---NA---, snap_masked-scaffold85_size395806-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Name---NA---
Unique Namesnap_masked-scaffold85_size395806-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of ---NA--- vs. nr
Match: gi|1325253533|ref|XP_023319673.1| (uncharacterized protein LOC111694839 isoform X1 [Eurytemora affinis])

HSP 1 Score: 138.272 bits (347), Expect = 3.978e-29
Identity = 121/330 (36.67%), Postives = 173/330 (52.42%), Query Frame = 0 
Query:  366 KYFQ-------FASRTLP-NRRREKSPVYFTRGRIGDCSSASSSSHAS-PKVHRPKSLDFAVVSANALPAKNAYSYQDDTLDQPPQMEYDDSSSAVSGMNELNYASSSDVPQTPEMPTVQFPGLQSSMLY--------------YEERIYDVPEGIEGIDSMEITAIGPGAMLSPFPPPLPSTQAPPLPLTQPPPLPPHKSQLPHHEPTTFKTF---------RPSHLVPKPMA--ILPPPRNVLPTMSSTESESAISARSAPTPIGGNVEILTQSPRPEPMPELISPPEESDSTAVIESDNVPDPPPEFSGAGIGSAENSQEDTDVDEE 661
            KYF        ++SRTLP  +RREKSP+ FTRG++    S++SSS  + P++ RPKSLDF+V++   LP KNAYSY+DDT+D   Q +++DSSSA+S  NELNYASSSDVP TPE P  + P + ++  +               EERIYD+PEGIE  +    + I       PFPP                          + + T FKT+           S  V   ++  +LPPPR V+  +SSTESESA S  S P  +  + + L+             P E   S A++ES+++P PP        GS   +++DTD++++
Sbjct:  831 KYFSSHISPQPYSSRTLPGKKRREKSPITFTRGKLSVDCSSNSSSSHASPRISRPKSLDFSVIALTDLPRKNAYSYRDDTID---QHDFEDSSSALSAQNELNYASSSDVPPTPENP--ELPMISATRSFNSSLKTNQPCNYKQVEERIYDIPEGIER-ELRSHSPISETYSKKPFPPKY------------------------YMDQTKFKTYLEISGKFSSEDSESVSNRLSFKVLPPPR-VINKVSSTESESAPSNHSVPAAVHFDSDTLSLPLDLLS-----PPMESESSGALVESESLPAPPQ------FGS---NKDDTDIEDD 1115

HSP 2 Score: 65.4698 bits (158), Expect = 6.833e-7
Identity = 73/217 (33.64%), Postives = 110/217 (50.69%), Query Frame = 0 
Query:  843 LPPQLGRSLSRISEQSSSETGPPKPD---------SSEEEHEDTISDPNCPTTNSESENPPSLNSDLPENVPDKDRCFSLPPLTAREVVRECGLELGAEIEFP-SPPSSLMEG-NQTEFTQIEADSMFLEITPPDFEEPTDDVLGAKSLPLESDSAKGSLTKDKIPYDLSISSENNVTKGEDSESSLHDSMEILEEVATVDHFERENQSNAGSEIGD 1048
            L P   R+LSRISE+SS+E+G P+ D         +S  +HE+        TT+ ++EN PS++SDLPEN+        L P  + + V         ++E+  SPPSS +E    TEFTQI+ D++         EE  DD   A+ +  E  ++   +     P   +  S  N     D + SLHDSMEILE+V T+D+F+ E + +    + D
Sbjct: 1496 LGPFHQRTLSRISEKSSNESGSPQSDGPPPPYADNTSVSDHEE-----QNYTTSEDNENAPSISSDLPENMGPH---LELQPNPSFDDV---------QVEYNMSPPSSNIESPKITEFTQIDQDTL---------EEDLDDT-NAEEIKTEERNSPIEIH----PEMSNSISSENNNTNRDLDGSLHDSMEILEDVNTIDYFDNEEKQSYDENVPD 1681
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BLAST of ---NA--- vs. nr
Match: gi|1325253538|ref|XP_023319745.1| (uncharacterized protein LOC111694839 isoform X2 [Eurytemora affinis])

HSP 1 Score: 138.272 bits (347), Expect = 4.256e-29
Identity = 121/330 (36.67%), Postives = 173/330 (52.42%), Query Frame = 0 
Query:  366 KYFQ-------FASRTLP-NRRREKSPVYFTRGRIGDCSSASSSSHAS-PKVHRPKSLDFAVVSANALPAKNAYSYQDDTLDQPPQMEYDDSSSAVSGMNELNYASSSDVPQTPEMPTVQFPGLQSSMLY--------------YEERIYDVPEGIEGIDSMEITAIGPGAMLSPFPPPLPSTQAPPLPLTQPPPLPPHKSQLPHHEPTTFKTF---------RPSHLVPKPMA--ILPPPRNVLPTMSSTESESAISARSAPTPIGGNVEILTQSPRPEPMPELISPPEESDSTAVIESDNVPDPPPEFSGAGIGSAENSQEDTDVDEE 661
            KYF        ++SRTLP  +RREKSP+ FTRG++    S++SSS  + P++ RPKSLDF+V++   LP KNAYSY+DDT+D   Q +++DSSSA+S  NELNYASSSDVP TPE P  + P + ++  +               EERIYD+PEGIE  +    + I       PFPP                          + + T FKT+           S  V   ++  +LPPPR V+  +SSTESESA S  S P  +  + + L+             P E   S A++ES+++P PP        GS   +++DTD++++
Sbjct:  829 KYFSSHISPQPYSSRTLPGKKRREKSPITFTRGKLSVDCSSNSSSSHASPRISRPKSLDFSVIALTDLPRKNAYSYRDDTID---QHDFEDSSSALSAQNELNYASSSDVPPTPENP--ELPMISATRSFNSSLKTNQPCNYKQVEERIYDIPEGIER-ELRSHSPISETYSKKPFPPKY------------------------YMDQTKFKTYLEISGKFSSEDSESVSNRLSFKVLPPPR-VINKVSSTESESAPSNHSVPAAVHFDSDTLSLPLDLLS-----PPMESESSGALVESESLPAPPQ------FGS---NKDDTDIEDD 1113

HSP 2 Score: 65.4698 bits (158), Expect = 7.371e-7
Identity = 73/217 (33.64%), Postives = 110/217 (50.69%), Query Frame = 0 
Query:  843 LPPQLGRSLSRISEQSSSETGPPKPD---------SSEEEHEDTISDPNCPTTNSESENPPSLNSDLPENVPDKDRCFSLPPLTAREVVRECGLELGAEIEFP-SPPSSLMEG-NQTEFTQIEADSMFLEITPPDFEEPTDDVLGAKSLPLESDSAKGSLTKDKIPYDLSISSENNVTKGEDSESSLHDSMEILEEVATVDHFERENQSNAGSEIGD 1048
            L P   R+LSRISE+SS+E+G P+ D         +S  +HE+        TT+ ++EN PS++SDLPEN+        L P  + + V         ++E+  SPPSS +E    TEFTQI+ D++         EE  DD   A+ +  E  ++   +     P   +  S  N     D + SLHDSMEILE+V T+D+F+ E + +    + D
Sbjct: 1494 LGPFHQRTLSRISEKSSNESGSPQSDGPPPPYADNTSVSDHEE-----QNYTTSEDNENAPSISSDLPENMGPH---LELQPNPSFDDV---------QVEYNMSPPSSNIESPKITEFTQIDQDTL---------EEDLDDT-NAEEIKTEERNSPIEIH----PEMSNSISSENNNTNRDLDGSLHDSMEILEDVNTIDYFDNEEKQSYDENVPD 1679
The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1325253533|ref|XP_023319673.1|3.978e-2936.67uncharacterized protein LOC111694839 isoform X1 [E... [more]
gi|1325253538|ref|XP_023319745.1|4.256e-2936.67uncharacterized protein LOC111694839 isoform X2 [E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold85_size395806supercontigscaffold85_size395806:4963..8223 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold85_size395806-processed-gene-0.1-mRNA-1snap_masked-scaffold85_size395806-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold85_size395806:4963..8223-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold85_size395806-processed-gene-0.1 ID=snap_masked-scaffold85_size395806-processed-gene-0.1|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=3261bp|location=Sequence derived from alignment at scaffold85_size395806:4963..8223- (Tigriopus kingsejongensis)
ATGTTCCATGGGGACAAGTCGAAAACCTCCCGTGGCAATCCCGGCTTTCC
TTTTAACCTTCCGGATGAGGATCACGATGTCTACGACCAGTATCACCATC
AGCATCAGTCAGCCAACTCGACCCCGAGGCGGGCCACGATGCAAACCAAC
GCCCTGGGCTATGCTACCATGGGATCGCCGTATGACCGGACCCAGATACG
GTACCATCCCCAGATGCAGGGAACGATGGATCCCAATACTCTTCGACACG
TTGTTCACGGGGAGTTTAGCACGTCCTTGGACAGTGGGGATGGCACCAGC
TGCTCTGGCACTGACAATCGATCCGAGAATACAGTTGTGGAAAAGGAGCA
GAGAGCTGAAATGAGCCGGCGATTGTCCAATCGGAGCAACAACAGTCGCT
CGCAGGTTTCGATTCATTCGGCTCATTCGGGTGGAAGCAACTATTTGACT
CATCCTTTGCACGAGTTCGACCCGACCGGAGAGGATGGGCACATGTCCTC
GGAGGACAACTTGAGTCATGAGTCGTACGAGCTCATCGAGAAGACGGATA
ATGAGAATCACATCGGGGTGGACAATGCGGTTTCCATGCCCCCAATGCCC
AGCATTGCCCCGGATTCGAATCATTTCGAACGAGAGTTCTACCGTCAAGC
TACCGCTCCCAAGGTGGTGCCACCTCAGAGTGACCAAACTAGTGGATCGA
GTAAAATGTCGTTGAACAGTTCTTGCAGTATTGTCACTCCACCCCCACCC
ATGGCTGCCTTACATCATCCTATCTACCAGACGGACGACCTTGAGAGCAT
GTCCTTGATGAAGCCAGTGTTGCGTAGGAAATCGTCCACGCCAAGCGTTA
AAAGCAATTCTCACGGACCAGCAACCCGGGCTGGAGTGGCGAGTAATCTT
ACGCACGATATCGTTCGAGCCCCACCTCAAGGAATGACCAATCAACCCGA
TGACATTCGACAAACCATTACTGCTGCCTCTTACCACCATCCTAGTCATA
CACTGCCTCGAATCATGAACCCCCAGCACGTATGTCGTCGCGTGTCCGCC
CTCGACCCCTTCAACGCACCCTCAACGGCCATCGCGGGGAGTCAGAAATA
TTTCCAATTCGCATCGAGGACCTTGCCAAATCGTCGACGAGAGAAATCTC
CAGTATATTTCACCCGAGGCCGAATTGGAGATTGCTCCTCAGCCTCTTCA
AGCAGCCATGCCTCGCCGAAGGTTCATCGCCCCAAATCCCTGGATTTTGC
AGTCGTGTCGGCCAATGCCCTGCCGGCCAAGAATGCCTACTCTTATCAAG
ATGACACCTTGGACCAGCCACCTCAAATGGAGTACGACGACAGTAGCTCA
GCCGTGAGTGGGATGAATGAGCTCAATTACGCCTCCAGCTCGGATGTCCC
TCAAACCCCAGAAATGCCCACGGTCCAATTCCCGGGACTGCAGTCCAGTA
TGTTGTACTACGAGGAGCGGATCTACGATGTGCCCGAGGGGATCGAAGGT
ATAGACTCCATGGAAATTACGGCCATCGGCCCAGGAGCCATGCTCAGTCC
ATTTCCTCCCCCGCTTCCATCGACTCAGGCTCCCCCGCTTCCATTGACTC
AGCCTCCCCCGCTTCCACCCCACAAATCCCAATTACCACACCATGAGCCC
ACCACCTTCAAGACCTTCCGACCCTCACACTTGGTGCCTAAGCCCATGGC
CATACTTCCACCACCTCGGAACGTTCTCCCGACCATGTCTTCCACCGAGA
GTGAATCGGCCATCTCGGCTAGATCCGCCCCTACGCCCATTGGCGGCAAT
GTGGAGATCCTCACCCAATCTCCGAGACCCGAGCCAATGCCCGAGTTGAT
CTCGCCACCCGAGGAGTCCGACTCCACGGCAGTCATCGAGTCCGACAACG
TCCCAGATCCTCCTCCGGAATTCAGTGGGGCCGGCATTGGCTCGGCGGAG
AACAGCCAAGAGGACACTGACGTGGATGAGGAAGAGGCCACTTTGAGTGG
CTCCAAGCGAATGGAAATCAAAGTGGAGGAATCACCTCCGGGTGAAACTC
CGGAGCATGACTTCACCACGAGCCAGGAAACGGTCCGGAGAAAGGACACC
AAGGACGTGTCGCCCAATAAGGACGACGAGGAGACGACCATGAATTGCAG
CATGGATCCCATGGATGACTTCGGCTCGTCGGTGGTCACCCTCAACAGTC
TGCCCACGGTTTGCGGGGAAGACGACGAGAGCACTGATCCCCACGAGGTT
GTCAGAATCGCCGAGATGTATGTCCGACTTGGAAACGGCTCCACCATCTC
GTCAAATGGTGGGGAATCGGATAGTGTTCCCTACATTGATGATGAATTCA
ACAGCTCTTCGAGCGAGAAGCCAGGGAAAGGCCGTGTTGCCGAGGCAAGA
GCCAAGGGCCGCAAGCTCATGATCCCGCAACACTCGAGCGACGACAAGAG
CAGCGACGGAAGTCTAGATATTGCCACCATTCCCCCTCCCTCCAATGCCC
AGCCGATTGAGCCCATGCCCATGGAGCTTCCACCTCAGCTCGGACGGTCC
CTCTCCAGGATTAGCGAGCAGAGCTCCAGCGAGACGGGACCACCCAAGCC
GGACTCCTCGGAGGAGGAGCACGAGGACACAATCAGTGATCCCAATTGTC
CCACGACCAACAGTGAGAGCGAGAACCCGCCCTCTCTCAACTCGGATCTG
CCGGAGAACGTGCCGGACAAGGATCGATGCTTCTCACTGCCACCCCTTAC
CGCCCGCGAAGTGGTCCGCGAATGTGGGCTGGAACTGGGGGCGGAAATTG
AGTTCCCCTCCCCTCCCAGCTCTTTGATGGAGGGCAATCAGACTGAATTC
ACTCAGATTGAGGCTGACAGCATGTTCCTGGAAATCACGCCCCCCGACTT
CGAGGAGCCAACTGATGATGTCCTTGGAGCTAAGTCGCTTCCCCTCGAAA
GCGATTCCGCCAAAGGATCCCTGACCAAAGACAAAATCCCCTACGACCTC
TCCATCAGCAGCGAGAACAATGTGACCAAGGGCGAGGACTCTGAATCCTC
GCTCCACGACTCCATGGAGATCCTGGAGGAGGTGGCCACCGTGGACCACT
TTGAACGCGAGAACCAATCCAATGCCGGCTCGGAGATCGGGGATGACACT
CAGGATCTCTTCGAAATGCCTCCACTGCCCTCGGTGATTCCTGTGGACGA
GAGCGAGTCGTCCCAAGAAACTGTTCTCGAGCCAATGTATACGGAGGAAA
TCATGTTCTAG
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Synonyms
The feature '---NA---' has the following synonyms
Synonym
Tk03909
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