cuticular protein 10, snap_masked-scaffold850_size89018-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000002920 (supercontig:LSalAtl2s:LSalAtl2s1682:15016:15642:-1 gene:EMLSAG00000002920 transcript:EMLSAT00000002920 description:"augustus_masked-LSalAtl2s1682-processed-gene-0.0") HSP 1 Score: 72.7886 bits (177), Expect = 2.827e-17 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQA 73 KT+ + V+VM+GSY+Y+ DGQ+ V W ADE GY + LP IP+PE A+AV +QI FA EEE + Sbjct: 112 KTIGDETVVVMKGSYSYVGPDGQNYVVDWYADETGYHPSAPHLPREVSIPYPEIADAVNSQITFAAEEEAKG 183
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000003195 (supercontig:LSalAtl2s:LSalAtl2s17743:3:473:1 gene:EMLSAG00000003195 transcript:EMLSAT00000003195 description:"augustus_masked-LSalAtl2s17743-processed-gene-0.0") HSP 1 Score: 70.4774 bits (171), Expect = 8.567e-17 Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 50 VVTMTGSYEYVGKDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 111
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000012374 (supercontig:LSalAtl2s:LSalAtl2s9060:76:692:1 gene:EMLSAG00000012374 transcript:EMLSAT00000012374 description:"augustus_masked-LSalAtl2s9060-processed-gene-0.0") HSP 1 Score: 68.1662 bits (165), Expect = 7.624e-16 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQ 62 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQ Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQ 170
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000004219 (supercontig:LSalAtl2s:LSalAtl2s2225:16769:17023:-1 gene:EMLSAG00000004219 transcript:EMLSAT00000004219 description:"augustus_masked-LSalAtl2s2225-processed-gene-0.1") HSP 1 Score: 58.9214 bits (141), Expect = 4.933e-13 Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQ 71 M+GSY Y+ DGQ + W ADE GY + LP IP+PE A AV AQI FA E++ Sbjct: 1 MKGSYKYVGPDGQTYVLDWYADETGYHPSAPHLPQDVPIPYPEIANAVDAQIAFAATEKR 60
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005214 (supercontig:LSalAtl2s:LSalAtl2s27587:49:351:-1 gene:EMLSAG00000005214 transcript:EMLSAT00000005214 description:"augustus_masked-LSalAtl2s27587-processed-gene-0.0") HSP 1 Score: 58.151 bits (139), Expect = 1.281e-12 Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE-AVAAQIRFAQEEEQQAAASSNSYSSAPAPAGRYEAAAAPAQ 98 M GSY Y+ DGQ V W+ADENG++ A LP IPFPE AE A AQE+ +A++ S +PA G ++ Q Sbjct: 1 MTGSYEYVGKDGQAYVVDWIADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAIGGFQQSFGXSGQ 88
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000003401 (supercontig:LSalAtl2s:LSalAtl2s1878:5671:6427:1 gene:EMLSAG00000003401 transcript:EMLSAT00000003401 description:"augustus_masked-LSalAtl2s1878-processed-gene-0.0") HSP 1 Score: 58.9214 bits (141), Expect = 6.580e-12 Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFA 66 K V +V+VM+GSY Y+ +GQ V W ADE GY LP IP+ A AV+AQI FA Sbjct: 132 KVVGETEVVVMKGSYEYVGPNGQTYVVEWYADETGYHPSGPHLPKDVPIPYXXIANAVSAQISFA 196
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000004809 (supercontig:LSalAtl2s:LSalAtl2s25422:80:397:-1 gene:EMLSAG00000004809 transcript:EMLSAT00000004809 description:"augustus_masked-LSalAtl2s25422-processed-gene-0.0") HSP 1 Score: 54.6842 bits (130), Expect = 2.843e-11 Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 M GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AE Sbjct: 1 MTGSYEYVGEDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAE 46
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005088 (supercontig:LSalAtl2s:LSalAtl2s26964:1:384:1 gene:EMLSAG00000005088 transcript:EMLSAT00000005088 description:"augustus_masked-LSalAtl2s26964-processed-gene-0.0") HSP 1 Score: 54.299 bits (129), Expect = 6.762e-11 Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 K + +V+VM+GSY Y+ DGQ V W ADE GY + LP IPFPE A+ Sbjct: 37 TKVXGDTEVVVMKGSYEYVGPDGQTYVVDWYADETGYHPSAPHLPQDVPIPFPEIAD 93
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005389 (supercontig:LSalAtl2s:LSalAtl2s29058:3:344:-1 gene:EMLSAG00000005389 transcript:EMLSAT00000005389 description:"augustus_masked-LSalAtl2s29058-processed-gene-0.0") HSP 1 Score: 53.9138 bits (128), Expect = 7.703e-11 Identity = 29/62 (46.77%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M DGQ V W+ADENG+ +A LP IPF E AEAV AQI FA +E+ Sbjct: 51 VVTMXXXXXXXXEDGQXYVVDWIADENGFXPSAAXLPKEVPIPFSEIAEAVEAQIAFAAQED 112
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000009794 (supercontig:LSalAtl2s:LSalAtl2s6385:2949:3906:1 gene:EMLSAG00000009794 transcript:EMLSAT00000009794 description:"snap_masked-LSalAtl2s6385-processed-gene-0.1") HSP 1 Score: 55.8398 bits (133), Expect = 1.085e-10 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFA 66 V+VM+GSY YI DGQ V W+ADENG++ P P IP E +AV AQI FA Sbjct: 122 VVVMKGSYEYIGDDGQIYVVDWIADENGFQ------PSGPHIP-KEIXDAVQAQIVFA 172
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|5921936|sp|P81576.1|CUPA2_CANPG (RecName: Full=Cuticle protein AM1159; Short=CPAM1159) HSP 1 Score: 50.447 bits (119), Expect = 4.781e-8 Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQA 73 M+G++ ++ DG V +VADE GYR ES +LP+ PE+P V +R A+E+ Q Sbjct: 45 MQGTFRFLLPDGTTAEVRYVADEFGYRPESPLLPVGPELP-----PHVHELLRIAEEQRAQG 101
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|47605413|sp|Q7M4F3.1|CUD2_SCHGR (RecName: Full=Endocuticle structural glycoprotein SgAbd-2) HSP 1 Score: 47.7506 bits (112), Expect = 7.251e-7 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 ++G+++Y DG +++ +VADENG+RAE A LP P IP Sbjct: 66 VQGTFSYTAPDGTPISLRYVADENGFRAEGAHLPTPPPIP 105
BLAST of cuticular protein 10 vs. nr
Match: gi|290563078|gb|ADD38933.1| (Cuticle protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 63.929 bits (154), Expect = 7.721e-10 Identity = 38/91 (41.76%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE-AVAAQIRFAQEEEQQAAASSNSYSSAPAPAGRYEAAAAPAQ 98 V+ M GSY Y+ DGQ V WVADENG++ A LP IPFPE AE A AQE+ +A++ S +PA G ++ A Q Sbjct: 117 VVTMTGSYQYVGEDGQTYVVDWVADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAQEDAALGSATTGGLSGSPAAGGFQQSFGASGQ 207
BLAST of cuticular protein 10 vs. nr
Match: gi|768408827|ref|XP_011549446.1| (PREDICTED: larval cuticle protein III/IV-like [Plutella xylostella]) HSP 1 Score: 62.3882 bits (150), Expect = 1.644e-9 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 ++ VDN+D + ++GSY Y DG V V++VADENGY+ +S +LP+AP IP Sbjct: 115 LRKVDNIDTVAVQGSYKYTAPDGTPVQVTYVADENGYQPQSNLLPVAPAIP 165
BLAST of cuticular protein 10 vs. nr
Match: gi|1325285407|ref|XP_023327421.1| (actin cytoskeleton-regulatory complex protein pan1-like [Eurytemora affinis]) HSP 1 Score: 63.1586 bits (152), Expect = 3.610e-9 Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILP--IAPEIPFPEQAEAVAAQIRFAQEEEQQAAASSNSYSSA 83 MKTVD+ +V VM+GSY+YI ADG D V W ADE G+ A + LP + P+ PE A AV AQI FA E++ AAAS S S A Sbjct: 315 MKTVDDNEVSVMQGSYSYIGADGLDYLVEWYADETGFHATAPHLPQSVVPD--HPEVAAAVRAQIAFAAEQDAAAAASGRSTSYA 397
BLAST of cuticular protein 10 vs. nr
Match: gi|225713878|gb|ACO12785.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 62.3882 bits (150), Expect = 3.660e-9 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQI FA EE+ Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQIAFAAEED 178
BLAST of cuticular protein 10 vs. nr
Match: gi|155966248|gb|ABU41078.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 62.3882 bits (150), Expect = 3.675e-9 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQI FA EE+ Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQIAFAAEED 178
BLAST of cuticular protein 10 vs. nr
Match: gi|290462295|gb|ADD24195.1| (Larval cuticle protein 8 [Lepeophtheirus salmonis]) HSP 1 Score: 62.003 bits (149), Expect = 4.356e-9 Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQ-AAASSNSYSSAPAPAGRYEAAAAPAQ 98 V+ M GSY Y+ DGQ V W+ADENG++ A LP IPFPE AEAVAAQI FA E+ +A++ S +PA G ++ A Q Sbjct: 125 VVTMTGSYEYVGKDGQTYVVDWIADENGFQPSGAHLPKEVPIPFPEIAEAVAAQIAFAAREDAAVGSATTGGLSGSPATGGFQQSFGASGQ 215
BLAST of cuticular protein 10 vs. nr
Match: gi|242024816|ref|XP_002432822.1| (Endocuticle structural glycoprotein SgAbd-2, putative [Pediculus humanus corporis] >gi|212518331|gb|EEB20084.1| Endocuticle structural glycoprotein SgAbd-2, putative [Pediculus humanus corporis]) HSP 1 Score: 60.077 bits (144), Expect = 5.910e-9 Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0 Query: 10 MVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVA 60 + ++G+++Y+D DG +TV++VADENG+RA+ A LP AP IP PE EA+A Sbjct: 70 LAVQGTFSYVDLDGNQITVNYVADENGFRADGAHLPQAPPIP-PEIQEALA 119
BLAST of cuticular protein 10 vs. nr
Match: gi|170062062|ref|XP_001866507.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167880078|gb|EDS43461.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 58.151 bits (139), Expect = 1.332e-8 Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIA 47 K D+V+ +V+RGSYT+ ADGQ TV++VADENG++ E A LP+A Sbjct: 60 KLADDVEALVVRGSYTFTGADGQVYTVNYVADENGFQPEGAHLPVA 105
BLAST of cuticular protein 10 vs. nr
Match: gi|1339087196|ref|XP_023704666.1| (endocuticle structural glycoprotein SgAbd-8-like [Cryptotermes secundus]) HSP 1 Score: 59.6918 bits (143), Expect = 1.485e-8 Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 4 VDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP--FPEQAEAVAAQIRFAQEEE 70 ++N + +V GSY+Y DG +TV++ ADE G+RAE A LP P IP + + + QIR QE+E Sbjct: 93 IENEEALVQHGSYSYTAPDGSIITVTYTADEQGFRAEGAHLPTPPPIPAEIQKSLDIIYEQIRLQQEQE 161
BLAST of cuticular protein 10 vs. nr
Match: gi|546686360|gb|ERL95659.1| (hypothetical protein D910_00084, partial [Dendroctonus ponderosae]) HSP 1 Score: 58.151 bits (139), Expect = 1.752e-8 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0 Query: 6 NVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 + + V++GSY+Y DG +TV+WVADENG+RAE A LP P IP Sbjct: 22 DTEAEVIQGSYSYTAPDGTPITVNWVADENGFRAEGAHLPTPPPIP 67 The following BLAST results are available for this feature:
BLAST of cuticular protein 10 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of cuticular protein 10 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of cuticular protein 10 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold850_size89018:35197..45990+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold850_size89018-processed-gene-0.2 ID=snap_masked-scaffold850_size89018-processed-gene-0.2|Name=cuticular protein 10|organism=Tigriopus kingsejongensis|type=gene|length=10794bp|location=Sequence derived from alignment at scaffold850_size89018:35197..45990+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticular protein 10' has the following synonyms
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