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Associated RNAi Experiments
Homology
BLAST of MULTISPECIES: hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000013017 (supercontig:LSalAtl2s:LSalAtl2s995:39034:39873:-1 gene:EMLSAG00000013017 transcript:EMLSAT00000013017 description:"maker-LSalAtl2s995-snap-gene-0.40") HSP 1 Score: 73.1738 bits (178), Expect = 1.931e-15 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0
Query: 129 CERRDCYISCRLNLLGGGRCTSGGCMCYFNYLN-YDGAPMQARYPDDNIWYELDSDDKAMILDAMR 193
C+ ++CY+ CRL LLGGG CT GGCMCY + +N Y G P+ D+IWYEL +K I A++
Sbjct: 114 CQGKNCYLKCRLELLGGGECTIGGCMCYNSQINHYTGEPIMFTRESDHIWYELSGREKDSIASALQ 179
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold865_size87005 | supercontig | scaffold865_size87005:39430..44042 + |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold865_size87005:39430..44042+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold865_size87005-processed-gene-0.0 ID=snap_masked-scaffold865_size87005-processed-gene-0.0|Name=MULTISPECIES: hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=4613bp|location=Sequence derived from alignment at scaffold865_size87005:39430..44042+ (Tigriopus kingsejongensis)
ATGAGTGCCTCCGATTTCGACTCAAGAATGACACGTTTGTCGTAATAAAT
TCTATAGGATCGAAATAACACTCTCGAGTCTCGGGCAGGAGCTTGTACTC
CGGATGTAGGCTCAGAGTGCGAAAATATATCACTTGGTACCAAAGGACAA
ACAGAAACAACTGCAAGACATGCCAGATCTAGATGCACCTAGGGCGCTCT
ATAACCATCGGTTATAACCATGGTTATTGAGCGACCTGGATGCAGCCAAA
GAGGGAACTTCGTTTGGAAACTATCCGACAGGATAATAGATAATTTATTC
ATTGTTAAATCATTCACTTGGTACTTTTATATGCCTTGGAGAAAAAAACA
TAGCCATTAAACATACAGTATGTTTAAATAGCTCCAAGTAAACACGAGCC
TTGACTCTAATTGTAAAATGTTGACCGCTAATTTTGATGTTCATGGAGAT
TTCTGGCCTCTCAAACATCTAGTCGTCGAGGAGCGTCGTTCACAAATATA
GGATGCCAATGTCAGTTGGGAAAATTTGCAGATACAGCTTAATCCGTAAG
AATGAAAGACGATGGTGCCAGAATGACGCAAACCACCTTAGGGTGGGGAA
CTTATGCCTTCGCCTGATCTTCATAGTGAAAGCTCGGAGAAAACTTGGCA
AGAATGCCCACAGAAAAGAAAGATGCTCCTCTGCGTTTTTGAGGCGATTG
CTTTCTTCACCTGATGAAGTCAGTACTTGTACGTACGTATGAAAATACGT
ATTCATGAGTGCTGGAACGAGCCACAGTCAAGGCTGCATGGGGGAAAATG
AAAACTGTCATATGATGGAGTGAGCGCGTGTACTTCCAGATCCTGTGGAA
AATATTCCTGATTATCTCCGCGCTGATAACACGATACATCGTTGCGGAAT
TTAATTTTTGTATTTACGTACACCGGCTGTCCATGAGTCGTTCCGTGGAC
CTTGGGATATCCAATAAAGCAGCCCTTGGTCTATCTAAAGATAAAAAGAG
TTCCCAAAACAACAGCAACACAGCGATTGCCACTGCAAAAGATTCACCCT
ATTTTAAAAACCTCTTAACAAAAAGGTGCCACAATTTCTACTGAATACCT
CACGACTAGTGCTTCCATAATCGCTAACCGGTATTCGCTAGTCGTCGAAG
ATTTAGTGATGAACTATCACTAATCGATAATCGATAATTTTGATGCGACC
AGCTTTCGAAACTTTCGAGACTGCGCGATTGATATTAAAAATTCAAGCTT
TTTTGACGATTTGTCAGTTTTAATCTGATATTTATCAAGGTTTTCCATTT
TTTTCAAGTTTTCATACATTTCATTTTACGTCGATGATGAAATGTAAGTT
TTTTTAGGGCTATTTACGCCCACGTTTTCACTTCTCTAGTAATGTTTGGC
AGAAAAAAAAACATTTTCATGAATTTTTCAAATGTTTCAAATTTTACGAT
TTTCTCAAGATACTCTCTATAAGCAGATAATAGGGGGGTGAGTGTGGCAC
AAATGCAAGACACTCTCCTGGAGACTACGAGAACCTCAGTTCGCATCGAT
CAGAAAATCCGTCATTGAAAGAAATATGAATATTCTGACTTTTCTGACCA
TTATGGCCATGGCGTCCCTGAAAAATGGGCATTGATTTGTACTTAATAAA
ATCTCAGACATTGGCAGAAAAAATGCAAATTTAGTCCTCCCATTAAAAGC
TAGACAGTTATTGTTGGATACGTGGAACAAAGCGAGACGTGGACGCTTGG
TTCAAGATCGAAACCGTAACTGTCGTATATTTCAGCTGTGAGCAAAGGGA
GCATGCGGGCAAAGCCGTCCTGCGAGCAATGCGAGTAATCGGGATACAAC
AGTTATGATTCAAAGTGTCCATTTTTTAATGCAATTAAAAGGCGGTAAAT
GGAGTTCTGTCAGGTAGCTTTTTTGACATCAGACCACACATGGGCAAAAA
CAATTTGTTCTTGTTCTGCAATTTTCCATCGCTTTTTTCGAAACCTACCA
ATTATGCTATCCTCTTTTCGATGTGAACTTCCTATGTACTTTCTTTTTGA
TTTAAGAACGCTCCCATTTTTCACAAAATCTTCGATAGTCGACGAACTAT
TGCTGACTTTTTCTGAGAATAATGGTCAATCGCTAATTCAAATTAGCGAT
AATTTTGGAAACTCTACTATGTCACATCCACCTTGCATTACTAGCTCCAA
AAAGGGACAATTTATTCGAATGACAATGAGCAAATTAGGTTTTCCAAATC
AAATGTTCAGGCTAGGTCAACACTAGGCAGTGAAATAGGATTTCAATGAG
AACACATTTTGCACCTTTTAGGTTGGAAACAACTTGAAATCACTTTTAAG
CACGTTTCACATTGAAAAAAAGGATGTTGGTAGAATATTTCCCATTTATT
ATTGATTTGATTTTGACTGAGTGACAGAGCTTGTCCCTAGCCCTCGATAA
ACAAAATTCTTCCCTTTTGTTACCGTTTTTTTCTTGCTGATTTGTCAACG
ATCATGGCTCCATTTTTTTCGGGGACTCGGGCATTTTTGAAGTCTTTCAG
ACTTTTAAACAGTTTTTCTTGGATAAAACGAGAGACAGTCAAGCTAACAC
TGTCCTATTTTACTGAAGTCGATTATAATATTTCTTTTTATTTGAGGGTC
AACGGAACATGCTCATGAAAAAAACAAAAAAACACAGAGCTTATGCATTG
GACGGTCCTGGCTAAAAGGCAACTTGTACAATGGCAAAGTTTCTTAGAGG
TGTTCTGTGAAACGTGGCCGATCTGAGTTTCATCATGCCTATTCAAAACA
TCAAGCCAACTGCTTCAAGTGCCCAATTCCCAAGTATCCCAGAACATTCG
AGGATTGATGATTTGGAATGAATTTGAATCGCAGCTGCCGTTTGAACTTT
GCACACTTCGAGGTGAAAGGTCAAGACTATAACGTTTCAAGTCTCCTTCT
GTAGCACACCCGGGGACTGAATAAAATACTTCCGACGCGAATGGAATGGG
AAAGGCCGAATGGACCCCATTGTCCTTTCAGCTCGAATGTCACTCTCGAG
AGTCGTATGCAATTCATACTGTATGGCCAACAACGAGTGGTCATGTACAG
TATGTACTCGTAGGTACGAGTCGATACATGTTGATCCGGCTGAACCGCCT
CAAAAAGTGAAAACGCAGGGATTACGCAAATAACGAACATTAGATCAATG
ACTCCACGACGACCCTTGGCGAATCTTTGTTTTCACTGGGGGAGCTTATA
ACGACACAAAAGCTTATCGCGTGAATTCGTGAGCTCATGATGTGTATGTT
GAATGAGGAAGATACTCGCCACTACCCCTTAAGGACTCTCATAGGCACAC
GTTTGACTTTACCGACAATTGATATCGATTTTCCAGAATCAATGCCAAAT
TGGGTCACTTGTGTGCAAACGAACATGAATCTTGCTAGGAGATAAAAATT
GTCGCCGTTTGGCATGCGAGAGCAACGTACGGAGTACTGCCTCAAGTCTC
TCAGTATTACCTCAACCCGCTGAGGTGAGGGATTGTGCTAACAAGCGACG
AGACAGAAGCCCAAGATCATGGTTGGTCTTTTTAGCTCTGTGACTTTGGT
CTGTCTGCTGGCAGTGCTTCCTGGAGGTAATTTTTCTACCCTTTGCCATT
CAGGCCCAGGTTAAGCGTCGAAAAGTAAAGGATATACTTTGCTTTTTAGG
GCAAGCTGAGGCCTACAACGGATATCCCAATTATTGGAGAGGACCTCCGA
ATGCACGCTACAACTGGAATCAGCAGCCGCTAATTGGGCAGCCCGTTTGG
AGGTCGCAATGGGTCCCCATGCGAAATTTGGGAGCCATGTCCGGTGACAG
ACTACCCATGTACGCCTTTGCTGCCCCCGACAGCCGTATGGACATGGAGG
CCGTGGCCCGCCAATACTATCCTCAATTGTTTCGGCCCAAACCCAGTCTA
TCCTACGGATCAGAGCCCGTGATCGATTTAACCTCAGCCATCAATCGTCA
AAGGGCTCTCGGATCCCAGAGACAACCCATTACGCAGATCTTAGCCACAT
GTGAGAGGCGTGATTGCTACATTTCTTGCCGGCTCAACCTACTGGGTGGG
GGCCGCTGTACTTCTGGAGGCTGCATGTGCTACTTCAATTACCTTAACTA
CGACGGAGCGCCGATGCAGGCTCGCTATCCGGATGATAACATTTGGTACG
AACTGGATAGCGACGACAAGGCCATGATTTTGGATGCAATGCGAGAGGGC
AAGAGAGGTCCCCCACACCATGGCTCGGATGGCAATGGTCACGACGATAA
CCCTGTGACTGGTCGACCGTCATACGGCCAGAGGACCACAACCGGGTGGT
ACGGCGACAATGTGGCAACCAAGCCACCCTATCAAACCACCCAAGGCTGG
GGTGGAGGGTGGGCCCCCGAGGCAACCTTCCCTCCAGCCACGGCACGGCC
AACGGCCGGGGGTAATTGGTGGGGATCGGGAGACAACGAAGTCCCCAAGG
CCACGAACCGGCCTCCATATGTTGAGGTTGAGAATAGTGGTGGGAGCTTC
TTCGACACGAGTGGAGATGATGACGACGACGACAATACTCTCGGTGACGA
ATGGGATTTCTAG back to top
Synonyms
The feature 'MULTISPECIES: hypothetical protein' has the following synonyms
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