cuticular protein 10, snap_masked-scaffold850_size89018-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000002920 (supercontig:LSalAtl2s:LSalAtl2s1682:15016:15642:-1 gene:EMLSAG00000002920 transcript:EMLSAT00000002920 description:"augustus_masked-LSalAtl2s1682-processed-gene-0.0") HSP 1 Score: 72.7886 bits (177), Expect = 2.827e-17 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQA 73 KT+ + V+VM+GSY+Y+ DGQ+ V W ADE GY + LP IP+PE A+AV +QI FA EEE + Sbjct: 112 KTIGDETVVVMKGSYSYVGPDGQNYVVDWYADETGYHPSAPHLPREVSIPYPEIADAVNSQITFAAEEEAKG 183
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000003195 (supercontig:LSalAtl2s:LSalAtl2s17743:3:473:1 gene:EMLSAG00000003195 transcript:EMLSAT00000003195 description:"augustus_masked-LSalAtl2s17743-processed-gene-0.0") HSP 1 Score: 70.4774 bits (171), Expect = 8.567e-17 Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 50 VVTMTGSYEYVGKDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 111
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000012374 (supercontig:LSalAtl2s:LSalAtl2s9060:76:692:1 gene:EMLSAG00000012374 transcript:EMLSAT00000012374 description:"augustus_masked-LSalAtl2s9060-processed-gene-0.0") HSP 1 Score: 68.1662 bits (165), Expect = 7.624e-16 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQ 62 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQ Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQ 170
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000004219 (supercontig:LSalAtl2s:LSalAtl2s2225:16769:17023:-1 gene:EMLSAG00000004219 transcript:EMLSAT00000004219 description:"augustus_masked-LSalAtl2s2225-processed-gene-0.1") HSP 1 Score: 58.9214 bits (141), Expect = 4.933e-13 Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQ 71 M+GSY Y+ DGQ + W ADE GY + LP IP+PE A AV AQI FA E++ Sbjct: 1 MKGSYKYVGPDGQTYVLDWYADETGYHPSAPHLPQDVPIPYPEIANAVDAQIAFAATEKR 60
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005214 (supercontig:LSalAtl2s:LSalAtl2s27587:49:351:-1 gene:EMLSAG00000005214 transcript:EMLSAT00000005214 description:"augustus_masked-LSalAtl2s27587-processed-gene-0.0") HSP 1 Score: 58.151 bits (139), Expect = 1.281e-12 Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE-AVAAQIRFAQEEEQQAAASSNSYSSAPAPAGRYEAAAAPAQ 98 M GSY Y+ DGQ V W+ADENG++ A LP IPFPE AE A AQE+ +A++ S +PA G ++ Q Sbjct: 1 MTGSYEYVGKDGQAYVVDWIADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAIGGFQQSFGXSGQ 88
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000003401 (supercontig:LSalAtl2s:LSalAtl2s1878:5671:6427:1 gene:EMLSAG00000003401 transcript:EMLSAT00000003401 description:"augustus_masked-LSalAtl2s1878-processed-gene-0.0") HSP 1 Score: 58.9214 bits (141), Expect = 6.580e-12 Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFA 66 K V +V+VM+GSY Y+ +GQ V W ADE GY LP IP+ A AV+AQI FA Sbjct: 132 KVVGETEVVVMKGSYEYVGPNGQTYVVEWYADETGYHPSGPHLPKDVPIPYXXIANAVSAQISFA 196
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000004809 (supercontig:LSalAtl2s:LSalAtl2s25422:80:397:-1 gene:EMLSAG00000004809 transcript:EMLSAT00000004809 description:"augustus_masked-LSalAtl2s25422-processed-gene-0.0") HSP 1 Score: 54.6842 bits (130), Expect = 2.843e-11 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 M GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AE Sbjct: 1 MTGSYEYVGEDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAE 46
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005088 (supercontig:LSalAtl2s:LSalAtl2s26964:1:384:1 gene:EMLSAG00000005088 transcript:EMLSAT00000005088 description:"augustus_masked-LSalAtl2s26964-processed-gene-0.0") HSP 1 Score: 54.299 bits (129), Expect = 6.762e-11 Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 K + +V+VM+GSY Y+ DGQ V W ADE GY + LP IPFPE A+ Sbjct: 37 TKVXGDTEVVVMKGSYEYVGPDGQTYVVDWYADETGYHPSAPHLPQDVPIPFPEIAD 93
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005389 (supercontig:LSalAtl2s:LSalAtl2s29058:3:344:-1 gene:EMLSAG00000005389 transcript:EMLSAT00000005389 description:"augustus_masked-LSalAtl2s29058-processed-gene-0.0") HSP 1 Score: 53.9138 bits (128), Expect = 7.703e-11 Identity = 29/62 (46.77%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M DGQ V W+ADENG+ +A LP IPF E AEAV AQI FA +E+ Sbjct: 51 VVTMXXXXXXXXEDGQXYVVDWIADENGFXPSAAXLPKEVPIPFSEIAEAVEAQIAFAAQED 112
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000009794 (supercontig:LSalAtl2s:LSalAtl2s6385:2949:3906:1 gene:EMLSAG00000009794 transcript:EMLSAT00000009794 description:"snap_masked-LSalAtl2s6385-processed-gene-0.1") HSP 1 Score: 55.8398 bits (133), Expect = 1.085e-10 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFA 66 V+VM+GSY YI DGQ V W+ADENG++ P P IP E +AV AQI FA Sbjct: 122 VVVMKGSYEYIGDDGQIYVVDWIADENGFQ------PSGPHIP-KEIXDAVQAQIVFA 172
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|5921936|sp|P81576.1|CUPA2_CANPG (RecName: Full=Cuticle protein AM1159; Short=CPAM1159) HSP 1 Score: 50.447 bits (119), Expect = 4.781e-8 Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQA 73 M+G++ ++ DG V +VADE GYR ES +LP+ PE+P V +R A+E+ Q Sbjct: 45 MQGTFRFLLPDGTTAEVRYVADEFGYRPESPLLPVGPELP-----PHVHELLRIAEEQRAQG 101
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|47605413|sp|Q7M4F3.1|CUD2_SCHGR (RecName: Full=Endocuticle structural glycoprotein SgAbd-2) HSP 1 Score: 47.7506 bits (112), Expect = 7.251e-7 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 ++G+++Y DG +++ +VADENG+RAE A LP P IP Sbjct: 66 VQGTFSYTAPDGTPISLRYVADENGFRAEGAHLPTPPPIP 105
BLAST of cuticular protein 10 vs. nr
Match: gi|225713618|gb|ACO12655.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 75.0998 bits (183), Expect = 7.498e-14 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ V+ M+GSY Y+ ADGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 134 TIGEESVVTMKGSYEYVGADGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 201
BLAST of cuticular protein 10 vs. nr
Match: gi|155966344|gb|ABU41124.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 73.1738 bits (178), Expect = 9.678e-14 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASS 77 V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI FA +E+ SS Sbjct: 47 VVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQEDAATGGSS 115
BLAST of cuticular protein 10 vs. nr
Match: gi|155966332|gb|ABU41118.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.884e-13 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASSNSYSSA 83 T+ V+ M+GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ A S+ SA Sbjct: 81 TIGEESVVTMKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED-AAGGSAGKVGSA 160
BLAST of cuticular protein 10 vs. nr
Match: gi|155966336|gb|ABU41120.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 72.4034 bits (176), Expect = 4.545e-13 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI FA +E+ Sbjct: 121 TIGEESVVVMKGSYEYIGDDGQKYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQED 188
BLAST of cuticular protein 10 vs. nr
Match: gi|155966118|gb|ABU41014.1| (cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 71.633 bits (174), Expect = 7.753e-13 Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M+GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 87 VVTMKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 148
BLAST of cuticular protein 10 vs. nr
Match: gi|225713430|gb|ACO12561.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 69.707 bits (169), Expect = 7.862e-12 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQI 63 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAV AQI Sbjct: 114 TIGADNVVVMKGSYEYIGDDGQTYAVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVEAQI 174
BLAST of cuticular protein 10 vs. nr
Match: gi|1325285367|ref|XP_023327399.1| (endocuticle structural glycoprotein ABD-4-like [Eurytemora affinis]) HSP 1 Score: 67.0106 bits (162), Expect = 3.173e-11 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRF 65 MK +D+ +VMVMRGSY+Y+ DGQ V W ADE G+ +A LP + E PE A AV AQ+ F Sbjct: 106 MKVIDDSEVMVMRGSYSYVGPDGQTYQVDWYADETGFHPTAAHLPKSVEPDHPEVAAAVRAQLEF 170
BLAST of cuticular protein 10 vs. nr
Match: gi|155966228|gb|ABU41068.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 66.6254 bits (161), Expect = 1.178e-10 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQI 63 V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI Sbjct: 120 VVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQI 174
BLAST of cuticular protein 10 vs. nr
Match: gi|225714408|gb|ACO13050.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 65.4698 bits (158), Expect = 2.870e-10 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASSNSYSSAPAPAGRYEAAAAPAQPNYERLNNQWPG 110 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQI FA EE+ AA S++S + G ++ ++ Q Q G Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQIAFAAEED--AANGGPSFNSGSSFNGGFQGQSSGFQGQSSGFQGQSSG 216
BLAST of cuticular protein 10 vs. nr
Match: gi|768408825|ref|XP_011549436.1| (PREDICTED: larval cuticle protein LCP-17-like [Plutella xylostella]) HSP 1 Score: 63.929 bits (154), Expect = 5.635e-10 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 +K VDN + +V+RGSY Y+ DG V V ++ADENG++ E +LP+AP IP Sbjct: 140 LKRVDNTEAVVVRGSYRYVAPDGTPVEVRYIADENGFQPEGNVLPVAPAIP 190 The following BLAST results are available for this feature:
BLAST of cuticular protein 10 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of cuticular protein 10 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of cuticular protein 10 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold850_size89018:35197..45990+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold850_size89018-processed-gene-0.2 ID=snap_masked-scaffold850_size89018-processed-gene-0.2|Name=cuticular protein 10|organism=Tigriopus kingsejongensis|type=gene|length=10794bp|location=Sequence derived from alignment at scaffold850_size89018:35197..45990+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticular protein 10' has the following synonyms
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