cuticular protein 10, snap_masked-scaffold850_size89018-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000010209 (supercontig:LSalAtl2s:LSalAtl2s6795:388:969:-1 gene:EMLSAG00000010209 transcript:EMLSAT00000010209 description:"maker-LSalAtl2s6795-snap-gene-0.2") HSP 1 Score: 50.8322 bits (120), Expect = 1.935e-9 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQ 55 V+V++GSY YI DGQ V W+ADENG++ + LP +PFP Q Sbjct: 56 VVVIKGSYEYIGTDGQTDVVDWIADENGFQPSAPHLP--KNVPFPSQ 100
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005626 (supercontig:LSalAtl2s:LSalAtl2s3024:4654:5201:1 gene:EMLSAG00000005626 transcript:EMLSAT00000005626 description:"maker-LSalAtl2s3024-snap-gene-0.3") HSP 1 Score: 50.447 bits (119), Expect = 3.090e-9 Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 K V + +V+ M+GSY Y+ D Q V W ADE GY + LP IP+PE A+ Sbjct: 51 KVVGDTEVVXMKGSYEYVGPDAQTYVVDWYADETGYHPSAPHLPKDVPIPYPEIAD 106
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000002884 (supercontig:LSalAtl2s:LSalAtl2s166:322642:323072:-1 gene:EMLSAG00000002884 transcript:EMLSAT00000002884 description:"maker-LSalAtl2s166-augustus-gene-3.17") HSP 1 Score: 46.595 bits (109), Expect = 6.041e-8 Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 K V N +++ M+G Y ++ DGQ V+W ADENGY P AP +P Sbjct: 68 KLVGNEEIVTMKGYYEFVADDGQTYGVNWYADENGYH------PSAPHLP 111
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000006452 (supercontig:LSalAtl2s:LSalAtl2s3530:8952:9665:-1 gene:EMLSAG00000006452 transcript:EMLSAT00000006452 description:"maker-LSalAtl2s3530-augustus-gene-0.2") HSP 1 Score: 47.7506 bits (112), Expect = 6.590e-8 Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0 Query: 2 KTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAE 57 K + + +V+VM+GSY Y+ DGQ V W ADE G + LP P+PE A+ Sbjct: 107 KLIGDTEVVVMKGSYEYVGPDGQTYVVDWYADETGXHPXAPHLPQDVPXPYPEIAD 162
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000011961 (supercontig:LSalAtl2s:LSalAtl2s84:1186001:1208377:1 gene:EMLSAG00000011961 transcript:EMLSAT00000011961 description:"maker-LSalAtl2s84-snap-gene-12.12") HSP 1 Score: 47.3654 bits (111), Expect = 1.231e-7 Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 +KT D V +RG Y YIDA+G TV +++D+ G+R + LPI PE P Sbjct: 69 VKTADGV----VRGKYKYIDANGILQTVYYISDDKGFRVXXSNLPIXPEEP 115 HSP 2 Score: 46.595 bits (109), Expect = 2.595e-7 Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 0 Query: 11 VMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAV--AAQIRFAQEEEQQ 72 +RGSY YIDADG TV +VAD+ G+R + +P+A E V ++R A+EE Q Sbjct: 297 TVRGSYDYIDADGNVQTVHYVADKEGFRVKGTNIPVA-------NQEVVQDTPEVRKAREEHFQ 353
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000010771 (supercontig:LSalAtl2s:LSalAtl2s7133:2306:2659:1 gene:EMLSAG00000010771 transcript:EMLSAT00000010771 description:"augustus_masked-LSalAtl2s7133-processed-gene-0.0") HSP 1 Score: 45.4394 bits (106), Expect = 1.399e-7 Identity = 21/51 (41.18%), Postives = 28/51 (54.90%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 M + DV+ M+GSY ++ DGQ V+W ADE G+ P AP IP Sbjct: 68 MTRIGEEDVVTMKGSYEFVGDDGQIYIVTWYADETGFH------PSAPHIP 112
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000005846 (supercontig:LSalAtl2s:LSalAtl2s31700:2:298:1 gene:EMLSAG00000005846 transcript:EMLSAT00000005846 description:"augustus_masked-LSalAtl2s31700-processed-gene-0.0") HSP 1 Score: 43.5134 bits (101), Expect = 6.551e-7 Identity = 17/36 (47.22%), Postives = 24/36 (66.67%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYR 38 T+ V+ M+GSY Y+ DGQ V W+ADENG++ Sbjct: 63 TIGEESVVTMKGSYEYVGPDGQTYVVDWIADENGFQ 98
BLAST of cuticular protein 10 vs. L. salmonis genes
Match: EMLSAG00000011034 (supercontig:LSalAtl2s:LSalAtl2s743:38931:72657:1 gene:EMLSAG00000011034 transcript:EMLSAT00000011034 description:"maker-LSalAtl2s743-augustus-gene-0.7") HSP 1 Score: 45.4394 bits (106), Expect = 7.507e-7 Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQI 63 + G Y Y+DA+G +VS+VAD G+R + LPIAPE+P E A+A + Sbjct: 123 VAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAPEVPETEPLAALAVLL 174
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|5921936|sp|P81576.1|CUPA2_CANPG (RecName: Full=Cuticle protein AM1159; Short=CPAM1159) HSP 1 Score: 50.447 bits (119), Expect = 4.781e-8 Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQA 73 M+G++ ++ DG V +VADE GYR ES +LP+ PE+P V +R A+E+ Q Sbjct: 45 MQGTFRFLLPDGTTAEVRYVADEFGYRPESPLLPVGPELP-----PHVHELLRIAEEQRAQG 101
BLAST of cuticular protein 10 vs. SwissProt
Match: gi|47605413|sp|Q7M4F3.1|CUD2_SCHGR (RecName: Full=Endocuticle structural glycoprotein SgAbd-2) HSP 1 Score: 47.7506 bits (112), Expect = 7.251e-7 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 0 Query: 12 MRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 ++G+++Y DG +++ +VADENG+RAE A LP P IP Sbjct: 66 VQGTFSYTAPDGTPISLRYVADENGFRAEGAHLPTPPPIP 105
BLAST of cuticular protein 10 vs. nr
Match: gi|225713618|gb|ACO12655.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 75.0998 bits (183), Expect = 7.498e-14 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ V+ M+GSY Y+ ADGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 134 TIGEESVVTMKGSYEYVGADGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 201
BLAST of cuticular protein 10 vs. nr
Match: gi|155966344|gb|ABU41124.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 73.1738 bits (178), Expect = 9.678e-14 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASS 77 V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI FA +E+ SS Sbjct: 47 VVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQEDAATGGSS 115
BLAST of cuticular protein 10 vs. nr
Match: gi|155966332|gb|ABU41118.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.884e-13 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASSNSYSSA 83 T+ V+ M+GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ A S+ SA Sbjct: 81 TIGEESVVTMKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED-AAGGSAGKVGSA 160
BLAST of cuticular protein 10 vs. nr
Match: gi|155966336|gb|ABU41120.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 72.4034 bits (176), Expect = 4.545e-13 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 T+ V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI FA +E+ Sbjct: 121 TIGEESVVVMKGSYEYIGDDGQKYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQIAFAAQED 188
BLAST of cuticular protein 10 vs. nr
Match: gi|155966118|gb|ABU41014.1| (cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 71.633 bits (174), Expect = 7.753e-13 Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEE 70 V+ M+GSY Y+ DGQ V W+ADENG++ +A LP IPFPE AEAV AQI FA +E+ Sbjct: 87 VVTMKGSYEYVGPDGQTYVVDWIADENGFQPSAAHLPKDVPIPFPEIAEAVEAQIAFAAQED 148
BLAST of cuticular protein 10 vs. nr
Match: gi|225713430|gb|ACO12561.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 69.707 bits (169), Expect = 7.862e-12 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQI 63 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAV AQI Sbjct: 114 TIGADNVVVMKGSYEYIGDDGQTYAVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVEAQI 174
BLAST of cuticular protein 10 vs. nr
Match: gi|1325285367|ref|XP_023327399.1| (endocuticle structural glycoprotein ABD-4-like [Eurytemora affinis]) HSP 1 Score: 67.0106 bits (162), Expect = 3.173e-11 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRF 65 MK +D+ +VMVMRGSY+Y+ DGQ V W ADE G+ +A LP + E PE A AV AQ+ F Sbjct: 106 MKVIDDSEVMVMRGSYSYVGPDGQTYQVDWYADETGFHPTAAHLPKSVEPDHPEVAAAVRAQLEF 170
BLAST of cuticular protein 10 vs. nr
Match: gi|155966228|gb|ABU41068.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 66.6254 bits (161), Expect = 1.178e-10 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0 Query: 9 VMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQI 63 V+VM+GSY YI DGQ V W+ADENG++ + LP IPFPE AEAV AQI Sbjct: 120 VVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAPHLPKEVPIPFPEIAEAVEAQI 174
BLAST of cuticular protein 10 vs. nr
Match: gi|225714408|gb|ACO13050.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 65.4698 bits (158), Expect = 2.870e-10 Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 0 Query: 3 TVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIPFPEQAEAVAAQIRFAQEEEQQAAASSNSYSSAPAPAGRYEAAAAPAQPNYERLNNQWPG 110 T+ +V+VM+GSY YI DGQ V W+ADENG++ +A LP IPFPE AEAVAAQI FA EE+ AA S++S + G ++ ++ Q Q G Sbjct: 111 TIGADNVVVMKGSYEYIGDDGQTYVVDWIADENGFQPSAAHLPKEVPIPFPEIAEAVAAQIAFAAEED--AANGGPSFNSGSSFNGGFQGQSSGFQGQSSGFQGQSSG 216
BLAST of cuticular protein 10 vs. nr
Match: gi|768408825|ref|XP_011549436.1| (PREDICTED: larval cuticle protein LCP-17-like [Plutella xylostella]) HSP 1 Score: 63.929 bits (154), Expect = 5.635e-10 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0 Query: 1 MKTVDNVDVMVMRGSYTYIDADGQDVTVSWVADENGYRAESAILPIAPEIP 51 +K VDN + +V+RGSY Y+ DG V V ++ADENG++ E +LP+AP IP Sbjct: 140 LKRVDNTEAVVVRGSYRYVAPDGTPVEVRYIADENGFQPEGNVLPVAPAIP 190 The following BLAST results are available for this feature:
BLAST of cuticular protein 10 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of cuticular protein 10 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of cuticular protein 10 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold850_size89018:35197..45990+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold850_size89018-processed-gene-0.2 ID=snap_masked-scaffold850_size89018-processed-gene-0.2|Name=cuticular protein 10|organism=Tigriopus kingsejongensis|type=gene|length=10794bp|location=Sequence derived from alignment at scaffold850_size89018:35197..45990+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticular protein 10' has the following synonyms
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