hypothetical protein GUITHDRAFT_59363 partial, snap_masked-scaffold857_size87770-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|551662101|ref|XP_005833816.1| (hypothetical protein GUITHDRAFT_59363, partial [Guillardia theta CCMP2712] >gi|428177959|gb|EKX46836.1| hypothetical protein GUITHDRAFT_59363, partial [Guillardia theta CCMP2712]) HSP 1 Score: 71.2478 bits (173), Expect = 1.750e-11 Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMS 93 SS+ PP+ +SE PP+E ET PP+ SE PP++ E PP+ SE PP E E PP+ S+ P+E GPP S Sbjct: 1 GSSQTGPPRGGTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTS 93 HSP 2 Score: 64.6994 bits (156), Expect = 3.172e-9 Identity = 31/86 (36.05%), Postives = 42/86 (48.84%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKG 86 +SE PP+E E PP+ +SET PP+E E PP+ SE PP++ E PP E PP+E + P+ S G Sbjct: 11 GTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTSETGPPREGYRETGPPRGGTSETG 96
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|743927067|ref|XP_011007708.1| (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X6 [Populus euphratica]) HSP 1 Score: 68.9366 bits (167), Expect = 2.267e-8 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHT----PLEKTSEEISSLETSSEKSP 118 M E+ PP+EM +E+ PP+EM E PP+E E+APP++ E+ PP + E P+E E+EPP+E+ +++ P+E + PP E HT P E EE ET +E++P Sbjct: 621 MCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPP-----QETHTEEAPPQETCMEEAPPQETPTEEAP 737 HSP 2 Score: 67.3958 bits (163), Expect = 6.696e-8 Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSPSEGGQEQ 125 M +E+ PP+EM E+ PP+EM E PP+E E+APP + E+ P++ E +PP+E +E+EPP+E+ ++ P+E + + PP E P E +EE E +E+ P + Q Q Sbjct: 631 MRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPPQETHTEEAPPQET-CMEEAPPQETPTEEAPPQEMHTEEVPPQEMQLQ 754 HSP 3 Score: 66.6254 bits (161), Expect = 1.151e-7 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 3 SEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSP 118 S+ + P+EM +E+ PP+EM E PP+E +E+APP++ E+ PP++ E PP+E +E+ PP E+ ++ P+E + PP M E P E EE ET +E++P Sbjct: 603 SQALTPQEMHAEEAPPEEMCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQ-EMQMEEEPPQEMCREEAPPQETHTEEAP 717 HSP 4 Score: 64.6994 bits (156), Expect = 4.320e-7 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSP 118 M +E+ PP+EM E+ PP+EM +E PP+E E+APP++ E+ PP++ E PP E E+ P+E+ +++ P+E + PP M E P E +EE ET E++P Sbjct: 611 MHAEEAPPEEMCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQ-EMCREEAPPQETHTEEAPPQETCMEEAP 727
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|743927061|ref|XP_011007705.1| (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X3 [Populus euphratica]) HSP 1 Score: 68.5514 bits (166), Expect = 2.980e-8 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHT----PLEKTSEEISSLETSSEKSP 118 M E+ PP+EM +E+ PP+EM E PP+E E+APP++ E+ PP + E P+E E+EPP+E+ +++ P+E + PP E HT P E EE ET +E++P Sbjct: 743 MCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPP-----QETHTEEAPPQETCMEEAPPQETPTEEAP 859 HSP 2 Score: 67.3958 bits (163), Expect = 8.417e-8 Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSPSEGGQEQ 125 M +E+ PP+EM E+ PP+EM E PP+E E+APP + E+ P++ E +PP+E +E+EPP+E+ ++ P+E + + PP E P E +EE E +E+ P + Q Q Sbjct: 753 MRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPPQETHTEEAPPQETCMEEA-PPQETPTEEAPPQEMHTEEVPPQEMQLQ 876 HSP 3 Score: 65.0846 bits (157), Expect = 4.332e-7 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSP 118 M +E+ P+ M +E+ PP+EM E PP+E +E+APP++ E+ PP++ E PP+E +E+ PP E+ ++ P+E + PP M E P E EE ET +E++P Sbjct: 723 MQTEEALPQAMQAEEAPPEEMCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQ-EMQMEEEPPQEMCREEAPPQETHTEEAP 839 HSP 4 Score: 64.3142 bits (155), Expect = 6.001e-7 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 0 Query: 1 MSSEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSP 118 M +E+ PP+EM E+ PP+EM +E PP+E E+APP++ E+ PP++ E PP E E+ P+E+ +++ P+E + PP M E P E +EE ET E++P Sbjct: 733 MQAEEAPPEEMCPEEAPPEEMRTEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQ-EMCREEAPPQETHTEEAPPQETCMEEAP 849
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|929096229|ref|XP_014059018.1| (PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Salmo salar]) HSP 1 Score: 66.6254 bits (161), Expect = 1.458e-7 Identity = 43/167 (25.75%), Postives = 87/167 (52.10%), Query Frame = 0 Query: 7 PPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMS-----SENHTPLEKTSEEISSLETSSEK-SPSEGGQEQDGLTKSLTFATEAKET---LPAETPDLLPSLLMNEIYPSTPQ 164 PP++ + PP++ + PP++AI+ PP+ AI+ PP+ AI+ PP++AI +PP++ I++ P++AI+ PP ++ + TP++ + I+ ++ + +P + T T+ +T +P ++P LP + +I P++PQ Sbjct: 1138 PPQQAIARVQPPQQAIARVQPPQQAIARVQPPQQAIARVQPPQQAIARVQPPQQAIARVQPPQQAIARVQPPQQAIAPVQPPQQAIAPVQPPQQAITPVQPPQQAITPVQPPQQAITPVQPPALAPAPPPVSTHQTQPPQTQVHIPLQSPTALPIQQITQI-PTSPQ 1303
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|743927065|ref|XP_011007707.1| (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X5 [Populus euphratica]) HSP 1 Score: 65.855 bits (159), Expect = 2.326e-7 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 3 SEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSPSEGGQEQ 125 +E+ PP+EM E+ PP+EM E PP+E E+APP + E+ P++ E +PP+E +E+EPP+E+ ++ P+E + + PP E P E +EE E +E+ P + Q Q Sbjct: 651 TEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPPQETHTEEAPPQET-CMEEAPPQETPTEEAPPQEMHTEEVPPQEMQLQ 772
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Match: gi|743927051|ref|XP_011007700.1| (PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Populus euphratica] >gi|743927053|ref|XP_011007701.1| PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Populus euphratica] >gi|743927055|ref|XP_011007702.1| PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Populus euphratica] >gi|743927057|ref|XP_011007703.1| PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Populus euphratica]) HSP 1 Score: 65.4698 bits (158), Expect = 2.814e-7 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 3 SEKMPPKEMSSEKMPPKEMSSETMPPKEAISEKAPPKDAISEKVPPKDAISENDPPEEAILEKEPPKEVISKKDHPKEAISAKGPPALVMSSENHTPLEKTSEEISSLETSSEKSPSEGGQEQ 125 +E+ PP+EM E+ PP+EM E PP+E E+APP + E+ P++ E +PP+E +E+EPP+E+ ++ P+E + + PP E P E +EE E +E+ P + Q Q Sbjct: 773 TEEAPPQEMQMEEAPPQEMCREEAPPQEMQMEEAPPHEMCREEALPQEMCREEEPPQEMQMEEEPPQEMCREEAPPQETHTEEAPPQETCMEEA-PPQETPTEEAPPQEMHTEEVPPQEMQLQ 894 The following BLAST results are available for this feature:
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein GUITHDRAFT_59363 partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 6
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold857_size87770:18572..20485+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold857_size87770-processed-gene-0.2 ID=snap_masked-scaffold857_size87770-processed-gene-0.2|Name=hypothetical protein GUITHDRAFT_59363 partial|organism=Tigriopus kingsejongensis|type=gene|length=1914bp|location=Sequence derived from alignment at scaffold857_size87770:18572..20485+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein GUITHDRAFT_59363 partial' has the following synonyms
Add to Basket
|