017|gb|KAJ04899.1| hypothetical protein PM02_01425 [Sulfitobacter mediterraneus])

HSP 1 Score: 315.849 bits (808), Expect = 1.109e-105
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MS+ L ELG YIEAKRPDCVL+W+IAHGELNVDVTLANI GLVEFLK DATCRFS+L+DITAVDY GRAKRFDVVYHFLSMYQN RIRLRVA RE+DMVPSLVD+HPSANWFERE+FDMFGILFSGHPDLRR+LTDYGFRGHPLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MSEQLQELGAYIEAKRPDCVLSWEIAHGELNVDVTLANITGLVEFLKGDATCRFSTLIDITAVDYPGRAKRFDVVYHFLSMYQNHRIRLRVAAREKDMVPSLVDVHPSANWFEREIFDMFGILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|495500824|ref|WP_008225479.1| (NADH-quinone oxidoreductase subunit C [Roseobacter sp. GAI101] >gi|214042800|gb|EEB83438.1| NADH-quinone oxidoreductase chain c [Roseobacter sp. GAI101])

HSP 1 Score: 315.079 bits (806), Expect = 2.160e-105
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MS+ L ELG Y+EAKRPDC+L WDI+HGELN+DVT AN+ GLV+F+K DATCRFSSLVDITAVDY GRAKRFDVVYHFLSMYQNQRIRLRVA+REEDMVPS+VDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR
Sbjct:    1 MSEQLNELGAYLEAKRPDCILGWDISHGELNMDVTKANLPGLVDFIKGDATCRFSSLVDITAVDYPGRAKRFDVVYHFLSMYQNQRIRLRVAIREEDMVPSIVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|640620889|ref|WP_025048936.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter mediterraneus] >gi|751955992|gb|KIN76647.1| NADH-quinone oxidoreductase subunit C [Sulfitobacter mediterraneus KCTC 32188])

HSP 1 Score: 314.309 bits (804), Expect = 4.543e-105
Identity = 145/164 (88.41%), Postives = 155/164 (94.51%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MS+ L ELG YIEAKRPDCVL+W+IAHGELNVDVTL NI GLVEFLK DATCRFS+L+DITAVDY GRAKRFDVVYHFLSMYQN RIRLRVA RE+DMVPSLVD+HPSANWFERE+FDMFGILFSGHPDLRR+LTDYGFRGHPLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MSEQLQELGAYIEAKRPDCVLSWEIAHGELNVDVTLTNITGLVEFLKGDATCRFSTLIDITAVDYPGRAKRFDVVYHFLSMYQNHRIRLRVAAREKDMVPSLVDVHPSANWFEREIFDMFGILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|640625292|ref|WP_025053307.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter noctilucae] >gi|751940463|gb|KIN61415.1| NADH-quinone oxidoreductase subunit C [Sulfitobacter noctilucae])

HSP 1 Score: 310.842 bits (795), Expect = 1.192e-103
Identity = 145/164 (88.41%), Postives = 157/164 (95.73%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            M+DAL ELG YIEAKRPDCVLAWD++  ELN+DVTLANIAGLV+FLK DATC+FS+LVDITAVDYTGRAKRFDVVYH LSMYQN RIRLRVAVRE+DMVPSLVD+HPSANWFEREVFDMFGILFSGHPDLRR+LTDYGFRG+PLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MTDALQELGAYIEAKRPDCVLAWDVSRDELNLDVTLANIAGLVDFLKGDATCQFSTLVDITAVDYTGRAKRFDVVYHLLSMYQNHRIRLRVAVREKDMVPSLVDVHPSANWFEREVFDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|1225930983|ref|WP_093924320.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter brevis] >gi|1097783791|emb|SFE65581.1| NADH dehydrogenase subunit C [Sulfitobacter brevis])

HSP 1 Score: 309.301 bits (791), Expect = 4.342e-103
Identity = 144/164 (87.80%), Postives = 154/164 (93.90%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSD L ELGGYIEAKRPDCVL WDI+ GELN+DVTL NIAGL++FLK DATCRFS+LVDITAVDYTGRAKRFDVVYH LSMYQN RIRLRVAVRE+DMVPSL D+HPSANWFEREVFDMFGILFSGHPDLRR+LTDYGFRG+PLRKDFPTTGYTEVRYDE +KR
Sbjct:    1 MSDHLQELGGYIEAKRPDCVLGWDISQGELNMDVTLTNIAGLIDFLKGDATCRFSTLVDITAVDYTGRAKRFDVVYHLLSMYQNHRIRLRVAVREKDMVPSLTDVHPSANWFEREVFDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEVQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|640629014|ref|WP_025057020.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter noctilucicola] >gi|751943729|gb|KIN64681.1| NADH-quinone oxidoreductase subunit C [Sulfitobacter noctilucicola])

HSP 1 Score: 308.531 bits (789), Expect = 1.041e-102
Identity = 143/164 (87.20%), Postives = 155/164 (94.51%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSDAL ELG YIEAKRPDCVL+WD+  GELN++VTL NIAGLVEFL+ DATCRFS+LVDITAVD+TGRAKRFDVVYH LSMYQN RIRLRVAVRE+DMVPSLVD+HPSANWFERE+FDMFGILFSGHPDLRR+LTDYGFRG+PLRKDFPTTGYTEVRYDE EKR
Sbjct:    1 MSDALQELGAYIEAKRPDCVLSWDVTRGELNLNVTLTNIAGLVEFLRGDATCRFSTLVDITAVDHTGRAKRFDVVYHLLSMYQNHRIRLRVAVREKDMVPSLVDVHPSANWFEREIFDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEVEKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|1219463533|ref|WP_089420549.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter pseudonitzschiae] >gi|1218522562|gb|ASM72677.1| NADH-quinone oxidoreductase chain 5 [Sulfitobacter pseudonitzschiae])

HSP 1 Score: 308.145 bits (788), Expect = 1.464e-102
Identity = 143/164 (87.20%), Postives = 155/164 (94.51%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MSDAL ELG YIEAKRPDCVL+WDI HGELN+D+T  NI GLVEFLK+DATCRFSSLVDITAVDYTGR KRFDVVYHFLSMYQN RIRLRV+VRE+ MVPS+V++HPSANWFEREVFDMFGILFSGHPDLRR+LTDYGFRG+PLRKDFPTTGYTEVRYDEA+KR
Sbjct:    1 MSDALKELGTYIEAKRPDCVLSWDITHGELNLDITPNNIVGLVEFLKTDATCRFSSLVDITAVDYTGRTKRFDVVYHFLSMYQNHRIRLRVSVREDAMVPSIVNVHPSANWFEREVFDMFGILFSGHPDLRRILTDYGFRGYPLRKDFPTTGYTEVRYDEAQKR 164
[Close]
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Match: gi|1270305047|gb|PHR00969.1| (NADH-quinone oxidoreductase subunit C [Sulfitobacter sp.])

HSP 1 Score: 307.76 bits (787), Expect = 1.574e-102
Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 0 
Query:  150 MSDALTELGGYIEAKRPDCVLAWDIAHGELNVDVTLANIAGLVEFLKSDATCRFSSLVDITAVDYTGRAKRFDVVYHFLSMYQNQRIRLRVAVREEDMVPSLVDIHPSANWFEREVFDMFGILFSGHPDLRRLLTDYGFRGHPLRKDFPTTGYTEVRYDEAEKR 313
            MS+ L ELG YIEAKRPDC+L W+IAH EL +DVT AN+ GLVEF+KSDATCRFSSLVDITAVDY GRAKRFDVVYHFLSMYQNQRIRLRVA REEDMVPS+VDIHPSANWFEREVFDMFGI+F+GHPDLRRLLTDYGFRG+PLRKDFPTTGYTEVRYDE+EKR
Sbjct:    1 MSEQLNELGSYIEAKRPDCILGWEIAHDELTMDVTQANLPGLVEFIKSDATCRFSSLVDITAVDYPGRAKRFDVVYHFLSMYQNQRIRLRVAAREEDMVPSIVDIHPSANWFEREVFDMFGIIFAGHPDLRRLLTDYGFRGYPLRKDFPTTGYTEVRYDESEKR 164
The following BLAST results are available for this feature:
BLAST of nadh-quinone oxidoreductase chain 5 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000018947.205e-6566.90supercontig:LSalAtl2s:LSalAtl2s1325:62473:63177:-1... [more]
EMLSAG000000102255.130e-4644.64supercontig:LSalAtl2s:LSalAtl2s679:28674:29603:-1 ... [more]
back to top
BLAST of nadh-quinone oxidoreductase chain 5 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|122398270|sp|Q1GIP0.1|NUOC_RUEST1.686e-10184.76RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|122972618|sp|Q163Q2.1|NUOC_ROSDO1.468e-9879.88RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|81676163|sp|Q5LPR5.1|NUOC_RUEPO2.284e-9679.27RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|123172224|sp|Q163Q1.1|NUOB_ROSDO2.635e-9492.09RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|218528064|sp|Q5LPR4.2|NUOB_RUEPO1.923e-9392.09RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|218527939|sp|A1B497.1|NUOB_PARDP5.783e-9292.03RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|266656|sp|P29918.1|NQO6_PARDE1.051e-9192.03RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|218528014|sp|A3PIW9.1|NUOB1_RHOS11.387e-9192.03RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|238065016|sp|B9KQW1.1|NUOB1_RHOSK1.477e-9192.03RecName: Full=NADH-quinone oxidoreductase subunit ... [more]
gi|123077741|sp|Q1GIP1.1|NUOB_RUEST2.164e-9189.93RecName: Full=NADH-quinone oxidoreductase subunit ... [more]

Pages

back to top
BLAST of nadh-quinone oxidoreductase chain 5 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|640634656|ref|WP_025062647.1|9.758e-11396.95NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|640632273|ref|WP_025060273.1|3.145e-10992.07NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|740054855|ref|WP_037904487.1|1.109e-10589.02NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|495500824|ref|WP_008225479.1|2.160e-10589.02NADH-quinone oxidoreductase subunit C [Roseobacter... [more]
gi|640620889|ref|WP_025048936.1|4.543e-10588.41NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|640625292|ref|WP_025053307.1|1.192e-10388.41NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|1225930983|ref|WP_093924320.1|4.342e-10387.80NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|640629014|ref|WP_025057020.1|1.041e-10287.20NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|1219463533|ref|WP_089420549.1|1.464e-10287.20NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]
gi|1270305047|gb|PHR00969.1|1.574e-10287.20NADH-quinone oxidoreductase subunit C [Sulfitobact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold8388_size2752supercontigscaffold8388_size2752:1762..2750 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold8388_size2752-processed-gene-0.0-mRNA-1snap_masked-scaffold8388_size2752-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold8388_size2752:1762..2750+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold8388_size2752-processed-gene-0.0 ID=snap_masked-scaffold8388_size2752-processed-gene-0.0|Name=nadh-quinone oxidoreductase chain 5|organism=Tigriopus kingsejongensis|type=gene|length=989bp|location=Sequence derived from alignment at scaffold8388_size2752:1762..2750+ (Tigriopus kingsejongensis)
ATGGACCGCGATGTGGCCACGCAGCAGCTGAACGCCAATCTGGCGGACAA
GGGTTTCCTGCTGACCTCCACCGAGGATCTGATCAACTGGGCGCGCACCG
GCTCGCTGCACTGGATGACCTTCGGTCTGGCCTGCTGTGCGGTCGAGATG
ATGCACACCTCCATGCCGCGTTATGACCTTGAACGTTTCGGCACAGCGCC
GCGCGCCTCCCCGCGCCAGTCCGATCTGATGATCGTGGCGGGGACGCTGA
CCAACAAAATGGCGCCTGCGCTGCGCAAGGTTTATGACCAGATGCCAGAG
CCGCGCTATGTGATCTCTATGGGCTCGTGCGCGAATGGCGGCGGCTATTA
CCACTACAGCTATAGCGTTGTGCGTGGATGTGACCGGATTGTACCCGTTG
ACATCTATGTGCCCGGTTGCCCCCCCACAGCAGAGGCGCTGCTGTACGGG
ATCATGCAACTACAGCGCAAAATGCGCCGGACAGGGACGATTGTACGATG
AGCGATGCACTGACCGAACTGGGTGGCTATATCGAAGCCAAACGCCCCGA
TTGCGTGCTGGCATGGGATATCGCCCATGGCGAGCTGAATGTTGACGTGA
CGCTGGCGAATATCGCGGGTCTGGTGGAGTTTTTGAAGTCTGATGCGACC
TGTCGGTTCTCCAGTCTCGTGGACATCACTGCCGTGGATTACACGGGCCG
CGCCAAGCGTTTTGACGTAGTCTACCACTTCCTGTCGATGTACCAGAACC
AGCGCATTCGTTTGCGCGTCGCTGTGCGCGAAGAGGACATGGTGCCATCG
CTGGTAGACATTCACCCCTCCGCCAACTGGTTCGAGCGTGAAGTCTTCGA
CATGTTCGGCATCCTGTTCTCCGGCCATCCCGATCTGCGCCGTTTGCTGA
CGGATTACGGTTTCCGTGGCCACCCGCTGCGCAAGGATTTCCCGACCACG
GGCTATACCGAAGTGCGCTATGACGAGGCGGAAAAGCGG
back to top
Synonyms
The feature 'nadh-quinone oxidoreductase chain 5' has the following synonyms
Synonym
Tk02580
Add to Basket